EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
14715875Differential recruitment of coregulator proteins steroid receptor coactivator-1 and silencing mediator for retinoid and thyroid receptors to the estrogen receptor-estrogen response element by beta-estradiol and 4-hydroxytamoxifen in human breast cancer.J Clin Endocrinol Metab2004 JanFleming FJ-
21143702Expression of nuclear receptor corepressors and class I histone deacetylases in astrocytic gliomas.Cancer Sci2011 FebCampos Bdoi: 10.1111/j.1349-7006.2010.01792.x
15319284Expression of SMRTbeta promotes ligand-induced activation of mutated and wild-type retinoid receptors.Blood2004 Dec 15Ct?? S-
24971610The SMRT coregulator enhances growth of estrogen receptor-α-positive breast cancer cells by promotion of cell cycle progression and inhibition of apoptosis.Endocrinology2014 SepBlackmore JKdoi: 10.1210/en.2014-1002
22695118Altered corepressor SMRT expression and recruitment to target genes as a mechanism that change the response to androgens in prostate cancer progression.Biochem Biophys Res Commun2012 Jul 6Godoy ASdoi: 10.1016/j.bbrc.2012.06.005
15802375Cell cycle progression stimulated by tamoxifen-bound estrogen receptor-alpha and promoter-specific effects in breast cancer cells deficient in N-CoR and SMRT.Mol Endocrinol2005 JunKeeton EK-
19223455Inhibition of MAPK-signaling pathway promotes the interaction of the corepressor SMRT with the human androgen receptor and mediates repression of prostate cancer cell growth in the presence of antiandrogens.J Mol Endocrinol2009 MayEisold Mdoi: 10.1677/JME-08-0084
23117886SpliceArray profiling of breast cancer reveals a novel variant of NCOR2/SMRT that is associated with tamoxifen resistance and control of ERα transcriptional activity.Cancer Res2013 Jan 1Zhang Ldoi: 10.1158/0008-5472.CAN-12-2241
18546531[Expression of ER alpha and SMRT in apoptosis of breast cancer cells induced by tamoxifen].Zhejiang Da Xue Xue Bao Yi Xue Ban2008 MayZhao XH-
15300237Altered SMRT levels disrupt vitamin D3 receptor signalling in prostate cancer cells.Oncogene2004 Sep 2Khanim FL-
17902051The prognostic significance of steroid receptor co-regulators in breast cancer: co-repressor NCOR2/SMRT is an independent indicator of poor outcome.Breast Cancer Res Treat2008 AugGreen AR-

