EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1424416781Missense_MutationnovelE1678K0.19
BLCAchr1424408923SilentNAL377L0.28
BLCAchr1424409283Missense_MutationNAD497N0.22
BLCAchr1424416607Nonsense_MutationnovelE1620*0.35
BLCAchr1424417149SilentnovelL1800L0.06
BLCAchr1424409304Missense_MutationnovelD504H0.06
BLCAchr1424415775SilentNAS1342S0.46
BLCAchr1424411199Frame_Shift_Delnovel0.08
BLCAchr1424408317Missense_MutationnovelS216F0.32
BLCAchr1424415574Silentrs780717857L1275L0.15
BLCAchr1424415913SilentnovelL1388L0.47
BLCAchr1424411202SilentnovelV847V0.23
BLCAchr1424414912Missense_MutationnovelD1055H0.39
BLCAchr1424411190SilentNAK843K0.2
BLCAchr1424408150SilentnovelT160T0.14
BLCAchr1424415189Missense_MutationnovelS1147F0.22
BLCAchr1424408065Missense_MutationnovelN132I0.29
BLCAchr1424415653Missense_MutationnovelS1302A0.41
BLCAchr1424409037Missense_MutationnovelE415K0.21
BLCAchr1424416017Missense_MutationnovelS1423F0.23
BLCAchr1424408810Missense_MutationnovelS339L0.23
BLCAchr1424408983Missense_MutationnovelL397V0.25
BLCAchr1424414660Missense_MutationNAV971I0.43
BLCAchr1424415128Missense_MutationNAD1127N0.46
BLCAchr1424416000SilentnovelL1417L0.78
BLCAchr1424416291SilentnovelL1514L0.75
BLCAchr1424415597Missense_Mutationrs775781760R1283H0.26
BRCAchr1424411385SilentNAL859L0.56
BRCAchr1424408952Silentrs186869801A386A0.25
BRCAchr1424417001Missense_MutationnovelS1751F0.5
BRCAchr1424408103Missense_Mutationrs773733347P145A0.63
BRCAchr1424416593Missense_Mutationrs746050976S1615L0.33
BRCAchr1424417341Missense_MutationNAW1864C0.18
BRCAchr1424415459Missense_MutationNAR1237Q0.44
BRCAchr1424414867Missense_Mutationrs201775736R1040W0.31
BRCAchr1424408806Missense_MutationNAV338L0.41
BRCAchr1424414800Silentrs376159917D1017D0.34
BRCAchr1424415859SilentNAL1370L0.31
BRCAchr1424417387SilentnovelL1880L0.14
BRCAchr1424416809Missense_Mutationrs758775630R1687Q0.35
BRCAchr1424417359Missense_MutationNAE1870D0.37
BRCAchr1424408735Missense_MutationNAN314I0.15
BRCAchr1424417210In_Frame_DelnovelS1821del0.06
CESCchr1424415318Nonsense_MutationNAS1190*0.14
CESCchr1424413097Missense_Mutationrs775268808R915C0.35RNase_Zc3h12a
CESCchr1424415266Missense_MutationNAA1173T0.09
CESCchr1424407961SilentnovelL97L0.44
CESCchr1424408009Frame_Shift_DelNAP115Lfs*40.4
CESCchr1424399257Missense_MutationNAS4C0.4
CESCchr14244182513'UTRnovel0.32
CESCchr1424409965Missense_MutationnovelG724D0.41
CESCchr1424408271Missense_MutationNAD201H0.42
CESCchr1424417237Missense_MutationNAD1830H0.25
CESCchr1424417445Nonstop_MutationNA*1899Lext*1090.29
CESCchr1424417428SilentNAF1893F0.43
CESCchr1424414792Missense_MutationnovelE1015K0.43
CHOLchr1424416234Frame_Shift_DelnovelQ1496Rfs*130.4
COADchr1424415988SilentNAY1413Y0.22
COADchr1424408413Missense_Mutationrs368004631G248E0.3
COADchr1424409228Missense_MutationNAQ478H0.32
COADchr1424416034SilentNAR1429R0.21
COADchr1424416890Missense_Mutationrs367836472T1714M0.23
COADchr1424415448SilentNAS1233S0.38
COADchr1424408178Missense_Mutationrs538522298R170C0.29
COADchr1424409166Missense_MutationnovelS458G0.37
COADchr1424410146SilentnovelS784S0.21
COADchr1424416790Nonsense_MutationnovelQ1681*0.11
COADchr1424410009Missense_MutationNAF739L0.28
COADchr1424414924Frame_Shift_DelnovelA1060Qfs*550.28
COADchr1424409238Frame_Shift_DelnovelL483*0.05
COADchr1424411081Missense_MutationnovelG807D0.57RNase_Zc3h12a
COADchr1424409969SilentNAP725P0.43
