EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000056310 (Gene tree)
Gene ID: 100929
Gene Symbol: Tyw1
Alias: Rsafd1
Full Name: tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 85945 bases
Position: chr5:130255619-130341563
Accession: 2141161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000037173	Wyosine_form	PF08608.12	3e-26	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000040213	-	3044	XM_006504331	ENSMUSP00000037173	721 (aa)	XP_006504394	Q8BJM7
ENSMUST00000147619	-	771	-	ENSMUSP00000123693	234 (aa)	-	F6VNP0
ENSMUST00000100662	-	1867	-	ENSMUSP00000098226	386 (aa)	-	Q8BJM7
ENSMUST00000173375	-	4698	-	-	- (aa)	-	-
ENSMUST00000044204	-	4698	-	ENSMUSP00000047318	454 (aa)	-	A0A0R4J0L2

Gene Model

Click here to download ENSMUSG00000056310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000056310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000056310	Tyw1	99	71.567	ENSG00000277149	TYW1B	99	71.567	Homo_sapiens
ENSMUSG00000056310	Tyw1	99	80.743	ENSG00000198874	TYW1	99	80.743	Homo_sapiens
ENSMUSG00000056310	Tyw1	98	66.898	ENSAPOG00000014391	tyw1	100	63.380	Acanthochromis_polyacanthus
ENSMUSG00000056310	Tyw1	98	65.594	ENSACIG00000007325	tyw1	99	64.706	Amphilophus_citrinellus
ENSMUSG00000056310	Tyw1	98	66.528	ENSAOCG00000016792	tyw1	96	66.389	Amphiprion_ocellaris
ENSMUSG00000056310	Tyw1	98	66.528	ENSAPEG00000015939	tyw1	99	67.216	Amphiprion_percula
ENSMUSG00000056310	Tyw1	90	65.303	ENSATEG00000006856	tyw1	91	65.046	Anabas_testudineus
ENSMUSG00000056310	Tyw1	100	78.689	ENSANAG00000037051	-	100	78.689	Aotus_nancymaae
ENSMUSG00000056310	Tyw1	99	67.358	ENSACLG00000018688	tyw1	96	66.898	Astatotilapia_calliptera
ENSMUSG00000056310	Tyw1	98	67.782	ENSAMXG00000004157	tyw1	98	67.782	Astyanax_mexicanus
ENSMUSG00000056310	Tyw1	100	78.933	ENSBTAG00000008446	TYW1	100	78.933	Bos_taurus
ENSMUSG00000056310	Tyw1	100	78.552	ENSCJAG00000004295	-	100	78.552	Callithrix_jacchus
ENSMUSG00000056310	Tyw1	100	76.975	ENSCAFG00000010867	-	100	76.599	Canis_familiaris
ENSMUSG00000056310	Tyw1	99	69.028	ENSCAFG00020005367	-	99	71.367	Canis_lupus_dingo
ENSMUSG00000056310	Tyw1	100	80.027	ENSCHIG00000019510	-	100	80.027	Capra_hircus
ENSMUSG00000056310	Tyw1	90	80.395	ENSTSYG00000008236	-	100	80.395	Carlito_syrichta
ENSMUSG00000056310	Tyw1	88	74.057	ENSCAPG00000013569	-	100	74.057	Cavia_aperea
ENSMUSG00000056310	Tyw1	99	76.113	ENSCPOG00000011182	-	99	77.038	Cavia_porcellus
ENSMUSG00000056310	Tyw1	100	78.825	ENSCCAG00000026643	-	100	78.825	Cebus_capucinus
ENSMUSG00000056310	Tyw1	100	80.055	ENSCATG00000043677	-	100	80.055	Cercocebus_atys
ENSMUSG00000056310	Tyw1	99	78.005	ENSCLAG00000006321	-	99	78.005	Chinchilla_lanigera
ENSMUSG00000056310	Tyw1	99	69.061	ENSCSAG00000018274	-	99	69.061	Chlorocebus_sabaeus
ENSMUSG00000056310	Tyw1	67	89.744	ENSCHOG00000003801	-	75	89.744	Choloepus_hoffmanni
ENSMUSG00000056310	Tyw1	99	70.492	ENSCPBG00000014896	-	96	74.954	Chrysemys_picta_bellii
