EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
25985019Common Oncogene Mutations and Novel SND1-BRAF Transcript Fusion in Lung Adenocarcinoma from Never Smokers.Sci Rep2015 May 18Jang JSdoi: 10.1038/srep09755.
26997225Staphylococcal Nuclease and Tudor Domain Containing 1 (SND1 Protein) Promotes Hepatocarcinogenesis by Inhibiting Monoglyceride Lipase (MGLL).J Biol Chem2016 May 13Rajasekaran Ddoi: 10.1074/jbc.M116.715359
25965817MiR-361-5p inhibits colorectal and gastric cancer growth and metastasis by targeting staphylococcal nuclease domain containing-1.Oncotarget2015 Jul 10Ma F-
22396537Multifunction protein staphylococcal nuclease domain containing 1 (SND1) promotes tumor angiogenesis in human hepatocellular carcinoma through novel pathway that involves nuclear factor ??B and miR-221.J Biol Chem2012 Apr 20Santhekadur PKdoi: 10.1074/jbc.M111.321646
28428278Oncogenic Role of SND1 in Development and Progression of Hepatocellular Carcinoma.Cancer Res2017 Jun 15Jariwala Ndoi: 10.1158/0008-5472.CAN-17-0298
17909068SND1, a component of RNA-induced silencing complex, is up-regulated in human colon cancers and implicated in early stage colon carcinogenesis.Cancer Res2007 Oct 1Tsuchiya N-
19435788Staphylococcal nuclease domain-containing protein 1 as a potential tissue marker for prostate cancer.Am J Pathol2009 JunKuruma Hdoi: 10.2353/ajpath.2009.080776
23995791The transcriptional co-activator SND1 is a novel regulator of alternative splicing in prostate cancer cells.Oncogene2014 Jul 17Cappellari Mdoi: 10.1038/onc.2013.360
24155205MicroRNA-127 is downregulated by Tudor-SN protein and contributes to metastasis and proliferation in breast cancer cell line MDA-MB-231.Anat Rec (Hoboken)2013 DecZhao Xdoi: 10.1002/ar.22823
23065261Prognostic impact of Metadherin-SND1 interaction in colon cancer.Mol Biol Rep2012 DecWang Ndoi: 10.1007/s11033-012-1933-0
25405367Role of the staphylococcal nuclease and tudor domain containing 1 in oncogenesis (review).Int J Oncol2015 FebJariwala Ndoi: 10.3892/ijo.2014.2766