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr12124420003Missense_MutationnovelY479C0.48
BLCAchr12124332374Missense_MutationNAK2283N0.07
BLCAchr12124336891Missense_Mutationrs200307018R1993C0.35
BLCAchr12124336962Frame_Shift_DelnovelS1964Lfs*570.6
BLCAchr12124473047Missense_Mutationrs768616938R166W0.21
BLCAchr12124341953Missense_MutationnovelI1686M0.09
BLCAchr12124340147Missense_MutationNAA1849V0.36
BLCAchr12124400519Frame_Shift_DelnovelQ599Sfs*110.44
BLCAchr12124336827Missense_Mutationrs762352790S2014L0.12
BLCAchr12124336859Silentrs377215571H2003H0.1
BLCAchr12124335564Missense_MutationnovelT2062A0.16
BLCAchr12124343157Missense_MutationnovelS1595F0.31
BLCAchr12124362189Nonsense_MutationNAQ1013*0.25
BLCAchr12124483738Nonsense_MutationNAS90*0.25
BLCAchr12124335280Missense_Mutationrs201214871G2089D0.38
BLCAchr12124354149Missense_MutationNAP1213S0.63
BLCAchr12124495208Missense_Mutationrs374998878T15I0.17
BLCAchr12124378281Missense_Mutationrs772228038S708L0.36
BLCAchr12124335123Splice_SitenovelX2130_splice0.04
BLCAchr12124426698Missense_MutationnovelD418H0.41
BRCAchr12124402541SilentNAQ501Q0.49
BRCAchr12124398162Frame_Shift_InsnovelS612Efs*390.24
BRCAchr12124340355Missense_MutationnovelE1809D0.65
BRCAchr12124332325Nonsense_MutationNAE2300*0.18
BRCAchr12124426629Missense_MutationnovelR441W0.12
BRCAchr12124402424Frame_Shift_DelNAN540Kfs*700.2
BRCAchr12124419976Missense_MutationNAR488Q0.18
BRCAchr12124350656Missense_Mutationrs373295499R1259W0.16
BRCAchr12124332407SilentNAL2272L0.29
BRCAchr12124378324Missense_MutationnovelA694T0.07
BRCAchr121243247833'UTRnovel0.1
CESCchr12124336977Missense_Mutationrs774145486S1964C0.4
CESCchr12124327469Missense_MutationNAP2375S0.12
CESCchr121243245463'UTRnovel0.33
CESCchr12124348233Missense_MutationnovelR1309H0.21
CESCchr12124336774Missense_MutationNAE2032Q0.2
CESCchr12124402406Splice_RegionNAL546L0.14
CESCchr121243247833'UTRnovel0.09
CESCchr12124430755SilentnovelL305L0.4
CESCchr12124354879Missense_MutationNAV1148I0.33
CESCchr12124363767Missense_Mutationrs748412865P947L0.21
CESCchr121243249823'UTRrs1848679150.29
CESCchr12124356656Missense_MutationnovelS1076F0.31
CESCchr12124337166Missense_MutationnovelS1901F0.41
CESCchr12124378364SilentnovelR680R0.36
CHOLchr12124354923Missense_MutationnovelL1133R0.18
COADchr12124340362In_Frame_DelNAD1807_R1808del0.29
COADchr12124354839Missense_MutationNAL1161P0.13
COADchr12124372291Silentrs532518067P846P0.21
COADchr12124326219Silentrs766761610R2445R0.35
COADchr12124327440Silentrs375299131D2384D0.35
COADchr12124348235SilentNAK1308K0.36
COADchr12124326194Missense_MutationNAA2454T0.49
COADchr12124344728Missense_MutationnovelV1528A0.13
COADchr12124333259Missense_Mutationrs749006415T2209M0.23
COADchr12124336838Silentrs371641181A2010A0.27
COADchr12124344702Missense_MutationNAR1537W0.62
COADchr12124362138Missense_Mutationrs536539471A1030T0.29
COADchr12124347899Missense_Mutationrs562298385R1333H0.19
COADchr12124356705Frame_Shift_Delrs771862790R1060Vfs*30.23
COADchr12124402424Silentrs765176410N540N0.23
COADchr12124344853Silentrs560814961P1486P0.32
COADchr12124336761Missense_Mutationrs775458405R2036H0.05
COADchr12124326363Silentrs536482449G2397G0.19
COADchr12124473090Frame_Shift_DelNAS152Afs*210.21
COADchr12124473131Missense_MutationNAD138Y0.67
COADchr121243253783'UTRnovel0.89
COADchr12124346710Frame_Shift_DelNAL1405*0.44
COADchr12124372440Missense_MutationnovelT797A0.46
COADchr12124372308Frame_Shift_DelnovelE841Rfs*1230.06
COADchr12124378310Silentrs776612196P698P0.37
COADchr12124362270Frame_Shift_DelNAR986Gfs*770.18
COADchr12124486558Missense_MutationnovelL39R0.29
COADchr12124342053Missense_Mutationrs774193502R1653Q0.13
COADchr12124378369Missense_Mutationrs367654646A679T0.26
COADchr12124457117Frame_Shift_DelNAQ251Rfs*220.24
COADchr12124466207Missense_Mutationrs760665839R224H0.36
COADchr12124327435Missense_Mutationrs552340226R2386Q0.6
COADchr12124372159Silentrs780909563A890A0.43
COADchr12124325435SilentNAC2504C0.56
COADchr12124346741Silentrs771028465T1394T0.28
COADchr12124363682Frame_Shift_DelNAI976Sfs*870.39
COADchr12124347890Missense_MutationNAP1336L0.47
COADchr121243253783'UTRnovel0.27
COADchr12124344934Silentrs370364401Y1459Y0.34
COADchr12124348255Frame_Shift_DelNAH1302Mfs*120.07
COADchr12124362207Missense_MutationNAP1007S0.61
COADchr12124372135Silentrs200016013G898G0.57
COADchr12124419991Missense_MutationNAV483A0.08
COADchr12124350675Silentrs748022862P1252P0.24
COADchr12124430726Missense_MutationNAR315H0.09
COADchr12124346807SilentNAR1372R0.23
COADchr12124363682Frame_Shift_DelNAI976Sfs*870.26
COADchr12124343115Missense_Mutationrs767880178S1609L0.49
COADchr12124363682Frame_Shift_DelNAI976Sfs*870.6
COADchr12124378359Missense_MutationNAK682R0.46
COADchr12124327544Missense_MutationnovelK2350E0.06
COADchr12124495247Missense_Mutationrs200569241S2L0.52
