EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000006333 (Gene tree)
Gene ID
76846
Gene Symbol
Rps9
Alias
3010033P07Rik
Full Name
ribosomal protein S9
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
2905 bases
Position
chr7:3703993-3706897
Accession
1924096
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000006496S4PF01479.255.1e-1111
ENSMUSP00000104265S4PF01479.255.1e-1111
ENSMUSP00000104263S4PF01479.253.5e-0511
ENSMUSP00000120736S4PF01479.254e-0511
ENSMUSP00000104264Ribosomal_S4PF00163.196.6e-0611
ENSMUSP00000120736Ribosomal_S4PF00163.191.2e-0511
ENSMUSP00000104263Ribosomal_S4PF00163.191.2e-0511
ENSMUSP00000006496Ribosomal_S4PF00163.191.9e-0511
ENSMUSP00000104265Ribosomal_S4PF00163.191.9e-0511
ENSMUSP00000114894Ribosomal_S4PF00163.190.0007111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000006496-751-ENSMUSP00000006496194 (aa)-Q6ZWN5
ENSMUST00000146303-1185--- (aa)--
ENSMUST00000136858-525--- (aa)--
ENSMUST00000128729-378--- (aa)--
ENSMUST00000126562-896-ENSMUSP00000120736136 (aa)-D3YWH9
ENSMUST00000139818-333-ENSMUSP0000011489457 (aa)-D3YUV6
ENSMUST00000108624-478-ENSMUSP0000010426479 (aa)-D3Z673
ENSMUST00000108625-914-ENSMUSP00000104265194 (aa)-Q6ZWN5
ENSMUST00000146927-813-ENSMUSP00000116623135 (aa)-F7CJS8
ENSMUST00000108623-1347XM_006540420ENSMUSP00000104263139 (aa)XP_006540483Q9CXW7
Gene Model
Click here to download ENSMUSG00000006333's gene model file
Pathways
Pathway IDPathway NameSource
mmu03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000006333's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000006333Rps98130.000ENSMUSG00000032288Imp36631.707
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000006333Rps9100100.000ENSG00000170889RPS9100100.000Homo_sapiens
ENSMUSG00000006333Rps9100100.000ENSAPOG00000016312rps910097.423Acanthochromis_polyacanthus
ENSMUSG00000006333Rps9100100.000ENSAMEG00000004630RPS9100100.000Ailuropoda_melanoleuca
ENSMUSG00000006333Rps9100100.000ENSAOCG00000021159rps910097.423Amphiprion_ocellaris
ENSMUSG00000006333Rps9100100.000ENSAPEG00000008214rps910097.423Amphiprion_percula
ENSMUSG00000006333Rps910098.246ENSATEG00000022661rps910096.907Anabas_testudineus
ENSMUSG00000006333Rps9100100.000ENSACAG00000016566RPS910098.454Anolis_carolinensis
ENSMUSG00000006333Rps9100100.000ENSANAG00000004180RPS9100100.000Aotus_nancymaae
ENSMUSG00000006333Rps910084.211ENSANAG00000020343-9886.076Aotus_nancymaae
ENSMUSG00000006333Rps9100100.000ENSACLG00000021384rps910097.423Astatotilapia_calliptera
ENSMUSG00000006333Rps910096.491ENSAMXG00000010402rps910096.324Astyanax_mexicanus
ENSMUSG00000006333Rps9100100.000ENSBTAG00000006487RPS9100100.000Bos_taurus
ENSMUSG00000006333Rps99582.946WBGene00004478rps-99083.529Caenorhabditis_elegans
ENSMUSG00000006333Rps910096.491ENSCJAG00000017658-8695.270Callithrix_jacchus
ENSMUSG00000006333Rps9100100.000ENSCJAG00000001130-100100.000Callithrix_jacchus
ENSMUSG00000006333Rps9100100.000ENSCAFG00000002652RPS9100100.000Canis_familiaris
ENSMUSG00000006333Rps9100100.000ENSCAFG00020018329RPS9100100.000Canis_lupus_dingo
ENSMUSG00000006333Rps9100100.000ENSCHIG00000026324-9794.286Capra_hircus
