EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000115266 (Gene tree)
Gene ID: 393237
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein%2C homolog (yeast)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6869 bases
Position: chr2:9983079-9989947
Accession: ZDB-GENE-040426-1062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000154715	S4	PF01479.25	9.5e-10	1	1
ENSDARP00000148639	S4	PF01479.25	1.1e-09	1	1
ENSDARP00000148639	Ribosomal_S4	PF00163.19	9.5e-10	1	1
ENSDARP00000154715	Ribosomal_S4	PF00163.19	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000184369	-	904	-	ENSDARP00000148639	183 (aa)	-	A0A2R8QAU3
ENSDART00000180213	-	576	-	ENSDARP00000154715	169 (aa)	-	A0A2R8RWL4

Gene Model

Click here to download ENSDARG00000115266's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000115266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000115266	imp3	100	85.246	ENSAPOG00000014720	imp3	100	85.246	Acanthochromis_polyacanthus
ENSDARG00000115266	imp3	100	69.565	ENSAMEG00000019247	IMP3	100	69.565	Ailuropoda_melanoleuca
ENSDARG00000115266	imp3	100	85.799	ENSACIG00000022070	imp3	96	84.916	Amphilophus_citrinellus
ENSDARG00000115266	imp3	100	85.799	ENSAOCG00000015761	imp3	100	85.792	Amphiprion_ocellaris
ENSDARG00000115266	imp3	100	85.799	ENSAPEG00000005250	imp3	100	85.246	Amphiprion_percula
ENSDARG00000115266	imp3	100	86.391	ENSATEG00000020021	imp3	100	85.792	Anabas_testudineus
ENSDARG00000115266	imp3	100	67.914	ENSACAG00000016259	IMP3	100	67.914	Anolis_carolinensis
ENSDARG00000115266	imp3	100	69.022	ENSANAG00000016669	-	100	69.022	Aotus_nancymaae
ENSDARG00000115266	imp3	99	59.890	ENSANAG00000036874	-	99	59.890	Aotus_nancymaae
ENSDARG00000115266	imp3	100	85.792	ENSACLG00000009929	imp3	100	85.792	Astatotilapia_calliptera
ENSDARG00000115266	imp3	100	89.941	ENSAMXG00000018715	imp3	99	90.286	Astyanax_mexicanus
ENSDARG00000115266	imp3	99	50.000	WBGene00016740	C48B6.2	99	50.000	Caenorhabditis_elegans
ENSDARG00000115266	imp3	100	69.022	ENSCJAG00000044585	IMP3	100	69.022	Callithrix_jacchus
ENSDARG00000115266	imp3	100	67.391	ENSCAFG00000018039	IMP3	82	67.391	Canis_familiaris
ENSDARG00000115266	imp3	100	55.435	ENSCAFG00020006737	-	100	56.522	Canis_lupus_dingo
ENSDARG00000115266	imp3	100	67.391	ENSCAFG00020003760	-	100	67.391	Canis_lupus_dingo
ENSDARG00000115266	imp3	100	69.022	ENSCHIG00000006295	IMP3	100	69.022	Capra_hircus
ENSDARG00000115266	imp3	100	68.478	ENSTSYG00000005503	IMP3	100	68.478	Carlito_syrichta
ENSDARG00000115266	imp3	100	69.022	ENSCPOG00000012016	IMP3	100	69.022	Cavia_porcellus
ENSDARG00000115266	imp3	100	69.022	ENSCCAG00000002712	-	100	69.022	Cebus_capucinus
ENSDARG00000115266	imp3	99	60.119	ENSCCAG00000023378	-	99	59.770	Cebus_capucinus
ENSDARG00000115266	imp3	100	68.478	ENSCATG00000015188	IMP3	100	68.478	Cercocebus_atys
ENSDARG00000115266	imp3	100	68.478	ENSCSAG00000019732	IMP3	100	68.478	Chlorocebus_sabaeus
ENSDARG00000115266	imp3	100	69.022	ENSCHOG00000012046	IMP3	100	69.022	Choloepus_hoffmanni
ENSDARG00000115266	imp3	100	64.865	ENSCPBG00000021662	IMP3	100	64.865	Chrysemys_picta_bellii