COADchr12124335166Missense_MutationnovelQ2127R0.12
COADchr12124430726Missense_MutationNAR315H0.13
COADchr12124483717Missense_MutationNAK97T0.28
COADchr12124348255Frame_Shift_DelNAH1302Mfs*120.43
COADchr12124363682Frame_Shift_DelNAI976Sfs*870.39
COADchr12124430727Missense_MutationNAR315C0.21
COADchr12124466215Silentrs755095650S221S0.31
COADchr12124344702Missense_MutationNAR1537W0.55
COADchr12124356743Frame_Shift_DelNAP1047Lfs*160.43
COADchr12124340119Silentrs200208502S1858S0.15
COADchr12124363682Frame_Shift_DelNAI976Sfs*870.5
COADchr12124344810Missense_MutationNAR1501C0.41
COADchr12124420037Missense_MutationNAL468I0.18
COADchr12124335529Missense_MutationNAE2073D0.59
COADchr12124346593Missense_Mutationrs766376384R1444W0.23
COADchr12124355442Missense_MutationNAA1124V0.18
COADchr12124355520Missense_Mutationrs375804883R1098H0.31
DLBCchr12124335497Missense_Mutationrs201766557R2084Q0.17
ESCAchr12124378307SilentnovelV699V0.14
ESCAchr12124350656Missense_Mutationrs373295499R1259W0.16
ESCAchr12124342003Missense_Mutationrs772634427I1670V0.5
ESCAchr12124336839Missense_Mutationrs757979246A2010V0.23
ESCAchr12124344757Silentrs551690182S1518S0.39
ESCAchr12124335210Silentrs747314164S2112S0.12
ESCAchr12124343095Missense_MutationnovelR1616W0.36
ESCAchr12124347850Missense_MutationnovelH1349Q0.35
ESCAchr12124333182Missense_MutationnovelR2235G0.17
ESCAchr12124362199Silentrs374201637S1009S0.29
ESCAchr12124335569Missense_MutationnovelS2060I0.6
GBMchr12124420015Missense_MutationnovelK475R0.16
GBMchr12124343095Missense_MutationnovelR1616W0.46
GBMchr12124362135Missense_Mutationrs751853167D1031N0.14
GBMchr12124420032Nonsense_MutationnovelY469*0.89
GBMchr12124334525Nonsense_MutationnovelC2168*0.76
GBMchr12124340119Silentrs200208502S1858S0.22
GBMchr12124340423Missense_MutationnovelK1787Q0.15
GBMchr12124342053Missense_Mutationrs774193502R1653Q0.27
GBMchr12124430649Frame_Shift_DelnovelR341Afs*540.3
HNSCchr12124372501Frame_Shift_DelnovelP770Rfs*190.25
HNSCchr12124398143Missense_MutationnovelE618Q0.29
HNSCchr12124374457Missense_Mutationrs376775457H725R0.67
HNSCchr12124354874Silentrs373530484T1149T0.2
HNSCchr12124335566Missense_MutationnovelL2061P0.22
HNSCchr12124372278SilentnovelL851L0.17
HNSCchr12124426710Missense_MutationnovelG414R0.38
HNSCchr12124372134Missense_MutationnovelG899W0.22
HNSCchr12124372023Missense_Mutationrs147831485R936W0.29
HNSCchr12124372149Missense_MutationnovelE894K0.22
HNSCchr12124333136Missense_MutationnovelE2250G0.19
HNSCchr12124340137SilentnovelS1852S0.57
HNSCchr12124348208SilentnovelR1317R0.36
HNSCchr12124362130Missense_MutationnovelK1032N0.28
HNSCchr12124378320Missense_MutationnovelA695V0.22
HNSCchr12124378303Nonsense_MutationnovelE701*0.2
HNSCchr12124327568Missense_MutationnovelI2342V0.44
HNSCchr12124378281Missense_Mutationrs772228038S708L0.36
HNSCchr12124472976SilentnovelQ189Q0.29
HNSCchr12124348252Missense_MutationnovelE1303K0.16
HNSCchr12124495232Missense_MutationnovelP7L0.14
HNSCchr12124449820Missense_MutationnovelI270M0.36
HNSCchr12124430702Missense_Mutationrs757613317R323Q0.13
HNSCchr12124335218Nonsense_MutationnovelQ2110*0.42
KIRCchr12124374448Missense_MutationNAG728E0.42
KIRCchr12124355438Silentrs756684433I1125I0.29
KIRPchr12124362269Missense_MutationnovelR986L0.46
KIRPchr12124363745SilentNAN954N0.55
LAMLchr12124335498Missense_Mutationrs371813927R2084W0.36
LAMLchr12124385746Missense_MutationnovelM673T0.04
LGGchr12124335242In_Frame_InsnovelP2101_H2102insTR0.11
LGGchr12124340360Missense_Mutationrs375229118R1808W0.36
LGGchr12124342025Silentrs745529747P1662P0.28
LGGchr12124327502Missense_MutationnovelA2364T0.39
LGGchr12124333148Missense_MutationnovelG2246V0.13
LGGchr12124385754SilentnovelK670K0.43
LGGchr12124466185Silentrs761420828Y231Y0.41
LGGchr12124325558SilentNAP2463P0.8
LGGchr12124333136Frame_Shift_InsnovelE2250Gfs*490.3
LIHCchr12124337151Missense_MutationnovelP1906L0.42
LIHCchr12124350722Missense_Mutationrs755508738V1237I0.3
LIHCchr12124350670Missense_MutationnovelR1254H0.26
LIHCchr12124402449Missense_MutationNAE532V0.47
LIHCchr12124344798Missense_MutationNAE1505K0.21
LIHCchr12124346615Silentrs779461576T1436T0.2
LIHCchr12124340407Missense_Mutationrs773108865S1792F0.08
LIHCchr12124354921Missense_MutationnovelH1134Y0.32
LIHCchr12124340325Silentrs780246024T1819T0.28
LIHCchr12124430644Missense_MutationnovelK342N0.51
LIHCchr12124350615Frame_Shift_InsnovelK1273Qfs*90.14
LIHCchr12124337173Splice_SitenovelX1896_splice0.41
LIHCchr12124398154Missense_MutationnovelR614H0.1
LUADchr12124343132SilentNAH1603H0.28
LUADchr12124449835Missense_MutationNAQ265H0.21
LUADchr12124346614Missense_MutationnovelP1437S0.27
LUADchr12124341824Splice_RegionnovelR1729R0.4
LUADchr12124341825Missense_MutationnovelR1729L0.4
LUADchr12124363766Silentrs779125633P947P0.08
