EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
ACC	chr15	44670017	Missense_Mutation	novel	S243F	0.09
ACC	chr15	44672149	Missense_Mutation	novel	A175S	0.16	PAT1
BRCA	chr15	44669999	Missense_Mutation	NA	P249L	0.4
BRCA	chr15	44665951	3'UTR	novel		0.2
BRCA	chr15	44672171	Intron	novel		0.22
BRCA	chr15	44674412	Intron	novel		0.27
BRCA	chr15	44675615	Missense_Mutation	NA	E31D	0.16
BRCA	chr15	44673253	Missense_Mutation	NA	S143L	0.24	PAT1
COAD	chr15	44669790	Missense_Mutation	NA	G288V	0.44
COAD	chr15	44674223	Missense_Mutation	novel	L77P	0.26	PAT1
COAD	chr15	44672435	Silent	novel	P156P	0.35
COAD	chr15	44665833	3'UTR	novel		0.29
COAD	chr15	44672424	Missense_Mutation	NA	R160Q	0.31	PAT1
COAD	chr15	44669013	Silent	NA	L397L	0.52
COAD	chr15	44670052	Silent	rs577616730	D231D	0.29
COAD	chr15	44669868	Missense_Mutation	rs772569538	R262Q	0.26
KIRC	chr15	44673270	Silent	novel	F137F	0.28
KIRC	chr15	44672047	Missense_Mutation	NA	A209S	0.36	PAT1
LIHC	chr15	44669391	Missense_Mutation	novel	I318T	0.32
LIHC	chr15	44672023	Missense_Mutation	novel	Y217H	0.62
MESO	chr15	44665807	3'UTR	novel		0.39
SARC	chr15	44666460	Missense_Mutation	novel	S515R	0.07
UCEC	chr15	44665737	3'UTR	novel		0.29
UCEC	chr15	44668425	Missense_Mutation	rs760151963	E428K	0.45
UCEC	chr15	44673257	Missense_Mutation	novel	T142A	0.14	PAT1
UCEC	chr15	44668425	Missense_Mutation	rs760151963	E428K	0.28
UCEC	chr15	44670010	Silent	NA	K245K	0.47
UCEC	chr15	44674227	Missense_Mutation	NA	A76T	0.48	PAT1
UCEC	chr15	44672434	Missense_Mutation	NA	R157W	0.25	PAT1
UCEC	chr15	44668999	Missense_Mutation	rs199627539	R402Q	0.43
UCEC	chr15	44669520	Missense_Mutation	NA	R307Q	0.41
UCEC	chr15	44669860	Missense_Mutation	novel	G265S	0.44
UCEC	chr15	44675582	Silent	rs562812709	D42D	0.08
UCEC	chr15	44669061	Silent	novel	L381L	0.13
UCEC	chr15	44675673	Missense_Mutation	novel	G12V	0.14
UCEC	chr15	44668425	Missense_Mutation	rs760151963	E428K	0.53
UCEC	chr15	44669360	Silent	rs748916952	P328P	0.07
UCEC	chr15	44668425	Missense_Mutation	rs760151963	E428K	0.92
UCEC	chr15	44673351	Silent	novel	P110P	0.27
UCEC	chr15	44672184	Intron	novel		0.41
UCEC	chr15	44669864	Silent	rs759960434	I263I	0.31
UCEC	chr15	44675623	Nonsense_Mutation	novel	E29*	0.41
UCEC	chr15	44672087	Missense_Mutation	novel	K195N	0.06	PAT1
UCEC	chr15	44674378	Intron	novel		0.5
UCEC	chr15	44669369	Silent	NA	R325R	0.39
UCEC	chr15	44676565	Splice_Region	novel		0.27
UCEC	chr15	44673360	Silent	rs562418280	S107S	0.38
UCEC	chr15	44675534	Missense_Mutation	novel	E58D	0.39
UCEC	chr15	44668425	Missense_Mutation	rs760151963	E428K	0.31
UCEC	chr15	44670051	Missense_Mutation	rs267604224	E232K	0.28
UCEC	chr15	44675582	Silent	rs562812709	D42D	0.27
UCEC	chr15	44672236	Intron	novel		0.48
UCEC	chr15	44670051	Missense_Mutation	rs267604224	E232K	0.26
UCEC	chr15	44673325	Missense_Mutation	NA	S119N	0.37	PAT1
UCEC	chr15	44665870	3'UTR	novel		0.51
UCEC	chr15	44666501	Missense_Mutation	novel	M502L	0.08

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
ACC	DEL	0.2	0.079424
CESC	DEL	0.1898	0.00049652
COAD	DEL	0.3481	2.5735e-07
DLBC	DEL	0.25	7.1625e-05
GBM	DEL	0.2062	3.453e-12
HNSC	DEL	0.1628	0.11567
KICH	AMP	0.2576	0.21756
KIRP	DEL	0.1111	0.2062
LUAD	DEL	0.3798	6.8561e-07
LUSC	DEL	0.2555	5.0847e-08
MESO	DEL	0.2644	4.5411e-10
PAAD	DEL	0.1196	0.13216
READ	DEL	0.4424	0.025797
SARC	DEL	0.1829	0.18974
SKCM	DEL	0.2207	3.6878e-13
UCEC	DEL	0.2301	7.1012e-08