ENSMUSG00000006333Rps9100100.000ENSCHIG00000024085RPS9100100.000Capra_hircus
ENSMUSG00000006333Rps9100100.000ENSTSYG00000012074-100100.000Carlito_syrichta
ENSMUSG00000006333Rps96499.194ENSCAPG00000013312RPS97799.194Cavia_aperea
ENSMUSG00000006333Rps9100100.000ENSCPOG00000020893RPS9100100.000Cavia_porcellus
ENSMUSG00000006333Rps9100100.000ENSCCAG00000007081-100100.000Cebus_capucinus
ENSMUSG00000006333Rps9100100.000ENSCATG00000029320RPS9100100.000Cercocebus_atys
ENSMUSG00000006333Rps9100100.000ENSCLAG00000000504RPS9100100.000Chinchilla_lanigera
ENSMUSG00000006333Rps9100100.000ENSCSAG00000018755-10099.485Chlorocebus_sabaeus
ENSMUSG00000006333Rps99297.765ENSCPBG00000018251RPS99897.765Chrysemys_picta_bellii
ENSMUSG00000006333Rps910091.176ENSCING00000021248-9989.175Ciona_intestinalis
ENSMUSG00000006333Rps910091.228ENSCSAVG00000003644-9991.045Ciona_savignyi
ENSMUSG00000006333Rps9100100.000ENSCANG00000036604RPS9100100.000Colobus_angolensis_palliatus
ENSMUSG00000006333Rps99889.286ENSCANG00000036954-8081.690Colobus_angolensis_palliatus
ENSMUSG00000006333Rps9100100.000ENSCGRG00001001119Rps9100100.000Cricetulus_griseus_chok1gshd
ENSMUSG00000006333Rps910085.567ENSCGRG00000000157-10085.567Cricetulus_griseus_crigri
ENSMUSG00000006333Rps9100100.000ENSCSEG00000018918rps910097.423Cynoglossus_semilaevis
ENSMUSG00000006333Rps9100100.000ENSCVAG00000007999rps910097.423Cyprinodon_variegatus
ENSMUSG00000006333Rps910095.588ENSDARG00000011405rps910095.556Danio_rerio
ENSMUSG00000006333Rps9100100.000ENSDNOG00000044158RPS9100100.000Dasypus_novemcinctus
ENSMUSG00000006333Rps9100100.000ENSDORG00000015828Rps9100100.000Dipodomys_ordii
ENSMUSG00000006333Rps99589.922FBgn0010408RpS99489.922Drosophila_melanogaster
ENSMUSG00000006333Rps910077.835ENSETEG00000009696RPS910077.835Echinops_telfairi
ENSMUSG00000006333Rps9100100.000ENSEBUG00000011539rps910092.821Eptatretus_burgeri
ENSMUSG00000006333Rps9100100.000ENSECAG00000020316RPS9100100.000Equus_caballus
ENSMUSG00000006333Rps9100100.000ENSELUG00000015000rps910096.907Esox_lucius
ENSMUSG00000006333Rps9100100.000ENSFCAG00000014048RPS9100100.000Felis_catus
ENSMUSG00000006333Rps9100100.000ENSFDAG00000007469RPS9100100.000Fukomys_damarensis
ENSMUSG00000006333Rps9100100.000ENSFHEG00000016569rps910097.423Fundulus_heteroclitus
ENSMUSG00000006333Rps910098.246ENSGMOG00000005074rps910096.392Gadus_morhua
ENSMUSG00000006333Rps9100100.000ENSGAFG00000013201rps910097.423Gambusia_affinis
ENSMUSG00000006333Rps9100100.000ENSGACG00000010761rps910097.122Gasterosteus_aculeatus
ENSMUSG00000006333Rps9100100.000ENSGAGG00000002562RPS910097.938Gopherus_agassizii
ENSMUSG00000006333Rps910088.660ENSGGOG00000025810-10088.660Gorilla_gorilla
ENSMUSG00000006333Rps910098.246ENSGGOG00000025031-8396.970Gorilla_gorilla
ENSMUSG00000006333Rps9100100.000ENSGGOG00000027839-100100.000Gorilla_gorilla
ENSMUSG00000006333Rps910098.246ENSGGOG00000042271-10095.876Gorilla_gorilla
ENSMUSG00000006333Rps9100100.000ENSHBUG00000013399rps910097.423Haplochromis_burtoni
ENSMUSG00000006333Rps9100100.000ENSHGLG00000017784RPS9100100.000Heterocephalus_glaber_female
ENSMUSG00000006333Rps9100100.000ENSHGLG00100003924RPS9100100.000Heterocephalus_glaber_male
