EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000044763 (Gene tree)
Gene ID: 52575
Gene Symbol: Trmt10c
Alias: 1300018J16Rik|D16Ertd454e|Rg9mtd1
Full Name: tRNA methyltransferase 10C
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 5211 bases
Position: chr16:56032609-56037819
Accession: 1196261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000058954	tRNA_m1G_MT	PF01746.21	1.2e-43	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000059052	-	3002	-	ENSMUSP00000058954	414 (aa)	-	Q3UFY8

Gene Model

Click here to download ENSMUSG00000044763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000044763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000044763	Trmt10c	96	76.942	ENSG00000174173	TRMT10C	99	76.942	Homo_sapiens
ENSMUSG00000044763	Trmt10c	57	30.417	ENSG00000165275	TRMT10B	84	31.183	Homo_sapiens
ENSMUSG00000044763	Trmt10c	61	51.550	ENSAPOG00000003883	trmt10c	74	51.550	Acanthochromis_polyacanthus
ENSMUSG00000044763	Trmt10c	98	75.743	ENSAMEG00000019657	TRMT10C	98	75.743	Ailuropoda_melanoleuca
ENSMUSG00000044763	Trmt10c	54	30.837	ENSAOCG00000001205	trmt10b	72	30.837	Amphiprion_ocellaris
ENSMUSG00000044763	Trmt10c	56	55.794	ENSAOCG00000005855	trmt10c	70	53.909	Amphiprion_ocellaris
ENSMUSG00000044763	Trmt10c	56	56.223	ENSAPEG00000021992	trmt10c	70	54.321	Amphiprion_percula
ENSMUSG00000044763	Trmt10c	89	49.333	ENSATEG00000012576	trmt10c	94	48.267	Anabas_testudineus
ENSMUSG00000044763	Trmt10c	80	54.079	ENSAPLG00000011561	TRMT10C	83	52.976	Anas_platyrhynchos
ENSMUSG00000044763	Trmt10c	81	54.971	ENSACAG00000011903	TRMT10C	78	54.942	Anolis_carolinensis
ENSMUSG00000044763	Trmt10c	59	30.588	ENSACLG00000013678	trmt10b	64	32.020	Astatotilapia_calliptera
ENSMUSG00000044763	Trmt10c	97	44.552	ENSACLG00000024269	trmt10c	97	45.278	Astatotilapia_calliptera
ENSMUSG00000044763	Trmt10c	83	49.003	ENSAMXG00000014749	trmt10c	83	49.288	Astyanax_mexicanus
ENSMUSG00000044763	Trmt10c	99	74.572	ENSBTAG00000024027	TRMT10C	97	74.572	Bos_taurus
ENSMUSG00000044763	Trmt10c	100	71.566	ENSCAFG00000031607	TRMT10C	98	71.566	Canis_familiaris
ENSMUSG00000044763	Trmt10c	100	71.566	ENSCAFG00020008862	TRMT10C	98	71.566	Canis_lupus_dingo
ENSMUSG00000044763	Trmt10c	99	74.572	ENSCHIG00000021446	TRMT10C	96	74.572	Capra_hircus
ENSMUSG00000044763	Trmt10c	57	30.000	ENSCATG00000032196	TRMT10B	84	30.645	Cercocebus_atys
ENSMUSG00000044763	Trmt10c	99	73.608	ENSCLAG00000017738	TRMT10C	98	73.608	Chinchilla_lanigera
ENSMUSG00000044763	Trmt10c	96	78.947	ENSCSAG00000018722	TRMT10C	99	78.947	Chlorocebus_sabaeus
ENSMUSG00000044763	Trmt10c	92	74.869	ENSCHOG00000010108	TRMT10C	98	75.393	Choloepus_hoffmanni
ENSMUSG00000044763	Trmt10c	100	78.554	ENSCGRG00001006603	Trmt10c	100	78.554	Cricetulus_griseus_chok1gshd
ENSMUSG00000044763	Trmt10c	100	78.554	ENSCGRG00000019728	Trmt10c	100	78.554	Cricetulus_griseus_crigri
ENSMUSG00000044763	Trmt10c	88	45.220	ENSCSEG00000006163	trmt10c	77	46.134	Cynoglossus_semilaevis
ENSMUSG00000044763	Trmt10c	50	33.953	ENSCVAG00000014204	trmt10b	64	33.953	Cyprinodon_variegatus