Survival Analysis

Cancer	P-value	Q-value
THYM	0.0079	Kaplan-Meier Survival Analysis
KIRC	0.0034	Kaplan-Meier Survival Analysis
SARC	0.015	Kaplan-Meier Survival Analysis
MESO	0.028	Kaplan-Meier Survival Analysis
HNSC	0.037	Kaplan-Meier Survival Analysis
BRCA	0.036	Kaplan-Meier Survival Analysis
COAD	0.0033	Kaplan-Meier Survival Analysis
BLCA	0.00021	Kaplan-Meier Survival Analysis
CESC	0.013	Kaplan-Meier Survival Analysis
LIHC	0.0072	Kaplan-Meier Survival Analysis
LUAD	0.0026	Kaplan-Meier Survival Analysis
UVM	0.0062	Kaplan-Meier Survival Analysis
OV	0.022	Kaplan-Meier Survival Analysis

Description

RBDs

Literatures

Expression

Transcripts

Gene Model

GWAS

PPI

Paralog

Ortholog

Gene Ontology

Description

Ensembl ID: ENSG00000229474 (Gene tree)
Gene ID: 197135
Gene Symbol: PATL2
Alias: Pat1a
Full Name: PAT1 homolog 2
Gene Type: protein_coding
Specie: Homo_sapiens
Strand: Minus strand
Length: 45,661 bases
Position: chr15:44,665,732-44,711,392
Accession: 33630
Summary: (PAT1 Homolog 2) is a Protein Coding gene. Diseases associated with PATL2 include Oocyte Maturation Defect 4 and Female Infertility Due To Oocyte Meiotic Arrest. Gene Ontology (GO) annotations related to this gene include RNA binding. An important paralog of this gene is PATL1.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000416673	PAT1	PF09770.9	9.4e-14	1	1
ENSP00000453915	PAT1	PF09770.9	9.4e-14	1	1
ENSP00000453695	PAT1	PF09770.9	3.1e-13	1	1

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
29661911	PATL2 is a key actor of oocyte maturation whose invalidation causes infertility in women and mice.	EMBO Mol Med	2018 May	Christou-Kent M	doi: 10.15252/emmm.201708515.
29697801	Novel mutations in PATL2 cause female infertility with oocyte germinal vesicle arrest.	Hum Reprod	2018 Jun 1	Huang L	doi: 10.1093/humrep/dey100.

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000558809	PATL2-205	531	-	ENSP00000453723	158 (aa)	-	H0YMS5
ENST00000434130	PATL2-201	1950	XM_011521336	ENSP00000416673	543 (aa)	XP_011519638	C9JE40
ENST00000558159	PATL2-202	867	-	-	- (aa)	-	-
ENST00000560110	PATL2-206	765	-	ENSP00000453898	125 (aa)	-	H0YN77
ENST00000560775	PATL2-207	1913	XM_011521338	ENSP00000453915	543 (aa)	XP_011519640	C9JE40
ENST00000558573	PATL2-204	2100	-	-	- (aa)	-	-
ENST00000558481	PATL2-203	845	-	ENSP00000454201	188 (aa)	-	H0YNY1
ENST00000560780	PATL2-208	1863	XM_011521347	ENSP00000453695	354 (aa)	XP_011519649	H0YMQ2
ENST00000561082	PATL2-209	559	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000229474's gene model file

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000229474	rs181576645	15	44707278	?	Urinary tract infection frequency	28928442	[0.23-0.5] unit decrease	0.3635	EFO_0008413

