EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2134142565Missense_MutationnovelE115K0.48
BLCAchr2134142491Missense_MutationnovelR90T0.1Ribosomal_S6
BLCAchr2134125370SilentNAT25T0.5
COADchr2134125478Splice_Regionrs779997227G61G0.41
COADchr2134125366Missense_Mutationrs753096820R24H0.2Ribosomal_S6
COADchr2134125385Missense_MutationNAM30I0.15Ribosomal_S6
KIRCchr2134142423Frame_Shift_DelnovelY69Mfs*180.27Ribosomal_S6
LUADchr2134142457Missense_MutationNAV79L0.4Ribosomal_S6
LUADchr2134142459SilentnovelV79V0.14
LUADchr2134142460Nonsense_MutationnovelE80*0.14Ribosomal_S6
LUADchr2134142433Missense_MutationnovelP71S0.1Ribosomal_S6
LUADchr2134125479Missense_MutationNAG62W0.2Ribosomal_S6
LUADchr2134125466Missense_MutationNAQ57H0.2Ribosomal_S6
LUADchr2134142556Missense_Mutationrs764160661P112S0.06
LUSCchr2134142421Missense_Mutationrs773705009D67Y0.53Ribosomal_S6
READchr21341426273'UTRnovel0.22
STADchr2134125369Missense_Mutationrs555801788T25M0.15Ribosomal_S6
UCECchr2134125376SilentnovelE27E0.08
UCECchr21341428133'UTRnovel0.5
UCECchr2134142473Missense_Mutationrs777690532R84Q0.28Ribosomal_S6
UCECchr2134142405Splice_Regionnovel0.51
UCECchr2134142473Missense_Mutationrs777690532R84Q0.36Ribosomal_S6
UCECchr21341426763'UTRnovel0.17
UCECchr2134125376Missense_MutationNAE27D0.36Ribosomal_S6
UCECchr21341426353'UTRnovel0.58
UCECchr2134142414Missense_MutationNAF64L0.31Ribosomal_S6
UCECchr2134142552SilentnovelP110P0.19
UCECchr2134125406SilentnovelR37R0.24