ENSMUSG00000044763	Trmt10c	82	47.814	ENSCVAG00000013751	trmt10c	72	46.556	Cyprinodon_variegatus
ENSMUSG00000044763	Trmt10c	54	30.702	ENSDARG00000060176	trmt10b	71	30.531	Danio_rerio
ENSMUSG00000044763	Trmt10c	81	48.547	ENSDARG00000041575	trmt10c	85	48.415	Danio_rerio
ENSMUSG00000044763	Trmt10c	100	71.014	ENSDNOG00000012650	TRMT10C	99	71.014	Dasypus_novemcinctus
ENSMUSG00000044763	Trmt10c	99	75.306	ENSDORG00000027529	Trmt10c	100	74.638	Dipodomys_ordii
ENSMUSG00000044763	Trmt10c	74	35.514	FBgn0034351	rswl	71	35.514	Drosophila_melanogaster
ENSMUSG00000044763	Trmt10c	77	35.220	ENSEBUG00000015332	trmt10c	75	34.277	Eptatretus_burgeri
ENSMUSG00000044763	Trmt10c	100	79.036	ENSEASG00005011186	TRMT10C	99	79.036	Equus_asinus_asinus
ENSMUSG00000044763	Trmt10c	100	79.277	ENSECAG00000001533	TRMT10C	99	79.277	Equus_caballus
ENSMUSG00000044763	Trmt10c	96	71.322	ENSEEUG00000004696	TRMT10C	99	71.322	Erinaceus_europaeus
ENSMUSG00000044763	Trmt10c	87	50.535	ENSELUG00000002553	trmt10c	87	50.802	Esox_lucius
ENSMUSG00000044763	Trmt10c	98	75.980	ENSFCAG00000003430	TRMT10C	96	75.980	Felis_catus
ENSMUSG00000044763	Trmt10c	86	52.793	ENSFALG00000014236	TRMT10C	88	50.933	Ficedula_albicollis
ENSMUSG00000044763	Trmt10c	99	73.058	ENSFDAG00000001576	TRMT10C	96	73.058	Fukomys_damarensis
ENSMUSG00000044763	Trmt10c	80	49.162	ENSFHEG00000015379	trmt10c	71	49.162	Fundulus_heteroclitus
ENSMUSG00000044763	Trmt10c	79	50.610	ENSGMOG00000008573	trmt10c	95	50.610	Gadus_morhua
ENSMUSG00000044763	Trmt10c	86	51.366	ENSGALG00000015328	TRMT10C	87	50.136	Gallus_gallus
ENSMUSG00000044763	Trmt10c	52	59.722	ENSGAFG00000012256	trmt10c	69	59.722	Gambusia_affinis
ENSMUSG00000044763	Trmt10c	92	47.680	ENSGACG00000015281	trmt10c	95	47.680	Gasterosteus_aculeatus
ENSMUSG00000044763	Trmt10c	95	51.244	ENSGAGG00000022825	TRMT10C	94	51.111	Gopherus_agassizii
ENSMUSG00000044763	Trmt10c	96	76.692	ENSGGOG00000006484	TRMT10C	99	76.692	Gorilla_gorilla
ENSMUSG00000044763	Trmt10c	52	55.349	ENSHBUG00000000010	trmt10c	72	52.542	Haplochromis_burtoni
ENSMUSG00000044763	Trmt10c	98	73.039	ENSHGLG00000019767	TRMT10C	98	74.265	Heterocephalus_glaber_female
ENSMUSG00000044763	Trmt10c	98	73.039	ENSHGLG00100020191	TRMT10C	98	74.265	Heterocephalus_glaber_male
ENSMUSG00000044763	Trmt10c	50	58.173	ENSHCOG00000003493	trmt10c	78	56.279	Hippocampus_comes
ENSMUSG00000044763	Trmt10c	78	52.339	ENSIPUG00000010010	trmt10c	70	53.198	Ictalurus_punctatus
ENSMUSG00000044763	Trmt10c	58	30.677	ENSIPUG00000008246	trmt10b	78	31.148	Ictalurus_punctatus
ENSMUSG00000044763	Trmt10c	98	77.887	ENSSTOG00000012199	TRMT10C	97	77.887	Ictidomys_tridecemlineatus
ENSMUSG00000044763	Trmt10c	79	50.000	ENSKMAG00000022027	trmt10c	78	49.107	Kryptolebias_marmoratus
ENSMUSG00000044763	Trmt10c	84	46.505	ENSLBEG00000013143	trmt10c	75	46.196	Labrus_bergylta
ENSMUSG00000044763	Trmt10c	77	56.522	ENSLACG00000002036	TRMT10C	84	57.099	Latimeria_chalumnae
ENSMUSG00000044763	Trmt10c	88	50.133	ENSLOCG00000017802	trmt10c	85	50.133	Lepisosteus_oculatus
