EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
CESCchr636704311Missense_MutationnovelA26T0.32
CESCchr636730698Missense_MutationnovelC874Y0.34
CESCchr636715584Missense_Mutationrs747648674A41V0.23
UCECchr636704420Missense_MutationnovelF62C0.11
UCECchr6367138785'Flanknovel0.14
UCECchr6367321583'UTRnovel0.07
UCECchr636704365Missense_MutationnovelA44T0.34
UCECchr6367322293'UTRnovel0.42
UCECchr636732072Missense_MutationnovelK914N0.44
UCECchr6367139215'Flanknovel0.41
UCECchr636704294Missense_MutationnovelR20L0.39
UCECchr6367321013'UTRnovel0.32
UCECchr636730706Missense_MutationnovelA877T0.27

Copy Number Variations (CNVs)
CancerTypeFreq Q-value

Survival Analysis
CancerP-value Q-value
STAD0.035

Kaplan-Meier Survival Analysis

SARC0.00012

Kaplan-Meier Survival Analysis

MESO0.033

Kaplan-Meier Survival Analysis

ACC0.011

Kaplan-Meier Survival Analysis

HNSC0.0003

Kaplan-Meier Survival Analysis

PCPG0.032

Kaplan-Meier Survival Analysis

LAML0.0058

Kaplan-Meier Survival Analysis

LIHC0.034

Kaplan-Meier Survival Analysis

DLBC0.022

Kaplan-Meier Survival Analysis

LGG0.044

Kaplan-Meier Survival Analysis

LUAD0.0001

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000255587 (Gene tree)
Gene ID
401258
Gene Symbol
RAB44
Alias
dJ431A14.3|RASD3|RASL13
Full Name
RAB44, member RAS oncogene family
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
35,374 bases
Position
chr6:36,697,810-36,733,183
Accession
21068
RBP type
canonical RBP
Summary
RAB44 (RAB44, Member RAS Oncogene Family) is a Protein Coding gene. Among its related pathways are RAB geranylgeranylation and Innate Immune System. Gene Ontology (GO) annotations related to this gene include calcium ion binding and GTPase activity. An important paralog of this gene is RASEF.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000481054MMR_HSR1PF01926.232.3e-0511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000612677RAB44-2014274XM_024446435ENSP000004810541021 (aa)XP_024302203Q7Z6P3
Gene Model
Click here to download ENSG00000255587's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000255587Pancreatic Neoplasms9.3860000E-00519648918
ENSG00000255587Pancreatic Neoplasms9.4020000E-00519648918
ENSG00000255587Pancreatic Neoplasms1.6390000E-00419648918
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000255587's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000255587RAB447562.532ENSAMEG00000000257-10062.532Ailuropoda_melanoleuca
ENSG00000255587RAB4410087.757ENSANAG00000027844RAB4410087.855Aotus_nancymaae
ENSG00000255587RAB449966.118ENSBTAG00000050445RAB449965.544Bos_taurus
ENSG00000255587RAB4410086.680ENSCJAG00000016070RAB4410086.778Callithrix_jacchus
ENSG00000255587RAB447662.436ENSCAFG00000001418-9962.051Canis_familiaris
ENSG00000255587RAB449966.375ENSCAFG00020007300RAB449966.084Canis_lupus_dingo
ENSG00000255587RAB445272.659ENSCHIG00000015827RAB4410068.519Capra_hircus
ENSG00000255587RAB4410071.512ENSTSYG00000037416RAB4410071.512Carlito_syrichta
ENSG00000255587RAB447653.017ENSCAPG00000017850-10052.618Cavia_aperea
ENSG00000255587RAB449957.941ENSCPOG00000035721RAB449957.647Cavia_porcellus
ENSG00000255587RAB4410083.855ENSCCAG00000028656RAB4410083.953Cebus_capucinus
ENSG00000255587RAB4410089.622ENSCATG00000039932RAB4410089.622Cercocebus_atys
ENSG00000255587RAB4410061.300ENSCLAG00000010513RAB4410061.106Chinchilla_lanigera
ENSG00000255587RAB445065.104ENSCPBG00000025279RAB445465.104Chrysemys_picta_bellii
