EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
19177010Interleukin-6 affects cell death escaping mechanisms acting on Bax-Ku70-Clusterin interactions in human colon cancer progression.Cell Cycle2009 Feb 1Pucci S-
25818292Direct involvement of retinoblastoma family proteins in DNA repair by non-homologous end-joining.Cell Rep2015 Mar 31Cook Rdoi: 10.1016/j.celrep.2015.02.059
18546291Ku70 predicts response and primary tumor recurrence after therapy in locally advanced head and neck cancer.Int J Cancer2008 Sep 1Pav??n MAdoi: 10.1002/ijc.23635.
24615008Association between polymorphisms at promoters of XRCC5 and XRCC6 genes and risk of breast cancer.Med Oncol2014 AprRajaei Mdoi: 10.1007/s12032-014-0885-8
27328741Gene polymorphism in DNA repair genes XRCC1 and XRCC6 and association with colorectal cancer in Swedish patients.APMIS2016 SepDimberg Jdoi: 10.1111/apm.12563
23745766Association between the XRCC6 Promoter rs2267437 polymorphism and cancer risk: evidence based on the current literature.Genet Test Mol Biomarkers2013 AugXu Hdoi: 10.1089/gtmb.2013.0083
19219618A polymorphism in the promoter region of Ku70/XRCC6, associated with breast cancer risk and oestrogen exposure.J Cancer Res Clin Oncol2009 SepWillems Pdoi: 10.1007/s00432-009-0556-x
29397516Role of polymorphic XRCC6 (Ku70)/XRCC7 (DNA-PKcs) genes towards susceptibility and prognosis of lung cancer patients undergoing platinum based doublet chemotherapy.Mol Biol Rep2018 JunSingh Adoi: 10.1007/s11033-018-4158-z
21556760The Ku70 -1310C/G promoter polymorphism is associated with breast cancer susceptibility in Chinese Han population.Mol Biol Rep2012 JanHe Wdoi: 10.1007/s11033-011-0773-7
23098447Association between XRCC5, 6 and 7 gene polymorphisms and the risk of breast cancer: a HuGE review and meta-analysis.Asian Pac J Cancer Prev2012Zhou LP-
22745744Interaction of caveolin-1 with Ku70 inhibits Bax-mediated apoptosis.PLoS One2012Zou Hdoi: 10.1371/journal.pone.0039379
22399625Association of DNA double-strand break gene XRCC6 genotypes and lung cancer in Taiwan.Anticancer Res2012 MarHsia TC-
21575261Genetic polymorphisms of DNA double strand break gene Ku70 and gastric cancer in Taiwan.BMC Cancer2011 May 17Yang MDdoi: 10.1186/1471-2407-11-174.
17982634Immunohistochemical analysis of Ku70/86 expression of breast cancer tissues.Oncol Rep2007 DecSomeya M-
23154512Loss of expression of the double strand break repair protein ATM is associated with worse prognosis in colorectal cancer and loss of Ku70 expression is associated with CIN.Oncotarget2012 NovBeggs AD-
20127252BRCA1 is a negative modulator of the PRC2 complex.EMBO J2013 May 29Wang Ldoi: 10.1038/emboj.2013.95
23271361Quantitative assessment of the association between XRCC6 C1310G polymorphism and cancer risk.Tumour Biol2013 AprJiang Hdoi: 10.1007/s13277-012-0607-9
26754263Association between single-nucleotide polymorphisms in DNA double-strand break repair genes and prostate cancer aggressiveness in the Spanish population.Prostate Cancer Prostatic Dis2016 MarHenr??quez-Hern??ndez LAdoi: 10.1038/pcan.2015.63
14570916The Ku antigen-recombination signal-binding protein Jkappa complex binds to the nuclear factor-kappaB p50 promoter and acts as a positive regulator of p50 expression in human gastric cancer cells.J Biol Chem2004 Jan 2Lim JW-
19906305Ku proteins interact with activator protein-2 transcription factors and contribute to ERBB2 overexpression in breast cancer cell lines.Breast Cancer Res2009Nolens Gdoi: 10.1186/bcr2450
23349316Castration therapy results in decreased Ku70 levels in prostate cancer.Clin Cancer Res2013 Mar 15Al-Ubaidi FLdoi: 10.1158/1078-0432.CCR-12-2795
24382701Comprehensive analyses of DNA repair pathways, smoking and bladder cancer risk in Los Angeles and Shanghai.Int J Cancer2014 Jul 15Corral Rdoi: 10.1002/ijc.28693
18487076Oral cancer and genetic polymorphism of DNA double strand break gene Ku70 in Taiwan.Oral Oncol2008 NovBau DTdoi: 10.1016/j.oraloncology.2008.02.008
17671430Bin1 interacts with and restrains the DNA end-binding protein complex Ku.Cell Cycle2007 Aug 1Ramalingam A-
15905197Justicidin A decreases the level of cytosolic Ku70 leading to apoptosis in human colorectal cancer cells.Carcinogenesis2005 OctLee JC-
15827325Ku protein targeting by Ku70 small interfering RNA enhances human cancer cell response to topoisomerase II inhibitor and gamma radiation.Mol Cancer Ther2005 AprAyene IS-
24769731Role of Ku70 in deubiquitination of Mcl-1 and suppression of apoptosis.Cell Death Differ2014 JulWang Bdoi: 10.1038/cdd.2014.42
22524845Association between the Ku70-1310C/G promoter polymorphism and cancer risk: a meta-analysis.Asian Pac J Cancer Prev2012Xu L-
28153717Ku70 inhibits gemcitabine-induced DNA damage and pancreatic cancer cell apoptosis.Biochem Biophys Res Commun2017 Mar 18Ma Jdoi: 10.1016/j.bbrc.2017.01.146
27384990SIRT1 and LSD1 competitively regulate KU70 functions in DNA repair and mutation acquisition in cancer cells.Oncotarget2016 Aug 2Roth Mdoi: 10.18632/oncotarget.10328.

