EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD

Copy Number Variations (CNVs)
CancerTypeFreq Q-value

Survival Analysis
CancerP-value Q-value
KIRC0.014

Kaplan-Meier Survival Analysis

MESO0.045

Kaplan-Meier Survival Analysis

ACC0.02

Kaplan-Meier Survival Analysis

HNSC0.0056

Kaplan-Meier Survival Analysis

SKCM0.0066

Kaplan-Meier Survival Analysis

BRCA0.046

Kaplan-Meier Survival Analysis

ESCA0.0049

Kaplan-Meier Survival Analysis

KIRP0.044

Kaplan-Meier Survival Analysis

PAAD0.041

Kaplan-Meier Survival Analysis

BLCA0.0035

Kaplan-Meier Survival Analysis

CESC0.0083

Kaplan-Meier Survival Analysis

LAML0.00093

Kaplan-Meier Survival Analysis

LIHC0.021

Kaplan-Meier Survival Analysis

THCA0.0014

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Orthologs
Description
Ensembl ID
ENSG00000235272 (Gene tree)
Gene ID
353267
Gene Symbol
RAMACL
Alias
dJ427A4.2|C6orf119|FAM103A2P|RAMMETL
Full Name
RNA guanine-7 methyltransferase activating subunit like (pseudogene)
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
2,077 bases
Position
chr6:166,585,518-166,587,594
Accession
21234
RBP type
canonical RBP
Summary
RAMACL (RNA Guanine-7 Methyltransferase Activating Subunit Like (Pseudogene)) is a Pseudogene. An important paralog of this gene is RAMAC.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000498060RAMPF15320.61.3e-2411
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000444122RAMACL-2011991-ENSP00000498060118 (aa)-UPI000020D48E
Gene Model
Click here to download ENSG00000235272's gene model file
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000235272RAMACL5155.000ENSAPOG00000004796RAMAC10042.975Acanthochromis_polyacanthus
ENSG00000235272RAMACL10094.915ENSAMEG00000000625-10094.915Ailuropoda_melanoleuca
ENSG00000235272RAMACL5156.667ENSAOCG00000024054RAMAC10043.802Amphiprion_ocellaris
ENSG00000235272RAMACL5156.667ENSAPEG00000024710RAMAC10043.802Amphiprion_percula
ENSG00000235272RAMACL6751.899ENSACAG00000013811-10051.899Anolis_carolinensis
ENSG00000235272RAMACL9041.284ENSACAG00000023921-9141.284Anolis_carolinensis
ENSG00000235272RAMACL10088.983ENSANAG00000022975-10088.983Aotus_nancymaae
ENSG00000235272RAMACL10097.458ENSANAG00000026987-10097.458Aotus_nancymaae
ENSG00000235272RAMACL10093.220ENSBTAG00000027069RAMAC10093.220Bos_taurus
ENSG00000235272RAMACL9890.517ENSCJAG00000038259-9790.517Callithrix_jacchus
ENSG00000235272RAMACL10096.610ENSCJAG00000015882-10096.610Callithrix_jacchus
ENSG00000235272RAMACL9994.017ENSCAFG00000013181RAMAC10094.017Canis_familiaris
ENSG00000235272RAMACL10094.068ENSCAFG00020015938-10094.068Canis_lupus_dingo
ENSG00000235272RAMACL10094.068ENSCHIG00000006828-10094.068Capra_hircus
ENSG00000235272RAMACL10077.966ENSTSYG00000011955-8692.593Carlito_syrichta
ENSG00000235272RAMACL10089.831ENSTSYG00000032997-10089.831Carlito_syrichta
ENSG00000235272RAMACL10089.831ENSCAPG00000017693-10089.831Cavia_aperea
ENSG00000235272RAMACL10089.831ENSCPOG00000033303-10089.831Cavia_porcellus
ENSG00000235272RAMACL10097.458ENSCCAG00000035794-10097.458Cebus_capucinus
ENSG00000235272RAMACL10099.153ENSCATG00000033049-10099.153Cercocebus_atys
ENSG00000235272RAMACL10088.983ENSCLAG00000007371-10088.983Chinchilla_lanigera
ENSG00000235272RAMACL9989.744ENSCHOG00000013717-9889.744Choloepus_hoffmanni
ENSG00000235272RAMACL10063.333ENSCPBG00000017593-10063.333Chrysemys_picta_bellii
ENSG00000235272RAMACL10087.288ENSCGRG00001021992-10087.288Cricetulus_griseus_chok1gshd
ENSG00000235272RAMACL10087.288ENSCGRG00000013886-10087.288Cricetulus_griseus_crigri
ENSG00000235272RAMACL6951.765ENSCSEG00000009800RAMAC6951.765Cynoglossus_semilaevis