ENSMUSG00000006333Rps9100100.000ENSHCOG00000020779rps910095.876Hippocampus_comes
ENSMUSG00000006333Rps910097.794ENSIPUG00000000061rps910097.423Ictalurus_punctatus
ENSMUSG00000006333Rps9100100.000ENSSTOG00000020325RPS9100100.000Ictidomys_tridecemlineatus
ENSMUSG00000006333Rps910085.052ENSJJAG00000015488-10085.052Jaculus_jaculus
ENSMUSG00000006333Rps9100100.000ENSJJAG00000015795-100100.000Jaculus_jaculus
ENSMUSG00000006333Rps910098.246ENSJJAG00000013812-10095.876Jaculus_jaculus
ENSMUSG00000006333Rps9100100.000ENSKMAG00000005101rps910097.423Kryptolebias_marmoratus
ENSMUSG00000006333Rps9100100.000ENSLBEG00000017125rps910097.423Labrus_bergylta
ENSMUSG00000006333Rps9100100.000ENSLACG00000011099RPS99998.551Latimeria_chalumnae
ENSMUSG00000006333Rps9100100.000ENSLOCG00000008007rps910074.227Lepisosteus_oculatus
ENSMUSG00000006333Rps9100100.000ENSLAFG00000010760RPS9100100.000Loxodonta_africana
ENSMUSG00000006333Rps9100100.000ENSMFAG00000033649RPS9100100.000Macaca_fascicularis
ENSMUSG00000006333Rps9100100.000ENSMMUG00000022552RPS9100100.000Macaca_mulatta
ENSMUSG00000006333Rps9100100.000ENSMNEG00000013713RPS9100100.000Macaca_nemestrina
ENSMUSG00000006333Rps9100100.000ENSMLEG00000023735RPS9100100.000Mandrillus_leucophaeus
ENSMUSG00000006333Rps9100100.000ENSMAMG00000019474rps910097.423Mastacembelus_armatus
ENSMUSG00000006333Rps9100100.000ENSMZEG00005016370rps910097.423Maylandia_zebra
ENSMUSG00000006333Rps9100100.000ENSMAUG00000016938Rps9100100.000Mesocricetus_auratus
ENSMUSG00000006333Rps9100100.000ENSMICG00000014928RPS9100100.000Microcebus_murinus
ENSMUSG00000006333Rps9100100.000ENSMOCG00000010762Rps9100100.000Microtus_ochrogaster
ENSMUSG00000006333Rps9100100.000ENSMOCG00000004350-10098.980Microtus_ochrogaster
ENSMUSG00000006333Rps910094.737ENSMOCG00000006744-10093.264Microtus_ochrogaster
ENSMUSG00000006333Rps9100100.000ENSMMOG00000016468rps910096.907Mola_mola
ENSMUSG00000006333Rps9100100.000ENSMODG00000003974RPS910079.381Monodelphis_domestica
ENSMUSG00000006333Rps910098.246ENSMALG00000009363rps910096.907Monopterus_albus
ENSMUSG00000006333Rps9100100.000MGP_CAROLIEiJ_G0029100Rps9100100.000Mus_caroli
ENSMUSG00000006333Rps910099.485MGP_PahariEiJ_G0020969Rps910099.485Mus_pahari
ENSMUSG00000006333Rps9100100.000MGP_SPRETEiJ_G0030153Rps9100100.000Mus_spretus
ENSMUSG00000006333Rps910094.161ENSMPUG00000019169-10091.795Mustela_putorius_furo
ENSMUSG00000006333Rps9100100.000ENSMPUG00000010394RPS9100100.000Mustela_putorius_furo
ENSMUSG00000006333Rps9100100.000ENSMLUG00000016897-10099.485Myotis_lucifugus
ENSMUSG00000006333Rps910098.969ENSMLUG00000002154-10098.969Myotis_lucifugus
ENSMUSG00000006333Rps910083.824ENSNGAG00000017852-9691.304Nannospalax_galili
ENSMUSG00000006333Rps9100100.000ENSNGAG00000023394Rps9100100.000Nannospalax_galili
ENSMUSG00000006333Rps9100100.000ENSNBRG00000003450rps910097.423Neolamprologus_brichardi
ENSMUSG00000006333Rps910097.794ENSNLEG00000018247-9996.403Nomascus_leucogenys
ENSMUSG00000006333Rps910094.853ENSNLEG00000035027-9992.806Nomascus_leucogenys
ENSMUSG00000006333Rps9100100.000ENSNLEG00000006314RPS9100100.000Nomascus_leucogenys