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr71276523685'UTRnovel0.43
ACCchr7127990967Missense_MutationnovelA564S0.31
BLCAchr7127990962Missense_MutationNAR562K0.25
BLCAchr7127701300Nonsense_MutationNAS189*0.07
BLCAchr7127887955Missense_MutationnovelR466L0.05
BLCAchr71280921423'UTRnovel0.1
BLCAchr7128089624Missense_MutationNAG852W0.07TUDOR
BLCAchr7128081363Missense_MutationnovelW658R0.39
BLCAchr7128074678SilentNAQ652Q0.13
BLCAchr7128092020Nonsense_MutationnovelR899*0.31
BLCAchr7127904746Splice_SiteNAX485_splice0.17
BLCAchr7127703306Frame_Shift_InsnovelG275Vfs*610.3
BLCAchr7127929224Nonsense_MutationnovelQ522*0.31
BLCAchr7127704941Missense_MutationNAE315Q0.1
BLCAchr7127998098Intronnovel0.06
BLCAchr7127997700Intronnovel0.18
BRCAchr7127703312Missense_MutationnovelI277V0.06
BRCAchr7128084762Missense_MutationNAD717Y0.33
BRCAchr7128091875Silentrs767963514S887S0.47
BRCAchr7128091876Missense_MutationnovelA888S0.09TUDOR
BRCAchr7128081907Intronnovel0.08
BRCAchr7127703231Frame_Shift_DelNAF251Sfs*390.44
CESCchr7127686646Missense_MutationNAQ38E0.35
CESCchr71280921373'UTRnovel0.33
CESCchr7128085729SilentnovelE751E0.33
CESCchr7127997839Intronrs7528345110.37
CESCchr7128085774Silentrs747235161Y766Y0.25
CESCchr7128081451Missense_MutationnovelV687G0.48
CESCchr7127807495Missense_MutationNAK388N0.36
CESCchr7127998098Intronnovel0.5
CESCchr7127686646Missense_MutationNAQ38E0.23
CESCchr7127703318Missense_MutationNAH279Y0.35
CHOLchr7128084724Missense_MutationnovelG704D0.33
COADchr7127704854Nonsense_MutationNAE286*0.46
COADchr7128081885IntronNA0.38
COADchr7128091963Splice_SitenovelX890_splice0.3
COADchr7127929276Missense_Mutationrs143989011R539H0.11
COADchr7127807503Missense_Mutationrs771628442R391H0.25
COADchr7128074624SilentnovelA634A0.19
COADchr7128086960Missense_Mutationrs139075193R776H0.38
COADchr7128092003Nonsense_MutationnovelW893*0.41TUDOR
COADchr7127694863Missense_MutationnovelK88N0.09
COADchr7128084721Splice_Regionnovel0.34
COADchr7127703230Missense_MutationnovelK249N0.23
COADchr7127929195Frame_Shift_DelNAA514Qfs*1560.37
COADchr7128084805Missense_Mutationrs552426263R731H0.24
COADchr7127702490SilentNAD215D0.22
COADchr7128081423Nonsense_MutationnovelR678*0.05
COADchr7127844334Missense_Mutationrs200994299T418M0.12
COADchr7127929237Missense_MutationNAR526H0.23
COADchr71280921773'UTRnovel0.63
COADchr7128089669Missense_MutationnovelK867E0.15TUDOR
COADchr7127844335Silentrs751946216T418T0.16
COADchr7127997787Intronnovel0.07
COADchr7128074659Missense_MutationNAA646V0.29
COADchr7127887899Splice_Regionnovel0.22
COADchr7127997673Intronnovel0.26
COADchr7127703180Missense_MutationNAR233W0.31
COADchr7128081956Intronnovel0.05
COADchr7128085715Missense_Mutationrs369890577R747C0.23
ESCAchr7127997812Intronnovel0.43
ESCAchr7128074537SilentnovelG605G0.52
ESCAchr7128089507Missense_MutationnovelA813T0.18
GBMchr7127703232Missense_MutationnovelF250S0.06
GBMchr71280921153'UTRrs3681247810.26
GBMchr7127702442Silentrs765228444I199I0.19
GBMchr7127997725Intronrs1466750530.27
GBMchr7127844417Missense_MutationnovelG446R0.29
GBMchr71280920683'UTRrs7772297080.27
GBMchr7127694893Frame_Shift_InsnovelI99Nfs*440.09
HNSCchr7127929319SilentnovelF553F0.33
HNSCchr7127997857Intronnovel0.21
KICHchr7127652401Frame_Shift_DelnovelS10Pfs*810.05
KICHchr7127652403In_Frame_DelnovelS11_G13del0.04
KIRCchr7128081925IntronNA0.16
KIRCchr7127701247SilentNAH171H0.12
KIRPchr7127997791Intronnovel0.31
KIRPchr7128085713Missense_MutationnovelY746C0.12
LAMLchr71280920713'UTRnovel0.38
LGGchr7127990971Missense_MutationNAR565Q0.32
LGGchr7127686747Missense_MutationnovelK71N0.18
LGGchr7127702506Missense_MutationnovelV221F0.08
LGGchr7127929326Missense_MutationnovelA556T0.51
LIHCchr7127698892Missense_MutationNAI123V0.05
LIHCchr7127997950IntronNA0.53
LIHCchr7128089646Missense_MutationNAG859E0.5TUDOR
LIHCchr7128081360Missense_MutationNAV657L0.56
LIHCchr7127707575Missense_MutationnovelR322S0.15
LIHCchr71276523645'UTRnovel0.45
LUADchr7127698898Nonsense_MutationNAE125*0.48
LUADchr7127701232Missense_MutationnovelE166D0.11
LUADchr7127701233Missense_MutationnovelG167W0.11
LUADchr7127702466Frame_Shift_DelnovelV208Sfs*820.22
LUADchr7127997951Intronnovel0.62
LUADchr7128089558Missense_MutationNAV830L0.18
LUADchr7128085781Splice_SiteNAX768_splice0.27
LUADchr7127703255Nonsense_MutationNAQ258*0.32
LUADchr7128087033Missense_MutationnovelF800L0.47
LUADchr7127703178Missense_MutationNAR232L0.22
LUADchr7127702437Missense_MutationNAI198V0.25
LUADchr7128081906Intronnovel0.22
LUADchr7127998174Intronnovel0.33
LUADchr7127888002Missense_MutationNAA482T0.31
LUADchr7127702439Missense_MutationNAI198M0.09
LUADchr7127694932Missense_MutationNAM111I0.2