ENSG00000235272RAMACL8543.697ENSCVAG00000011717RAMAC9846.218Cyprinodon_variegatus
ENSG00000235272RAMACL10082.203ENSDNOG00000044526-10082.203Dasypus_novemcinctus
ENSG00000235272RAMACL10082.203ENSDNOG00000003115-10082.203Dasypus_novemcinctus
ENSG00000235272RAMACL10079.661ENSDORG00000012953-10079.661Dipodomys_ordii
ENSG00000235272RAMACL10076.271ENSETEG00000006015-10076.271Echinops_telfairi
ENSG00000235272RAMACL10092.373ENSEASG00005006977-10092.373Equus_asinus_asinus
ENSG00000235272RAMACL10092.373ENSECAG00000023312RAMAC10092.373Equus_caballus
ENSG00000235272RAMACL10092.373ENSFCAG00000032519-10092.373Felis_catus
ENSG00000235272RAMACL9760.526ENSFALG00000011211-9460.526Ficedula_albicollis
ENSG00000235272RAMACL10088.136ENSFDAG00000009442-10088.136Fukomys_damarensis
ENSG00000235272RAMACL7547.917ENSFHEG00000006024RAMAC7747.917Fundulus_heteroclitus
ENSG00000235272RAMACL9757.391ENSGALG00000006010RAMAC9757.391Gallus_gallus
ENSG00000235272RAMACL10062.500ENSGAGG00000021379-10062.500Gopherus_agassizii
ENSG00000235272RAMACL9491.892ENSGGOG00000000654-9591.892Gorilla_gorilla
ENSG00000235272RAMACL9779.130ENSGGOG00000037539-9479.130Gorilla_gorilla
ENSG00000235272RAMACL100100.000ENSGGOG00000022754FAM103A1100100.000Gorilla_gorilla
ENSG00000235272RAMACL7052.941ENSHBUG00000002870RAMAC6956.818Haplochromis_burtoni
ENSG00000235272RAMACL10085.593ENSHGLG00000020615-10085.593Heterocephalus_glaber_female
ENSG00000235272RAMACL10086.441ENSHGLG00000009285-10086.441Heterocephalus_glaber_female
ENSG00000235272RAMACL10086.441ENSHGLG00100016903-10086.441Heterocephalus_glaber_male
ENSG00000235272RAMACL10085.593ENSHGLG00100020097-10085.593Heterocephalus_glaber_male
ENSG00000235272RAMACL5650.000ENSHCOG00000000556RAMAC5750.000Hippocampus_comes
ENSG00000235272RAMACL10089.076ENSSTOG00000022253-10089.076Ictidomys_tridecemlineatus
ENSG00000235272RAMACL10091.525ENSJJAG00000003727-10091.525Jaculus_jaculus
ENSG00000235272RAMACL9353.571ENSLACG00000017822-9153.571Latimeria_chalumnae
ENSG00000235272RAMACL9650.427ENSLOCG00000012944RAMAC9349.573Lepisosteus_oculatus
ENSG00000235272RAMACL10088.983ENSLAFG00000008134-10088.983Loxodonta_africana
ENSG00000235272RAMACL100100.000ENSMFAG00000039932RAMAC100100.000Macaca_fascicularis
ENSG00000235272RAMACL100100.000ENSMMUG00000045566RAMAC100100.000Macaca_mulatta
ENSG00000235272RAMACL100100.000ENSMLEG00000041885-100100.000Mandrillus_leucophaeus
ENSG00000235272RAMACL10088.983ENSMAUG00000016043-10088.983Mesocricetus_auratus
ENSG00000235272RAMACL10089.831ENSMICG00000046729-10089.831Microcebus_murinus
ENSG00000235272RAMACL10088.136ENSMOCG00000019940-10088.136Microtus_ochrogaster
ENSG00000235272RAMACL5659.091ENSMMOG00000018545RAMAC5259.091Mola_mola
ENSG00000235272RAMACL10084.746ENSMODG00000025003-10084.746Monodelphis_domestica
ENSG00000235272RAMACL10085.593ENSMODG00000019373-10085.593Monodelphis_domestica
ENSG00000235272RAMACL10084.746ENSMODG00000023514-10084.746Monodelphis_domestica
ENSG00000235272RAMACL10077.966ENSMODG00000019536-10077.966Monodelphis_domestica
ENSG00000235272RAMACL5481.250MGP_CAROLIEiJ_G0029926-9781.250Mus_caroli
ENSG00000235272RAMACL10087.395MGP_CAROLIEiJ_G0029925-10087.395Mus_caroli
ENSG00000235272RAMACL10087.395ENSMUSG00000038646Ramac10087.395Mus_musculus
ENSG00000235272RAMACL8683.495ENSMUSG00000074826Gm1076710083.495Mus_musculus
ENSG00000235272RAMACL10086.555MGP_PahariEiJ_G0013147-10086.555Mus_pahari
ENSG00000235272RAMACL5975.676MGP_PahariEiJ_G0013148-9675.676Mus_pahari
ENSG00000235272RAMACL10087.395MGP_SPRETEiJ_G0031028Ramac10087.395Mus_spretus
ENSG00000235272RAMACL6784.810MGP_SPRETEiJ_G0019537-7984.810Mus_spretus
ENSG00000235272RAMACL8684.466MGP_SPRETEiJ_G0019535Gm1076710084.466Mus_spretus