COADchr1424408135Nonsense_MutationnovelW155*0.14
COADchr1424415362Frame_Shift_DelNAG1206Vfs*500.1
COADchr1424415606Frame_Shift_DelNAA1288Rfs*1520.45
COADchr1424411147Missense_MutationNAH829R0.25RNase_Zc3h12a
COADchr1424414845Silentrs748336726P1032P0.13
COADchr1424416606Silentrs150242696I1619I0.13
COADchr1424415244Silentrs369620295T1165T0.28
COADchr1424408009Frame_Shift_DelNAP115Lfs*40.53
COADchr1424408705Missense_MutationnovelV304A0.13
COADchr1424408008Frame_Shift_InsNAG116Wfs*100.23
COADchr1424408088Nonsense_Mutationrs201881306R140*0.39
COADchr1424407980Missense_MutationnovelW104G0.13
COADchr1424408152Missense_Mutationrs572906859R161Q0.71
COADchr1424416096SilentnovelA1449A0.42
COADchr1424417196Missense_MutationnovelR1816H0.25
COADchr1424416865Missense_Mutationrs762480375R1706W0.27
COADchr1424408168SilentnovelL166L0.2
COADchr1424415139Missense_MutationNAW1130C0.8
COADchr1424409667Frame_Shift_DelnovelQ626Rfs*70.37
COADchr1424417313Missense_Mutationrs775892926R1855Q0.19
DLBCchr1424409331Missense_Mutationrs748667976A513T0.13
ESCAchr1424411103SilentnovelC814C0.14
ESCAchr1424415830Missense_Mutationrs375921086G1361S0.31
GBMchr1424415957Missense_MutationnovelA1403G0.2
GBMchr1424407983Missense_MutationnovelS105C0.09
GBMchr1424409778Missense_MutationnovelA662S0.31
GBMchr1424416450SilentnovelR1567R0.44
GBMchr1424417194SilentnovelR1815R0.64
GBMchr1424416060Missense_MutationnovelF1437L0.04
GBMchr1424409094Missense_MutationNAP434T0.46
GBMchr1424408786Missense_MutationnovelK331T0.44
HNSCchr1424407924Missense_MutationNAP85L0.18
HNSCchr1424414811Missense_MutationnovelS1021C0.4
HNSCchr1424409605Frame_Shift_DelnovelT606Qfs*30.28
HNSCchr1424415807Missense_MutationnovelA1353V0.11
HNSCchr1424416158Frame_Shift_InsnovelA1471Cfs*150.11
HNSCchr1424415217SilentnovelS1156S0.3
HNSCchr1424415675Missense_MutationNAC1309Y0.46
HNSCchr1424408193Missense_MutationnovelA175T0.39
HNSCchr1424416993SilentnovelF1748F0.57
HNSCchr14243992335'UTRnovel0.23
HNSCchr1424409370Nonsense_MutationnovelQ526*0.09
HNSCchr1424416814Missense_Mutationrs532821287V1689I0.16
HNSCchr1424413077Missense_MutationnovelK908M0.5RNase_Zc3h12a
HNSCchr1424411161Missense_MutationnovelV834L0.44RNase_Zc3h12a
HNSCchr1424414928Missense_MutationNAA1060V0.07
HNSCchr1424415610SilentnovelP1287P0.28
HNSCchr1424415574Silentrs780717857L1275L0.24
HNSCchr1424415354Missense_MutationnovelP1202R0.18
KICHchr1424408089Missense_MutationNAR140Q0.38
KICHchr1424410110Silentrs751550646H772H0.23
KIRCchr1424411176Missense_MutationnovelW839G0.18RNase_Zc3h12a
KIRCchr1424409331Missense_Mutationrs748667976A513T0.16
KIRCchr1424416497In_Frame_DelnovelR1584_S1585del0.19
KIRCchr1424415795Missense_Mutationrs538061448T1349M0.49
KIRCchr1424416745Missense_MutationNAH1666N0.18
KIRCchr1424409768SilentNAA658A0.3
KIRPchr1424399412Nonsense_MutationnovelE56*0.43
KIRPchr1424415801Frame_Shift_DelnovelY1352Mfs*880.33
KIRPchr1424415831Missense_MutationNAG1361V0.32
LGGchr1424415364SilentNAG1205G0.12
LGGchr1424415366Missense_MutationNAG1206D0.39
LGGchr1424415130SilentnovelD1127D0.43
LIHCchr1424408314Missense_MutationnovelH215R0.43
LIHCchr1424415540Missense_MutationnovelD1264G0.33
LIHCchr1424408512Missense_MutationNAA281E0.25
LIHCchr1424415051Missense_Mutationrs768638091M1101T0.36
LIHCchr1424415159Missense_MutationNAA1137V0.8
LIHCchr1424413013Missense_MutationNAA887T0.49RNase_Zc3h12a
LIHCchr1424415600Missense_MutationnovelL1284Q0.2
LIHCchr1424415789Missense_MutationNAP1347L0.49