ENSDARG00000115266	imp3	99	66.071	ENSCING00000004233	-	100	65.746	Ciona_intestinalis
ENSDARG00000115266	imp3	99	65.476	ENSCSAVG00000000698	-	100	65.193	Ciona_savignyi
ENSDARG00000115266	imp3	100	68.478	ENSCANG00000018342	IMP3	100	68.478	Colobus_angolensis_palliatus
ENSDARG00000115266	imp3	100	68.478	ENSCGRG00001001326	Imp3	100	68.478	Cricetulus_griseus_chok1gshd
ENSDARG00000115266	imp3	100	68.478	ENSCGRG00000018907	Imp3	100	68.478	Cricetulus_griseus_crigri
ENSDARG00000115266	imp3	100	86.982	ENSCSEG00000017200	imp3	99	87.363	Cynoglossus_semilaevis
ENSDARG00000115266	imp3	100	78.977	ENSCVAG00000019511	imp3	100	78.947	Cyprinodon_variegatus
ENSDARG00000115266	imp3	100	69.022	ENSDNOG00000015787	IMP3	81	69.022	Dasypus_novemcinctus
ENSDARG00000115266	imp3	100	69.565	ENSDORG00000029301	Imp3	100	69.565	Dipodomys_ordii
ENSDARG00000115266	imp3	100	64.497	FBgn0034232	CG4866	100	63.536	Drosophila_melanogaster
ENSDARG00000115266	imp3	100	68.478	ENSETEG00000004278	IMP3	100	68.478	Echinops_telfairi
ENSDARG00000115266	imp3	99	76.243	ENSEBUG00000002343	imp3	99	76.243	Eptatretus_burgeri
ENSDARG00000115266	imp3	100	67.935	ENSEASG00005015693	IMP3	100	67.935	Equus_asinus_asinus
ENSDARG00000115266	imp3	100	68.478	ENSECAG00000015786	IMP3	100	68.478	Equus_caballus
ENSDARG00000115266	imp3	100	85.207	ENSELUG00000023264	imp3	100	84.153	Esox_lucius
ENSDARG00000115266	imp3	100	68.478	ENSFCAG00000040328	IMP3	100	68.478	Felis_catus
ENSDARG00000115266	imp3	71	56.489	ENSFALG00000014811	IMP3	99	58.779	Ficedula_albicollis
ENSDARG00000115266	imp3	100	69.022	ENSFDAG00000018422	IMP3	100	69.022	Fukomys_damarensis
ENSDARG00000115266	imp3	100	86.982	ENSFHEG00000016954	imp3	100	86.339	Fundulus_heteroclitus
ENSDARG00000115266	imp3	100	82.840	ENSGMOG00000018162	imp3	100	82.514	Gadus_morhua
ENSDARG00000115266	imp3	100	54.595	ENSGALG00000040238	IMP3	100	56.216	Gallus_gallus
ENSDARG00000115266	imp3	100	86.391	ENSGAFG00000007425	imp3	100	86.339	Gambusia_affinis
ENSDARG00000115266	imp3	100	84.024	ENSGACG00000015998	imp3	100	83.607	Gasterosteus_aculeatus
ENSDARG00000115266	imp3	100	64.865	ENSGAGG00000008163	IMP3	100	64.865	Gopherus_agassizii
ENSDARG00000115266	imp3	100	68.478	ENSGGOG00000025122	IMP3	100	68.478	Gorilla_gorilla
ENSDARG00000115266	imp3	100	85.792	ENSHBUG00000018453	imp3	100	85.792	Haplochromis_burtoni
ENSDARG00000115266	imp3	100	68.478	ENSHGLG00000019824	IMP3	100	68.478	Heterocephalus_glaber_female
ENSDARG00000115266	imp3	100	68.478	ENSHGLG00100020660	IMP3	100	68.478	Heterocephalus_glaber_male
ENSDARG00000115266	imp3	100	86.982	ENSHCOG00000020565	imp3	100	86.339	Hippocampus_comes
ENSDARG00000115266	imp3	100	88.166	ENSIPUG00000013142	imp3	100	87.978	Ictalurus_punctatus
ENSDARG00000115266	imp3	100	69.022	ENSSTOG00000030143	IMP3	100	69.022	Ictidomys_tridecemlineatus
ENSDARG00000115266	imp3	100	84.153	ENSKMAG00000001956	imp3	100	84.153	Kryptolebias_marmoratus
ENSDARG00000115266	imp3	100	84.153	ENSLBEG00000008178	imp3	100	84.153	Labrus_bergylta
ENSDARG00000115266	imp3	100	81.065	ENSLACG00000022148	imp3	100	80.874	Latimeria_chalumnae