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2241637758Missense_MutationnovelR247H0.39
BLCAchr2241646972Missense_Mutationrs776773263P284S0.1
BRCAchr2241647004Missense_MutationnovelE294D0.08
BRCAchr2241663700Missense_MutationNAT572M0.13
BRCAchr2241653641SilentNAV414V0.23
BRCAchr2241636525Missense_Mutationrs765303000R115Q0.09
BRCAchr2241622035Missense_MutationNAE11Q0.25
BRCAchr2241628195Missense_MutationNAE54K0.22
BRCAchr2241636673Missense_MutationNAK164N0.17
BRCAchr2241656900Splice_Regionnovel0.18
CESCchr2241646894Splice_SitenovelX258_splice0.28
CESCchr2241646905Frame_Shift_InsnovelL263Sfs*60.33
CESCchr2241656977Missense_MutationnovelP456A0.18
CESCchr2241653545SilentnovelF382F0.25
COADchr2241646968Missense_MutationNAK282N0.35
COADchr2241628150Frame_Shift_InsNAL41Ffs*30.39
COADchr2241653603Frame_Shift_DelNAR403Afs*250.35
COADchr2241646960Missense_MutationNAA280S0.45
COADchr2241658287Frame_Shift_DelnovelH486Pfs*120.12
COADchr2241646971SilentnovelP283P0.14
COADchr2241656923Missense_MutationNAP438S0.24
COADchr2241663782Silentrs369068201L599L0.2
COADchr2241657020Missense_Mutationrs749612494R470H0.12
COADchr2241637651SilentNAF211F0.12
COADchr2241650838Missense_MutationNAH359R0.19
COADchr2241661346Missense_MutationNAA513V0.45
COADchr2241647069Missense_MutationNAT316I0.14
ESCAchr2241661345Missense_Mutationrs61754572A513T0.28
ESCAchr2241637758Missense_MutationnovelR247H0.41
ESCAchr2241636234Missense_MutationnovelQ106R0.11
GBMchr2241637783Frame_Shift_InsnovelL256Vfs*50.45
GBMchr2241647065Missense_MutationnovelD315N0.47
HNSCchr2241628151Frame_Shift_DelnovelL41Wfs*170.21
HNSCchr2241637718Missense_MutationnovelE234Q0.13
HNSCchr2241636120Missense_MutationnovelQ68R0.18
HNSCchr2241650857Silentrs201816814S365S0.12
KIRPchr22416640133'UTRnovel0.33
KIRPchr22416639433'UTRnovel0.39
LAMLchr2241622073Missense_MutationnovelN23K0.05
LAMLchr2241628150Frame_Shift_InsNAL41Ffs*30.23
LAMLchr2241663735Missense_MutationnovelA584T0.08SAP
LIHCchr2241646962SilentNAA280A0.29
LIHCchr2241661388Frame_Shift_DelnovelL528Ifs*320.24
LUADchr2241661414Missense_MutationnovelP536S0.11
LUADchr2241653683Frame_Shift_InsnovelP429Sfs*350.07
LUADchr2241636771Splice_SiteNAX197_splice0.21
LUADchr2241646931Missense_MutationNAS270C0.1
LUADchr2241628179Missense_MutationNAM48I0.42
LUADchr2241663657Missense_MutationnovelE558Q0.33
LUADchr2241653690Missense_MutationnovelG431C0.36
LUADchr2241658265Missense_MutationNAE479Q0.09
LUADchr2241646915Missense_MutationnovelK265E0.27
LUSCchr2241663739Missense_MutationnovelC585F0.51SAP
LUSCchr2241646986SilentnovelL288L0.17
LUSCchr2241653687Missense_MutationNAP430A0.06
LUSCchr2241646922Missense_Mutationrs369020045I267T0.19
LUSCchr2241646905SilentNAL261L0.04
LUSCchr2241636647Missense_MutationNAD156N0.11
LUSCchr2241622064SilentNAQ20Q0.3