LIHCchr1424408009Frame_Shift_DelNAP115Lfs*40.33
LIHCchr1424408141SilentnovelA157A0.3
LIHCchr1424409389Missense_MutationNAQ532R0.1
LUADchr1424414593Splice_Regionnovel0.72
LUADchr1424408821Missense_MutationnovelV343L0.25
LUADchr1424409264Missense_MutationnovelQ490H0.13
LUADchr1424417247Missense_MutationnovelL1833R0.1
LUADchr1424415577Missense_MutationnovelQ1276H0.54
LUADchr1424409604Frame_Shift_InsnovelT606Nfs*970.33
LUADchr1424409003Silentrs374202114K403K0.12
LUADchr1424408877SilentnovelP361P0.42
LUADchr1424410114Missense_MutationnovelA774S0.21
LUADchr1424415331SilentNAL1194L0.39
LUADchr1424408284Missense_MutationnovelW205L0.22
LUADchr1424416363Silentrs372376012T1538T0.18
LUADchr1424414944SilentNAL1065L0.38
LUADchr1424414951Missense_MutationNAP1068S0.12
LUADchr1424409370Missense_MutationnovelQ526E0.08
LUADchr1424415610Silentrs566510965P1287P0.09
LUADchr1424416360Silentrs745461296P1537P0.28
LUADchr1424415705Missense_Mutationrs776363411R1319L0.16
LUADchr1424417311Missense_MutationnovelD1854E0.19
LUADchr1424408395Missense_MutationnovelG242V0.2
LUADchr1424416082Missense_MutationNAA1445S0.15
LUADchr1424408347Missense_MutationnovelQ226L0.18
LUADchr1424414741Missense_MutationNAE998K0.12
LUADchr1424415726Missense_MutationnovelG1326V0.42
LUSCchr1424408318Frame_Shift_InsnovelD217*0.17
LUSCchr1424416806Missense_MutationnovelA1686V0.52
LUSCchr1424407891Missense_MutationNAS74I0.19
LUSCchr1424415816Missense_MutationNAA1356E0.08
LUSCchr1424399357SilentnovelV37V0.28
LUSCchr1424410129Missense_MutationnovelF779L0.11
LUSCchr1424408229Nonsense_MutationNAE187*0.44
LUSCchr1424417009Missense_Mutationrs756219353D1754Y0.12
LUSCchr1424415486Frame_Shift_InsnovelR1248Pfs*560.45
LUSCchr1424408841SilentNAA349A0.19
LUSCchr1424414951Missense_MutationNAP1068S0.59
LUSCchr1424408414SilentNAG248G0.43
LUSCchr1424409980Missense_MutationnovelG729D0.16
LUSCchr1424417341Missense_MutationnovelW1864C0.3
LUSCchr1424415351Missense_MutationnovelG1201V0.27
LUSCchr1424410146SilentnovelS784S0.38
LUSCchr1424410155Silentrs755011424P787P0.48
MESOchr14244183363'UTRnovel0.5
OVchr1424415884Missense_MutationnovelN1379H0.06
OVchr1424416358Missense_MutationnovelP1537T0.57
OVchr1424414928Frame_Shift_InsnovelA1061Lfs*90.04
OVchr1424408124SilentnovelR152R0.09
OVchr1424414672Missense_MutationnovelS975G0.06
OVchr1424414883Frame_Shift_InsnovelH1045Qfs*760.03
OVchr1424408500Missense_Mutationrs758876637P277L0.43
OVchr1424417095Missense_MutationnovelE1782D0.06
OVchr1424417239Missense_MutationnovelD1830E0.12
OVchr1424415818Missense_MutationnovelA1357T0.11
PAADchr1424399440Missense_MutationnovelA65V0.15
PAADchr1424407884Missense_MutationNAL72M0.21
PAADchr1424411387Missense_MutationnovelK860T0.21RNase_Zc3h12a
PAADchr1424414911SilentNAI1054I0.17
PAADchr1424415596Missense_Mutationrs374730919R1283C0.17
PAADchr1424416258SilentnovelG1503G0.17
PAADchr1424417173Silentrs774398259A1808A0.16
PAADchr1424408001Missense_MutationnovelV111L0.27
PCPGchr1424409983Missense_MutationnovelT730I0.65
PRADchr1424407884Missense_MutationNAL72M0.16
PRADchr1424415129Missense_MutationnovelD1127A0.14
PRADchr1424416113Missense_MutationNAW1455S0.34
PRADchr1424408974Missense_MutationNAQ394K0.28
PRADchr1424415026Missense_Mutationrs777933278A1093T0.19
PRADchr1424408089Missense_MutationNAR140Q0.28
READchr1424415748SilentNAS1333S0.31
READchr1424408088Nonsense_Mutationrs201881306R140*0.19