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000229474's network

Paralog

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000229474	PATL2	99	36.538	ENSG00000166889	PATL1	63	34.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy	Species
ENSG00000229474	PATL2	100	46.154	ENSAPOG00000022988	patl2	61	43.478	Acanthochromis_polyacanthus
ENSG00000229474	PATL2	99	38.017	ENSAPOG00000021290	patl1	55	37.561	Acanthochromis_polyacanthus
ENSG00000229474	PATL2	99	91.117	ENSAMEG00000014997	PATL2	92	87.708	Ailuropoda_melanoleuca
ENSG00000229474	PATL2	99	36.785	ENSAMEG00000014215	PATL1	63	34.969	Ailuropoda_melanoleuca
ENSG00000229474	PATL2	99	37.778	ENSACIG00000005182	patl1	54	37.346	Amphilophus_citrinellus
ENSG00000229474	PATL2	99	47.091	ENSAOCG00000023738	patl2	54	44.521	Amphiprion_ocellaris
ENSG00000229474	PATL2	99	38.227	ENSAOCG00000021993	patl1	52	37.931	Amphiprion_ocellaris
ENSG00000229474	PATL2	99	38.017	ENSAPEG00000021391	patl1	50	37.561	Amphiprion_percula
ENSG00000229474	PATL2	99	47.863	ENSAPEG00000011299	patl2	65	45.093	Amphiprion_percula
ENSG00000229474	PATL2	99	47.324	ENSATEG00000019567	patl2	64	46.226	Anabas_testudineus
ENSG00000229474	PATL2	99	55.556	ENSAPLG00000003980	PATL2	73	53.468	Anas_platyrhynchos
ENSG00000229474	PATL2	75	38.542	ENSAPLG00000013394	PATL1	52	41.154	Anas_platyrhynchos
ENSG00000229474	PATL2	75	53.506	ENSACAG00000006951	-	100	49.330	Anolis_carolinensis
ENSG00000229474	PATL2	99	37.398	ENSACAG00000006607	PATL1	59	35.714	Anolis_carolinensis
ENSG00000229474	PATL2	99	37.088	ENSANAG00000023078	PATL1	63	34.623	Aotus_nancymaae
ENSG00000229474	PATL2	100	94.350	ENSANAG00000022701	PATL2	100	89.541	Aotus_nancymaae
ENSG00000229474	PATL2	99	47.075	ENSACLG00000010326	patl2	60	45.089	Astatotilapia_calliptera
ENSG00000229474	PATL2	99	38.251	ENSAMXG00000010731	patl1	53	37.101	Astyanax_mexicanus
ENSG00000229474	PATL2	100	47.619	ENSAMXG00000020293	patl2	71	42.052	Astyanax_mexicanus
ENSG00000229474	PATL2	99	36.538	ENSBTAG00000005913	PATL1	63	33.881	Bos_taurus
ENSG00000229474	PATL2	99	83.003	ENSBTAG00000001558	PATL2	99	83.003	Bos_taurus
ENSG00000229474	PATL2	99	37.088	ENSCJAG00000016192	PATL1	63	34.694	Callithrix_jacchus
ENSG00000229474	PATL2	100	92.938	ENSCJAG00000002379	PATL2	100	88.321	Callithrix_jacchus
ENSG00000229474	PATL2	99	36.538	ENSCAFG00000007581	PATL1	63	34.774	Canis_familiaris
ENSG00000229474	PATL2	100	90.113	ENSCAFG00000013629	PATL2	99	81.633	Canis_familiaris
ENSG00000229474	PATL2	100	90.113	ENSCAFG00020022169	PATL2	99	81.701	Canis_lupus_dingo
ENSG00000229474	PATL2	99	36.639	ENSCAFG00020001648	PATL1	65	34.433	Canis_lupus_dingo
ENSG00000229474	PATL2	99	36.538	ENSCHIG00000025913	PATL1	64	33.951	Capra_hircus
ENSG00000229474	PATL2	99	83.569	ENSCHIG00000026665	PATL2	99	74.589	Capra_hircus
ENSG00000229474	PATL2	99	36.915	ENSTSYG00000012748	PATL1	62	34.356	Carlito_syrichta
ENSG00000229474	PATL2	100	85.311	ENSTSYG00000032456	PATL2	100	81.400	Carlito_syrichta
ENSG00000229474	PATL2	99	36.813	ENSCAPG00000013668	PATL1	62	34.356	Cavia_aperea
ENSG00000229474	PATL2	93	83.891	ENSCPOG00000002922	PATL2	91	78.178	Cavia_porcellus
ENSG00000229474	PATL2	99	36.813	ENSCPOG00000006827	PATL1	64	33.069	Cavia_porcellus
ENSG00000229474	PATL2	99	37.088	ENSCCAG00000023759	PATL1	63	34.623	Cebus_capucinus
ENSG00000229474	PATL2	99	92.351	ENSCCAG00000025261	PATL2	100	86.900	Cebus_capucinus
ENSG00000229474	PATL2	99	37.088	ENSCATG00000009629	PATL1	63	34.827	Cercocebus_atys