ENSMUSG00000056310	Tyw1	81	58.234	ENSCING00000004125	-	97	58.574	Ciona_intestinalis
ENSMUSG00000056310	Tyw1	89	54.308	ENSCSAVG00000005712	-	100	54.923	Ciona_savignyi
ENSMUSG00000056310	Tyw1	100	80.055	ENSCANG00000033209	-	100	80.055	Colobus_angolensis_palliatus
ENSMUSG00000056310	Tyw1	71	93.303	ENSCGRG00001003679	Tyw1	88	93.303	Cricetulus_griseus_chok1gshd
ENSMUSG00000056310	Tyw1	98	66.620	ENSCSEG00000005810	tyw1	94	66.620	Cynoglossus_semilaevis
ENSMUSG00000056310	Tyw1	90	65.138	ENSCVAG00000001054	tyw1	92	65.596	Cyprinodon_variegatus
ENSMUSG00000056310	Tyw1	98	67.867	ENSDARG00000062987	tyw1	96	67.213	Danio_rerio
ENSMUSG00000056310	Tyw1	99	80.330	ENSDNOG00000024165	-	99	79.917	Dasypus_novemcinctus
ENSMUSG00000056310	Tyw1	99	67.220	ENSDORG00000014772	Tyw1	99	67.358	Dipodomys_ordii
ENSMUSG00000056310	Tyw1	51	53.388	ENSETEG00000009904	-	83	53.388	Echinops_telfairi
ENSMUSG00000056310	Tyw1	60	70.833	ENSEBUG00000004494	tyw1	91	70.833	Eptatretus_burgeri
ENSMUSG00000056310	Tyw1	100	79.452	ENSEASG00005008818	-	100	79.452	Equus_asinus_asinus
ENSMUSG00000056310	Tyw1	100	70.330	ENSECAG00000023164	-	100	71.016	Equus_caballus
ENSMUSG00000056310	Tyw1	62	89.796	ENSEEUG00000005950	-	62	89.796	Erinaceus_europaeus
ENSMUSG00000056310	Tyw1	99	65.536	ENSELUG00000008449	tyw1	98	65.868	Esox_lucius
ENSMUSG00000056310	Tyw1	100	76.839	ENSFCAG00000014262	-	100	75.918	Felis_catus
ENSMUSG00000056310	Tyw1	99	66.027	ENSFALG00000013810	-	100	66.027	Ficedula_albicollis
ENSMUSG00000056310	Tyw1	99	76.712	ENSFDAG00000013270	-	99	76.712	Fukomys_damarensis
ENSMUSG00000056310	Tyw1	84	67.045	ENSFHEG00000020824	tyw1	81	67.045	Fundulus_heteroclitus
ENSMUSG00000056310	Tyw1	99	66.847	ENSGALG00000001110	-	99	68.529	Gallus_gallus
ENSMUSG00000056310	Tyw1	99	65.797	ENSGACG00000012692	tyw1	99	64.898	Gasterosteus_aculeatus
ENSMUSG00000056310	Tyw1	98	69.986	ENSGAGG00000022393	-	98	69.986	Gopherus_agassizii
ENSMUSG00000056310	Tyw1	89	72.018	ENSGGOG00000001473	TYW1	99	72.018	Gorilla_gorilla
ENSMUSG00000056310	Tyw1	99	67.220	ENSHBUG00000002640	tyw1	96	66.759	Haplochromis_burtoni
ENSMUSG00000056310	Tyw1	88	75.938	ENSHGLG00000012093	-	100	75.938	Heterocephalus_glaber_female
ENSMUSG00000056310	Tyw1	100	78.386	ENSHGLG00100011743	TYW1	100	78.386	Heterocephalus_glaber_male
ENSMUSG00000056310	Tyw1	98	61.003	ENSHCOG00000019949	tyw1	96	61.003	Hippocampus_comes
ENSMUSG00000056310	Tyw1	98	66.066	ENSIPUG00000016330	tyw1	95	66.342	Ictalurus_punctatus
ENSMUSG00000056310	Tyw1	99	77.885	ENSSTOG00000004067	-	91	78.709	Ictidomys_tridecemlineatus
ENSMUSG00000056310	Tyw1	99	81.768	ENSJJAG00000022959	Tyw1	99	83.149	Jaculus_jaculus
ENSMUSG00000056310	Tyw1	98	65.833	ENSKMAG00000018599	tyw1	96	66.250	Kryptolebias_marmoratus
ENSMUSG00000056310	Tyw1	98	65.199	ENSLACG00000018917	tyw1	96	65.199	Latimeria_chalumnae
ENSMUSG00000056310	Tyw1	99	67.773	ENSLOCG00000004035	tyw1	95	67.406	Lepisosteus_oculatus