READchr1424414709Missense_Mutationrs373042156P987L0.1
READchr1424417059Silentrs534007372E1770E0.5
READchr1424409202Missense_MutationNAD470Y0.39
READchr1424416939SilentNAI1730I0.44
SARCchr14244180943'UTRnovel0.21
SKCMchr1424415965Missense_MutationNAP1406S0.47
SKCMchr1424415826SilentNAA1359A0.79
SKCMchr1424415408Missense_MutationNAS1220F0.38
SKCMchr1424408109Missense_MutationnovelP147S0.23
SKCMchr1424408110Missense_MutationnovelP147L0.23
SKCMchr1424415332Missense_Mutationrs777841839P1195S0.07
SKCMchr1424417295Missense_MutationnovelP1849L0.52
SKCMchr1424416642SilentNAG1631G0.45
SKCMchr1424411370SilentNAT854T0.03
SKCMchr1424408377Missense_MutationnovelS236F0.36
SKCMchr1424408827Missense_MutationnovelP345S0.31
SKCMchr1424415609Missense_MutationnovelP1287L0.59
SKCMchr1424415634SilentnovelF1295F0.2
SKCMchr1424408428Missense_MutationNAR253K0.17
SKCMchr1424415572Missense_MutationNAL1275F0.59
SKCMchr1424414849Missense_MutationNAL1034F0.62
SKCMchr1424416594Silentrs200972909S1615S0.42
SKCMchr1424417245SilentnovelV1832V0.35
SKCMchr1424414966Missense_MutationNAA1073T0.33
SKCMchr1424407914Missense_Mutationrs756142193R82C0.18
SKCMchr1424408378SilentNAS236S0.18
SKCMchr1424408907SilentNAI371I0.46
SKCMchr1424409515Missense_Mutationrs767253660R574Q0.24
SKCMchr1424409668Missense_MutationNAP625L0.29
SKCMchr1424409773Missense_MutationNAS660F0.19
SKCMchr1424411370SilentNAT854T0.33
SKCMchr1424415230Missense_Mutationrs777661158R1161C0.31
SKCMchr1424416116Nonsense_MutationNAW1456*0.39
SKCMchr1424416375SilentNAR1542R0.48
SKCMchr1424416696SilentNAF1649F0.21
SKCMchr1424416915SilentNAF1722F0.32
SKCMchr1424415408Missense_MutationNAS1220F0.41
SKCMchr1424416924SilentNAA1725A0.36
SKCMchr1424415789Missense_MutationNAP1347L0.24
SKCMchr1424415437Silentrs753861547L1230L0.43
SKCMchr1424415652SilentnovelF1301F0.33
SKCMchr1424408288SilentnovelL206L0.45
SKCMchr1424411172SilentNAP837P0.26
SKCMchr1424416311Missense_MutationNAG1521D0.69
SKCMchr1424415901SilentNAL1384L0.23
SKCMchr1424408086Missense_MutationnovelG139E0.4
SKCMchr1424408087SilentnovelG139G0.36
SKCMchr1424409468Silentrs372621872P558P0.15
SKCMchr1424416817Missense_MutationnovelL1690F0.5
SKCMchr1424417001Missense_MutationnovelS1751F0.6
SKCMchr1424414710SilentnovelP987P0.35
SKCMchr1424408436Missense_MutationNAE256K0.31
SKCMchr1424416022Missense_MutationnovelP1425S0.17
SKCMchr1424415375Missense_MutationnovelP1209L0.21
SKCMchr1424408967Silentrs755016554P391P0.27
SKCMchr1424409223Missense_MutationNAP477S0.21
SKCMchr1424414928Missense_MutationNAA1060V0.27
SKCMchr1424416030SilentNAI1427I0.28
SKCMchr1424415356Nonsense_MutationNAQ1203*0.59
SKCMchr1424415918Missense_MutationNAP1390L0.1
SKCMchr1424414695SilentNAP982P0.29
SKCMchr1424414847Missense_MutationNAS1033F0.15
SKCMchr1424415731Missense_MutationNAG1328S0.09
SKCMchr1424415736SilentnovelL1329L0.25
SKCMchr1424416129SilentnovelK1460K0.22
SKCMchr1424408089Missense_MutationNAR140Q0.68
SKCMchr1424414888Missense_Mutationrs757937013P1047S0.76
SKCMchr1424409871Missense_MutationNAT693A0.38
SKCMchr1424417206SilentNAR1819R0.34
SKCMchr1424410141SilentnovelL783L0.44
SKCMchr1424415404Missense_MutationNAF1219I0.4
SKCMchr1424415075Missense_MutationnovelP1109L0.15
SKCMchr1424416102SilentnovelG1451G0.6
SKCMchr1424415517SilentnovelI1256I0.52
SKCMchr1424408399SilentNAP243P0.61
SKCMchr1424410127Missense_MutationNAP778L0.25
SKCMchr1424415758Missense_Mutationrs371735612P1337S0.27
SKCMchr1424410038Nonsense_MutationnovelW748*0.12