Copy Number Variations (CNVs)
CancerTypeFreq Q-value

Survival Analysis
CancerP-value Q-value
KIRC0.00029

Kaplan-Meier Survival Analysis

ACC0.036

Kaplan-Meier Survival Analysis

SKCM0.0001

Kaplan-Meier Survival Analysis

PAAD0.038

Kaplan-Meier Survival Analysis

BLCA0.0001

Kaplan-Meier Survival Analysis

GBM0.021

Kaplan-Meier Survival Analysis

LIHC0.016

Kaplan-Meier Survival Analysis

LGG0.00071

Kaplan-Meier Survival Analysis

UVM0.00016

Kaplan-Meier Survival Analysis

OV0.016

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000243927 (Gene tree)
Gene ID
64968
Gene Symbol
MRPS6
Alias
MRP-S6|RPMS6|C21orf101
Full Name
mitochondrial ribosomal protein S6
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
69,811 bases
Position
chr21:34,073,224-34,143,034
Accession
14051
RBP type
canonical RBP
Summary
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein that belongs to the ribosomal protein S6P family. Pseudogenes corresponding to this gene are found on chromosomes 1p and 12q. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000382250Ribosomal_S6PF01250.171.7e-1611
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000483977MRPS6-2043934--- (aa)--
ENST00000488492MRPS6-205909--- (aa)--
ENST00000482679MRPS6-2031956--- (aa)--
ENST00000399312MRPS6-201990-ENSP00000382250125 (aa)-P82932
ENST00000477091MRPS6-2021061--- (aa)--
Gene Model
Click here to download ENSG00000243927's gene model file
Pathways
Pathway IDPathway NameSource
hsa03010RibosomeKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000243927Platelet Function Tests1.1920200E-005-
ENSG00000243927Platelet Function Tests1.8956100E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000243927rs1470507532134092388?Red blood cell count30595370EFO_0004305
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000243927's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000243927MRPS67669.474ENSAPOG00000001860mrps68269.474Acanthochromis_polyacanthus
ENSG00000243927MRPS69779.339ENSAMEG00000014707MRPS610079.339Ailuropoda_melanoleuca
ENSG00000243927MRPS68659.813ENSACIG00000009753mrps68659.813Amphilophus_citrinellus
ENSG00000243927MRPS67666.316ENSAOCG00000003466mrps67966.316Amphiprion_ocellaris
ENSG00000243927MRPS68660.748ENSAPEG00000015740mrps69760.748Amphiprion_percula
ENSG00000243927MRPS68659.813ENSATEG00000017579mrps69759.813Anabas_testudineus
ENSG00000243927MRPS69866.667ENSACAG00000005071MRPS610066.667Anolis_carolinensis
ENSG00000243927MRPS610090.400ENSANAG00000022450MRPS610090.400Aotus_nancymaae
ENSG00000243927MRPS68660.748ENSACLG00000026010mrps68860.748Astatotilapia_calliptera
ENSG00000243927MRPS67664.211ENSAMXG00000026285mrps68364.211Astyanax_mexicanus
ENSG00000243927MRPS69985.484ENSBTAG00000012594MRPS610085.484Bos_taurus
ENSG00000243927MRPS610090.400ENSCJAG00000043803MRPS610090.400Callithrix_jacchus
ENSG00000243927MRPS69985.484ENSCAFG00000028779MRPS610085.484Canis_familiaris
ENSG00000243927MRPS69985.484ENSCAFG00020024603MRPS610085.484Canis_lupus_dingo
ENSG00000243927MRPS69987.097ENSCHIG00000020464MRPS610087.097Capra_hircus
ENSG00000243927MRPS610085.600ENSTSYG00000004217MRPS610085.600Carlito_syrichta