LUADchr12124372251Missense_MutationnovelE860K0.09
LUADchr12124372058Missense_MutationnovelD924G0.15
LUADchr12124398171Missense_MutationnovelE608D0.59
LUADchr12124472969Frame_Shift_InsnovelK192*0.1
LUADchr12124327466Missense_Mutationrs773013649A2376T0.12
LUADchr12124473133Splice_SitenovelX138_splice0.29
LUADchr12124378337SilentNAA689A0.18
LUADchr12124363775SilentnovelL944L0.25
LUADchr12124426700Missense_MutationnovelA417V0.09
LUADchr12124398164Missense_MutationnovelE611K0.14
LUADchr12124372538Missense_MutationnovelQ764L0.21
LUADchr12124400653Missense_MutationNAS554L0.22
LUADchr12124341976SilentNAL1679L0.26
LUADchr12124336826SilentnovelS2014S0.39
LUADchr12124378260Missense_MutationNAE715V0.09
LUADchr12124348249Missense_MutationNAT1304S0.17
LUADchr12124336840Missense_Mutationrs751521938A2010P0.17
LUADchr12124327512Silentrs778552469L2360L0.31
LUADchr12124333241Missense_MutationNAG2215V0.62
LUADchr12124355531Silentrs564573781P1094P0.35
LUADchr12124341853SilentNAL1720L0.2
LUADchr12124335260Missense_MutationnovelE2096K0.28
LUADchr12124372371Missense_MutationnovelP820A0.36
LUADchr12124372167Nonsense_MutationNAE888*0.2
LUADchr12124340049Missense_MutationNAG1882C0.41
LUADchr12124356651Missense_MutationnovelA1078S0.18
LUADchr12124340011SilentNAV1894V0.29
LUADchr12124372156SilentnovelL891L0.07
LUADchr12124466182Missense_MutationNAD232E0.05
LUADchr12124334521Missense_MutationnovelV2170F0.29
LUADchr12124372571Missense_MutationNAS753C0.38
LUADchr12124378277SilentnovelG709G0.15
LUSCchr12124354871Missense_MutationNAM1150I0.27
LUSCchr12124354873Missense_MutationNAM1150L0.27
LUSCchr12124344933Missense_MutationnovelD1460N0.44
LUSCchr12124372569Missense_MutationnovelP754T0.12
LUSCchr12124372566Missense_MutationnovelH755D0.1
LUSCchr12124355530Missense_Mutationrs199761768V1095I0.16
LUSCchr12124372092Frame_Shift_DelnovelQ913Rfs*510.14
LUSCchr12124355523Missense_Mutationrs530717643P1097L0.14
LUSCchr12124356686Missense_MutationNAS1066F0.47
LUSCchr12124327487Missense_MutationNAN2369D0.32
LUSCchr12124363726SilentNAL961L0.06
LUSCchr12124495219Silentrs369322766T11T0.27
LUSCchr12124430701SilentnovelR323R0.11
LUSCchr12124495193Missense_Mutationrs757710006P20L0.45
LUSCchr12124483643Missense_MutationNAP122S0.28
LUSCchr12124372022Missense_MutationnovelR936L0.38
LUSCchr12124372356Missense_MutationnovelE825K0.4
LUSCchr12124355516SilentNAP1099P0.33
LUSCchr12124346581Nonsense_MutationnovelE1448*0.25
LUSCchr12124473010Missense_Mutationrs369807577R178H0.22
LUSCchr12124362167Missense_Mutationrs371445558R1020Q0.68
LUSCchr12124430680SilentNAR330R0.17
LUSCchr12124473005Missense_MutationnovelD180N0.19
LUSCchr12124483682SilentnovelR109R0.21
OVchr121244952525'UTRnovel1
OVchr12124400571SilentnovelR581R0.06
OVchr12124372261SilentnovelG856G0.71
OVchr12124378257Missense_MutationnovelE716V0.15
OVchr12124400637Silentrs759827085D559D0.32
OVchr12124350737Missense_MutationnovelG1232R0.27
OVchr12124341901Missense_MutationnovelA1704P0.14
OVchr12124378305Frame_Shift_InsnovelV700Afs*100.12
OVchr12124430761Missense_MutationnovelD303E0.09
OVchr12124327581Missense_MutationNAM2337I0.47
OVchr12124350587Missense_MutationnovelG1282S0.33
OVchr12124350621Nonsense_MutationnovelY1270*0.38
PAADchr12124340639SilentnovelP1767P0.27
PAADchr12124342026Missense_Mutationrs769363112P1662L0.12
PAADchr12124343177Silentrs571877591T1588T0.08
PAADchr12124372084Silentrs546717361S915S0.2
PAADchr12124400599Missense_MutationnovelA572V0.17
PAADchr12124400640Silentrs542671777N558N0.16
PRADchr12124340010Silentrs753066848L1895L0.31
PRADchr12124340390Nonsense_MutationNAR1798*0.26
PRADchr12124473095Frame_Shift_InsnovelP150Sfs*80.3
PRADchr12124327516Missense_Mutationrs199616664P2359L0.07
PRADchr12124372290Missense_MutationnovelA847T0.31
PRADchr12124343068Missense_MutationNAR1625C0.36
PRADchr12124346838Missense_MutationnovelS1362F0.7
PRADchr12124372555Silentrs771509251A758A0.42
READchr12124337136Missense_MutationNAP1911L0.32
READchr12124354112Missense_MutationNAY1225C0.52
READchr12124343009Silentrs760461669D1644D0.48
READchr12124400518Frame_Shift_InsnovelQ599Pfs*130.1
READchr12124348255Frame_Shift_DelNAH1302Mfs*120.35
READchr12124336827Missense_Mutationrs762352790S2014L0.38
SARCchr12124348228Missense_MutationnovelY1311N0.09
SARCchr12124356675Missense_MutationNAP1070S0.48
SARCchr12124344624Missense_MutationnovelR1563W0.68
SARCchr12124341878SilentnovelR1711R0.32
SARCchr12124372421Missense_MutationnovelT803I0.18
SKCMchr12124340307SilentnovelP1825P0.38
SKCMchr12124495173Missense_MutationnovelP27T0.42
SKCMchr12124495174SilentnovelY26Y0.41
SKCMchr12124362150Missense_MutationnovelP1026S0.17
SKCMchr12124334456SilentNAA2191A0.68
SKCMchr12124429677Missense_MutationNAS362F0.25
SKCMchr12124385883Silentrs375563372L627L0.41
SKCMchr12124355505Missense_MutationnovelS1103F0.42
SKCMchr12124356751SilentNAG1044G0.45