ENSG00000235272RAMACL10087.288ENSMLUG00000008298-10087.288Myotis_lucifugus
ENSG00000235272RAMACL10088.983ENSNGAG00000017332-9988.983Nannospalax_galili
ENSG00000235272RAMACL100100.000ENSNLEG00000010942-100100.000Nomascus_leucogenys
ENSG00000235272RAMACL9480.180ENSNLEG00000034853-9480.180Nomascus_leucogenys
ENSG00000235272RAMACL10085.593ENSODEG00000015254-10085.593Octodon_degus
ENSG00000235272RAMACL10075.424ENSOANG00000004275-10075.424Ornithorhynchus_anatinus
ENSG00000235272RAMACL8543.689ENSOMEG00000011658RAMAC9743.689Oryzias_melastigma
ENSG00000235272RAMACL10085.593ENSOGAG00000008039-10085.593Otolemur_garnettii
ENSG00000235272RAMACL10094.068ENSOARG00000013962-10094.068Ovis_aries
ENSG00000235272RAMACL10070.339ENSPPAG00000039905-10070.339Pan_paniscus
ENSG00000235272RAMACL100100.000ENSPPAG00000042316-100100.000Pan_paniscus
ENSG00000235272RAMACL10092.373ENSPPRG00000011086-10092.373Panthera_pardus
ENSG00000235272RAMACL10092.373ENSPTIG00000009107-10092.373Panthera_tigris_altaica
ENSG00000235272RAMACL100100.000ENSPTRG00000007387RAMAC100100.000Pan_troglodytes
ENSG00000235272RAMACL100100.000ENSPANG00000020645-100100.000Papio_anubis
ENSG00000235272RAMACL9745.378ENSPKIG00000019767RAMAC6845.378Paramormyrops_kingsleyae
ENSG00000235272RAMACL10064.167ENSPSIG00000006833-10064.167Pelodiscus_sinensis
ENSG00000235272RAMACL9240.141ENSPMGG00000000787RAMAC6449.000Periophthalmus_magnuspinnatus
ENSG00000235272RAMACL10085.593ENSPCIG00000008378-10085.593Phascolarctos_cinereus
ENSG00000235272RAMACL6151.389ENSPFOG00000017361RAMAC7547.368Poecilia_formosa
ENSG00000235272RAMACL6151.389ENSPLAG00000019830RAMAC7847.368Poecilia_latipinna
ENSG00000235272RAMACL6151.389ENSPMEG00000024042RAMAC7847.368Poecilia_mexicana
ENSG00000235272RAMACL100100.000ENSPPYG00000006736RAMAC100100.000Pongo_abelii
ENSG00000235272RAMACL10090.678ENSPCAG00000016435-10090.678Procavia_capensis
ENSG00000235272RAMACL10088.983ENSPCOG00000019685-10088.983Propithecus_coquereli
ENSG00000235272RAMACL10094.915ENSPVAG00000009382-10094.915Pteropus_vampyrus
ENSG00000235272RAMACL10084.034ENSRNOG00000019426Ramac10084.034Rattus_norvegicus
ENSG00000235272RAMACL10099.153ENSRBIG00000039782-10099.153Rhinopithecus_bieti
ENSG00000235272RAMACL10099.153ENSRROG00000032118-10099.153Rhinopithecus_roxellana
ENSG00000235272RAMACL10094.068ENSSBOG00000031767-10094.068Saimiri_boliviensis_boliviensis
ENSG00000235272RAMACL10080.508ENSSBOG00000025722-10080.508Saimiri_boliviensis_boliviensis
ENSG00000235272RAMACL9985.470ENSSHAG00000017873-9985.470Sarcophilus_harrisii
ENSG00000235272RAMACL9246.429ENSSFOG00015016816RAMAC7646.429Scleropages_formosus
ENSG00000235272RAMACL10077.966ENSSARG00000006307-10077.966Sorex_araneus
ENSG00000235272RAMACL8163.542ENSSPUG00000010499-10062.295Sphenodon_punctatus
ENSG00000235272RAMACL10045.455ENSSPAG00000010519RAMAC10048.092Stegastes_partitus
ENSG00000235272RAMACL10090.678ENSSSCG00000038630-10090.678Sus_scrofa
ENSG00000235272RAMACL5155.000ENSTNIG00000009492RAMAC5945.455Tetraodon_nigroviridis
ENSG00000235272RAMACL10082.203ENSTBEG00000014299-10082.203Tupaia_belangeri
ENSG00000235272RAMACL10094.915ENSTTRG00000004932FAM103A110094.915Tursiops_truncatus
ENSG00000235272RAMACL10095.763ENSUAMG00000006286-10095.763Ursus_americanus
ENSG00000235272RAMACL10095.763ENSUMAG00000010167-10095.763Ursus_maritimus
ENSG00000235272RAMACL10074.576ENSVPAG00000009431-10074.576Vicugna_pacos
ENSG00000235272RAMACL10094.915ENSVVUG00000005104-10094.915Vulpes_vulpes
ENSG00000235272RAMACL9352.252ENSXETG00000030369rammet9152.252Xenopus_tropicalis
ENSG00000235272RAMACL7549.474ENSXMAG00000015208RAMAC7849.474Xiphophorus_maculatus
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