ENSG00000229474	PATL2	100	97.175	ENSCATG00000034794	PATL2	100	97.175	Cercocebus_atys
ENSG00000229474	PATL2	93	85.455	ENSCLAG00000014407	PATL2	99	72.744	Chinchilla_lanigera
ENSG00000229474	PATL2	99	37.637	ENSCLAG00000003427	PATL1	63	35.102	Chinchilla_lanigera
ENSG00000229474	PATL2	100	96.893	ENSCSAG00000009601	PATL2	99	93.878	Chlorocebus_sabaeus
ENSG00000229474	PATL2	99	37.088	ENSCSAG00000006095	PATL1	70	34.827	Chlorocebus_sabaeus
ENSG00000229474	PATL2	99	36.915	ENSCHOG00000001611	PATL1	66	36.232	Choloepus_hoffmanni
ENSG00000229474	PATL2	99	56.780	ENSCPBG00000006150	PATL2	77	50.775	Chrysemys_picta_bellii
ENSG00000229474	PATL2	80	32.215	ENSCSAVG00000002430	-	77	31.879	Ciona_savignyi
ENSG00000229474	PATL2	99	37.088	ENSCANG00000039197	PATL1	63	34.827	Colobus_angolensis_palliatus
ENSG00000229474	PATL2	100	96.328	ENSCANG00000013856	PATL2	100	92.818	Colobus_angolensis_palliatus
ENSG00000229474	PATL2	99	37.637	ENSCGRG00001024927	Patl1	63	35.510	Cricetulus_griseus_chok1gshd
ENSG00000229474	PATL2	93	79.697	ENSCGRG00001010801	Patl2	100	67.803	Cricetulus_griseus_chok1gshd
ENSG00000229474	PATL2	99	37.637	ENSCGRG00000000461	Patl1	63	35.510	Cricetulus_griseus_crigri
ENSG00000229474	PATL2	93	79.697	ENSCGRG00000013007	Patl2	100	67.803	Cricetulus_griseus_crigri
ENSG00000229474	PATL2	99	39.344	ENSCSEG00000008261	patl1	60	37.303	Cynoglossus_semilaevis
ENSG00000229474	PATL2	99	48.760	ENSCSEG00000009438	patl2	60	45.516	Cynoglossus_semilaevis
ENSG00000229474	PATL2	99	39.718	ENSCVAG00000016203	patl2	60	39.594	Cyprinodon_variegatus
ENSG00000229474	PATL2	99	36.088	ENSCVAG00000006664	patl1	54	35.309	Cyprinodon_variegatus
ENSG00000229474	PATL2	100	48.333	ENSDARG00000089567	patl2	56	47.619	Danio_rerio
ENSG00000229474	PATL2	99	38.315	ENSDARG00000017423	patl1	51	37.157	Danio_rerio
ENSG00000229474	PATL2	99	36.538	ENSDNOG00000038865	PATL1	88	34.082	Dasypus_novemcinctus
ENSG00000229474	PATL2	100	88.136	ENSDNOG00000036837	PATL2	95	80.721	Dasypus_novemcinctus
ENSG00000229474	PATL2	99	37.637	ENSDORG00000000237	Patl1	63	35.102	Dipodomys_ordii
ENSG00000229474	PATL2	93	80.000	ENSDORG00000026649	Patl2	98	66.983	Dipodomys_ordii
ENSG00000229474	PATL2	100	82.203	ENSETEG00000005068	PATL2	99	82.203	Echinops_telfairi
ENSG00000229474	PATL2	99	37.088	ENSEASG00005007963	PATL1	65	34.497	Equus_asinus_asinus
ENSG00000229474	PATL2	100	86.441	ENSEASG00005017984	PATL2	100	79.304	Equus_asinus_asinus
ENSG00000229474	PATL2	99	37.363	ENSECAG00000011411	PATL1	63	34.908	Equus_caballus
ENSG00000229474	PATL2	100	90.395	ENSECAG00000013462	PATL2	100	82.418	Equus_caballus
ENSG00000229474	PATL2	99	47.222	ENSELUG00000023244	patl2	62	43.154	Esox_lucius
ENSG00000229474	PATL2	99	38.692	ENSELUG00000024249	patl1	53	37.619	Esox_lucius
ENSG00000229474	PATL2	99	36.538	ENSFCAG00000015573	PATL1	63	34.774	Felis_catus
ENSG00000229474	PATL2	100	88.418	ENSFCAG00000027170	PATL2	100	81.400	Felis_catus
ENSG00000229474	PATL2	98	54.958	ENSFALG00000009768	PATL2	63	53.898	Ficedula_albicollis
ENSG00000229474	PATL2	99	37.705	ENSFALG00000012150	PATL1	54	36.779	Ficedula_albicollis
ENSG00000229474	PATL2	99	36.813	ENSFDAG00000016128	PATL1	63	34.774	Fukomys_damarensis
ENSG00000229474	PATL2	93	79.697	ENSFDAG00000012242	PATL2	90	74.573	Fukomys_damarensis
ENSG00000229474	PATL2	90	42.857	ENSFHEG00000009727	patl2	61	42.271	Fundulus_heteroclitus
ENSG00000229474	PATL2	99	44.444	ENSGMOG00000005666	patl2	99	42.506	Gadus_morhua
ENSG00000229474	PATL2	99	55.556	ENSGALG00000002167	PATL2	57	53.675	Gallus_gallus