OVchr2241653653Missense_MutationNAE418D0.22
OVchr2241647027Missense_MutationNAT302I0.16
OVchr2241636770Missense_MutationNAG197R0.16
OVchr22416638313'UTRnovel0.25
OVchr22416638323'UTRrs7763042690.22
PAADchr2241637673Missense_MutationnovelD219Y0.13
PRADchr2241663700Missense_MutationNAT572M0.22
PRADchr2241646986SilentnovelL288L0.35
PRADchr2241628150Frame_Shift_InsNAL41Ffs*30.51
PRADchr2241636737Missense_MutationnovelA186T0.1
READchr2241636678Missense_MutationnovelI166T0.39
READchr2241656938Missense_MutationnovelK443E0.32
READchr2241636764Missense_MutationnovelD195Y0.37
SARCchr2241622073SilentnovelN23N0.41
SKCMchr22416638433'UTRnovel0.5
SKCMchr22416638443'UTRrs7649892900.52
SKCMchr2241656978Missense_MutationnovelP456L0.22
SKCMchr2241636197Missense_MutationNAK94E0.14
SKCMchr2241647028SilentnovelT302T0.22
SKCMchr2241637660SilentNAS214S0.23
SKCMchr2241647008Missense_MutationNAV296M0.08
SKCMchr2241636638Missense_MutationNAL153F0.17
STADchr2241656902Splice_SiteNAX431_splice0.11
STADchr2241637612SilentNAI198I0.58
STADchr2241663685Missense_MutationnovelH567R0.46
STADchr2241636730SilentnovelA183A0.56
STADchr2241636523SilentNAK114K0.32
STADchr2241658323Missense_MutationNAM498R0.25
STADchr2241628151Frame_Shift_DelnovelL41Wfs*170.24
STADchr22416638273'UTRrs5510603920.33
UCECchr2241622019SilentnovelE5E0.22
UCECchr22416638303'UTRnovel0.15
UCECchr2241650777Missense_MutationnovelR339W0.04
UCECchr22416219935'UTRnovel0.47
UCECchr22416638453'UTRrs96538420.34
UCECchr2241637636Missense_MutationnovelK206N0.05
UCECchr2241663621Splice_SiteNAX546_splice0.21
UCECchr2241663688Missense_MutationNAI568T0.37
UCECchr2241636178Missense_MutationnovelF87L0.1
UCECchr2241636156Missense_MutationnovelR80Q0.29
UCECchr2241636570Missense_Mutationrs780415976R130H0.18
UCECchr2241663633Missense_MutationnovelS550P0.23
UCECchr2241637677Missense_MutationnovelI220T0.31
UCECchr22416638293'UTRrs3763788490.15
UCECchr2241636188Missense_Mutationrs373148769E91K0.35
UCECchr2241653638SilentnovelL413L0.55
UCECchr22416638663'UTRnovel0.32
UCECchr2241647064Missense_MutationnovelS314R0.33
UCECchr2241646981Missense_MutationnovelK287Q0.28
UCECchr2241658274Missense_MutationNAV482M0.41
UCECchr22416638563'UTRnovel0.36
UCECchr2241646918Missense_MutationNAD266Y0.2
UCECchr2241663791SilentnovelA602A0.29
UCECchr2241653682Missense_MutationnovelT428N0.31
UCECchr2241636227Missense_Mutationrs757018461V104I0.13
UCECchr2241650864Missense_Mutationrs761413214V368M0.23
UCECchr2241653597Missense_MutationnovelY400N0.38
UCECchr2241650755Missense_MutationNAK331N0.46
UCECchr2241650863Silentrs368334650F367F0.49
UCECchr2241628226Missense_MutationnovelI64T0.45
UCECchr2241650843Missense_MutationnovelY361H0.21
UCECchr2241628151Frame_Shift_DelnovelL41Wfs*170.38
UCECchr2241636528Missense_MutationNAI116S0.23