ENSMUSG00000044763	Trmt10c	100	76.145	ENSLAFG00000009677	TRMT10C	100	76.145	Loxodonta_africana
ENSMUSG00000044763	Trmt10c	57	30.000	ENSMFAG00000032455	TRMT10B	84	30.645	Macaca_fascicularis
ENSMUSG00000044763	Trmt10c	57	30.000	ENSMMUG00000008662	TRMT10B	66	31.847	Macaca_mulatta
ENSMUSG00000044763	Trmt10c	99	78.537	ENSMMUG00000017780	TRMT10C	97	78.537	Macaca_mulatta
ENSMUSG00000044763	Trmt10c	57	30.000	ENSMNEG00000033400	TRMT10B	84	30.645	Macaca_nemestrina
ENSMUSG00000044763	Trmt10c	57	30.000	ENSMLEG00000035135	TRMT10B	84	30.645	Mandrillus_leucophaeus
ENSMUSG00000044763	Trmt10c	53	55.204	ENSMAMG00000003124	trmt10c	66	55.204	Mastacembelus_armatus
ENSMUSG00000044763	Trmt10c	52	55.349	ENSMZEG00005000671	trmt10c	65	55.349	Maylandia_zebra
ENSMUSG00000044763	Trmt10c	55	30.932	ENSMZEG00005020927	trmt10b	59	32.609	Maylandia_zebra
ENSMUSG00000044763	Trmt10c	60	54.217	ENSMGAG00000014375	TRMT10C	89	57.143	Meleagris_gallopavo
ENSMUSG00000044763	Trmt10c	100	82.609	ENSMAUG00000009904	Trmt10c	100	82.609	Mesocricetus_auratus
ENSMUSG00000044763	Trmt10c	100	82.651	ENSMOCG00000020572	Trmt10c	100	82.651	Microtus_ochrogaster
ENSMUSG00000044763	Trmt10c	59	52.049	ENSMMOG00000018106	trmt10c	67	53.648	Mola_mola
ENSMUSG00000044763	Trmt10c	99	55.797	ENSMODG00000025175	TRMT10C	98	55.797	Monodelphis_domestica
ENSMUSG00000044763	Trmt10c	86	45.526	ENSMALG00000016236	trmt10c	78	45.455	Monopterus_albus
ENSMUSG00000044763	Trmt10c	100	98.309	MGP_CAROLIEiJ_G0020812	Trmt10c	100	98.309	Mus_caroli
ENSMUSG00000044763	Trmt10c	100	94.686	MGP_PahariEiJ_G0016512	Trmt10c	100	94.686	Mus_pahari
ENSMUSG00000044763	Trmt10c	100	99.275	MGP_SPRETEiJ_G0021712	Trmt10c	100	99.275	Mus_spretus
ENSMUSG00000044763	Trmt10c	98	76.413	ENSMPUG00000019979	TRMT10C	96	76.413	Mustela_putorius_furo
ENSMUSG00000044763	Trmt10c	100	74.940	ENSMLUG00000028638	-	100	74.940	Myotis_lucifugus
ENSMUSG00000044763	Trmt10c	99	74.817	ENSMLUG00000030097	-	98	74.515	Myotis_lucifugus
ENSMUSG00000044763	Trmt10c	100	80.000	ENSNGAG00000022215	Trmt10c	100	80.000	Nannospalax_galili
ENSMUSG00000044763	Trmt10c	50	57.212	ENSNBRG00000017903	trmt10c	87	54.148	Neolamprologus_brichardi
ENSMUSG00000044763	Trmt10c	57	30.000	ENSNLEG00000003542	TRMT10B	84	30.645	Nomascus_leucogenys
ENSMUSG00000044763	Trmt10c	96	76.441	ENSOPRG00000007388	TRMT10C	99	76.441	Ochotona_princeps
ENSMUSG00000044763	Trmt10c	80	48.703	ENSONIG00000003128	trmt10c	91	49.563	Oreochromis_niloticus
ENSMUSG00000044763	Trmt10c	89	53.175	ENSOANG00000007508	TRMT10C	100	54.497	Ornithorhynchus_anatinus
ENSMUSG00000044763	Trmt10c	61	30.116	ENSOANG00000000887	TRMT10B	57	31.937	Ornithorhynchus_anatinus
ENSMUSG00000044763	Trmt10c	99	75.061	ENSOCUG00000011103	TRMT10C	96	75.061	Oryctolagus_cuniculus
ENSMUSG00000044763	Trmt10c	80	50.142	ENSORLG00000004992	trmt10c	70	50.142	Oryzias_latipes
ENSMUSG00000044763	Trmt10c	80	50.142	ENSORLG00020016083	trmt10c	70	50.142	Oryzias_latipes_hni
ENSMUSG00000044763	Trmt10c	80	49.858	ENSORLG00015014590	trmt10c	70	49.858	Oryzias_latipes_hsok
ENSMUSG00000044763	Trmt10c	51	58.685	ENSOMEG00000016820	trmt10c	77	58.685	Oryzias_melastigma