ENSG00000229474	PATL2	99	37.602	ENSGALG00000042641	PATL1	54	36.842	Gallus_gallus
ENSG00000229474	PATL2	99	46.814	ENSGAFG00000019344	patl2	60	45.266	Gambusia_affinis
ENSG00000229474	PATL2	99	38.904	ENSGACG00000016448	patl1	64	35.425	Gasterosteus_aculeatus
ENSG00000229474	PATL2	99	37.228	ENSGAGG00000004461	PATL1	59	36.516	Gopherus_agassizii
ENSG00000229474	PATL2	100	99.435	ENSGGOG00000025923	PATL2	100	98.711	Gorilla_gorilla
ENSG00000229474	PATL2	99	36.915	ENSGGOG00000004335	PATL1	65	34.765	Gorilla_gorilla
ENSG00000229474	PATL2	99	47.324	ENSHBUG00000005929	patl2	68	44.921	Haplochromis_burtoni
ENSG00000229474	PATL2	93	78.635	ENSHGLG00000017415	-	100	69.630	Heterocephalus_glaber_female
ENSG00000229474	PATL2	99	37.363	ENSHGLG00000018173	PATL1	63	36.122	Heterocephalus_glaber_female
ENSG00000229474	PATL2	93	78.932	ENSHGLG00100008419	-	100	68.807	Heterocephalus_glaber_male
ENSG00000229474	PATL2	99	37.363	ENSHGLG00100003453	PATL1	64	36.122	Heterocephalus_glaber_male
ENSG00000229474	PATL2	99	46.537	ENSHCOG00000016754	patl2	57	44.064	Hippocampus_comes
ENSG00000229474	PATL2	99	37.158	ENSHCOG00000001898	patl1	53	35.698	Hippocampus_comes
ENSG00000229474	PATL2	100	45.833	ENSIPUG00000020692	patl2	63	44.244	Ictalurus_punctatus
ENSG00000229474	PATL2	100	85.876	ENSSTOG00000033848	PATL2	100	78.832	Ictidomys_tridecemlineatus
ENSG00000229474	PATL2	99	37.088	ENSSTOG00000013764	PATL1	63	34.827	Ictidomys_tridecemlineatus
ENSG00000229474	PATL2	99	36.813	ENSJJAG00000010135	Patl1	63	35.294	Jaculus_jaculus
ENSG00000229474	PATL2	99	46.537	ENSKMAG00000021275	patl2	57	44.444	Kryptolebias_marmoratus
ENSG00000229474	PATL2	99	46.849	ENSLBEG00000022344	patl2	56	44.295	Labrus_bergylta
ENSG00000229474	PATL2	99	37.741	ENSLBEG00000023617	patl1	51	36.261	Labrus_bergylta
ENSG00000229474	PATL2	99	47.200	ENSLACG00000005291	-	60	44.561	Latimeria_chalumnae
ENSG00000229474	PATL2	89	36.503	ENSLACG00000004640	PATL1	56	34.634	Latimeria_chalumnae
ENSG00000229474	PATL2	99	38.251	ENSLOCG00000000717	patl1	53	36.386	Lepisosteus_oculatus
ENSG00000229474	PATL2	93	85.976	ENSLAFG00000031124	PATL2	98	70.350	Loxodonta_africana
ENSG00000229474	PATL2	99	36.915	ENSLAFG00000015161	PATL1	63	34.639	Loxodonta_africana
ENSG00000229474	PATL2	99	37.088	ENSMFAG00000040851	PATL1	63	34.827	Macaca_fascicularis
ENSG00000229474	PATL2	100	97.175	ENSMFAG00000003565	PATL2	99	95.911	Macaca_fascicularis
ENSG00000229474	PATL2	99	37.088	ENSMMUG00000017287	PATL1	63	34.827	Macaca_mulatta
ENSG00000229474	PATL2	100	96.893	ENSMMUG00000014294	PATL2	100	96.893	Macaca_mulatta
ENSG00000229474	PATL2	99	37.088	ENSMNEG00000038692	PATL1	63	34.827	Macaca_nemestrina
ENSG00000229474	PATL2	100	96.893	ENSMNEG00000034510	PATL2	100	95.396	Macaca_nemestrina
ENSG00000229474	PATL2	99	37.088	ENSMLEG00000030044	PATL1	63	34.827	Mandrillus_leucophaeus
ENSG00000229474	PATL2	100	97.175	ENSMLEG00000042248	PATL2	100	95.396	Mandrillus_leucophaeus
ENSG00000229474	PATL2	99	38.798	ENSMAMG00000003950	patl1	53	37.561	Mastacembelus_armatus
ENSG00000229474	PATL2	98	46.000	ENSMAMG00000013327	patl2	64	45.324	Mastacembelus_armatus
ENSG00000229474	PATL2	99	47.075	ENSMZEG00005014292	patl2	60	45.089	Maylandia_zebra
ENSG00000229474	PATL2	82	38.961	ENSMGAG00000003406	PATL1	55	36.700	Meleagris_gallopavo
ENSG00000229474	PATL2	99	54.131	ENSMGAG00000001309	PATL2	83	49.405	Meleagris_gallopavo
ENSG00000229474	PATL2	99	80.229	ENSMAUG00000001008	Patl2	100	67.642	Mesocricetus_auratus
ENSG00000229474	PATL2	100	87.571	ENSMICG00000005037	PATL2	100	87.571	Microcebus_murinus