LUADchr7128089560SilentNAV830V0.25
LUADchr7128091990Splice_SitenovelX890_splice0.08
LUADchr7128089624Missense_MutationNAG852W0.17TUDOR
LUADchr7127998012Intronnovel0.22
LUADchr7128089581Frame_Shift_DelnovelH839Mfs*180.2
LUADchr7128074555SilentnovelL611L0.2
LUSCchr7127686664Missense_MutationnovelP44S0.39
LUSCchr7128084757Missense_MutationnovelR715P0.15
LUSCchr7127904818Missense_MutationnovelG509V0.27
LUSCchr7128085744SilentnovelP756P0.2
LUSCchr7127686641Missense_MutationnovelR36P0.18
LUSCchr7127703214Missense_MutationnovelF244S0.2
LUSCchr7128087036SilentNAI801I0.16
LUSCchr71280921613'UTRnovel0.23
LUSCchr7127887990Missense_MutationNAE478Q0.1
LUSCchr7127997789Intronnovel0.04
LUSCchr7127698885SilentNAG120G0.38
LUSCchr7127929245Missense_MutationNAA529S0.25
LUSCchr7128081495Nonsense_MutationnovelE702*0.14
LUSCchr7127904786SilentNAE498E0.1
LUSCchr7127686757Missense_MutationnovelD75Y0.09
MESOchr7127702433Splice_SitenovelX197_splice0.24
OVchr7128081947Intronnovel0.38
OVchr7127707578SilentNAL323L0.37
OVchr7127844328Missense_Mutationrs554481013N416S0.09
OVchr7128091868Missense_MutationnovelA885D0.41TUDOR
OVchr7127997662Intronnovel0.35
PAADchr7128074579Silentrs138799870S619S0.12
PAADchr7128081902Intronnovel0.13
PAADchr7128086971Missense_Mutationrs775970650L780I0.14
PRADchr7127997812Intronnovel0.16
PRADchr7128074668Missense_MutationNAA649V0.17
PRADchr7127703306Missense_MutationnovelG275C0.18
READchr7127904762SilentnovelG490G0.27
READchr7128089505Missense_MutationnovelD812G0.17
SARCchr7127686703Nonsense_MutationnovelG57*0.2
SARCchr7127807502Missense_MutationNAR391C0.14
SARCchr7127707604Missense_MutationnovelP332H0.38
SARCchr7128081481Missense_MutationnovelY697S0.4
SKCMchr7128074551Missense_MutationnovelW610L0.52
SKCMchr7128074552Nonsense_MutationnovelW610*0.52
SKCMchr71280921943'UTRnovel0.33
SKCMchr71280920683'UTRrs7772297080.24
SKCMchr7127703244Missense_Mutationrs780923933S254L0.32
SKCMchr7128089486Splice_Regionnovel0.23
SKCMchr7127701308Nonsense_MutationNAQ192*0.92
SKCMchr7128089593SilentNAT841T0.23
SKCMchr7128074579Silentrs138799870S619S0.35
SKCMchr7127704862SilentNAL288L0.48
SKCMchr7127703303Missense_MutationNAL274V0.21
SKCMchr7127997791IntronNA0.36
SKCMchr7127929215Missense_MutationNAP519S0.44
SKCMchr7127701162Splice_SiteNAX143_splice0.3
SKCMchr7127703205Missense_MutationNAP241L0.32
SKCMchr7127721374Missense_MutationnovelP376S0.22
SKCMchr7127686699SilentnovelR55R0.28
SKCMchr7128092021Missense_MutationnovelR899Q0.46
SKCMchr7127997762Intronnovel0.2
SKCMchr7127997886Intronnovel0.46
SKCMchr7127997725Intronrs1466750530.51
SKCMchr7128089525Missense_MutationNAR819W0.25
SKCMchr7127998018Intronnovel0.2
SKCMchr7127703205Missense_MutationNAP241L0.36
SKCMchr7128081958Intronnovel0.42
SKCMchr7127704914Missense_Mutationrs748087476R306W0.54
SKCMchr7127844351Missense_MutationNAP424S0.41
STADchr7127929259Silentrs138583964Y533Y0.14
STADchr7128089654Missense_MutationNAM862V0.16TUDOR
STADchr7127698928SilentNAR135R0.41
STADchr7128074547Missense_Mutationrs752279583G609S0.21
STADchr7128084776Frame_Shift_DelNAP723Lfs*20.35
STADchr71280921763'UTRnovel0.19
STADchr7128084799Frame_Shift_DelNAR731Afs*110.21
STADchr7128089575Silentrs201745504A835A0.08
STADchr7127807505Missense_MutationNAP392S0.35
STADchr7128089617Silentrs771438370G849G0.27
STADchr7128092005Missense_MutationNAR894C0.29TUDOR
STADchr7128085759SilentNAV761V0.33
STADchr7127998001IntronNA0.12
STADchr7127686653Missense_Mutationrs773076395R40L0.24
STADchr7127721364Silentrs762720042S372S0.1
STADchr7128091843Missense_MutationNAE877K0.07TUDOR
STADchr7128081456Missense_MutationnovelE689K0.15
STADchr7128089617Silentrs771438370G849G0.46
STADchr7127807502Missense_MutationNAR391C0.22
STADchr7127694918Nonsense_MutationnovelR107*0.07
STADchr7128084776Frame_Shift_DelNAP723Lfs*20.26
STADchr7128081501Missense_Mutationrs148285818G704S0.15
STADchr7127686743Frame_Shift_InsnovelD72Gfs*40.17
STADchr7127721368Nonsense_MutationNAR374*0.08
STADchr7127807551Frame_Shift_InsnovelL410Afs*140.21
STADchr7128085781Splice_SiteNAX768_splice0.16
STADchr7127702501Missense_MutationNAV219A0.27
STADchr7127997751Intronrs7727100210.45
STADchr7127721393Missense_MutationNAN382S0.07
STADchr7127997839Intronrs7528345110.19
STADchr71280920943'UTRrs3680450900.25
STADchr71280921553'UTRnovel0.27
STADchr7128084776Frame_Shift_DelNAP723Lfs*20.24
STADchr7127807501SilentNAL390L0.31
STADchr71280920973'UTRnovel0.08
THCAchr7127703230In_Frame_InsnovelK249_F250insLRKVLNQS0.04
THYMchr7128087028Missense_MutationNAA799T0.33
UCECchr7127997825Intronnovel0.51
UCECchr7127997783Intronnovel0.31
UCECchr7127652386Missense_MutationNAA5T0.35
UCECchr7127704877Silentrs763495501F293F0.32