ENSMUSG00000044763	Trmt10c	100	73.558	ENSOGAG00000001819	TRMT10C	100	73.558	Otolemur_garnettii
ENSMUSG00000044763	Trmt10c	99	75.550	ENSOARG00000001677	TRMT10C	96	75.550	Ovis_aries
ENSMUSG00000044763	Trmt10c	57	30.417	ENSPPAG00000036969	TRMT10B	84	31.183	Pan_paniscus
ENSMUSG00000044763	Trmt10c	99	75.795	ENSPTIG00000002271	TRMT10C	97	75.795	Panthera_tigris_altaica
ENSMUSG00000044763	Trmt10c	57	30.417	ENSPTRG00000020951	TRMT10B	84	31.183	Pan_troglodytes
ENSMUSG00000044763	Trmt10c	96	76.692	ENSPTRG00000015171	TRMT10C	99	76.692	Pan_troglodytes
ENSMUSG00000044763	Trmt10c	96	76.692	ENSPTRG00000051763	-	99	76.692	Pan_troglodytes
ENSMUSG00000044763	Trmt10c	57	30.000	ENSPANG00000025571	TRMT10B	84	30.645	Papio_anubis
ENSMUSG00000044763	Trmt10c	94	48.010	ENSPKIG00000010307	trmt10c	84	46.535	Paramormyrops_kingsleyae
ENSMUSG00000044763	Trmt10c	82	58.407	ENSPSIG00000004052	TRMT10C	83	58.772	Pelodiscus_sinensis
ENSMUSG00000044763	Trmt10c	52	54.884	ENSPMGG00000001599	trmt10c	75	54.884	Periophthalmus_magnuspinnatus
ENSMUSG00000044763	Trmt10c	100	84.783	ENSPEMG00000006986	Trmt10c	100	84.783	Peromyscus_maniculatus_bairdii
ENSMUSG00000044763	Trmt10c	99	55.875	ENSPCIG00000016080	TRMT10C	98	55.875	Phascolarctos_cinereus
ENSMUSG00000044763	Trmt10c	65	30.182	ENSPFOG00000005390	trmt10b	71	30.396	Poecilia_formosa
ENSMUSG00000044763	Trmt10c	80	51.594	ENSPFOG00000009282	trmt10c	85	51.873	Poecilia_formosa
ENSMUSG00000044763	Trmt10c	55	55.128	ENSPLAG00000010774	trmt10c	84	55.128	Poecilia_latipinna
ENSMUSG00000044763	Trmt10c	65	30.182	ENSPLAG00000004405	trmt10b	71	30.396	Poecilia_latipinna
ENSMUSG00000044763	Trmt10c	52	57.143	ENSPMEG00000023060	trmt10c	76	57.143	Poecilia_mexicana
ENSMUSG00000044763	Trmt10c	65	30.182	ENSPMEG00000012573	trmt10b	71	30.396	Poecilia_mexicana
ENSMUSG00000044763	Trmt10c	82	50.000	ENSPREG00000021808	trmt10c	76	48.062	Poecilia_reticulata
ENSMUSG00000044763	Trmt10c	99	76.585	ENSPPYG00000013592	TRMT10C	96	76.585	Pongo_abelii
ENSMUSG00000044763	Trmt10c	96	75.940	ENSPCAG00000001290	TRMT10C	99	75.940	Procavia_capensis
ENSMUSG00000044763	Trmt10c	96	76.131	ENSPVAG00000009885	TRMT10C	99	76.131	Pteropus_vampyrus
ENSMUSG00000044763	Trmt10c	84	47.324	ENSPNYG00000003607	trmt10c	81	48.169	Pundamilia_nyererei
ENSMUSG00000044763	Trmt10c	58	30.279	ENSPNAG00000020605	trmt10b	79	30.738	Pygocentrus_nattereri
ENSMUSG00000044763	Trmt10c	52	59.722	ENSPNAG00000010519	trmt10c	72	57.778	Pygocentrus_nattereri
ENSMUSG00000044763	Trmt10c	100	90.097	ENSRNOG00000039567	Trmt10c	100	90.097	Rattus_norvegicus
ENSMUSG00000044763	Trmt10c	57	30.000	ENSRBIG00000029751	TRMT10B	84	30.645	Rhinopithecus_bieti
ENSMUSG00000044763	Trmt10c	57	30.000	ENSRROG00000036392	TRMT10B	84	30.645	Rhinopithecus_roxellana
ENSMUSG00000044763	Trmt10c	93	76.684	ENSSBOG00000023326	TRMT10C	100	76.684	Saimiri_boliviensis_boliviensis
ENSMUSG00000044763	Trmt10c	99	54.436	ENSSHAG00000008854	TRMT10C	97	54.436	Sarcophilus_harrisii
ENSMUSG00000044763	Trmt10c	81	50.712	ENSSFOG00015008704	trmt10c	79	50.712	Scleropages_formosus