ENSG00000243927MRPS68783.486ENSCAPG00000003067MRPS610083.486Cavia_aperea
ENSG00000243927MRPS68783.486ENSCPOG00000036980MRPS610083.486Cavia_porcellus
ENSG00000243927MRPS610089.600ENSCCAG00000024506MRPS610089.600Cebus_capucinus
ENSG00000243927MRPS610092.000ENSCATG00000005273MRPS610092.000Cercocebus_atys
ENSG00000243927MRPS68785.321ENSCLAG00000004549MRPS610085.321Chinchilla_lanigera
ENSG00000243927MRPS610093.600ENSCSAG00000009933MRPS610093.600Chlorocebus_sabaeus
ENSG00000243927MRPS68783.486ENSCHOG00000003863MRPS610083.486Choloepus_hoffmanni
ENSG00000243927MRPS68890.909ENSCANG00000041718MRPS610090.909Colobus_angolensis_palliatus
ENSG00000243927MRPS610080.000ENSCGRG00001004615Mrps610080.000Cricetulus_griseus_chok1gshd
ENSG00000243927MRPS68878.182ENSCGRG00000018105Mrps610078.182Cricetulus_griseus_crigri
ENSG00000243927MRPS68657.009ENSCSEG00000011973mrps69757.009Cynoglossus_semilaevis
ENSG00000243927MRPS67666.316ENSCVAG00000004108mrps68366.316Cyprinodon_variegatus
ENSG00000243927MRPS68654.630ENSDARG00000039543mrps69254.630Danio_rerio
ENSG00000243927MRPS69983.871ENSDNOG00000041980MRPS610083.871Dasypus_novemcinctus
ENSG00000243927MRPS610082.400ENSDORG00000028219Mrps610082.400Dipodomys_ordii
ENSG00000243927MRPS69246.957ENSEBUG00000001150mrps610047.581Eptatretus_burgeri
ENSG00000243927MRPS69978.226ENSEASG00005006162MRPS610078.226Equus_asinus_asinus
ENSG00000243927MRPS68660.185ENSELUG00000015914mrps69360.185Esox_lucius
ENSG00000243927MRPS69987.903ENSFCAG00000035307MRPS610087.903Felis_catus
ENSG00000243927MRPS69766.116ENSFALG00000005093MRPS69966.116Ficedula_albicollis
ENSG00000243927MRPS68782.569ENSFDAG00000014986MRPS610082.569Fukomys_damarensis
ENSG00000243927MRPS68857.273ENSFHEG00000005395mrps69057.273Fundulus_heteroclitus
ENSG00000243927MRPS67664.211ENSGMOG00000019810mrps68164.211Gadus_morhua
ENSG00000243927MRPS69354.310ENSGAFG00000006521mrps610054.310Gambusia_affinis
ENSG00000243927MRPS69864.754ENSGAGG00000017604MRPS610064.754Gopherus_agassizii
ENSG00000243927MRPS688100.000ENSGGOG00000043405MRPS6100100.000Gorilla_gorilla
ENSG00000243927MRPS68660.748ENSHBUG00000010529mrps68460.748Haplochromis_burtoni
ENSG00000243927MRPS69984.677ENSHGLG00000011207MRPS610084.677Heterocephalus_glaber_female
ENSG00000243927MRPS68782.569ENSHGLG00100016976MRPS610082.569Heterocephalus_glaber_male
ENSG00000243927MRPS69256.522ENSHCOG00000012233mrps69956.522Hippocampus_comes
ENSG00000243927MRPS68783.486ENSSTOG00000028147MRPS610083.486Ictidomys_tridecemlineatus
ENSG00000243927MRPS610077.600ENSJJAG00000019018Mrps610077.600Jaculus_jaculus
ENSG00000243927MRPS67663.158ENSKMAG00000015801mrps68063.158Kryptolebias_marmoratus
ENSG00000243927MRPS67661.053ENSLBEG00000012963mrps67861.053Labrus_bergylta
ENSG00000243927MRPS69859.350ENSLACG00000011712MRPS610059.350Latimeria_chalumnae
ENSG00000243927MRPS68656.481ENSLOCG00000018238mrps69056.481Lepisosteus_oculatus
ENSG00000243927MRPS69173.684ENSLAFG00000020645MRPS69273.684Loxodonta_africana
ENSG00000243927MRPS69090.179ENSMFAG00000032733MRPS69790.179Macaca_fascicularis
ENSG00000243927MRPS69090.179ENSMMUG00000023156MRPS69790.179Macaca_mulatta
ENSG00000243927MRPS69088.393ENSMNEG00000004266MRPS69788.393Macaca_nemestrina