UCECchr7127844393Missense_MutationnovelR438C0.11
UCECchr7127929227Missense_MutationnovelR523W0.09
UCECchr7127997865Intronnovel0.28
UCECchr71280923293'UTRrs5640766960.33
UCECchr7127707591Missense_MutationnovelD328N0.33
UCECchr7127997680Intronnovel0.09
UCECchr7127990964Nonsense_MutationnovelG563*0.6
UCECchr7127701256SilentNAR174R0.41
UCECchr7127990952Nonsense_MutationNAE559*0.45
UCECchr7127997792Intronnovel0.45
UCECchr7127998149Intronnovel0.23
UCECchr7127694834Missense_MutationnovelA79T0.39
UCECchr7127997673Intronnovel0.41
UCECchr7128087015Silentrs764912119T794T0.34
UCECchr71280921333'UTRnovel0.54
UCECchr7128081895IntronNA0.49
UCECchr7127721348Missense_MutationnovelT367M0.05
UCECchr7127702508SilentNAV221V0.13
UCECchr71280923283'UTRnovel0.61
UCECchr7127704920Missense_Mutationrs199541440A308T0.3
UCECchr7127997649Intronnovel0.17
UCECchr7127997651Intronnovel0.19
UCECchr7127702457Silentrs201003399D204D0.46
UCECchr7128084776Frame_Shift_DelNAP723Lfs*20.41
UCECchr7128089617Silentrs771438370G849G0.26
UCECchr7128089541Missense_MutationNAT824I0.43
UCECchr71280921943'UTRnovel0.62
UCECchr71280920693'UTRrs7464777980.29
UCECchr7127844323Splice_SitenovelX415_splice0.37
UCECchr7127694846Nonsense_Mutationrs781032630R83*0.44
UCECchr7128085710Splice_SitenovelX745_splice0.3
UCECchr7127997725Intronrs1466750530.34
UCECchr7128089557Silentrs372542486N829N0.32
UCECchr7127694840Missense_MutationnovelP81S0.6
UCECchr7127701169SilentnovelE145E0.39
UCECchr7127702443Missense_Mutationrs752379309E200K0.31
UCECchr7127704898Silentrs368925468S300S0.44
UCECchr7128074546SilentnovelI608I0.41
UCECchr7127703279Missense_MutationnovelE266K0.26
UCECchr7128084805Missense_Mutationrs552426263R731H0.31
UCECchr7127844377SilentnovelV432V0.44
UCECchr7128081423Nonsense_MutationnovelR678*0.36
UCECchr7127721369Missense_Mutationrs751143196R374Q0.44
UCECchr7127929211Missense_Mutationrs745974485F517L0.14
UCECchr7127807551Missense_Mutationrs374865628R407Q0.32
UCECchr7127652389Nonsense_MutationnovelQ6*0.28
UCECchr7127698933Missense_MutationnovelR136S0.27
UCECchr7127707601Missense_MutationnovelA331V0.28
UCECchr7128074597Silentrs542659541H625H0.28
UCECchr7127704850Frame_Shift_DelNAT285Sfs*30.39
UCECchr7127694859Missense_MutationnovelR87Q0.4
UCECchr7128084757Missense_Mutationrs375174369R715H0.16
UCECchr7127807501SilentNAL390L0.35
UCECchr7127929259Silentrs138583964Y533Y0.45
UCECchr7127997694Intronrs7625524650.32
UCECchr7127998166Intronnovel0.17
UCECchr7128089552Missense_MutationNAL828F0.05
UCECchr7127704898Silentrs368925468S300S0.37
UCECchr7127997725Intronrs1466750530.32
UCECchr7127807541Missense_MutationnovelE404K0.45
UCECchr7127704920Missense_Mutationrs199541440A308T0.15
UCECchr7128086992Missense_Mutationrs774721142R787W0.5
UCECchr7127694911SilentnovelP104P0.49
UCECchr7128087043Missense_MutationnovelP804S0.42
UCECchr7127991051Nonsense_MutationNAR592*0.07
UCECchr7127698925Missense_MutationnovelT134A0.24
UCECchr7127929316SilentnovelT552T0.14
UCECchr7127997927Intronnovel0.22
UCECchr7128084756Missense_Mutationrs775537505R715C0.26
UCECchr7128089610Missense_MutationnovelS847F0.34
UCECchr71280924453'UTRnovel0.33
UCECchr7127652380Missense_MutationnovelS3P0.39
UCECchr7127929259Silentrs138583964Y533Y0.06
UCECchr7128091875Silentrs767963514S887S0.31
UCECchr7127686673Missense_Mutationrs765335048R47W0.35
UCECchr7127694949Splice_Siters111802167X117_splice0.44
UCECchr7127701165Missense_MutationnovelP144H0.64
UCECchr7127844425Splice_SitenovelX448_splice0.46
UCECchr7127929186Splice_SitenovelX510_splice0.44
UCECchr7127997961Intronnovel0.45
UCECchr7127694892Missense_MutationnovelT98M0.1
UCECchr7127703219Missense_MutationnovelA246T0.07
UCECchr7127929298Missense_MutationnovelK546N0.38
UCECchr7127703264Missense_Mutationrs769312847V261I0.37
UCECchr7127703310Missense_MutationnovelT276N0.41
UCECchr7127707590Missense_MutationNAR327S0.33
UCECchr7128074499Splice_SitenovelX594_splice0.25
UCECchr7128085740Missense_MutationnovelS755Y0.18
UCECchr71280920713'UTRnovel0.17
UCECchr7127694859Missense_MutationnovelR87Q0.88
UCECchr7127698894SilentnovelI123I0.24
UCECchr7127704878Missense_Mutationrs764503974A294T0.37
UCECchr7127887952Missense_MutationNAY465C0.32
UCECchr7127990956Missense_MutationnovelC560Y0.09
UCECchr7128087024SilentNAA797A0.3
UCECchr7128085716Missense_MutationNAR747H0.47
UCECchr7127701280SilentnovelN182N0.24
UCECchr71280925573'UTRnovel0.56
UCECchr7127652438Missense_MutationnovelG22D0.35
UCECchr7127702462Missense_MutationnovelS206N0.31
UCECchr7127703246Nonsense_MutationnovelR255*0.4
UCECchr7127997718Intronrs5664089170.33
UCSchr7128081443SilentNAP684P0.49
UCSchr7128081423Nonsense_MutationnovelR678*0.4
UCSchr7128086945Missense_MutationnovelV771A0.09