SKCMchr1424407880SilentNAK70K0.42
SKCMchr1424414911SilentNAI1054I0.12
SKCMchr1424416425Missense_MutationnovelP1559L0.67
SKCMchr1424416268Missense_MutationNAF1507L0.24
SKCMchr1424415574Silentrs780717857L1275L0.58
SKCMchr1424415408Missense_MutationNAS1220F0.49
SKCMchr1424415526SilentNAS1259S0.64
SKCMchr1424415592SilentnovelE1281E0.37
SKCMchr1424415901SilentNAL1384L0.35
SKCMchr1424407872Missense_MutationNAY68N0.21
SKCMchr1424414944SilentnovelL1065L0.39
SKCMchr1424414945Missense_MutationnovelG1066S0.39
SKCMchr1424416568Missense_MutationnovelP1607S0.28
SKCMchr1424408087SilentnovelG139G0.2
SKCMchr1424408428Missense_MutationNAR253K0.42
SKCMchr1424410012Nonsense_MutationNAQ740*0.13
SKCMchr1424415560Missense_MutationnovelE1271K0.27
STADchr1424409988Missense_Mutationrs376464969A732P0.55
STADchr1424410041Frame_Shift_DelnovelA751Pfs*150.15
STADchr1424409100Frame_Shift_DelnovelL438Wfs*310.3
STADchr1424408009Frame_Shift_DelNAP115Lfs*40.4
STADchr1424411117Missense_Mutationrs772745095M819T0.31RNase_Zc3h12a
STADchr1424415230Missense_Mutationrs777661158R1161C0.35
STADchr1424399344Missense_Mutationrs781624995R33H0.42
STADchr1424407985SilentnovelS105S0.35
STADchr1424411140SilentnovelR827R0.43
STADchr1424416357SilentnovelV1536V0.44
STADchr1424415469SilentNAA1240A0.33
STADchr1424415757Frame_Shift_DelNAP1338Lfs*1020.32
STADchr1424413388Silentrs373134545T939T0.5
STADchr1424417257Silentrs754932341S1836S0.18
STADchr1424408009Frame_Shift_DelNAP115Lfs*40.11
STADchr1424408009Frame_Shift_DelNAP115Lfs*40.21
STADchr1424416427Missense_Mutationrs778733327E1560K0.58
STADchr1424416388Missense_MutationNAS1547P0.21
STADchr1424408950Missense_MutationNAA386T0.3
STADchr1424416039SilentnovelT1430T0.08
STADchr1424415483Missense_Mutationrs368016452R1245Q0.42
STADchr1424415647Missense_MutationNAP1300S0.11
STADchr1424408009Frame_Shift_DelNAP115Lfs*40.33
STADchr1424415839Missense_Mutationrs775248149R1364C0.32
STADchr1424415310SilentNAA1187A0.23
STADchr1424410076Missense_Mutationrs752963794A761V0.27
STADchr1424417264Missense_MutationnovelR1839G0.53
TGCTchr1424411150Missense_Mutationrs540767530R830Q0.19RNase_Zc3h12a
TGCTchr1424408853Silentrs776592865G353G0.17
THCAchr1424408244Silentrs766168636L192L0.32
THCAchr1424417062SilentnovelP1771P0.54
UCECchr1424416332Missense_MutationnovelD1528V0.19
UCECchr1424411369Missense_Mutationrs762799957T854M0.45RNase_Zc3h12a
UCECchr1424416891Silentrs370103462T1714T0.33
UCECchr1424408279Silentrs749825121I203I0.27
UCECchr1424409661Missense_MutationNAK623E0.26
UCECchr1424410064Missense_Mutationrs201382639R757H0.27
UCECchr1424414701SilentNAE984E0.28
UCECchr1424409216Silentrs746482703S474S0.32
UCECchr1424415627Missense_MutationnovelR1293H0.11
UCECchr14244181023'UTRnovel0.31
UCECchr1424408261Silentrs367849321A197A0.27
UCECchr1424411392Missense_MutationnovelL862F0.11RNase_Zc3h12a
UCECchr1424399264SilentnovelG6G0.4
UCECchr1424415914Missense_MutationnovelL1389M0.32
UCECchr1424416332Missense_MutationnovelD1528V0.3
UCECchr1424414801Missense_MutationnovelD1018N0.51
UCECchr1424417111Missense_Mutationrs764202374V1788I0.42
UCECchr1424409147Missense_MutationnovelE451D0.26
UCECchr1424414710SilentnovelP987P0.21
UCECchr14244182173'UTRnovel0.3
UCECchr1424408118Frame_Shift_DelnovelT150Pfs*100.36
UCECchr1424411370SilentNAT854T0.29
UCECchr1424409203Missense_Mutationrs745524157D470G0.16
UCECchr1424410064Missense_Mutationrs201382639R757H0.28