ENSG00000243927MRPS68891.818ENSMLEG00000042372MRPS610091.818Mandrillus_leucophaeus
ENSG00000243927MRPS68660.748ENSMAMG00000019881mrps69360.748Mastacembelus_armatus
ENSG00000243927MRPS68660.748ENSMZEG00005008327mrps68860.748Maylandia_zebra
ENSG00000243927MRPS68662.037ENSMGAG00000016139MRPS610062.037Meleagris_gallopavo
ENSG00000243927MRPS610088.000ENSMICG00000027621MRPS610088.000Microcebus_murinus
ENSG00000243927MRPS610081.600ENSMOCG00000006588Mrps610081.600Microtus_ochrogaster
ENSG00000243927MRPS68662.617ENSMMOG00000003410mrps68062.617Mola_mola
ENSG00000243927MRPS68776.147ENSMODG00000021054MRPS69276.147Monodelphis_domestica
ENSG00000243927MRPS67667.368ENSMALG00000002531mrps68667.368Monopterus_albus
ENSG00000243927MRPS610085.600MGP_CAROLIEiJ_G0020970Mrps610085.600Mus_caroli
ENSG00000243927MRPS610085.600ENSMUSG00000039680Mrps610085.600Mus_musculus
ENSG00000243927MRPS610084.800MGP_PahariEiJ_G0016675Mrps610084.800Mus_pahari
ENSG00000243927MRPS610085.600MGP_SPRETEiJ_G0021876Mrps610085.600Mus_spretus
ENSG00000243927MRPS69987.097ENSMPUG00000001330MRPS610087.097Mustela_putorius_furo
ENSG00000243927MRPS68986.486ENSMLUG00000027328MRPS610086.486Myotis_lucifugus
ENSG00000243927MRPS610082.400ENSNGAG00000004525Mrps610082.400Nannospalax_galili
ENSG00000243927MRPS68661.682ENSNBRG00000015785mrps68861.682Neolamprologus_brichardi
ENSG00000243927MRPS69995.161ENSNLEG00000033707MRPS610095.161Nomascus_leucogenys
ENSG00000243927MRPS69877.049ENSMEUG00000006954MRPS67177.049Notamacropus_eugenii
ENSG00000243927MRPS68880.000ENSOPRG00000018417-6180.000Ochotona_princeps
ENSG00000243927MRPS69984.677ENSODEG00000003176-10084.677Octodon_degus
ENSG00000243927MRPS69983.065ENSODEG00000019042-10083.065Octodon_degus
ENSG00000243927MRPS69983.871ENSODEG00000019820-10083.871Octodon_degus
ENSG00000243927MRPS68660.748ENSONIG00000009920mrps69160.748Oreochromis_niloticus
ENSG00000243927MRPS68879.091ENSOCUG00000025692MRPS69979.091Oryctolagus_cuniculus
ENSG00000243927MRPS67666.316ENSORLG00000011435mrps67966.316Oryzias_latipes
ENSG00000243927MRPS67665.263ENSORLG00020016619mrps68365.263Oryzias_latipes_hni
ENSG00000243927MRPS67665.263ENSORLG00015001426mrps68765.263Oryzias_latipes_hsok
ENSG00000243927MRPS67666.316ENSOMEG00000022340mrps68166.316Oryzias_melastigma
ENSG00000243927MRPS69985.484ENSOGAG00000031219MRPS610085.484Otolemur_garnettii
ENSG00000243927MRPS68884.545ENSOARG00000012707MRPS69778.049Ovis_aries
ENSG00000243927MRPS688100.000ENSPPAG00000033507MRPS6100100.000Pan_paniscus
ENSG00000243927MRPS68786.239ENSPPRG00000011728MRPS68886.239Panthera_pardus
ENSG00000243927MRPS68786.239ENSPTIG00000000875MRPS68886.239Panthera_tigris_altaica
ENSG00000243927MRPS6100100.000ENSPTRG00000013877MRPS6100100.000Pan_troglodytes
ENSG00000243927MRPS610091.200ENSPANG00000033815MRPS610091.200Papio_anubis
ENSG00000243927MRPS610053.600ENSPKIG00000006507mrps610053.600Paramormyrops_kingsleyae
ENSG00000243927MRPS69154.386ENSPSIG00000017909MRPS69956.731Pelodiscus_sinensis
ENSG00000243927MRPS69378.448ENSPEMG00000023075Mrps610080.909Peromyscus_maniculatus_bairdii
ENSG00000243927MRPS69877.049ENSPCIG00000008946MRPS610077.049Phascolarctos_cinereus