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.07780.12261
CESCDEL0.16610.0016147
DLBCDEL0.10420.03486
KIRCAMP0.2860.075418
LAMLDEL0.12573.4101e-05
LGGAMP0.31381.5525e-07
LIHCDEL0.08380.24831
PAADDEL0.07070.049388
TGCTDEL0.05330.11738
THCADEL00.27619
UCECDEL0.09650.0001859
UCSDEL0.30360.10142

Survival Analysis
CancerP-value Q-value
THYM0.024

Kaplan-Meier Survival Analysis

KIRC0.0087

Kaplan-Meier Survival Analysis

SARC0.011

Kaplan-Meier Survival Analysis

MESO0.019

Kaplan-Meier Survival Analysis

UCS0.035

Kaplan-Meier Survival Analysis

KIRP0.019

Kaplan-Meier Survival Analysis

BLCA0.00054

Kaplan-Meier Survival Analysis

KICH0.013

Kaplan-Meier Survival Analysis

UCEC0.00037

Kaplan-Meier Survival Analysis

GBM0.0038

Kaplan-Meier Survival Analysis

LIHC0.0098

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000197157 (Gene tree)
Gene ID
27044
Gene Symbol
SND1
Alias
TDRD11|p100
Full Name
staphylococcal nuclease and tudor domain containing 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
440,491 bases
Position
chr7:127,652,119-128,092,609
Accession
30646
RBP type
canonical RBP
Summary
This gene encodes a transcriptional co-activator that interacts with the acidic domain of Epstein-Barr virus nuclear antigen 2 (EBNA 2), a transcriptional activator that is required for B-lymphocyte transformation. Other transcription factors that interact with this protein are signal transducers and activators of transcription, STATs. This protein is also thought to be essential for normal cell growth. A similar protein in mammals and other organisms is a component of the RNA-induced silencing complex (RISC). [provided by RefSeq, Jul 2016]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000346762TUDORPF00567.241.5e-2611
ENSP00000419327TUDORPF00567.241.4e-0911
ENSP00000346762SNasePF00565.174.7e-6915
ENSP00000346762SNasePF00565.174.7e-6925
ENSP00000346762SNasePF00565.174.7e-6935
ENSP00000346762SNasePF00565.174.7e-6945
ENSP00000346762SNasePF00565.174.7e-6955
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
18453631Structural and functional insights into human Tudor-SN, a key component linking RNA interference and editing.Nucleic Acids Res2008 JunLi CLdoi: 10.1093/nar/gkn236
20484005The RNA binding protein Tudor-SN is essential for stress tolerance and stabilizes levels of stress-responsive mRNAs encoding secreted proteins in Arabidopsis.Plant Cell2010 MayFrei dit Frey Ndoi: 10.1105/tpc.109.070680
28634830The microRNA effector RNA-induced silencing complex in hidradenitis suppurativa: a significant dysregulation within active inflammatory lesions.Arch Dermatol Res2017 SepHessam Sdoi: 10.1007/s00403-017-1752-1
28758359Aggregation of SND1 in Stress Granules is Associated with the Microtubule Cytoskeleton During Heat Shock Stimulus.Anat Rec (Hoboken)2017 DecShao Jdoi: 10.1002/ar.23642
29084903Multifunctional RNA Binding Protein OsTudor-SN in Storage Protein mRNA Transport and Localization.Plant Physiol2017 DecChou HLdoi: 10.1104/pp.17.01388
30642630LincRNA TINCR facilitates excessive proliferation and inflammation in post-burn skin fibroblasts by directly binding with SND1 protein and inducing SND1-mediated TGF-β1 expression.Biochem Biophys Res Commun2019 Feb 19Qin Gdoi: 10.1016/j.bbrc.2019.01.013
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000485871SND1-212597--- (aa)--
ENST00000470723SND1-209568--- (aa)--
ENST00000354725SND1-2013476XM_017011987ENSP00000346762910 (aa)XP_016867476Q7KZF4
ENST00000484767SND1-211460--- (aa)--
ENST00000483503SND1-210603--- (aa)--
ENST00000467238SND1-205716--- (aa)--
ENST00000489417SND1-2141447--- (aa)--
ENST00000463020SND1-203793--- (aa)--
ENST00000468621SND1-207494--- (aa)--
ENST00000492840SND1-216472--- (aa)--
ENST00000461056SND1-202555--- (aa)--
ENST00000492772SND1-215549--- (aa)--
ENST00000468166SND1-206552--- (aa)--
ENST00000470463SND1-208530--- (aa)--
ENST00000465900SND1-204630--- (aa)--
ENST00000486037SND1-213695-ENSP00000419327231 (aa)-H7C597
Gene Model
Click here to download ENSG00000197157's gene model file
Pathways
Pathway IDPathway NameSource
hsa05203Viral carcinogenesisKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000197157Cholesterol, LDL2.75727992015498E-717903299
ENSG00000197157Mental Competency4.6125900698314E-917903295
ENSG00000197157Blood Sedimentation7.201e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation5.617e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation5.732e-005-
ENSG00000197157Blood Pressure5.9449917E-005-
ENSG00000197157Blood Pressure6.5559270E-006-
ENSG00000197157Platelet Function Tests8.7400000E-006-
ENSG00000197157Platelet Function Tests2.9043870E-006-
ENSG00000197157Platelet Function Tests1.5587884E-006-
ENSG00000197157Platelet Function Tests2.9043870E-006-
ENSG00000197157Language Tests5.2029000E-005-
ENSG00000197157Language Tests1.6633000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.7621000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.2052000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.2052000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.7621000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.2724000E-005-