SKCMchr12124346633Silentrs371027420R1430R0.3
SKCMchr12124348200Missense_Mutationrs537038342R1320K0.16
SKCMchr12124336998Missense_MutationnovelL1957R0.28
SKCMchr12124340331SilentnovelS1817S0.18
SKCMchr12124355569Missense_MutationNAH1082Y0.46
SKCMchr12124362274SilentNAP984P0.38
SKCMchr12124363769SilentNAT946T0.35
SKCMchr12124372094Missense_MutationNAP912L0.22
SKCMchr12124430659Silentrs374059688F337F0.23
SKCMchr12124372475Missense_MutationNAP785L0.43
SKCMchr12124354915Missense_MutationNAP1136S0.57
SKCMchr12124336827Missense_Mutationrs762352790S2014L0.42
SKCMchr12124335266Missense_Mutationrs763944351G2094S0.25
SKCMchr12124340117Missense_MutationnovelP1859L0.19
SKCMchr12124372371Missense_MutationNAP820S0.39
SKCMchr12124340111Missense_MutationNAS1861F0.19
SKCMchr12124340083SilentNAQ1870Q0.22
SKCMchr12124430658Missense_MutationNAP338S0.34
SKCMchr12124336763SilentNAL2035L0.34
SKCMchr12124340400SilentnovelS1794S0.77
SKCMchr12124340401Missense_MutationNAS1794F0.77
SKCMchr12124333215Missense_MutationnovelP2224S0.35
SKCMchr12124333216SilentnovelS2223S0.38
SKCMchr12124449848Missense_MutationNAS261F0.38
SKCMchr12124346598Missense_MutationNAA1442V0.25
SKCMchr12124346596Missense_MutationNAP1443S0.44
SKCMchr12124341936Missense_MutationNAS1692L0.46
SKCMchr12124483701SilentnovelF102F0.28
SKCMchr12124363691SilentNAA972A0.37
SKCMchr12124341939Missense_MutationNAT1691I0.41
SKCMchr12124426654Missense_MutationNAW432C0.51
SKCMchr12124340308Missense_MutationNAP1825L0.24
SKCMchr12124336877SilentNAK1997K0.12
SKCMchr12124344857Missense_MutationNAP1485L0.57
SKCMchr12124356667SilentNAP1072P0.75
SKCMchr12124495193Missense_Mutationrs757710006P20L0.41
SKCMchr12124495194Missense_MutationnovelP20S0.41
SKCMchr12124336787SilentnovelP2027P0.34
SKCMchr12124466232Missense_MutationnovelP216S0.39
SKCMchr12124344859SilentnovelF1484F1
SKCMchr12124372247Missense_MutationnovelP861L0.51
SKCMchr12124340744SilentNAI1732I0.3
SKCMchr12124363784SilentNAR941R0.11
SKCMchr12124340111Missense_MutationNAS1861F0.38
SKCMchr12124340401Missense_MutationNAS1794F0.33
SKCMchr12124350594SilentNAS1279S0.25
SKCMchr12124363767Missense_Mutationrs748412865P947L0.09
SKCMchr12124363768Missense_MutationnovelP947S0.09
SKCMchr12124385847SilentNAR639R0.28
SKCMchr12124372095Missense_MutationNAP912S0.2
SKCMchr12124430737SilentNAK311K0.39
SKCMchr12124336762Missense_Mutationrs763480105R2036C0.26
SKCMchr12124336763SilentNAL2035L0.25
SKCMchr12124333231SilentNAG2218G0.24
SKCMchr12124426744SilentNAA402A0.18
SKCMchr12124378316SilentnovelF696F0.28
SKCMchr12124402427SilentnovelE539E0.43
STADchr12124340101SilentNAT1864T0.2
STADchr12124362262Silentrs552738969D988D0.64
STADchr12124430624Missense_MutationNAR349H0.29
STADchr12124483594Splice_SiteNAX137_splice0.43
STADchr12124341833Silentrs375290289A1726A0.43
STADchr12124466220Missense_MutationnovelE220K0.27
STADchr12124341998Silentrs201769852R1671R0.17
STADchr12124343081SilentNAG1620G0.13
STADchr12124372218Missense_Mutationrs370196674E871K0.18
STADchr12124363682Frame_Shift_DelNAI976Sfs*870.47
STADchr12124340086SilentNAQ1869Q0.26
STADchr12124486405Intronnovel0.32
STADchr12124400519Frame_Shift_DelnovelQ599Sfs*110.22
STADchr12124342011Missense_MutationNAP1667L0.33
STADchr12124402458Missense_Mutationrs376669119A529E0.36
STADchr12124356746Missense_MutationnovelP1046L0.3
STADchr12124363682Frame_Shift_DelNAI976Sfs*870.41
STADchr12124437982Missense_MutationnovelR277Q0.48
STADchr12124354842Frame_Shift_DelnovelK1160Sfs*80.21
STADchr12124430726Missense_MutationNAR315H0.43
STADchr12124348182Missense_MutationNAS1326N0.11
STADchr12124350606SilentNAG1275G0.07
STADchr12124398172Missense_MutationNAE608A0.08
STADchr12124400517Missense_MutationNAQ599H0.09
STADchr12124385782Missense_MutationNAN661S0.52
STADchr12124372291Frame_Shift_DelnovelA847Rfs*1170.44
STADchr12124336963Missense_Mutationrs747426729A1969T0.15
STADchr12124402503Missense_Mutationrs768882087R514H0.3
STADchr12124348255Frame_Shift_DelNAH1302Mfs*120.35
STADchr12124327594Missense_MutationNAA2333V0.19
STADchr12124340153Missense_Mutationrs753590635R1847H0.32
STADchr12124483687Missense_MutationnovelR107H0.58
STADchr12124430638Silentrs371011372R344R0.25
STADchr12124400635Missense_MutationNAE560G0.11
STADchr12124378309Missense_Mutationrs771023965V699M0.34
STADchr12124362269Frame_Shift_Insrs746871841R986Pfs*760.38
STADchr12124372209Missense_MutationnovelP874A0.14
STADchr12124336841Silentrs757282329P2009P0.5
STADchr12124426782Missense_MutationNAR390C0.28
STADchr12124378379In_Frame_DelnovelK675del0.21
STADchr12124466254Silentrs772776811P208P0.27
STADchr12124333232Missense_MutationnovelG2218D0.17
STADchr12124336894Missense_Mutationrs368518568A1992T0.14
STADchr12124342000Missense_Mutationrs748517349R1671C0.31
STADchr12124348238Frame_Shift_DelnovelK1308Sfs*60.08
STADchr12124356743Frame_Shift_DelNAP1047Lfs*160.42