ENSMUSG00000044763	Trmt10c	92	44.769	ENSSMAG00000021322	trmt10c	77	46.384	Scophthalmus_maximus
ENSMUSG00000044763	Trmt10c	90	44.192	ENSSDUG00000006430	trmt10c	86	42.926	Seriola_dumerili
ENSMUSG00000044763	Trmt10c	63	50.958	ENSSLDG00000001023	trmt10c	79	52.381	Seriola_lalandi_dorsalis
ENSMUSG00000044763	Trmt10c	96	75.689	ENSSARG00000014342	TRMT10C	99	75.689	Sorex_araneus
ENSMUSG00000044763	Trmt10c	80	53.892	ENSSPUG00000018495	TRMT10C	87	51.099	Sphenodon_punctatus
ENSMUSG00000044763	Trmt10c	75	52.830	ENSSPAG00000016082	trmt10c	81	52.025	Stegastes_partitus
ENSMUSG00000044763	Trmt10c	99	76.087	ENSSSCG00000011956	TRMT10C	99	76.087	Sus_scrofa
ENSMUSG00000044763	Trmt10c	80	55.856	ENSTGUG00000013621	TRMT10C	99	55.856	Taeniopygia_guttata
ENSMUSG00000044763	Trmt10c	67	50.877	ENSTRUG00000024252	trmt10c	85	50.877	Takifugu_rubripes
ENSMUSG00000044763	Trmt10c	86	46.883	ENSTNIG00000009440	trmt10c	98	46.341	Tetraodon_nigroviridis
ENSMUSG00000044763	Trmt10c	96	76.190	ENSTBEG00000013894	TRMT10C	99	76.190	Tupaia_belangeri
ENSMUSG00000044763	Trmt10c	95	76.709	ENSTTRG00000015004	TRMT10C	98	76.709	Tursiops_truncatus
ENSMUSG00000044763	Trmt10c	99	76.098	ENSUAMG00000017378	TRMT10C	99	76.098	Ursus_americanus
ENSMUSG00000044763	Trmt10c	99	76.098	ENSUMAG00000003252	TRMT10C	99	76.098	Ursus_maritimus
ENSMUSG00000044763	Trmt10c	100	73.188	ENSVVUG00000021735	TRMT10C	94	73.188	Vulpes_vulpes
ENSMUSG00000044763	Trmt10c	80	53.916	ENSXETG00000029921	trmt10c	85	60.811	Xenopus_tropicalis
ENSMUSG00000044763	Trmt10c	68	53.103	ENSXCOG00000002876	trmt10c	94	53.265	Xiphophorus_couchianus
ENSMUSG00000044763	Trmt10c	80	50.278	ENSXMAG00000019205	trmt10c	71	50.693	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0000049	tRNA binding	-	ISO	Function
GO:0000964	mitochondrial RNA 5'-end processing	-	ISO	Process
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	24703694.	IDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0009019	tRNA (guanine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0009019	tRNA (guanine-N1-)-methyltransferase activity	-	ISO	Function
GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	-	ISO	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0030678	mitochondrial ribonuclease P complex	21873635.	IBA	Component
GO:0032259	methylation	-	IEA	Process
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0052905	tRNA (guanine(9)-N(1))-methyltransferase activity	-	IEA	Function
GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	-	ISO	Function
GO:0070131	positive regulation of mitochondrial translation	21873635.	IBA	Process
GO:0070131	positive regulation of mitochondrial translation	-	ISO	Process
GO:0080009	mRNA methylation	-	ISO	Process
GO:0090646	mitochondrial tRNA processing	21873635.	IBA	Process
GO:0090646	mitochondrial tRNA processing	-	ISO	Process
GO:0097745	mitochondrial tRNA 5'-end processing	-	ISO	Process
GO:1990180	mitochondrial tRNA 3'-end processing	21873635.	IBA	Process
GO:1990180	mitochondrial tRNA 3'-end processing	-	ISO	Process