ENSG00000197157Child Development Disorders, Pervasive4.4404000E-005-
ENSG00000197157Child Development Disorders, Pervasive3.1778000E-005-
ENSG00000197157Child Development Disorders, Pervasive2.8447000E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000197157rs779998257127932924AEducational attainment (MTAG)30038396[0.024-0.038] unit increase0.0313EFO_0004784
ENSG00000197157rs37356347128032622GSelf-reported math ability30038396[0.012-0.02] unit increase0.0161EFO_0004875
ENSG00000197157rs1171238837128042066AHighest math class taken30038396[0.022-0.045] unit decrease0.0337EFO_0004875
ENSG00000197157rs37356347128032622ASelf-reported math ability (MTAG)30038396[0.011-0.019] unit decrease0.0151EFO_0004875
ENSG00000197157rs779998257127932924AHighest math class taken (MTAG)30038396[0.029-0.047] unit increase0.0381EFO_0004875
ENSG00000197157rs8061667127669880TFeeling worry29500382unit decrease5.949EFO_0009589
ENSG00000197157rs38080727127955520TFeeling worry29500382unit increase6.332EFO_0009589
ENSG00000197157rs171513777127817955AFeeling worry29500382unit increase5.989EFO_0009589
ENSG00000197157rs779998257127932924ACognitive performance (MTAG)30038396[0.034-0.058] unit increase0.0461EFO_0008354
ENSG00000197157rs732349017127758194AGeneral cognitive ability29844566z-score increase6.336EFO_0004337
ENSG00000197157rs780669607128076840AGeneral cognitive ability29844566z-score increase5.79EFO_0004337
ENSG00000197157rs177183957127738598?Reaction time29844566[0.0046-0.0115] unit decrease0.0080441EFO_0008393
ENSG00000197157rs13622677127961201?Reaction time29844566[0.0057-0.0126] unit increase0.009122EFO_0008393
ENSG00000197157rs47313927128048098AIntelligence29942086z-score decrease7.309EFO_0004337
ENSG00000197157rs38080937127732371AIntelligence29942086z-score decrease6.251EFO_0004337
ENSG00000197157rs37577717127898506TIntelligence29942086z-score decrease5.755EFO_0004337
ENSG00000197157rs125362537127955024CIntelligence29942086z-score increase5.928EFO_0004337
ENSG00000197157rs779998257127932924AEducational attainment (years of education)30038396[0.022-0.037] unit increase0.0294EFO_0004784
ENSG00000197157rs752788397127934343TEducational attainment (years of education)30038396[0.021-0.037] unit increase0.0291EFO_0004784
ENSG00000197157rs795209627128031458AEudaimonic well-being30279531[NR] z score decrease6.015EFO_0007869
ENSG00000197157rs64671457127742211ANumber of sexual partners30643258[0.011-0.02] unit decrease0.015750142EFO_0007877
ENSG00000197157rs132462867127900324?Systolic blood pressure30595370EFO_0006335
ENSG00000197157rs7203007127967421AAdventurousness30643258[0.013-0.025] unit decrease0.019167446EFO_0008579
ENSG00000197157rs38080727127955520TAdventurousness30643258[0.0088-0.0175] unit decrease0.01315797EFO_0008579
ENSG00000197157rs7127077127682560TGeneral risk tolerance (MTAG)30643258[0.008-0.013] unit decrease0.0105EFO_0008579
ENSG00000197157rs7203007127967421AGeneral risk tolerance (MTAG)30643258[0.0091-0.0161] unit decrease0.0126EFO_0008579
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000197157's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000197157SND110083.662ENSAPOG00000017599snd19984.538Acanthochromis_polyacanthus
ENSG00000197157SND110098.575ENSAMEG00000004664SND19498.575Ailuropoda_melanoleuca
ENSG00000197157SND19881.971ENSACIG00000003551snd19981.849Amphilophus_citrinellus
ENSG00000197157SND110083.443ENSAOCG00000014166snd19984.316Amphiprion_ocellaris
ENSG00000197157SND110083.443ENSAPEG00000007067snd19984.316Amphiprion_percula
ENSG00000197157SND19882.793ENSATEG00000018475snd18884.036Anabas_testudineus
ENSG00000197157SND110099.121ENSANAG00000034463SND110099.121Aotus_nancymaae
ENSG00000197157SND19982.967ENSACLG00000022897snd19983.964Astatotilapia_calliptera
ENSG00000197157SND19984.158ENSAMXG00000016318snd19884.744Astyanax_mexicanus
ENSG00000197157SND110098.681ENSBTAG00000010692SND110098.681Bos_taurus
ENSG00000197157SND19358.784WBGene00006626tsn-19847.149Caenorhabditis_elegans
ENSG00000197157SND110098.901ENSCJAG00000017668SND110098.901Callithrix_jacchus
ENSG00000197157SND110099.011ENSCAFG00000001700SND110099.011Canis_familiaris
ENSG00000197157SND110099.011ENSCAFG00020021639SND110099.011Canis_lupus_dingo
ENSG00000197157SND110099.011ENSCHIG00000023390SND110099.011Capra_hircus
ENSG00000197157SND17399.472ENSTSYG00000004979SND19699.472Carlito_syrichta
ENSG00000197157SND19984.556ENSCAPG00000010677SND19884.598Cavia_aperea
ENSG00000197157SND110097.912ENSCPOG00000006251SND110097.912Cavia_porcellus
ENSG00000197157SND110099.231ENSCCAG00000036847SND110099.231Cebus_capucinus
ENSG00000197157SND110099.560ENSCATG00000035214SND110099.560Cercocebus_atys
ENSG00000197157SND110098.022ENSCLAG00000011796SND110098.022Chinchilla_lanigera
ENSG00000197157SND110099.560ENSCSAG00000010182SND110099.560Chlorocebus_sabaeus
ENSG00000197157SND18095.122ENSCHOG00000002218SND18688.235Choloepus_hoffmanni