STADchr12124354883SilentnovelG1146G0.28
STADchr12124378258Missense_MutationNAE716Q0.18
STADchr12124466258Missense_Mutationrs776360455P207L0.41
STADchr12124348178SilentnovelI1327I0.27
STADchr12124372561SilentnovelT756T0.16
STADchr12124466258Missense_Mutationrs776360455P207L0.58
STADchr12124378354Missense_MutationNAK684E0.33
STADchr12124426682Missense_Mutationrs370836867Y423C0.25
STADchr12124372554Missense_Mutationrs747451283A759T0.57
STADchr12124340020Silentrs755595126T1891T0.38
STADchr12124402544Frame_Shift_DelnovelQ500Hfs*1100.36
STADchr12124402546Frame_Shift_DelnovelQ500Afs*220.33
TGCTchr12124340649Missense_Mutationrs777397769A1764V0.14
THCAchr12124402547SilentNAQ499Q0.64
THCAchr12124343013Missense_MutationNAL1643Q0.12
THCAchr12124340137SilentnovelS1852S0.06
UCECchr12124400539Missense_MutationnovelS592N0.23
UCECchr12124356673Silentrs375879296P1070P0.35
UCECchr12124355458Missense_MutationNAE1119K0.45
UCECchr12124483617Silentrs577563958A130A0.44
UCECchr121243252883'UTRrs3709100560.16
UCECchr12124327490Missense_MutationnovelL2368M0.14
UCECchr12124330851Missense_Mutationrs761117621G2318R0.37
UCECchr12124332391Missense_Mutationrs375952313A2278T0.37
UCECchr12124343078SilentnovelV1621V0.21
UCECchr12124354091Splice_SitenovelX1231_splice0.56
UCECchr12124473005Missense_MutationnovelD180N0.38
UCECchr12124332463Missense_MutationNAM2254V0.41
UCECchr12124348255Frame_Shift_DelNAH1302Mfs*120.46
UCECchr12124402544Frame_Shift_DelnovelQ500Hfs*1100.16
UCECchr12124402546Frame_Shift_DelnovelQ500Afs*220.16
UCECchr12124422537Missense_MutationNAK449N0.31
UCECchr12124355466Missense_MutationnovelS1116I0.62
UCECchr12124385888Splice_SitenovelX626_splice0.27
UCECchr12124473009Silentrs757994990R178R0.13
UCECchr121243248523'UTRrs44594100.12
UCECchr12124449813Splice_SitenovelX272_splice0.41
UCECchr12124378283Silentrs773430474A707A0.15
UCECchr12124344798Missense_MutationNAE1505K0.51
UCECchr12124350671Missense_Mutationrs202111746R1254C0.23
UCECchr12124378365Missense_Mutationrs373767918R680Q0.54
UCECchr12124430768Missense_MutationNAR301H0.42
UCECchr12124486444Missense_MutationNAE77A0.29
UCECchr12124343153Silentrs377741543P1596P0.32
UCECchr12124385848Missense_Mutationrs761858151R639Q0.35
UCECchr12124449846Missense_MutationnovelD262N0.31
UCECchr12124332346Missense_MutationnovelT2293A0.44
UCECchr12124426782Missense_MutationNAR390C0.29
UCECchr12124356807Intronnovel0.29
UCECchr12124330880Missense_Mutationrs756901061T2308M0.39
UCECchr12124335483Missense_MutationNAG2089C0.21
UCECchr12124336890Missense_MutationnovelR1993P0.09
UCECchr12124337047Frame_Shift_DelNAR1941Gfs*410.2
UCECchr12124378325Missense_MutationNAE693D0.26
UCECchr12124336761Missense_Mutationrs775458405R2036H0.49
UCECchr12124354140Missense_MutationnovelR1216W0.17
UCECchr12124340149SilentNAP1848P0.23
UCECchr12124342053Missense_Mutationrs774193502R1653Q0.14
UCECchr12124344922Silentrs191598312A1463A0.21
UCECchr12124350661Missense_Mutationrs780940395R1257H0.13
UCECchr12124355522Silentrs368708782P1097P0.3
UCECchr12124356771Missense_Mutationrs531931569E1038K0.15
UCECchr12124372303SilentNAE842E0.28
UCECchr12124385778Silentrs369119404L662L0.22
UCECchr12124483651Missense_MutationNAR119Q0.25
UCECchr12124486431Intronnovel0.32
UCECchr12124363682Frame_Shift_DelNAI976Sfs*870.52
UCECchr12124333258Silentrs779695599T2209T0.16
UCECchr12124335265Missense_MutationnovelG2094D0.5
UCECchr12124325547Missense_Mutationrs200312114R2467Q0.14
UCECchr12124335541Missense_MutationnovelK2069N0.25
UCECchr12124340372Missense_Mutationrs201265970R1804W0.15
UCECchr12124348212Missense_MutationnovelG1316D0.22
UCECchr12124362220Silentrs747598845P1002P0.2
UCECchr12124385862Nonsense_MutationnovelW634*0.29
UCECchr12124344751Frame_Shift_InsnovelS1521Lfs*120.5
UCECchr12124362270Frame_Shift_DelNAR986Gfs*770.58
UCECchr12124342040Frame_Shift_DelnovelN1658Tfs*530.43
UCECchr12124363681Frame_Shift_InsnovelI976Hfs*80.22
UCECchr12124335215Missense_Mutationrs746341430P2111S0.31
UCECchr12124342036Missense_MutationnovelP1659T0.28
UCECchr12124355478Missense_MutationnovelA1112V0.37
UCECchr12124348255Frame_Shift_DelNAH1302Mfs*120.26
UCECchr121243245743'UTRnovel0.32
UCECchr12124340648Silentrs755427580A1764A0.33
UCECchr12124344915Missense_MutationnovelT1466A0.27
UCECchr12124348233Missense_MutationnovelR1309H0.36
UCECchr12124372079Missense_MutationnovelS917F0.53
UCECchr12124378280Silentrs747952180S708S0.41
UCECchr12124429633Missense_MutationnovelD377N0.38
UCECchr12124466207Missense_Mutationrs760665839R224H0.33
UCECchr12124363682Frame_Shift_DelNAI976Sfs*870.43
UCECchr12124402451In_Frame_DelNAK531del0.18
UCECchr12124344924Missense_Mutationrs373008881A1463T0.45
UCECchr121243246483'UTRnovel0.29
UCECchr12124333269Missense_MutationnovelP2206T0.36
UCECchr12124343009Silentrs760461669D1644D0.47