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.06250.21158
PCPGDEL0.33950.044123
THCADEL0.15630.046486
THYMDEL0.0650.063154
UCSDEL0.60710.0013619

Survival Analysis
CancerP-value Q-value
THYM0.017

Kaplan-Meier Survival Analysis

KIRC0.0057

Kaplan-Meier Survival Analysis

ACC0.00072

Kaplan-Meier Survival Analysis

LUSC0.026

Kaplan-Meier Survival Analysis

PCPG0.0057

Kaplan-Meier Survival Analysis

CESC0.047

Kaplan-Meier Survival Analysis

READ0.00064

Kaplan-Meier Survival Analysis

LAML0.0022

Kaplan-Meier Survival Analysis

LIHC0.00046

Kaplan-Meier Survival Analysis

DLBC0.018

Kaplan-Meier Survival Analysis

LGG0.04

Kaplan-Meier Survival Analysis

THCA0.034

Kaplan-Meier Survival Analysis

LUAD0.0084

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000196419 (Gene tree)
Gene ID
2547
Gene Symbol
XRCC6
Alias
D22S731|D22S671|KU70|ML8|G22P1
Full Name
X-ray repair cross complementing 6
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
42,930 bases
Position
chr22:41,621,119-41,664,048
Accession
4055
RBP type
canonical RBP
Summary
The p70/p80 autoantigen is a nuclear complex consisting of two subunits with molecular masses of approximately 70 and 80 kDa. The complex functions as a single-stranded DNA-dependent ATP-dependent helicase. The complex may be involved in the repair of nonhomologous DNA ends such as that required for double-strand break repair, transposition, and V(D)J recombination. High levels of autoantibodies to p70 and p80 have been found in some patients with systemic lupus erythematosus. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000384082SAPPF02037.277.9e-0911
ENSP00000403679SAPPF02037.277.9e-0911
ENSP00000384941SAPPF02037.279.5e-0911
ENSP00000352257SAPPF02037.271.1e-0811
ENSP00000353192SAPPF02037.271.1e-0811
ENSP00000384257SAPPF02037.271.1e-0811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
21846828Host- and strain-specific regulation of influenza virus polymerase activity by interacting cellular proteins.MBio2011 Aug 16Bortz Edoi: 10.1128/mBio.00151-11
25712094Identification and characterization of intracellular proteins that bind oligonucleotides with phosphorothioate linkages.Nucleic Acids Res2015 Mar 11Liang XHdoi: 10.1093/nar/gkv143
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000405878XRCC6-2052200-ENSP00000384257609 (aa)-P12956
ENST00000405506XRCC6-2041958-ENSP00000384082559 (aa)-B1AHC9
ENST00000428575XRCC6-2062148-ENSP00000403679559 (aa)-B1AHC9
ENST00000464116XRCC6-207359--- (aa)--
ENST00000478914XRCC6-208550--- (aa)--
ENST00000360079XRCC6-2022296-ENSP00000353192609 (aa)-P12956
ENST00000402580XRCC6-2032006-ENSP00000384941568 (aa)-P12956
ENST00000359308XRCC6-2012709-ENSP00000352257609 (aa)-P12956
Gene Model
Click here to download ENSG00000196419's gene model file
Pathways
Pathway IDPathway NameSource
hsa03450Non-homologous end-joiningKEGG
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000196419rs287411212241629819GHighest math class taken30038396[0.011-0.023] unit decrease0.0172EFO_0004875
ENSG00000196419rs287411212241629819AEducational attainment (MTAG)30038396[0.0092-0.0158] unit increase0.0125EFO_0004784