ENSMUSG00000006333Rps9100100.000ENSOPRG00000001628-100100.000Ochotona_princeps
ENSMUSG00000006333Rps910092.982ENSODEG00000019411-10090.722Octodon_degus
ENSMUSG00000006333Rps9100100.000ENSODEG00000002087-100100.000Octodon_degus
ENSMUSG00000006333Rps910083.088ENSODEG00000016631-8983.871Octodon_degus
ENSMUSG00000006333Rps910096.491ENSODEG00000019010-10095.876Octodon_degus
ENSMUSG00000006333Rps910094.737ENSODEG00000019680-10094.330Octodon_degus
ENSMUSG00000006333Rps9100100.000ENSONIG00000012752rps910097.423Oreochromis_niloticus
ENSMUSG00000006333Rps9100100.000ENSOANG00000014748-10099.265Ornithorhynchus_anatinus
ENSMUSG00000006333Rps910097.059ENSORLG00000011258rps910096.392Oryzias_latipes
ENSMUSG00000006333Rps910097.059ENSORLG00020007734rps910096.392Oryzias_latipes_hni
ENSMUSG00000006333Rps910097.059ENSORLG00015013498rps99896.377Oryzias_latipes_hsok
ENSMUSG00000006333Rps910098.246ENSOMEG00000010547rps910096.907Oryzias_melastigma
ENSMUSG00000006333Rps9100100.000ENSOGAG00000006813RPS9100100.000Otolemur_garnettii
ENSMUSG00000006333Rps9100100.000ENSOARG00000002753-10097.938Ovis_aries
ENSMUSG00000006333Rps910098.246ENSOARG00000010831-9895.480Ovis_aries
ENSMUSG00000006333Rps910084.559ENSPPAG00000043211-10079.381Pan_paniscus
ENSMUSG00000006333Rps9100100.000ENSPPAG00000028401RPS9100100.000Pan_paniscus
ENSMUSG00000006333Rps9100100.000ENSPPRG00000011810RPS9100100.000Panthera_pardus
ENSMUSG00000006333Rps99987.500ENSPTIG00000010169RPS983100.000Panthera_tigris_altaica
ENSMUSG00000006333Rps910088.971ENSPTRG00000045479-10082.474Pan_troglodytes
ENSMUSG00000006333Rps9100100.000ENSPTRG00000050995-100100.000Pan_troglodytes
ENSMUSG00000006333Rps910097.059ENSPTRG00000041697-9492.414Pan_troglodytes
ENSMUSG00000006333Rps9100100.000ENSPTRG00000011449RPS9100100.000Pan_troglodytes
ENSMUSG00000006333Rps910082.990ENSPANG00000011359RPS910082.990Papio_anubis
ENSMUSG00000006333Rps9100100.000ENSPSIG00000005938RPS910092.784Pelodiscus_sinensis
ENSMUSG00000006333Rps9100100.000ENSPMGG00000012078rps910097.423Periophthalmus_magnuspinnatus
ENSMUSG00000006333Rps9100100.000ENSPEMG00000013302-100100.000Peromyscus_maniculatus_bairdii
ENSMUSG00000006333Rps910096.491ENSPMAG00000000193-10093.814Petromyzon_marinus
ENSMUSG00000006333Rps9100100.000ENSPCIG00000023372RPS910098.969Phascolarctos_cinereus
ENSMUSG00000006333Rps910098.276ENSPFOG00000009299rps910096.923Poecilia_formosa
ENSMUSG00000006333Rps9100100.000ENSPLAG00000012829rps910097.423Poecilia_latipinna
ENSMUSG00000006333Rps9100100.000ENSPMEG00000017606rps910097.423Poecilia_mexicana
ENSMUSG00000006333Rps9100100.000ENSPREG00000007924rps910098.529Poecilia_reticulata
ENSMUSG00000006333Rps9100100.000ENSPPYG00000010377RPS9100100.000Pongo_abelii
ENSMUSG00000006333Rps9100100.000ENSPCAG00000012395RPS910097.884Procavia_capensis
ENSMUSG00000006333Rps9100100.000ENSPCOG00000013987RPS9100100.000Propithecus_coquereli
ENSMUSG00000006333Rps9100100.000ENSPVAG00000015571RPS910067.526Pteropus_vampyrus
ENSMUSG00000006333Rps9100100.000ENSPNYG00000002115rps910097.423Pundamilia_nyererei
ENSMUSG00000006333Rps9100100.000ENSPNAG00000011249rps910097.423Pygocentrus_nattereri