UCECchr12124350629Missense_Mutationrs575622579V1268I0.46
UCECchr12124385852Missense_MutationNAA638T0.58
UCECchr12124398154Missense_MutationnovelR614H0.4
UCECchr12124363682Frame_Shift_DelNAI976Sfs*870.29
UCECchr12124335606Missense_Mutationrs372303606E2048K0.37
UCECchr12124343137Missense_MutationnovelE1602K0.33
UCECchr12124354913Silentrs750952172P1136P0.4
UCECchr12124430681Missense_MutationNAR330H0.56
UCECchr12124430681Missense_MutationNAR330H0.1
UCECchr12124337047Frame_Shift_DelNAR1941Gfs*410.5
UCECchr12124344771Missense_MutationNAT1514A0.36
UCECchr12124325459Silentrs575349014D2496D0.28
UCECchr12124340702Silentrs376629520P1746P0.35
UCECchr12124402503Missense_Mutationrs768882087R514H0.41
UCECchr12124344752Frame_Shift_DelnovelG1520Afs*220.37
UCECchr12124344752Frame_Shift_DelnovelG1520Afs*220.5
UCECchr12124333170Missense_MutationnovelY2239H0.25
UCECchr12124457122Missense_MutationnovelG249V0.35
UCECchr12124344626Missense_MutationnovelT1562M0.26
UCECchr12124348238Frame_Shift_DelnovelK1308Sfs*60.31
UCECchr12124356705Frame_Shift_Delrs771862790R1060Vfs*30.4
UCECchr12124420040Missense_Mutationrs754030327V467I0.14
UCECchr12124430679Missense_MutationnovelE331K0.46
UCECchr121243247903'UTRnovel0.39
UCECchr12124362269Frame_Shift_Insrs746871841R986Pfs*760.4
UCECchr12124340642SilentnovelQ1766Q0.41
UCECchr12124355458Missense_MutationNAE1119K0.35
UCECchr12124372500Missense_Mutationrs201469143G777R0.47
UCECchr12124457140Missense_Mutationrs754316117R243Q0.27
UCECchr12124356742Frame_Shift_InsnovelC1048Lfs*140.38
UCECchr12124483688Missense_MutationnovelR107C0.18
UCECchr121243249683'UTRnovel0.44
UCECchr12124348255Frame_Shift_DelNAH1302Mfs*120.52
UCECchr12124362136Silentrs757649266A1030A0.49
UCECchr12124402436Silentrs758225706P536P0.44
UCECchr12124378277SilentnovelG709G0.46
UCECchr121243248333'UTRnovel0.3
UCECchr12124344868SilentnovelG1481G0.24
UCECchr121243247833'UTRnovel0.31
UCECchr12124363682Frame_Shift_DelNAI976Sfs*870.31
UCECchr12124495219Silentrs369322766T11T0.4
UCECchr12124354879Missense_MutationNAV1148I0.49
UCECchr12124363682Frame_Shift_DelNAI976Sfs*870.37
UCECchr12124486566Splice_Regionrs371190775D36D0.47
UCECchr12124332399Missense_MutationnovelS2275I0.13
UCECchr12124372456Silentrs367877965P791P0.29
UCECchr12124466287Splice_SitenovelX198_splice0.11
UCECchr12124335233Missense_MutationnovelP2105S0.31
UCECchr12124429701Missense_MutationnovelV354A0.19
UCECchr12124457105Splice_SitenovelX254_splice0.26
UCECchr12124354914Missense_Mutationrs766879930P1136L0.43
UCECchr12124402458Missense_Mutationrs376669119A529V0.23
UCECchr12124363682Frame_Shift_DelNAI976Sfs*870.5
UCECchr12124419976Missense_MutationNAR488Q0.39
UCECchr12124340014Silentrs201611391T1893T0.34
UCECchr12124343053SilentnovelL1630L0.41
UCECchr12124343144SilentnovelT1599T0.38
UCECchr12124362167Frame_Shift_InsnovelR1020Pfs*420.38
UCECchr121243249803'UTRnovel0.33
UCECchr12124332352Missense_MutationnovelL2291M0.39
UCECchr12124335239Missense_MutationnovelL2103M0.14
UCECchr12124362220Silentrs747598845P1002P0.39
UCECchr12124473083Missense_MutationnovelP154T0.29
UCECchr12124333223Missense_MutationnovelP2221H0.3
UCECchr12124356705Frame_Shift_Delrs771862790R1060Vfs*30.35
UCECchr12124350732SilentNAT1233T0.33
UCECchr12124332357Missense_MutationNAK2289T0.48
UCECchr12124343068Missense_MutationNAR1625C0.35
UCECchr121243253473'UTRnovel0.27
UCECchr12124385874Silentrs748585756H630H0.41
UCECchr12124378352Missense_MutationnovelK684N0.29
UCECchr12124348197Missense_MutationnovelA1321V0.47
UCECchr12124430681Missense_MutationNAR330H0.32
UCECchr12124356705Frame_Shift_Delrs771862790R1060Vfs*30.39
UCECchr12124334458Missense_MutationnovelA2191T0.64
UCECchr12124362269Frame_Shift_Insrs746871841R986Pfs*760.51
UCECchr12124333255Silentrs747434424S2210S0.32
UCECchr12124341825Missense_Mutationrs773550297R1729Q0.43
UCECchr12124343194Nonsense_MutationnovelR1583*0.1
UCECchr12124355530Missense_Mutationrs199761768V1095I0.4
UCECchr12124385852Missense_MutationNAA638T0.37
UCECchr12124426749Missense_MutationnovelD401N0.24
UCECchr12124466281SilentnovelQ199Q0.43
UCECchr12124483687Missense_MutationnovelR107H0.4
UCECchr121243247833'UTRnovel0.38
UCECchr12124336880Silentrs538165631A1996A0.33
UCECchr12124340086Missense_Mutationrs753261260Q1869H0.41
UCECchr12124348177Missense_MutationNAE1328K0.38
UCECchr12124362138Missense_Mutationrs536539471A1030T0.27
UCECchr12124426755SilentnovelL399L0.29
UCECchr12124473001Missense_MutationnovelR181Q0.42
UCECchr12124356667SilentnovelP1072P0.17
UCECchr12124363682Frame_Shift_DelNAI976Sfs*870.29
UCECchr12124473090Frame_Shift_DelNAS152Afs*210.21
UCSchr12124348274Frame_Shift_InsnovelR1295Sfs*250.12
UCSchr12124363682Frame_Shift_DelNAI976Sfs*870.43
UCSchr12124426710Missense_MutationnovelG414R0.36
UCSchr12124346594Silentrs754333875P1443P0.32
UVMchr12124402437Frame_Shift_DelnovelK535Rfs*740.09