ENSG00000197157SND110092.088ENSCPBG00000018094SND19893.049Chrysemys_picta_bellii
ENSG00000197157SND19856.921ENSCING00000000524-9856.921Ciona_intestinalis
ENSG00000197157SND19958.086ENSCSAVG00000008807-9958.232Ciona_savignyi
ENSG00000197157SND110099.560ENSCANG00000035119SND110099.560Colobus_angolensis_palliatus
ENSG00000197157SND110097.033ENSCGRG00001022514Snd110097.033Cricetulus_griseus_chok1gshd
ENSG00000197157SND19797.172ENSCGRG00000012277Snd19997.172Cricetulus_griseus_crigri
ENSG00000197157SND19884.340ENSCSEG00000008661snd19884.340Cynoglossus_semilaevis
ENSG00000197157SND110083.882ENSCVAG00000010316snd110083.678Cyprinodon_variegatus
ENSG00000197157SND110084.337ENSDARG00000006766snd19787.410Danio_rerio
ENSG00000197157SND19796.054ENSDNOG00000006795SND110096.054Dasypus_novemcinctus
ENSG00000197157SND110098.571ENSDORG00000000336Snd110098.571Dipodomys_ordii
ENSG00000197157SND110059.603FBgn0035121Tudor-SN9850.486Drosophila_melanogaster
ENSG00000197157SND190100.000ENSETEG00000000375SND192100.000Echinops_telfairi
ENSG00000197157SND16173.759ENSEBUG00000014201-8475.956Eptatretus_burgeri
ENSG00000197157SND110097.408ENSEASG00005008513SND110097.408Equus_asinus_asinus
ENSG00000197157SND110099.011ENSECAG00000011451SND110099.011Equus_caballus
ENSG00000197157SND110097.887ENSEEUG00000014737SND110086.593Erinaceus_europaeus
ENSG00000197157SND19982.127ENSELUG00000001805snd19583.055Esox_lucius
ENSG00000197157SND110099.011ENSFCAG00000008289SND110099.011Felis_catus
ENSG00000197157SND110098.242ENSFDAG00000015881SND110098.242Fukomys_damarensis
ENSG00000197157SND19982.201ENSFHEG00000004093snd19784.750Fundulus_heteroclitus
ENSG00000197157SND16474.859ENSGMOG00000018932snd16474.859Gadus_morhua
ENSG00000197157SND16297.902ENSGALG00000052684-5093.583Gallus_gallus
ENSG00000197157SND110084.101ENSGAFG00000008421snd19985.118Gambusia_affinis
ENSG00000197157SND110053.637ENSGACG00000019793snd19854.093Gasterosteus_aculeatus
ENSG00000197157SND110099.780ENSGGOG00000009614SND110099.780Gorilla_gorilla
ENSG00000197157SND19983.480ENSHBUG00000019135snd19983.964Haplochromis_burtoni
ENSG00000197157SND110097.912ENSHGLG00000003618SND110097.912Heterocephalus_glaber_female
ENSG00000197157SND19997.459ENSHGLG00100012449SND110097.459Heterocephalus_glaber_male
ENSG00000197157SND110082.566ENSHCOG00000005266snd19883.781Hippocampus_comes
ENSG00000197157SND110082.385ENSIPUG00000013279snd19883.408Ictalurus_punctatus
ENSG00000197157SND110098.571ENSSTOG00000002140SND110098.571Ictidomys_tridecemlineatus
ENSG00000197157SND110098.681ENSJJAG00000009561Snd110098.681Jaculus_jaculus
ENSG00000197157SND110083.882ENSKMAG00000016997snd19884.899Kryptolebias_marmoratus
ENSG00000197157SND110084.899ENSLBEG00000013563snd19983.537Labrus_bergylta
ENSG00000197157SND19985.226ENSLOCG00000015537snd19885.226Lepisosteus_oculatus
ENSG00000197157SND110098.242ENSLAFG00000009696SND110098.242Loxodonta_africana
ENSG00000197157SND110099.560ENSMFAG00000038114SND110099.560Macaca_fascicularis
ENSG00000197157SND110099.560ENSMMUG00000015432SND110099.560Macaca_mulatta
ENSG00000197157SND110099.560ENSMNEG00000039808SND110099.661Macaca_nemestrina
ENSG00000197157SND110099.451ENSMLEG00000029040SND110099.548Mandrillus_leucophaeus
ENSG00000197157SND19983.682ENSMAMG00000011739snd19884.375Mastacembelus_armatus
ENSG00000197157SND19982.967ENSMZEG00005005681snd19983.964Maylandia_zebra
ENSG00000197157SND110099.121ENSMICG00000000097SND110099.121Microcebus_murinus
ENSG00000197157SND110097.912ENSMOCG00000005040Snd110097.912Microtus_ochrogaster
ENSG00000197157SND110083.224ENSMMOG00000001795snd19984.093Mola_mola
ENSG00000197157SND19995.652ENSMODG00000015182SND19995.652Monodelphis_domestica
ENSG00000197157SND110083.114ENSMALG00000012071snd19883.929Monopterus_albus
ENSG00000197157SND110097.582MGP_CAROLIEiJ_G0028159Snd110097.582Mus_caroli
ENSG00000197157SND110097.363ENSMUSG00000001424Snd110097.363Mus_musculus
ENSG00000197157SND110097.582MGP_PahariEiJ_G0021917Snd110098.314Mus_pahari
ENSG00000197157SND110097.582MGP_SPRETEiJ_G0029159Snd110097.582Mus_spretus
ENSG00000197157SND110098.352ENSMPUG00000006545SND110098.352Mustela_putorius_furo
ENSG00000197157SND110098.621ENSMLUG00000017130SND19997.207Myotis_lucifugus
ENSG00000197157SND110097.912ENSNGAG00000011186Snd110097.912Nannospalax_galili
ENSG00000197157SND19982.857ENSNBRG00000006681snd19983.853Neolamprologus_brichardi
ENSG00000197157SND110099.670ENSNLEG00000012263SND110099.887Nomascus_leucogenys
ENSG00000197157SND191100.000ENSOPRG00000013405SND191100.000Ochotona_princeps
ENSG00000197157SND110098.242ENSODEG00000011502SND110098.242Octodon_degus
ENSG00000197157SND19982.857ENSONIG00000011481snd19683.853Oreochromis_niloticus
ENSG00000197157SND19894.144ENSOANG00000000817SND19993.534Ornithorhynchus_anatinus
ENSG00000197157SND110097.363ENSOCUG00000001620SND110097.363Oryctolagus_cuniculus
ENSG00000197157SND19883.799ENSORLG00000015201snd19883.799Oryzias_latipes
ENSG00000197157SND19883.911ENSORLG00020013991snd19883.911Oryzias_latipes_hni
ENSG00000197157SND19883.911ENSORLG00015012436snd19883.911Oryzias_latipes_hsok