ENSG00000196419rs287411212241629819AHighest math class taken (MTAG)30038396[0.014-0.023] unit increase0.0182EFO_0004875
ENSG00000196419rs731613242241642782TPulse pressure28135244[0.36-0.63] unit increase0.496EFO_0005763
ENSG00000196419rs287411212241629819AIntelligence29942086z-score increase6.609EFO_0004337
ENSG00000196419rs731613242241642782TBreast cancer29059683[1.02-1.09] (Oncoarray)1.06EFO_0000305
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000196419's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000196419XRCC69956.414ENSAPOG00000012704xrcc69956.414Acanthochromis_polyacanthus
ENSG00000196419XRCC69956.086ENSACIG00000021277xrcc69956.086Amphilophus_citrinellus
ENSG00000196419XRCC69955.337ENSAOCG00000021344xrcc69955.410Amphiprion_ocellaris
ENSG00000196419XRCC69955.665ENSAPEG00000020712xrcc69955.738Amphiprion_percula
ENSG00000196419XRCC69956.250ENSATEG00000007119xrcc69956.086Anabas_testudineus
ENSG00000196419XRCC69771.402ENSAPLG00000004469XRCC69970.962Anas_platyrhynchos
ENSG00000196419XRCC610085.714ENSANAG00000035230-10085.714Aotus_nancymaae
ENSG00000196419XRCC610098.686ENSANAG00000018684XRCC610098.686Aotus_nancymaae
ENSG00000196419XRCC610083.713ENSANAG00000023445-10083.713Aotus_nancymaae
ENSG00000196419XRCC610087.192ENSANAG00000020017-9196.535Aotus_nancymaae
ENSG00000196419XRCC69956.414ENSACLG00000018608xrcc69956.250Astatotilapia_calliptera
ENSG00000196419XRCC69957.516ENSAMXG00000007545xrcc69957.353Astyanax_mexicanus
ENSG00000196419XRCC610098.522ENSCJAG00000045512XRCC610098.522Callithrix_jacchus
ENSG00000196419XRCC69987.007ENSTSYG00000011348XRCC69987.007Carlito_syrichta
ENSG00000196419XRCC610092.447ENSCCAG00000030041-9592.447Cebus_capucinus
ENSG00000196419XRCC610079.310ENSCCAG00000035711-10079.310Cebus_capucinus
ENSG00000196419XRCC69098.438ENSCCAG00000030468-10098.438Cebus_capucinus
ENSG00000196419XRCC610079.310ENSCCAG00000037663-9778.654Cebus_capucinus
ENSG00000196419XRCC610099.179ENSCATG00000042366XRCC610099.179Cercocebus_atys
ENSG00000196419XRCC69985.667ENSCLAG00000016669XRCC69985.667Chinchilla_lanigera
ENSG00000196419XRCC610099.179ENSCSAG00000005784XRCC610099.179Chlorocebus_sabaeus
ENSG00000196419XRCC69974.056ENSCPBG00000020535XRCC69974.220Chrysemys_picta_bellii
ENSG00000196419XRCC69735.949ENSCING00000000633-9535.678Ciona_intestinalis
ENSG00000196419XRCC610099.179ENSCANG00000031032XRCC610099.179Colobus_angolensis_palliatus
ENSG00000196419XRCC69977.138ENSCGRG00001019029Xrcc69977.138Cricetulus_griseus_chok1gshd
ENSG00000196419XRCC69984.868ENSCGRG00000001528Xrcc69984.868Cricetulus_griseus_crigri
ENSG00000196419XRCC69956.373ENSCSEG00000020434xrcc69956.209Cynoglossus_semilaevis
ENSG00000196419XRCC69956.158ENSCVAG00000002189xrcc69956.158Cyprinodon_variegatus
ENSG00000196419XRCC69958.033ENSDARG00000071551xrcc69958.361Danio_rerio
ENSG00000196419XRCC68476.923ENSETEG00000015333-7876.923Echinops_telfairi
ENSG00000196419XRCC69985.691ENSEASG00005001514XRCC69986.020Equus_asinus_asinus
ENSG00000196419XRCC69985.197ENSECAG00000017563XRCC69986.275Equus_caballus
ENSG00000196419XRCC610054.560ENSELUG00000020301xrcc610054.560Esox_lucius