UCECchr1424414836SilentNAV1029V0.12
UCECchr1424415303Missense_MutationnovelP1185H0.28
UCECchr1424415671Missense_Mutationrs768878706V1308I0.36
UCECchr1424409412Missense_MutationnovelV540L0.37
UCECchr1424414980Missense_MutationnovelQ1077H0.23
UCECchr1424416582Silentrs774720411T1611T0.11
UCECchr1424407944Missense_MutationNAL92I0.59
UCECchr1424408875Missense_MutationnovelP361S0.15
UCECchr1424411382Silentrs376923106S858S0.46
UCECchr1424408733Silentrs776506480T313T0.3
UCECchr1424415962Missense_MutationnovelL1405F0.49
UCECchr1424416606Missense_MutationNAI1619M0.34
UCECchr1424411440Missense_MutationnovelY878H0.24RNase_Zc3h12a
UCECchr1424417063Silentrs200040524L1772L0.58
UCECchr14244181723'UTRnovel0.3
UCECchr1424415430Silentrs767642326P1227P0.38
UCECchr1424408062Missense_MutationnovelQ131R0.38
UCECchr1424408169Missense_MutationnovelV167F0.43
UCECchr1424408892SilentnovelA366A0.33
UCECchr1424411357Missense_MutationnovelS850N0.45RNase_Zc3h12a
UCECchr1424415267Missense_MutationnovelA1173V0.36
UCECchr1424409514Nonsense_Mutationrs759130124R574*0.38
UCECchr1424415176Nonsense_MutationnovelR1143*0.56
UCECchr1424415715Missense_MutationnovelE1322D0.44
UCECchr1424408974Nonsense_MutationnovelQ394*0.37
UCECchr1424414803SilentNAD1018D0.4
UCECchr1424416316Missense_Mutationrs750601148L1523F0.12
UCECchr1424399365Missense_MutationnovelN40S0.35
UCECchr1424408119Frame_Shift_DelnovelR152Gfs*80.32
UCECchr1424409854Missense_Mutationrs554700851P687L0.31
UCECchr1424409515Missense_Mutationrs767253660R574Q0.33
UCECchr1424408250Missense_Mutationrs751312331R194W0.38
UCECchr1424416083Missense_MutationnovelA1445V0.33
UCECchr14244174933'UTRnovel0.5
UCECchr14244182913'UTRrs5276758780.28
UCECchr1424415690Missense_MutationNAG1314D0.39
UCECchr1424415757Frame_Shift_DelNAP1338Lfs*1020.23
UCECchr1424415748SilentNAS1333S0.39
UCECchr1424399417SilentnovelG57G0.38
UCECchr1424415026Missense_Mutationrs777933278A1093T0.33
UCECchr14244174473'UTRnovel0.26
UCECchr1424409553Missense_Mutationrs368022553E587K0.55
UCECchr1424409988Missense_MutationnovelA732T0.39
UCECchr14244182203'UTRnovel0.5
UCECchr1424408125Missense_MutationnovelR152P0.2
UCECchr1424416035Missense_MutationNAR1429Q0.28
UCECchr1424417097Missense_MutationnovelG1783V0.13
UCECchr14244175463'UTRnovel0.39
UCECchr1424408764Nonsense_MutationNAQ324*0.27
UCECchr1424414988Missense_MutationNAA1080V0.36
UCECchr1424409364Missense_Mutationrs373058068V524M0.38
UCECchr1424413330Missense_MutationnovelT920I0.3RNase_Zc3h12a
UCECchr1424411119Missense_MutationNAA820T0.47RNase_Zc3h12a
UCECchr1424416449Missense_Mutationrs769142864R1567H0.28
UCECchr1424415592Missense_MutationNAE1281D0.44
UCECchr1424415727SilentNAG1326G0.23
UCECchr1424411190Missense_MutationnovelK843N0.46RNase_Zc3h12a
UCECchr1424408293Missense_Mutationrs746196710R208H0.45
UCECchr1424413372Missense_MutationnovelG934D0.29RNase_Zc3h12a
UCECchr1424415840Missense_Mutationrs760361213R1364H0.23
UCECchr1424416267Silentrs748051233P1506P0.2
UCECchr1424416592Missense_MutationnovelS1615P0.13
UCECchr14244175033'UTRnovel0.28
UCECchr1424416362Missense_MutationNAT1538M0.17
UCECchr1424415362Frame_Shift_DelNAG1206Vfs*500.32
UCECchr1424417425SilentnovelS1892S0.43
UCECchr1424410064Missense_Mutationrs201382639R757H0.31
UCECchr1424416676Missense_MutationnovelT1643A0.3
UCECchr14244180013'UTRnovel0.29
UCSchr1424414820Missense_MutationnovelA1024V0.47
UCSchr1424416719Missense_Mutationrs201409522T1657M0.49