ENSG00000229474	PATL2	99	34.426	ENSMICG00000004172	PATL1	61	32.653	Microcebus_murinus
ENSG00000229474	PATL2	99	37.637	ENSMOCG00000010087	Patl1	63	35.102	Microtus_ochrogaster
ENSG00000229474	PATL2	96	79.118	ENSMOCG00000015367	Patl2	89	71.548	Microtus_ochrogaster
ENSG00000229474	PATL2	99	41.457	ENSMMOG00000001299	patl2	59	41.058	Mola_mola
ENSG00000229474	PATL2	99	38.333	ENSMMOG00000013711	patl1	56	36.962	Mola_mola
ENSG00000229474	PATL2	99	37.088	ENSMODG00000020201	PATL1	67	34.104	Monodelphis_domestica
ENSG00000229474	PATL2	99	74.432	ENSMODG00000017690	PATL2	87	71.690	Monodelphis_domestica
ENSG00000229474	PATL2	99	39.344	ENSMALG00000018706	patl1	53	39.084	Monopterus_albus
ENSG00000229474	PATL2	99	46.814	ENSMALG00000008131	patl2	55	45.476	Monopterus_albus
ENSG00000229474	PATL2	99	37.363	MGP_CAROLIEiJ_G0022739	Patl1	63	34.827	Mus_caroli
ENSG00000229474	PATL2	96	80.000	MGP_CAROLIEiJ_G0024205	Patl2	100	67.993	Mus_caroli
ENSG00000229474	PATL2	99	37.363	ENSMUSG00000046139	Patl1	63	34.623	Mus_musculus
ENSG00000229474	PATL2	93	79.091	ENSMUSG00000027233	Patl2	98	67.283	Mus_musculus
ENSG00000229474	PATL2	96	79.412	MGP_PahariEiJ_G0025648	Patl2	100	68.240	Mus_pahari
ENSG00000229474	PATL2	99	37.363	MGP_PahariEiJ_G0014233	Patl1	63	34.827	Mus_pahari
ENSG00000229474	PATL2	99	37.363	MGP_SPRETEiJ_G0023652	Patl1	63	34.827	Mus_spretus
ENSG00000229474	PATL2	96	79.706	MGP_SPRETEiJ_G0025122	Patl2	100	68.297	Mus_spretus
ENSG00000229474	PATL2	99	36.538	ENSMPUG00000014607	PATL1	63	34.568	Mustela_putorius_furo
ENSG00000229474	PATL2	99	37.088	ENSMLUG00000011169	PATL1	65	34.969	Myotis_lucifugus
ENSG00000229474	PATL2	93	75.375	ENSNGAG00000020368	Patl2	92	69.874	Nannospalax_galili
ENSG00000229474	PATL2	99	36.538	ENSNGAG00000003682	Patl1	63	34.141	Nannospalax_galili
ENSG00000229474	PATL2	99	47.619	ENSNBRG00000011745	patl2	65	45.598	Neolamprologus_brichardi
ENSG00000229474	PATL2	100	97.458	ENSNLEG00000005673	PATL2	100	93.923	Nomascus_leucogenys
ENSG00000229474	PATL2	99	36.915	ENSNLEG00000013081	PATL1	65	34.560	Nomascus_leucogenys
ENSG00000229474	PATL2	90	34.731	ENSMEUG00000009391	PATL1	50	35.152	Notamacropus_eugenii
ENSG00000229474	PATL2	99	38.187	ENSOPRG00000007963	PATL1	56	38.649	Ochotona_princeps
ENSG00000229474	PATL2	99	38.441	ENSONIG00000004170	patl1	54	36.232	Oreochromis_niloticus
ENSG00000229474	PATL2	99	47.354	ENSONIG00000011519	patl2	60	45.089	Oreochromis_niloticus
ENSG00000229474	PATL2	99	36.639	ENSOANG00000011117	-	90	37.097	Ornithorhynchus_anatinus
ENSG00000229474	PATL2	93	65.663	ENSOANG00000001538	-	100	61.758	Ornithorhynchus_anatinus
ENSG00000229474	PATL2	94	87.349	ENSOCUG00000006339	PATL2	99	71.956	Oryctolagus_cuniculus
ENSG00000229474	PATL2	99	37.088	ENSOCUG00000002156	PATL1	63	34.756	Oryctolagus_cuniculus
ENSG00000229474	PATL2	99	45.429	ENSORLG00000005780	patl2	60	43.213	Oryzias_latipes
ENSG00000229474	PATL2	99	46.260	ENSORLG00020016506	patl2	61	43.074	Oryzias_latipes_hni
ENSG00000229474	PATL2	98	37.912	ENSORLG00015022240	patl1	51	37.192	Oryzias_latipes_hsok
ENSG00000229474	PATL2	99	45.429	ENSORLG00015014500	patl2	61	43.111	Oryzias_latipes_hsok
ENSG00000229474	PATL2	99	45.706	ENSOMEG00000021628	patl2	66	42.398	Oryzias_melastigma
ENSG00000229474	PATL2	100	85.070	ENSOGAG00000004709	PATL2	99	78.810	Otolemur_garnettii
ENSG00000229474	PATL2	99	37.912	ENSOGAG00000004351	PATL1	63	35.306	Otolemur_garnettii
ENSG00000229474	PATL2	93	83.841	ENSOARG00000003762	PATL2	96	71.591	Ovis_aries