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BRCADEL0.16396.3933e-07
CHOLDEL0.19440.067545
HNSCDEL0.07090.22646
LIHCDEL0.13242.3723e-05
LUADDEL0.14340.0059643
LUSCDEL0.11180.038823
PAADDEL0.1630.0030251
PRADDEL0.07110.024258
SKCMDEL0.18260.00079981
UCECDEL0.09280.00053229
UCSDEL0.32140.033261

Survival Analysis
CancerP-value Q-value
MESO0.0035

Kaplan-Meier Survival Analysis

SKCM0.035

Kaplan-Meier Survival Analysis

LUSC0.031

Kaplan-Meier Survival Analysis

BRCA0.012

Kaplan-Meier Survival Analysis

COAD0.013

Kaplan-Meier Survival Analysis

PAAD0.019

Kaplan-Meier Survival Analysis

CESC0.0065

Kaplan-Meier Survival Analysis

LAML0.0019

Kaplan-Meier Survival Analysis

UCEC0.034

Kaplan-Meier Survival Analysis

LIHC0.049

Kaplan-Meier Survival Analysis

LGG0.00053

Kaplan-Meier Survival Analysis

OV0.002

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000196498 (Gene tree)
Gene ID
9612
Gene Symbol
NCOR2
Alias
SMRT|SMRTE|TRAC-1|CTG26|TNRC14
Full Name
nuclear receptor corepressor 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
243,179 bases
Position
chr12:124,324,411-124,567,589
Accession
7673
RBP type
non-canonical RBP
Summary
This gene encodes a nuclear receptor co-repressor that mediates transcriptional silencing of certain target genes. The encoded protein is a member of a family of thyroid hormone- and retinoic acid receptor-associated co-repressors. This protein acts as part of a multisubunit complex which includes histone deacetylases to modify chromatin structure that prevents basal transcriptional activity of target genes. Aberrant expression of this gene is associated with certain cancers. Alternate splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Apr 2011]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
15525597Estrogen response element-dependent regulation of transcriptional activation of estrogen receptors alpha and beta by coactivators and corepressors.J Mol Endocrinol2004 OctKlinge CM-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000443451NCOR2-211951--- (aa)--
ENST00000536195NCOR2-222452--- (aa)--
ENST00000473999NCOR2-2181277--- (aa)--
ENST00000413172NCOR2-205532-ENSP00000407357132 (aa)-H7C2R5
ENST00000429285NCOR2-2088475-ENSP000004002812504 (aa)-C9J0Q5
ENST00000418829NCOR2-206563-ENSP00000391389129 (aa)-H7BZU2
ENST00000404621NCOR2-2038520-ENSP000003842022458 (aa)-C9JE98
ENST00000405201NCOR2-2048533-ENSP000003840182514 (aa)-C9JFD3
ENST00000453428NCOR2-214674-ENSP00000400687225 (aa)-H7C1J7
ENST00000461081NCOR2-2162910--- (aa)--
ENST00000494460NCOR2-221339--- (aa)--
ENST00000493859NCOR2-220557--- (aa)--
ENST00000420698NCOR2-2071752-ENSP00000405367493 (aa)-C9J330
ENST00000542927NCOR2-224828-ENSP00000443689275 (aa)-H0YGK8
ENST00000440337NCOR2-210956-ENSP00000398963134 (aa)-H7C184
ENST00000448614NCOR2-213582-ENSP00000408247162 (aa)-C9JNV9
ENST00000542565NCOR2-223746--- (aa)--
ENST00000458234NCOR2-2154675-ENSP000004028081451 (aa)-C9JQE8
ENST00000474079NCOR2-219321--- (aa)--
ENST00000440187NCOR2-209467-ENSP00000396044156 (aa)-H7C0P3
ENST00000404121NCOR2-2027175-ENSP000003856182062 (aa)-C9J7T7
ENST00000464377NCOR2-217499--- (aa)--
ENST00000356219NCOR2-2017226-ENSP000003485512079 (aa)-Q9Y618
ENST00000448008NCOR2-212735-ENSP00000403034245 (aa)-H7C1Y3
Gene Model
Click here to download ENSG00000196498's gene model file
Pathways
Pathway IDPathway NameSource
hsa04330Notch signaling pathwayKEGG
hsa05169Epstein-Barr virus infectionKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000196498Neoplasms3.80520147097714E-517903305
ENSG00000196498Neoplasms4.9494767905779E-517903305
ENSG00000196498Iron7.2780000E-00419880490
ENSG00000196498Body Height1.0840000E-005-
ENSG00000196498Body Height6.8760000E-005-
ENSG00000196498Body Height2.4520000E-005-
ENSG00000196498Platelet Function Tests3.8094700E-005-
ENSG00000196498Cocaine-Related Disorders5E-723958962
ENSG00000196498Neuropsychological Tests7E-619734545
ENSG00000196498Antimetabolites9E-623648065
ENSG00000196498Antineoplastic Agents9E-623648065
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000196498rs1242371212124549387?Cognitive performance19734545EFO_0003926
ENSG00000196498rs1258216812124409638CAdverse response to chemotherapy (neutropenia/leucopenia) (all antimetabolite drugs)23648065[1.21-1.748]1.454GO_0097327|GO_0097329
ENSG00000196498rs15095443112124517777?Cocaine dependence23958962EFO_0002610
ENSG00000196498rs7322542312124421378TMosquito bite size28199695[0.031-0.074] unit increase0.0522744EFO_0008378
ENSG00000196498rs222984012124341916?Balding type 130595370EFO_0007825
ENSG00000196498rs127130912124336159AMale-pattern baldness30573740[0.025-0.041] unit decrease0.033054EFO_0007825
ENSG00000196498rs374150812124328132?Lung function (FVC)30595370EFO_0004312
ENSG00000196498rs127130912124336159ADiastolic blood pressure30224653[0.14-0.22] mmHg decrease0.1786EFO_0006336
ENSG00000196498rs1231416212124342130?Fat-free mass30593698[0.12-0.25] unit increase0.18088EFO_0004995
ENSG00000196498rs1231416212124342130?Fat-free mass30593698[0.2-0.39] unit increase0.29554EFO_0004995
ENSG00000196498rs1231416212124342130?Fat-free mass30593698[0.18-0.3] unit increase0.24049EFO_0004995
ENSG00000196498rs796315112124377180?Eosinophil counts30595370EFO_0004842
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000196498's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000196498NCOR210094.929ENSMUSG00000029478Ncor210096.774Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000118histone deacetylase complex21873635.IBAComponent
GO:0000122negative regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0000122negative regulation of transcription by RNA polymerase II12628926.18052923.19955185.20388878.IMPProcess
GO:0000122negative regulation of transcription by RNA polymerase II-TASProcess
GO:0000790nuclear chromatin21873635.IBAComponent
GO:0000790nuclear chromatin20388878.IDAComponent
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific-ISAFunction
GO:0001012RNA polymerase II regulatory region DNA binding21873635.IBAFunction
GO:0003682chromatin binding21873635.IBAFunction
GO:0003714transcription corepressor activity21873635.IBAFunction
GO:0003714transcription corepressor activity18052923.IDAFunction
GO:0003714transcription corepressor activity12628926.20812024.IMPFunction
GO:0005112Notch binding10713164.IPIFunction
GO:0005515protein binding10395741.10713164.10809664.11013263.11739383.14985122.15016912.16129689.16924111.16980585.19786558.20195357.20467437.20543827.20812024.