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.15560.19769
CHOLDEL0.36110.00040262
HNSCDEL0.12260.0025503
KIRPDEL0.16670.085174
LUSCDEL0.26750.0082553
PAADDEL0.07070.11332

Survival Analysis
CancerP-value Q-value
KIRC0.0006

Kaplan-Meier Survival Analysis

STAD0.02

Kaplan-Meier Survival Analysis

HNSC0.0098

Kaplan-Meier Survival Analysis

SKCM0.00025

Kaplan-Meier Survival Analysis

LAML0.018

Kaplan-Meier Survival Analysis

UCEC0.017

Kaplan-Meier Survival Analysis

UVM0.00017

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000205978 (Gene tree)
Gene ID
57523
Gene Symbol
NYNRIN
Alias
FLJ11811|CGIN1|KIAA1305
Full Name
NYN domain and retroviral integrase containing
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
20,503 bases
Position
chr14:24,398,786-24,419,288
Accession
20165
RBP type
canonical RBP
Summary
(NYN Domain And Retroviral Integrase Containing) is a Protein Coding gene. Diseases associated with NYNRIN include Endocervical Carcinoma. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and RNA binding. An important paralog of this gene is KHNYN.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000371994RNase_Zc3h12aPF11977.81e-5011
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000382554NYNRIN-2017857-ENSP000003719941898 (aa)-Q9P2P1
ENST00000554505NYNRIN-202425--- (aa)--
Gene Model
Click here to download ENSG00000205978's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000205978Cholesterol, LDL4E-1120686565
ENSG00000205978Cholesterol, LDL2E-825961943
ENSG00000205978Cholesterol, LDL3E-1524097068
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000205978rs80173771424414681ALDL cholesterol24097068[NR] unit increase0.03EFO_0004611
ENSG00000205978rs116217921424402720TLDL cholesterol25961943[0.023-0.051] s.d. increase0.037EFO_0004611
ENSG00000205978rs80173771424414681TLDL cholesterol20686565[0.8-1.54] mg/dL increase1.17EFO_0004611
ENSG00000205978rs80173771424414681ALDL cholesterol levels28334899[0.023-0.038] unit increase (EA Beta value)0.0303EFO_0004611
ENSG00000205978rs116217921424402720CLow density lipoprotein cholesterol levels29507422unit decrease0.033EFO_0004611
ENSG00000205978rs116217921424402720CLow density lipoprotein cholesterol levels29507422unit decrease0.033EFO_0004611
ENSG00000205978rs23323281424413852CLow density lipoprotein cholesterol levels29507422unit decrease0.036EFO_0004611
ENSG00000205978rs23323281424413852CLow density lipoprotein cholesterol levels29507422unit decrease0.035EFO_0004611
ENSG00000205978rs80173771424414681GLow density lipoprotein cholesterol levels29507422unit decrease0.036EFO_0004611
ENSG00000205978rs80173771424414681GLow density lipoprotein cholesterol levels29507422unit decrease0.035EFO_0004611
ENSG00000205978rs116217921424402720CTotal cholesterol levels29507422unit decrease0.03EFO_0004574
ENSG00000205978rs116217921424402720CTotal cholesterol levels29507422unit decrease0.031EFO_0004574
ENSG00000205978rs23323281424413852CTotal cholesterol levels29507422unit decrease0.031EFO_0004574
ENSG00000205978rs23323281424413852CTotal cholesterol levels29507422unit decrease0.031EFO_0004574
ENSG00000205978rs80173771424414681GTotal cholesterol levels29507422unit decrease0.031EFO_0004574
ENSG00000205978rs80173771424414681GTotal cholesterol levels29507422unit decrease0.031EFO_0004574
ENSG00000205978rs65737781424403003TLDL cholesterol x physical activity interaction (2df test)30670697EFO_0004611|EFO_0003940
ENSG00000205978rs71603161424401845?Breast cancer specific mortality in estrogen receptor positive breast cancer30787463[0.50-0.75]0.61414945EFO_1000649|EFO_0004352
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000205978's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000205978NYNRIN10084.257ENSAMEG00000015934NYNRIN10084.310Ailuropoda_melanoleuca
ENSG00000205978NYNRIN10093.911ENSANAG00000036690NYNRIN10093.911Aotus_nancymaae
ENSG00000205978NYNRIN10082.730ENSBTAG00000007149NYNRIN10083.045Bos_taurus
ENSG00000205978NYNRIN10095.785ENSCJAG00000006385NYNRIN10095.785Callithrix_jacchus
ENSG00000205978NYNRIN10085.774ENSCAFG00000012390NYNRIN10085.722Canis_familiaris
ENSG00000205978NYNRIN10083.994ENSCAFG00020024302NYNRIN10084.463Canis_lupus_dingo
ENSG00000205978NYNRIN10081.618ENSCHIG00000017197NYNRIN10082.143Capra_hircus
ENSG00000205978NYNRIN10088.462ENSTSYG00000036783NYNRIN10088.409Carlito_syrichta
ENSG00000205978NYNRIN10082.838ENSCPOG00000014420NYNRIN10082.787Cavia_porcellus
ENSG00000205978NYNRIN10095.798ENSCCAG00000032076NYNRIN10095.746Cebus_capucinus
ENSG00000205978NYNRIN10095.577ENSCATG00000034653NYNRIN10095.577Cercocebus_atys