ENSG00000229474	PATL2	99	36.538	ENSOARG00000012005	PATL1	61	34.156	Ovis_aries
ENSG00000229474	PATL2	99	36.538	ENSPPAG00000034275	PATL1	64	34.420	Pan_paniscus
ENSG00000229474	PATL2	100	99.435	ENSPPAG00000007221	PATL2	100	98.716	Pan_paniscus
ENSG00000229474	PATL2	100	88.418	ENSPPRG00000004279	PATL2	100	81.768	Panthera_pardus
ENSG00000229474	PATL2	99	36.538	ENSPPRG00000020639	PATL1	63	34.774	Panthera_pardus
ENSG00000229474	PATL2	100	88.418	ENSPTIG00000018964	PATL2	100	81.215	Panthera_tigris_altaica
ENSG00000229474	PATL2	99	36.538	ENSPTIG00000019298	PATL1	63	34.774	Panthera_tigris_altaica
ENSG00000229474	PATL2	99	32.782	ENSPTRG00000003697	PATL1	55	32.477	Pan_troglodytes
ENSG00000229474	PATL2	100	99.718	ENSPTRG00000041536	PATL2	100	98.899	Pan_troglodytes
ENSG00000229474	PATL2	99	37.088	ENSPANG00000035620	PATL1	63	34.827	Papio_anubis
ENSG00000229474	PATL2	100	97.175	ENSPANG00000018026	PATL2	100	94.107	Papio_anubis
ENSG00000229474	PATL2	99	38.567	ENSPKIG00000016224	patl1	53	37.562	Paramormyrops_kingsleyae
ENSG00000229474	PATL2	99	49.862	ENSPKIG00000016887	patl2	62	45.652	Paramormyrops_kingsleyae
ENSG00000229474	PATL2	99	37.772	ENSPSIG00000016206	PATL1	60	34.400	Pelodiscus_sinensis
ENSG00000229474	PATL2	99	50.562	ENSPSIG00000017690	PATL2	94	51.187	Pelodiscus_sinensis
ENSG00000229474	PATL2	99	38.525	ENSPMGG00000002644	patl1	52	38.293	Periophthalmus_magnuspinnatus
ENSG00000229474	PATL2	98	44.633	ENSPMGG00000014550	patl2	67	43.387	Periophthalmus_magnuspinnatus
ENSG00000229474	PATL2	93	80.547	ENSPEMG00000016509	Patl2	87	74.249	Peromyscus_maniculatus_bairdii
ENSG00000229474	PATL2	99	37.637	ENSPEMG00000014215	Patl1	63	35.102	Peromyscus_maniculatus_bairdii
ENSG00000229474	PATL2	99	37.088	ENSPCIG00000010852	PATL1	67	34.038	Phascolarctos_cinereus
ENSG00000229474	PATL2	96	72.727	ENSPCIG00000018256	PATL2	90	66.947	Phascolarctos_cinereus
ENSG00000229474	PATL2	100	46.978	ENSPFOG00000007305	patl2	59	45.266	Poecilia_formosa
ENSG00000229474	PATL2	99	39.344	ENSPFOG00000007768	patl1	55	37.472	Poecilia_formosa
ENSG00000229474	PATL2	99	39.071	ENSPLAG00000018465	patl1	50	38.235	Poecilia_latipinna
ENSG00000229474	PATL2	100	46.978	ENSPLAG00000020713	patl2	59	45.266	Poecilia_latipinna
ENSG00000229474	PATL2	99	39.071	ENSPMEG00000006555	patl1	50	38.235	Poecilia_mexicana
ENSG00000229474	PATL2	100	46.978	ENSPMEG00000018942	patl2	59	45.266	Poecilia_mexicana
ENSG00000229474	PATL2	74	47.253	ENSPREG00000023066	patl2	53	45.538	Poecilia_reticulata
ENSG00000229474	PATL2	99	37.088	ENSPPYG00000003230	PATL1	63	34.623	Pongo_abelii
ENSG00000229474	PATL2	99	86.686	ENSPCOG00000000295	PATL2	99	86.686	Propithecus_coquereli
ENSG00000229474	PATL2	99	37.088	ENSPCOG00000020770	PATL1	65	34.694	Propithecus_coquereli
ENSG00000229474	PATL2	92	33.628	ENSPVAG00000015239	PATL1	73	31.546	Pteropus_vampyrus
ENSG00000229474	PATL2	99	47.324	ENSPNYG00000017381	patl2	68	44.695	Pundamilia_nyererei
ENSG00000229474	PATL2	99	39.011	ENSPNAG00000017907	patl1	54	36.712	Pygocentrus_nattereri
ENSG00000229474	PATL2	99	49.292	ENSPNAG00000002315	patl2	64	45.536	Pygocentrus_nattereri
ENSG00000229474	PATL2	99	37.088	ENSRNOG00000021052	Patl1	63	34.827	Rattus_norvegicus
ENSG00000229474	PATL2	93	78.963	ENSRNOG00000017061	Patl2	98	66.791	Rattus_norvegicus
ENSG00000229474	PATL2	100	94.915	ENSRBIG00000040369	PATL2	100	93.186	Rhinopithecus_bieti
ENSG00000229474	PATL2	100	95.198	ENSRROG00000028786	PATL2	100	93.370	Rhinopithecus_roxellana