ENSMUSG00000056310	Tyw1	100	80.328	ENSMFAG00000035457	-	100	80.328	Macaca_fascicularis
ENSMUSG00000056310	Tyw1	100	80.328	ENSMMUG00000030374	-	100	80.328	Macaca_mulatta
ENSMUSG00000056310	Tyw1	100	80.464	ENSMNEG00000041992	-	100	80.464	Macaca_nemestrina
ENSMUSG00000056310	Tyw1	100	80.055	ENSMLEG00000039741	-	100	80.055	Mandrillus_leucophaeus
ENSMUSG00000056310	Tyw1	98	67.316	ENSMAMG00000016089	tyw1	94	67.316	Mastacembelus_armatus
ENSMUSG00000056310	Tyw1	92	71.021	ENSMZEG00005024386	tyw1	97	70.571	Maylandia_zebra
ENSMUSG00000056310	Tyw1	99	68.529	ENSMGAG00000002176	-	99	68.529	Meleagris_gallopavo
ENSMUSG00000056310	Tyw1	99	90.569	ENSMAUG00000002959	Tyw1	99	90.569	Mesocricetus_auratus
ENSMUSG00000056310	Tyw1	99	80.303	ENSMICG00000014374	-	100	80.303	Microcebus_murinus
ENSMUSG00000056310	Tyw1	99	87.535	ENSMOCG00000017720	Tyw1	99	87.812	Microtus_ochrogaster
ENSMUSG00000056310	Tyw1	98	62.676	ENSMMOG00000005064	tyw1	97	62.853	Mola_mola
ENSMUSG00000056310	Tyw1	99	70.259	ENSMODG00000025697	-	99	70.476	Monodelphis_domestica
ENSMUSG00000056310	Tyw1	99	67.452	ENSMALG00000010238	tyw1	96	67.452	Monopterus_albus
ENSMUSG00000056310	Tyw1	100	98.890	MGP_CAROLIEiJ_G0027801	Tyw1	100	98.890	Mus_caroli
ENSMUSG00000056310	Tyw1	100	93.759	MGP_PahariEiJ_G0024383	Tyw1	100	93.759	Mus_pahari
ENSMUSG00000056310	Tyw1	100	99.307	MGP_SPRETEiJ_G0028799	Tyw1	100	99.307	Mus_spretus
ENSMUSG00000056310	Tyw1	95	76.488	ENSMPUG00000016191	-	99	75.362	Mustela_putorius_furo
ENSMUSG00000056310	Tyw1	99	76.164	ENSMLUG00000013582	-	99	76.164	Myotis_lucifugus
ENSMUSG00000056310	Tyw1	99	82.133	ENSNGAG00000002742	Tyw1	99	81.302	Nannospalax_galili
ENSMUSG00000056310	Tyw1	96	65.759	ENSNBRG00000016996	tyw1	99	65.759	Neolamprologus_brichardi
ENSMUSG00000056310	Tyw1	99	78.709	ENSNLEG00000013210	-	98	78.709	Nomascus_leucogenys
ENSMUSG00000056310	Tyw1	92	62.519	ENSOPRG00000008734	-	88	62.519	Ochotona_princeps
ENSMUSG00000056310	Tyw1	99	70.833	ENSODEG00000014729	-	99	71.389	Octodon_degus
ENSMUSG00000056310	Tyw1	99	68.194	ENSONIG00000005872	tyw1	96	67.733	Oreochromis_niloticus
ENSMUSG00000056310	Tyw1	99	78.571	ENSOCUG00000003173	-	99	78.709	Oryctolagus_cuniculus
ENSMUSG00000056310	Tyw1	98	66.990	ENSORLG00000001393	tyw1	98	64.993	Oryzias_latipes
ENSMUSG00000056310	Tyw1	98	67.129	ENSORLG00020019361	tyw1	98	65.272	Oryzias_latipes_hni
ENSMUSG00000056310	Tyw1	98	66.759	ENSORLG00015008095	tyw1	95	65.651	Oryzias_latipes_hsok
ENSMUSG00000056310	Tyw1	94	81.871	ENSOGAG00000016555	-	99	79.310	Otolemur_garnettii
ENSMUSG00000056310	Tyw1	100	78.940	ENSOARG00000010673	-	100	78.940	Ovis_aries
ENSMUSG00000056310	Tyw1	100	77.503	ENSPPRG00000004945	-	100	76.575	Panthera_pardus
ENSMUSG00000056310	Tyw1	100	77.641	ENSPTIG00000019545	-	100	76.712	Panthera_tigris_altaica
ENSMUSG00000056310	Tyw1	99	74.829	ENSPTRG00000023076	TYW1B	98	74.829	Pan_troglodytes
ENSMUSG00000056310	Tyw1	100	80.055	ENSPANG00000019053	-	100	80.055	Papio_anubis