ENSG00000205978NYNRIN10084.081ENSCLAG00000009622NYNRIN10084.029Chinchilla_lanigera
ENSG00000205978NYNRIN10097.682ENSCSAG00000015855NYNRIN10097.682Chlorocebus_sabaeus
ENSG00000205978NYNRIN10097.418ENSCANG00000033188NYNRIN10097.418Colobus_angolensis_palliatus
ENSG00000205978NYNRIN9976.483ENSCGRG00001008471Nynrin9976.931Cricetulus_griseus_chok1gshd
ENSG00000205978NYNRIN9976.483ENSCGRG00000014985Nynrin9976.931Cricetulus_griseus_crigri
ENSG00000205978NYNRIN10080.733ENSDNOG00000049474NYNRIN10080.733Dasypus_novemcinctus
ENSG00000205978NYNRIN10085.825ENSEASG00005012250NYNRIN10086.350Equus_asinus_asinus
ENSG00000205978NYNRIN10085.913ENSECAG00000016595NYNRIN10086.436Equus_caballus
ENSG00000205978NYNRIN10087.434ENSFCAG00000022114NYNRIN10087.007Felis_catus
ENSG00000205978NYNRIN9494.958ENSFDAG00000013425NYNRIN10094.958Fukomys_damarensis
ENSG00000205978NYNRIN10099.210ENSGGOG00000016176NYNRIN10099.210Gorilla_gorilla
ENSG00000205978NYNRIN9884.787ENSHGLG00000002148NYNRIN9984.947Heterocephalus_glaber_female
ENSG00000205978NYNRIN9684.573ENSHGLG00100010082NYNRIN10084.628Heterocephalus_glaber_male
ENSG00000205978NYNRIN10086.660ENSSTOG00000024004NYNRIN10086.660Ictidomys_tridecemlineatus
ENSG00000205978NYNRIN10080.674ENSJJAG00000022144Nynrin10080.305Jaculus_jaculus
ENSG00000205978NYNRIN10085.759ENSLAFG00000014582NYNRIN10085.550Loxodonta_africana
ENSG00000205978NYNRIN10097.418ENSMFAG00000042133NYNRIN10097.418Macaca_fascicularis
ENSG00000205978NYNRIN10097.313ENSMMUG00000009513NYNRIN10097.313Macaca_mulatta
ENSG00000205978NYNRIN10097.313ENSMNEG00000032900NYNRIN10097.313Macaca_nemestrina
ENSG00000205978NYNRIN10097.524ENSMLEG00000043583NYNRIN10097.524Mandrillus_leucophaeus
ENSG00000205978NYNRIN9974.855ENSMAUG00000008402Nynrin9974.698Mesocricetus_auratus
ENSG00000205978NYNRIN10085.333ENSMICG00000031725NYNRIN10084.652Microcebus_murinus
ENSG00000205978NYNRIN10074.092ENSMOCG00000008482Nynrin10074.092Microtus_ochrogaster
ENSG00000205978NYNRIN7555.401ENSMODG00000002972-8255.201Monodelphis_domestica
ENSG00000205978NYNRIN9975.000MGP_CAROLIEiJ_G0019322Nynrin9975.420Mus_caroli
ENSG00000205978NYNRIN9975.342ENSMUSG00000075592Nynrin9975.553Mus_musculus
ENSG00000205978NYNRIN9975.276MGP_PahariEiJ_G0030339Nynrin9975.066Mus_pahari
ENSG00000205978NYNRIN9975.158MGP_SPRETEiJ_G0020211Nynrin9975.578Mus_spretus
ENSG00000205978NYNRIN10085.055ENSMPUG00000005656NYNRIN10084.688Mustela_putorius_furo
ENSG00000205978NYNRIN10081.437ENSMLUG00000011291NYNRIN10081.542Myotis_lucifugus
ENSG00000205978NYNRIN10080.787ENSNGAG00000013937Nynrin10080.525Nannospalax_galili
ENSG00000205978NYNRIN10097.841ENSNLEG00000015511NYNRIN10097.841Nomascus_leucogenys
ENSG00000205978NYNRIN10082.684ENSODEG00000001595NYNRIN10082.684Octodon_degus
ENSG00000205978NYNRIN10082.755ENSOCUG00000015163NYNRIN10082.755Oryctolagus_cuniculus
ENSG00000205978NYNRIN10087.710ENSOGAG00000024360NYNRIN10088.550Otolemur_garnettii
ENSG00000205978NYNRIN10080.701ENSOARG00000019074NYNRIN10081.276Ovis_aries
ENSG00000205978NYNRIN10099.368ENSPPAG00000028719NYNRIN10099.368Pan_paniscus
ENSG00000205978NYNRIN10087.382ENSPPRG00000004961NYNRIN10086.954Panthera_pardus
ENSG00000205978NYNRIN9987.114ENSPTIG00000016800NYNRIN9986.681Panthera_tigris_altaica
ENSG00000205978NYNRIN10099.262ENSPTRG00000006219NYNRIN10099.262Pan_troglodytes
ENSG00000205978NYNRIN10097.102ENSPANG00000018562NYNRIN10097.102Papio_anubis
ENSG00000205978NYNRIN9973.762ENSPEMG00000018953Nynrin10074.619Peromyscus_maniculatus_bairdii
ENSG00000205978NYNRIN10098.736ENSPPYG00000005705NYNRIN10098.736Pongo_abelii
ENSG00000205978NYNRIN10086.796ENSPCOG00000027737NYNRIN10086.639Propithecus_coquereli
ENSG00000205978NYNRIN10075.669ENSRNOG00000048431Nynrin10076.193Rattus_norvegicus
ENSG00000205978NYNRIN10097.471ENSRBIG00000030244NYNRIN10097.471Rhinopithecus_bieti
ENSG00000205978NYNRIN10097.418ENSRROG00000037811NYNRIN10097.418Rhinopithecus_roxellana
ENSG00000205978NYNRIN10095.089ENSSBOG00000023644NYNRIN10095.089Saimiri_boliviensis_boliviensis
ENSG00000205978NYNRIN8855.029ENSSHAG00000007338-9754.947Sarcophilus_harrisii
ENSG00000205978NYNRIN8584.677ENSSSCG00000032473NYNRIN10084.738Sus_scrofa
ENSG00000205978NYNRIN10085.212ENSUAMG00000007019NYNRIN10085.265Ursus_americanus
ENSG00000205978NYNRIN9880.021ENSUMAG00000022954NYNRIN9980.075Ursus_maritimus
ENSG00000205978NYNRIN9791.159ENSVVUG00000029210NYNRIN10091.159Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0005575cellular_component-NDComponent
GO:0008150biological_process-NDProcess
GO:0015074DNA integration-IEAProcess
GO:0016021integral component of membrane-IEAComponent
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