ENSMUSG00000006333Rps910095.876ENSRNOG00000039203AABR07040892.110095.876Rattus_norvegicus
ENSMUSG00000006333Rps996100.000ENSRNOG00000050067AABR07026058.110095.361Rattus_norvegicus
ENSMUSG00000006333Rps9100100.000ENSRNOG00000058909Rps9l1100100.000Rattus_norvegicus
ENSMUSG00000006333Rps9100100.000ENSRBIG00000041681RPS9100100.000Rhinopithecus_bieti
ENSMUSG00000006333Rps910094.737ENSRBIG00000040750-8892.806Rhinopithecus_bieti
ENSMUSG00000006333Rps910088.660ENSRBIG00000042902-10088.660Rhinopithecus_bieti
ENSMUSG00000006333Rps910094.737ENSRROG00000043910-8794.161Rhinopithecus_roxellana
ENSMUSG00000006333Rps910078.866ENSRROG00000030184-10078.866Rhinopithecus_roxellana
ENSMUSG00000006333Rps9100100.000ENSRROG00000036731RPS9100100.000Rhinopithecus_roxellana
ENSMUSG00000006333Rps99474.803YPL081WRPS9A9370.109Saccharomyces_cerevisiae
ENSMUSG00000006333Rps99475.591YBR189WRPS9B9471.196Saccharomyces_cerevisiae
ENSMUSG00000006333Rps910072.680ENSSBOG00000024187-10072.680Saimiri_boliviensis_boliviensis
ENSMUSG00000006333Rps9100100.000ENSSBOG00000015501-100100.000Saimiri_boliviensis_boliviensis
ENSMUSG00000006333Rps9100100.000ENSSFOG00015000650rps910097.938Scleropages_formosus
ENSMUSG00000006333Rps9100100.000ENSSMAG00000013149rps910097.423Scophthalmus_maximus
ENSMUSG00000006333Rps9100100.000ENSSDUG00000008689rps910097.423Seriola_dumerili
ENSMUSG00000006333Rps9100100.000ENSSLDG00000022240rps910097.423Seriola_lalandi_dorsalis
ENSMUSG00000006333Rps9100100.000ENSSARG00000005909RPS9100100.000Sorex_araneus
ENSMUSG00000006333Rps910095.876ENSSARG00000010223-10095.876Sorex_araneus
ENSMUSG00000006333Rps9100100.000ENSSPUG00000008604RPS910099.485Sphenodon_punctatus
ENSMUSG00000006333Rps9100100.000ENSSPAG00000016660rps910097.423Stegastes_partitus
ENSMUSG00000006333Rps9100100.000ENSSSCG00000029785RPS9100100.000Sus_scrofa
ENSMUSG00000006333Rps910098.246ENSTRUG00000015896rps910096.392Takifugu_rubripes
ENSMUSG00000006333Rps991100.000ENSTBEG00000003585RPS910088.660Tupaia_belangeri
ENSMUSG00000006333Rps990100.000ENSTTRG00000006572RPS9100100.000Tursiops_truncatus
ENSMUSG00000006333Rps9100100.000ENSUMAG00000010897RPS998100.000Ursus_maritimus
ENSMUSG00000006333Rps9100100.000ENSVVUG00000008202-100100.000Vulpes_vulpes
ENSMUSG00000006333Rps910098.969ENSXETG00000009030rps910098.969Xenopus_tropicalis
ENSMUSG00000006333Rps9100100.000ENSXMAG00000012175rps910097.423Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding-IEAFunction
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0005840ribosome-IEAComponent
GO:0006412translation-ISOProcess
GO:0008284positive regulation of cell proliferation-ISOProcess
GO:0015935small ribosomal subunit-IEAComponent
GO:0019843rRNA binding21873635.IBAFunction
GO:0022627cytosolic small ribosomal subunit21873635.IBAComponent
GO:0022627cytosolic small ribosomal subunit-ISOComponent
GO:0045182translation regulator activity-ISOFunction
GO:0045202synapse16452087.EXPComponent
GO:0045202synapse16452087.IDAComponent
GO:0045903positive regulation of translational fidelity21873635.IBAProcess
GO:1990904ribonucleoprotein complex-ISOComponent
GO:19909325.8S rRNA binding-ISOFunction

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