ENSDARG00000115266	imp3	100	80.328	ENSLOCG00000010237	imp3	100	80.328	Lepisosteus_oculatus
ENSDARG00000115266	imp3	99	68.681	ENSLAFG00000004425	IMP3	99	68.681	Loxodonta_africana
ENSDARG00000115266	imp3	100	68.478	ENSMFAG00000008867	IMP3	100	68.478	Macaca_fascicularis
ENSDARG00000115266	imp3	100	68.478	ENSMMUG00000016103	IMP3	100	68.478	Macaca_mulatta
ENSDARG00000115266	imp3	100	68.478	ENSMNEG00000026328	IMP3	100	68.478	Macaca_nemestrina
ENSDARG00000115266	imp3	100	86.391	ENSMAMG00000003215	imp3	100	86.339	Mastacembelus_armatus
ENSDARG00000115266	imp3	100	85.792	ENSMZEG00005005544	imp3	100	85.792	Maylandia_zebra
ENSDARG00000115266	imp3	100	67.935	ENSMAUG00000010279	Imp3	100	67.935	Mesocricetus_auratus
ENSDARG00000115266	imp3	100	69.022	ENSMICG00000044149	IMP3	100	69.022	Microcebus_murinus
ENSDARG00000115266	imp3	100	68.478	ENSMOCG00000008647	Imp3	100	68.478	Microtus_ochrogaster
ENSDARG00000115266	imp3	100	85.799	ENSMMOG00000018117	imp3	84	86.286	Mola_mola
ENSDARG00000115266	imp3	100	67.391	ENSMODG00000025193	IMP3	100	67.391	Monodelphis_domestica
ENSDARG00000115266	imp3	100	84.615	ENSMALG00000006505	imp3	100	84.153	Monopterus_albus
ENSDARG00000115266	imp3	100	68.478	MGP_CAROLIEiJ_G0032258	Imp3	100	68.478	Mus_caroli
ENSDARG00000115266	imp3	100	68.478	ENSMUSG00000032288	Imp3	100	68.478	Mus_musculus
ENSDARG00000115266	imp3	100	68.478	MGP_PahariEiJ_G0015125	Imp3	100	68.478	Mus_pahari
ENSDARG00000115266	imp3	100	68.478	MGP_SPRETEiJ_G0033398	Imp3	100	68.478	Mus_spretus
ENSDARG00000115266	imp3	100	67.935	ENSMPUG00000020147	IMP3	100	67.935	Mustela_putorius_furo
ENSDARG00000115266	imp3	100	68.478	ENSMLUG00000014032	IMP3	100	68.478	Myotis_lucifugus
ENSDARG00000115266	imp3	100	66.304	ENSNGAG00000017248	Imp3	100	66.304	Nannospalax_galili
ENSDARG00000115266	imp3	100	85.246	ENSNBRG00000004060	imp3	100	85.246	Neolamprologus_brichardi
ENSDARG00000115266	imp3	100	69.565	ENSOPRG00000015906	-	100	69.565	Ochotona_princeps
ENSDARG00000115266	imp3	100	69.022	ENSODEG00000020194	IMP3	100	69.022	Octodon_degus
ENSDARG00000115266	imp3	100	85.246	ENSONIG00000010661	imp3	100	85.246	Oreochromis_niloticus
ENSDARG00000115266	imp3	100	68.478	ENSOCUG00000004690	IMP3	100	68.478	Oryctolagus_cuniculus
ENSDARG00000115266	imp3	100	82.249	ENSORLG00000004484	imp3	100	81.967	Oryzias_latipes
ENSDARG00000115266	imp3	100	82.249	ENSORLG00020003771	imp3	100	81.967	Oryzias_latipes_hni
ENSDARG00000115266	imp3	100	81.657	ENSORLG00015006933	imp3	100	81.421	Oryzias_latipes_hsok
ENSDARG00000115266	imp3	100	84.615	ENSOMEG00000016160	imp3	100	84.153	Oryzias_melastigma
ENSDARG00000115266	imp3	100	69.565	ENSOGAG00000004917	IMP3	100	69.565	Otolemur_garnettii
ENSDARG00000115266	imp3	100	68.478	ENSPPAG00000009241	IMP3	100	68.478	Pan_paniscus
ENSDARG00000115266	imp3	100	68.478	ENSPPRG00000018701	IMP3	100	68.478	Panthera_pardus
ENSDARG00000115266	imp3	100	68.478	ENSPTRG00000052235	IMP3	100	68.478	Pan_troglodytes
ENSDARG00000115266	imp3	100	68.478	ENSPANG00000013668	IMP3	100	68.478	Papio_anubis
ENSDARG00000115266	imp3	100	88.166	ENSPKIG00000007169	imp3	100	87.978	Paramormyrops_kingsleyae