ENSG00000255587RAB4410091.969ENSCANG00000035408RAB4410091.969Colobus_angolensis_palliatus
ENSG00000255587RAB447656.138ENSCGRG00001019434Rab449954.987Cricetulus_griseus_chok1gshd
ENSG00000255587RAB447656.010ENSCGRG00000015338Rab449954.987Cricetulus_griseus_crigri
ENSG00000255587RAB449970.760ENSEASG00005021342RAB449971.345Equus_asinus_asinus
ENSG00000255587RAB449970.554ENSECAG00000000519RAB449971.137Equus_caballus
ENSG00000255587RAB449968.787ENSFCAG00000023379RAB449968.787Felis_catus
ENSG00000255587RAB445259.624ENSGAGG00000024451RAB445659.624Gopherus_agassizii
ENSG00000255587RAB4410098.629ENSGGOG00000005759RAB4410098.629Gorilla_gorilla
ENSG00000255587RAB447557.458ENSHGLG00000017024-10057.458Heterocephalus_glaber_female
ENSG00000255587RAB447557.383ENSHGLG00100013111-10057.383Heterocephalus_glaber_male
ENSG00000255587RAB447566.154ENSSTOG00000020682-9966.797Ictidomys_tridecemlineatus
ENSG00000255587RAB447655.216ENSJJAG00000021852Rab4410055.216Jaculus_jaculus
ENSG00000255587RAB4410092.067ENSMFAG00000000117RAB4410092.067Macaca_fascicularis
ENSG00000255587RAB4410091.969ENSMMUG00000003214RAB4410091.969Macaca_mulatta
ENSG00000255587RAB449792.698ENSMNEG00000007050RAB449992.698Macaca_nemestrina
ENSG00000255587RAB4410092.165ENSMLEG00000034248RAB4410092.165Mandrillus_leucophaeus
ENSG00000255587RAB447655.711ENSMAUG00000006085Rab449955.032Mesocricetus_auratus
ENSG00000255587RAB447657.070ENSMOCG00000015106Rab449957.070Microtus_ochrogaster
ENSG00000255587RAB446270.984ENSMODG00000013525-6570.984Monodelphis_domestica
ENSG00000255587RAB447655.203MGP_CAROLIEiJ_G0021338Rab449954.974Mus_caroli
ENSG00000255587RAB449960.077ENSMUSG00000064147Rab449879.070Mus_musculus
ENSG00000255587RAB447655.457MGP_SPRETEiJ_G0022251Rab449954.974Mus_spretus
ENSG00000255587RAB447659.536ENSNGAG00000014378Rab4410059.536Nannospalax_galili
ENSG00000255587RAB449390.938ENSNLEG00000010749RAB4410090.938Nomascus_leucogenys
ENSG00000255587RAB447664.602ENSOGAG00000026730-9964.602Otolemur_garnettii
ENSG00000255587RAB4410098.923ENSPPAG00000043639RAB4410098.923Pan_paniscus
ENSG00000255587RAB449969.178ENSPPRG00000011437RAB449969.178Panthera_pardus
ENSG00000255587RAB449968.585ENSPTIG00000017870RAB449968.585Panthera_tigris_altaica
ENSG00000255587RAB4410099.021ENSPTRG00000045813RAB4410099.021Pan_troglodytes
ENSG00000255587RAB4410091.969ENSPANG00000006938RAB4410091.969Papio_anubis
ENSG00000255587RAB447656.760ENSPEMG00000008688Rab449956.760Peromyscus_maniculatus_bairdii
ENSG00000255587RAB4410072.904ENSPCOG00000027072RAB4410072.904Propithecus_coquereli
ENSG00000255587RAB447653.503ENSRNOG00000001869Rab449953.631Rattus_norvegicus
ENSG00000255587RAB4410091.871ENSRBIG00000018383RAB4410091.871Rhinopithecus_bieti
ENSG00000255587RAB4410091.969ENSRROG00000037377RAB4410091.969Rhinopithecus_roxellana
ENSG00000255587RAB449968.707ENSSSCG00000001566RAB449968.610Sus_scrofa
ENSG00000255587RAB449365.765ENSUAMG00000000136RAB449566.077Ursus_americanus
ENSG00000255587RAB449958.140ENSUMAG00000009974RAB449970.958Ursus_maritimus
ENSG00000255587RAB449966.181ENSVVUG00000026366RAB449965.889Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003924GTPase activity21873635.IBAFunction
GO:0005509calcium ion binding-IEAFunction
GO:0005525GTP binding-IEAFunction
GO:0005886plasma membrane-TASComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0035577azurophil granule membrane-TASComponent
GO:0035579specific granule membrane-TASComponent
GO:0043312neutrophil degranulation-TASProcess
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