ENSG00000243927MRPS67662.105ENSPFOG00000016295mrps68762.105Poecilia_formosa
ENSG00000243927MRPS67662.105ENSPLAG00000003859mrps67962.105Poecilia_latipinna
ENSG00000243927MRPS67661.053ENSPMEG00000019989mrps68261.053Poecilia_mexicana
ENSG00000243927MRPS67660.000ENSPREG00000023188mrps68660.000Poecilia_reticulata
ENSG00000243927MRPS68693.519ENSPPYG00000011386MRPS68892.920Pongo_abelii
ENSG00000243927MRPS68880.909ENSPCAG00000002299MRPS610080.909Procavia_capensis
ENSG00000243927MRPS69688.333ENSPCOG00000013816MRPS610088.000Propithecus_coquereli
ENSG00000243927MRPS69987.097ENSPVAG00000013059MRPS66787.097Pteropus_vampyrus
ENSG00000243927MRPS68660.748ENSPNYG00000017777mrps68860.748Pundamilia_nyererei
ENSG00000243927MRPS67664.211ENSPNAG00000027225mrps67664.211Pygocentrus_nattereri
ENSG00000243927MRPS610087.200ENSRNOG00000059381Mrps610087.200Rattus_norvegicus
ENSG00000243927MRPS68891.818ENSRBIG00000003438MRPS610091.818Rhinopithecus_bieti
ENSG00000243927MRPS68890.909ENSRROG00000040127MRPS68890.909Rhinopithecus_roxellana
ENSG00000243927MRPS68987.387ENSSBOG00000034972MRPS69987.387Saimiri_boliviensis_boliviensis
ENSG00000243927MRPS67765.625ENSSFOG00015003890mrps67565.625Scleropages_formosus
ENSG00000243927MRPS67663.158ENSSMAG00000008876mrps68263.158Scophthalmus_maximus
ENSG00000243927MRPS67664.211ENSSDUG00000005175mrps68864.211Seriola_dumerili
ENSG00000243927MRPS68658.879ENSSLDG00000023246mrps69758.879Seriola_lalandi_dorsalis
ENSG00000243927MRPS68055.000ENSSPUG00000013319MRPS610055.000Sphenodon_punctatus
ENSG00000243927MRPS67666.316ENSSPAG00000010499mrps68666.316Stegastes_partitus
ENSG00000243927MRPS69987.097ENSSSCG00000026981MRPS610087.097Sus_scrofa
ENSG00000243927MRPS69765.289ENSTGUG00000000454MRPS69965.289Taeniopygia_guttata
ENSG00000243927MRPS68661.111ENSTRUG00000021829mrps69561.111Takifugu_rubripes
ENSG00000243927MRPS68787.156ENSTTRG00000004878MRPS610087.156Tursiops_truncatus
ENSG00000243927MRPS69280.870ENSUAMG00000028318MRPS610080.870Ursus_americanus
ENSG00000243927MRPS69777.686ENSUMAG00000020133MRPS69877.686Ursus_maritimus
ENSG00000243927MRPS68768.807ENSVPAG00000009160MRPS610068.807Vicugna_pacos
ENSG00000243927MRPS69281.739ENSVVUG00000022921MRPS610081.739Vulpes_vulpes
ENSG00000243927MRPS69857.377ENSXETG00000032139MRPS610064.545Xenopus_tropicalis
ENSG00000243927MRPS67663.158ENSXMAG00000019807mrps68663.158Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome11402041.ISSFunction
GO:0003735structural constituent of ribosome11279123.NASFunction
GO:0005515protein binding22458338.25416956.IPIFunction
GO:0005743mitochondrial inner membrane-TASComponent
GO:0005763mitochondrial small ribosomal subunit21873635.IBAComponent
GO:0005763mitochondrial small ribosomal subunit25838379.IDAComponent
GO:0005763mitochondrial small ribosomal subunit11402041.ISSComponent
GO:0006412translation11279123.NASProcess
GO:0015935small ribosomal subunit11279123.NASComponent
GO:0032543mitochondrial translation11402041.ISSProcess
GO:0070125mitochondrial translational elongation-TASProcess
GO:0070126mitochondrial translational termination-TASProcess
GO:0070181small ribosomal subunit rRNA binding21873635.IBAFunction
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