ENSDARG00000115266	imp3	100	76.882	ENSPMGG00000009379	imp3	100	76.882	Periophthalmus_magnuspinnatus
ENSDARG00000115266	imp3	100	68.478	ENSPEMG00000013003	Imp3	100	68.478	Peromyscus_maniculatus_bairdii
ENSDARG00000115266	imp3	100	86.391	ENSPFOG00000016529	imp3	100	85.792	Poecilia_formosa
ENSDARG00000115266	imp3	100	86.982	ENSPLAG00000013831	imp3	100	86.339	Poecilia_latipinna
ENSDARG00000115266	imp3	100	86.391	ENSPMEG00000000797	imp3	100	85.246	Poecilia_mexicana
ENSDARG00000115266	imp3	100	87.574	ENSPREG00000006885	imp3	100	87.432	Poecilia_reticulata
ENSDARG00000115266	imp3	100	69.022	ENSPPYG00000006664	IMP3	100	69.022	Pongo_abelii
ENSDARG00000115266	imp3	100	68.235	ENSPCAG00000006920	IMP3	99	69.231	Procavia_capensis
ENSDARG00000115266	imp3	100	69.022	ENSPCOG00000012367	IMP3	100	69.022	Propithecus_coquereli
ENSDARG00000115266	imp3	100	69.022	ENSPVAG00000010036	IMP3	100	69.022	Pteropus_vampyrus
ENSDARG00000115266	imp3	100	85.792	ENSPNYG00000000324	imp3	100	85.792	Pundamilia_nyererei
ENSDARG00000115266	imp3	100	87.574	ENSPNAG00000017113	imp3	100	87.432	Pygocentrus_nattereri
ENSDARG00000115266	imp3	100	68.478	ENSRNOG00000017460	Imp3	100	68.478	Rattus_norvegicus
ENSDARG00000115266	imp3	100	67.935	ENSRBIG00000024522	IMP3	100	67.935	Rhinopithecus_bieti
ENSDARG00000115266	imp3	100	67.935	ENSRROG00000024157	IMP3	100	67.935	Rhinopithecus_roxellana
ENSDARG00000115266	imp3	99	57.738	YHR148W	-	99	56.044	Saccharomyces_cerevisiae
ENSDARG00000115266	imp3	100	58.824	ENSSBOG00000026404	-	99	59.341	Saimiri_boliviensis_boliviensis
ENSDARG00000115266	imp3	100	69.022	ENSSBOG00000006542	-	100	69.022	Saimiri_boliviensis_boliviensis
ENSDARG00000115266	imp3	100	64.706	ENSSHAG00000006200	IMP3	99	65.385	Sarcophilus_harrisii
ENSDARG00000115266	imp3	100	85.799	ENSSFOG00015012483	imp3	100	85.246	Scleropages_formosus
ENSDARG00000115266	imp3	100	84.699	ENSSMAG00000007865	imp3	100	84.699	Scophthalmus_maximus
ENSDARG00000115266	imp3	100	85.246	ENSSDUG00000010594	imp3	100	85.246	Seriola_dumerili
ENSDARG00000115266	imp3	100	85.246	ENSSLDG00000015587	imp3	100	85.246	Seriola_lalandi_dorsalis
ENSDARG00000115266	imp3	100	69.022	ENSSARG00000009657	IMP3	100	69.022	Sorex_araneus
ENSDARG00000115266	imp3	100	84.153	ENSSPAG00000002088	imp3	100	84.153	Stegastes_partitus
ENSDARG00000115266	imp3	100	55.676	ENSTGUG00000013228	IMP3	100	57.297	Taeniopygia_guttata
ENSDARG00000115266	imp3	100	85.207	ENSTRUG00000025783	imp3	99	84.615	Takifugu_rubripes
ENSDARG00000115266	imp3	100	69.022	ENSUAMG00000022724	IMP3	100	69.022	Ursus_americanus
ENSDARG00000115266	imp3	100	69.022	ENSUMAG00000003736	IMP3	100	69.022	Ursus_maritimus
ENSDARG00000115266	imp3	100	67.935	ENSVVUG00000019589	IMP3	100	67.935	Vulpes_vulpes
ENSDARG00000115266	imp3	100	85.799	ENSXCOG00000007392	imp3	96	85.143	Xiphophorus_couchianus
ENSDARG00000115266	imp3	100	86.391	ENSXMAG00000023049	imp3	100	85.792	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0019843	rRNA binding	-	IEA	Function
GO:0030515	snoRNA binding	21873635.	IBA	Function
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034457	Mpp10 complex	21873635.	IBA	Component