ENSMUSG00000056310	Tyw1	99	66.390	ENSPKIG00000006545	tyw1	96	66.390	Paramormyrops_kingsleyae
ENSMUSG00000056310	Tyw1	96	65.385	ENSPMGG00000004240	tyw1	99	64.356	Periophthalmus_magnuspinnatus
ENSMUSG00000056310	Tyw1	100	89.641	ENSPEMG00000008274	Tyw1	100	89.641	Peromyscus_maniculatus_bairdii
ENSMUSG00000056310	Tyw1	98	67.967	ENSPFOG00000015855	tyw1	98	67.967	Poecilia_formosa
ENSMUSG00000056310	Tyw1	98	66.804	ENSPLAG00000000838	tyw1	95	80.628	Poecilia_latipinna
ENSMUSG00000056310	Tyw1	98	66.989	ENSPMEG00000019437	tyw1	100	64.196	Poecilia_mexicana
ENSMUSG00000056310	Tyw1	98	64.575	ENSPREG00000018773	tyw1	96	64.714	Poecilia_reticulata
ENSMUSG00000056310	Tyw1	100	80.464	ENSPPYG00000017514	TYW1	100	80.464	Pongo_abelii
ENSMUSG00000056310	Tyw1	99	63.874	ENSPCOG00000015294	-	96	71.739	Propithecus_coquereli
ENSMUSG00000056310	Tyw1	99	67.358	ENSPNYG00000022381	tyw1	96	66.898	Pundamilia_nyererei
ENSMUSG00000056310	Tyw1	98	68.245	ENSPNAG00000009001	tyw1	98	68.106	Pygocentrus_nattereri
ENSMUSG00000056310	Tyw1	99	93.620	ENSRNOG00000024352	Tyw1	99	93.620	Rattus_norvegicus
ENSMUSG00000056310	Tyw1	100	79.918	ENSRBIG00000039619	-	100	79.918	Rhinopithecus_bieti
ENSMUSG00000056310	Tyw1	99	80.357	ENSRROG00000039780	-	99	80.357	Rhinopithecus_roxellana
ENSMUSG00000056310	Tyw1	94	40.896	YPL207W	-	66	56.452	Saccharomyces_cerevisiae
ENSMUSG00000056310	Tyw1	100	78.279	ENSSBOG00000025873	-	100	78.279	Saimiri_boliviensis_boliviensis
ENSMUSG00000056310	Tyw1	99	70.628	ENSSHAG00000010346	-	100	71.607	Sarcophilus_harrisii
ENSMUSG00000056310	Tyw1	98	68.671	ENSSFOG00015001054	tyw1	99	67.988	Scleropages_formosus
ENSMUSG00000056310	Tyw1	99	65.881	ENSSMAG00000020514	tyw1	96	65.881	Scophthalmus_maximus
ENSMUSG00000056310	Tyw1	99	66.943	ENSSDUG00000001552	tyw1	94	70.015	Seriola_dumerili
ENSMUSG00000056310	Tyw1	99	67.082	ENSSLDG00000003554	tyw1	96	66.713	Seriola_lalandi_dorsalis
ENSMUSG00000056310	Tyw1	99	67.945	ENSSPUG00000002715	-	99	68.767	Sphenodon_punctatus
ENSMUSG00000056310	Tyw1	100	78.630	ENSSSCG00000007733	-	100	78.630	Sus_scrofa
ENSMUSG00000056310	Tyw1	90	67.171	ENSTGUG00000003428	-	99	67.171	Taeniopygia_guttata
ENSMUSG00000056310	Tyw1	98	66.111	ENSTRUG00000016107	tyw1	93	65.833	Takifugu_rubripes
ENSMUSG00000056310	Tyw1	91	71.514	ENSTNIG00000018999	tyw1	100	71.364	Tetraodon_nigroviridis
ENSMUSG00000056310	Tyw1	100	77.248	ENSUMAG00000015343	-	100	76.327	Ursus_maritimus
ENSMUSG00000056310	Tyw1	99	76.849	ENSVVUG00000016457	-	99	76.471	Vulpes_vulpes
ENSMUSG00000056310	Tyw1	99	67.989	ENSXETG00000010094	tyw1	99	67.989	Xenopus_tropicalis
ENSMUSG00000056310	Tyw1	98	67.455	ENSXMAG00000013125	tyw1	99	66.616	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0008033	tRNA processing	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0010181	FMN binding	-	IEA	Function
GO:0016829	lyase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051536	iron-sulfur cluster binding	-	IEA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process