ENSG00000197157SND110083.004ENSOMEG00000006406snd19884.228Oryzias_melastigma
ENSG00000197157SND110099.013ENSOGAG00000013356SND19499.013Otolemur_garnettii
ENSG00000197157SND110097.297ENSOARG00000002149SND110096.158Ovis_aries
ENSG00000197157SND110099.890ENSPPAG00000042947SND110099.890Pan_paniscus
ENSG00000197157SND110099.011ENSPPRG00000004494SND110099.011Panthera_pardus
ENSG00000197157SND110098.901ENSPTIG00000014214SND110098.901Panthera_tigris_altaica
ENSG00000197157SND110099.890ENSPTRG00000023911SND110099.890Pan_troglodytes
ENSG00000197157SND19799.661ENSPANG00000011997SND19999.661Papio_anubis
ENSG00000197157SND19981.477ENSPKIG00000023494snd19881.798Paramormyrops_kingsleyae
ENSG00000197157SND19282.994ENSPMGG00000003629snd110082.994Periophthalmus_magnuspinnatus
ENSG00000197157SND110097.802ENSPEMG00000010240Snd110097.802Peromyscus_maniculatus_bairdii
ENSG00000197157SND19773.446ENSPMAG00000007915-9973.446Petromyzon_marinus
ENSG00000197157SND110096.154ENSPCIG00000011561SND110096.154Phascolarctos_cinereus
ENSG00000197157SND110083.772ENSPFOG00000001557snd19984.650Poecilia_formosa
ENSG00000197157SND110083.772ENSPLAG00000018459snd19684.650Poecilia_latipinna
ENSG00000197157SND110084.211ENSPMEG00000006803snd19985.095Poecilia_mexicana
ENSG00000197157SND110083.882ENSPREG00000002189snd19984.761Poecilia_reticulata
ENSG00000197157SND19399.504ENSPPYG00000017972SND110099.504Pongo_abelii
ENSG00000197157SND110086.593ENSPCAG00000011305SND19986.511Procavia_capensis
ENSG00000197157SND110099.341ENSPCOG00000026791SND110099.435Propithecus_coquereli
ENSG00000197157SND110096.923ENSPVAG00000013945SND110096.923Pteropus_vampyrus
ENSG00000197157SND19982.967ENSPNYG00000000932snd19983.964Pundamilia_nyererei
ENSG00000197157SND110083.260ENSPNAG00000001206snd19884.222Pygocentrus_nattereri
ENSG00000197157SND19997.247ENSRNOG00000031173Snd19997.247Rattus_norvegicus
ENSG00000197157SND17399.624ENSRBIG00000027782-9399.810Rhinopithecus_bieti
ENSG00000197157SND110099.560ENSRROG00000033020SND110099.560Rhinopithecus_roxellana
ENSG00000197157SND110099.121ENSSBOG00000032461SND110099.121Saimiri_boliviensis_boliviensis
ENSG00000197157SND19892.793ENSSHAG00000015359SND110092.793Sarcophilus_harrisii
ENSG00000197157SND110082.155ENSSFOG00015001103snd19883.241Scleropages_formosus
ENSG00000197157SND19883.781ENSSMAG00000001932snd19383.519Scophthalmus_maximus
ENSG00000197157SND110083.443ENSSDUG00000002699snd19284.316Seriola_dumerili
ENSG00000197157SND110076.206ENSSLDG00000001950snd19876.974Seriola_lalandi_dorsalis
ENSG00000197157SND18696.226ENSSARG00000004877SND19296.226Sorex_araneus
ENSG00000197157SND17387.826ENSSPUG00000017586SND19687.826Sphenodon_punctatus
ENSG00000197157SND17684.602ENSSPAG00000021398snd19686.736Stegastes_partitus
ENSG00000197157SND110098.681ENSSSCG00000016590SND110098.681Sus_scrofa
ENSG00000197157SND19983.040ENSTRUG00000014067snd19883.557Takifugu_rubripes
ENSG00000197157SND110083.114ENSTNIG00000011019snd19587.219Tetraodon_nigroviridis
ENSG00000197157SND19393.042ENSTBEG00000003999SND110093.042Tupaia_belangeri
ENSG00000197157SND110094.066ENSTTRG00000006059SND110094.066Tursiops_truncatus
ENSG00000197157SND19198.669ENSUAMG00000005604-9398.669Ursus_americanus
ENSG00000197157SND17190.130ENSUAMG00000002820-8690.054Ursus_americanus
ENSG00000197157SND110098.791ENSUMAG00000005960SND110098.791Ursus_maritimus
ENSG00000197157SND177100.000ENSVPAG00000008302SND174100.000Vicugna_pacos
ENSG00000197157SND110098.791ENSVVUG00000007226SND110098.791Vulpes_vulpes
ENSG00000197157SND19784.633ENSXETG00000023043snd110085.566Xenopus_tropicalis
ENSG00000197157SND19281.710ENSXCOG00000013629snd19981.710Xiphophorus_couchianus
ENSG00000197157SND110084.101ENSXMAG00000011469snd19984.983Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001649osteoblast differentiation16210410.HDAProcess
GO:0003712transcription coregulator activity7651391.TASFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding18453631.IDAFunction
GO:0004518nuclease activity21873635.IBAFunction
GO:0004519endonuclease activity18453631.IDAFunction
GO:0004521endoribonuclease activity28546213.IDAFunction
GO:0005515protein binding20643132.20937909.24882364.24981741.28546213.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005829cytosol-IDAComponent
GO:0005829cytosol-TASComponent
GO:0006401RNA catabolic process21873635.IBAProcess
GO:0010564regulation of cell cycle process28546213.IMPProcess
GO:0010587miRNA catabolic process28546213.IDAProcess
GO:0016020membrane16210410.HDAComponent
GO:0016032viral process-IEAProcess
GO:0016442RISC complex-IEAComponent
GO:0031047gene silencing by RNA-IEAProcess
GO:0042470melanosome-IEAComponent
GO:0045296cadherin binding25468996.HDAFunction
GO:0070062extracellular exosome20458337.HDAComponent
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic-IEAProcess
GO:0097433dense body-IEAComponent
GO:1903506regulation of nucleic acid-templated transcription-IEAProcess
GO:1905172RISC complex binding28546213.IDAFunction
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