ENSG00000229474	PATL2	99	37.088	ENSRROG00000032861	PATL1	63	34.827	Rhinopithecus_roxellana
ENSG00000229474	PATL2	99	36.813	ENSSBOG00000025195	PATL1	64	34.420	Saimiri_boliviensis_boliviensis
ENSG00000229474	PATL2	99	92.351	ENSSBOG00000034766	PATL2	100	87.339	Saimiri_boliviensis_boliviensis
ENSG00000229474	PATL2	99	37.363	ENSSHAG00000004309	PATL1	53	36.232	Sarcophilus_harrisii
ENSG00000229474	PATL2	99	49.311	ENSSFOG00015000720	patl2	58	47.100	Scleropages_formosus
ENSG00000229474	PATL2	99	39.011	ENSSFOG00015009614	patl1	52	37.406	Scleropages_formosus
ENSG00000229474	PATL2	99	38.798	ENSSMAG00000009482	patl1	51	36.854	Scophthalmus_maximus
ENSG00000229474	PATL2	99	46.978	ENSSMAG00000017262	patl2	66	43.418	Scophthalmus_maximus
ENSG00000229474	PATL2	99	46.537	ENSSDUG00000022927	patl2	56	44.342	Seriola_dumerili
ENSG00000229474	PATL2	99	38.292	ENSSDUG00000005362	patl1	50	36.425	Seriola_dumerili
ENSG00000229474	PATL2	98	46.067	ENSSLDG00000017922	patl2	65	44.037	Seriola_lalandi_dorsalis
ENSG00000229474	PATL2	99	38.292	ENSSLDG00000019146	patl1	50	36.425	Seriola_lalandi_dorsalis
ENSG00000229474	PATL2	93	79.394	ENSSARG00000009047	PATL2	94	73.573	Sorex_araneus
ENSG00000229474	PATL2	99	36.538	ENSSARG00000009600	PATL1	63	34.292	Sorex_araneus
ENSG00000229474	PATL2	98	58.640	ENSSPUG00000019065	PATL2	100	57.507	Sphenodon_punctatus
ENSG00000229474	PATL2	99	37.500	ENSSPUG00000009453	PATL1	54	36.905	Sphenodon_punctatus
ENSG00000229474	PATL2	98	44.875	ENSSPAG00000004784	patl2	64	43.091	Stegastes_partitus
ENSG00000229474	PATL2	99	38.017	ENSSPAG00000003187	patl1	56	36.629	Stegastes_partitus
ENSG00000229474	PATL2	99	36.538	ENSSSCG00000013124	PATL1	73	34.497	Sus_scrofa
ENSG00000229474	PATL2	54	56.477	ENSTGUG00000015050	-	97	55.851	Taeniopygia_guttata
ENSG00000229474	PATL2	93	55.988	ENSTGUG00000004619	-	97	55.118	Taeniopygia_guttata
ENSG00000229474	PATL2	99	37.875	ENSTGUG00000006222	PATL1	54	36.538	Taeniopygia_guttata
ENSG00000229474	PATL2	99	37.293	ENSTRUG00000000709	patl1	56	36.073	Takifugu_rubripes
ENSG00000229474	PATL2	99	46.961	ENSTRUG00000005647	patl2	64	44.105	Takifugu_rubripes
ENSG00000229474	PATL2	99	37.363	ENSTTRG00000009389	PATL1	56	37.838	Tursiops_truncatus
ENSG00000229474	PATL2	100	91.243	ENSUAMG00000018533	PATL2	100	84.095	Ursus_americanus
ENSG00000229474	PATL2	100	90.678	ENSUMAG00000007738	PATL2	100	83.729	Ursus_maritimus
ENSG00000229474	PATL2	99	36.364	ENSUMAG00000018634	PATL1	71	34.497	Ursus_maritimus
ENSG00000229474	PATL2	90	34.132	ENSVPAG00000009224	PATL1	50	33.735	Vicugna_pacos
ENSG00000229474	PATL2	99	36.538	ENSVVUG00000016668	PATL1	70	34.774	Vulpes_vulpes
ENSG00000229474	PATL2	100	89.266	ENSVVUG00000011576	PATL2	99	80.627	Vulpes_vulpes
ENSG00000229474	PATL2	99	46.927	ENSXETG00000014167	patl2	76	45.714	Xenopus_tropicalis
ENSG00000229474	PATL2	98	38.462	ENSXCOG00000010808	patl1	70	37.685	Xiphophorus_couchianus
ENSG00000229474	PATL2	99	46.721	ENSXMAG00000018464	patl2	58	44.419	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0005515	protein binding	20584987.	IPI	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	20584987.	IDA	Component
GO:0010607	negative regulation of cytoplasmic mRNA processing body assembly	-	IEA	Process
GO:0017148	negative regulation of translation	-	ISS	Process
GO:0033962	cytoplasmic mRNA processing body assembly	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	-	ISS	Component

Note: Click here to get the extension of tumor abbreviations.

Note: to get the extension of tumor abbreviations.