ENSG00000196419XRCC69970.328ENSFALG00000011908XRCC69769.771Ficedula_albicollis
ENSG00000196419XRCC69957.190ENSFHEG00000016833xrcc69957.026Fundulus_heteroclitus
ENSG00000196419XRCC69948.768ENSGMOG00000013524xrcc69948.768Gadus_morhua
ENSG00000196419XRCC69969.722ENSGALG00000011932XRCC69969.558Gallus_gallus
ENSG00000196419XRCC69955.065ENSGAFG00000008130xrcc69955.065Gambusia_affinis
ENSG00000196419XRCC69954.098ENSGACG00000004868xrcc69954.098Gasterosteus_aculeatus
ENSG00000196419XRCC69973.892ENSGAGG00000017518XRCC69974.056Gopherus_agassizii
ENSG00000196419XRCC610099.672ENSGGOG00000015885XRCC610099.672Gorilla_gorilla
ENSG00000196419XRCC69657.196ENSHBUG00000023281xrcc69956.506Haplochromis_burtoni
ENSG00000196419XRCC69984.020ENSHGLG00000018078XRCC69984.020Heterocephalus_glaber_female
ENSG00000196419XRCC69984.020ENSHGLG00100011264XRCC69984.020Heterocephalus_glaber_male
ENSG00000196419XRCC69953.618ENSHCOG00000009821xrcc69953.947Hippocampus_comes
ENSG00000196419XRCC69757.038ENSIPUG00000000767xrcc69657.167Ictalurus_punctatus
ENSG00000196419XRCC69988.158ENSSTOG00000009490XRCC69987.993Ictidomys_tridecemlineatus
ENSG00000196419XRCC69978.618ENSJJAG00000017136Xrcc69979.605Jaculus_jaculus
ENSG00000196419XRCC69956.158ENSKMAG00000002141xrcc69955.993Kryptolebias_marmoratus
ENSG00000196419XRCC69955.556ENSLBEG00000002691xrcc69955.556Labrus_bergylta
ENSG00000196419XRCC69058.824ENSLOCG00000011533xrcc69958.824Lepisosteus_oculatus
ENSG00000196419XRCC610099.179ENSMFAG00000003352XRCC610099.179Macaca_fascicularis
ENSG00000196419XRCC610099.179ENSMMUG00000001856XRCC610099.179Macaca_mulatta
ENSG00000196419XRCC610099.179ENSMNEG00000035076XRCC610099.179Macaca_nemestrina
ENSG00000196419XRCC610099.179ENSMLEG00000019869XRCC610099.179Mandrillus_leucophaeus
ENSG00000196419XRCC69655.331ENSMAMG00000003405xrcc69655.403Mastacembelus_armatus
ENSG00000196419XRCC69954.918ENSMAMG00000003368xrcc69955.082Mastacembelus_armatus
ENSG00000196419XRCC69956.414ENSMZEG00005028080xrcc69956.250Maylandia_zebra
ENSG00000196419XRCC69969.494ENSMGAG00000012146XRCC69969.331Meleagris_gallopavo
ENSG00000196419XRCC69984.539ENSMAUG00000017340Xrcc69984.539Mesocricetus_auratus
ENSG00000196419XRCC69984.375ENSMOCG00000015717Xrcc69984.539Microtus_ochrogaster
ENSG00000196419XRCC69954.680ENSMMOG00000003536xrcc69954.680Mola_mola
ENSG00000196419XRCC69957.401ENSMALG00000013912xrcc69457.237Monopterus_albus
ENSG00000196419XRCC69977.467MGP_CAROLIEiJ_G0020067Xrcc69977.467Mus_caroli
ENSG00000196419XRCC69983.224ENSMUSG00000022471Xrcc69983.224Mus_musculus
ENSG00000196419XRCC69982.401MGP_PahariEiJ_G0020069Xrcc69982.401Mus_pahari
ENSG00000196419XRCC69783.272MGP_SPRETEiJ_G0020967Xrcc69983.821Mus_spretus
ENSG00000196419XRCC69983.553ENSNGAG00000013750Xrcc69983.553Nannospalax_galili
ENSG00000196419XRCC69956.908ENSNBRG00000004125xrcc69956.743Neolamprologus_brichardi
ENSG00000196419XRCC69782.505ENSOPRG00000002386XRCC69982.931Ochotona_princeps
ENSG00000196419XRCC69982.208ENSODEG00000015847XRCC69982.372Octodon_degus
ENSG00000196419XRCC69956.743ENSONIG00000019715xrcc69956.908Oreochromis_niloticus
ENSG00000196419XRCC67479.612ENSOANG00000011328XRCC69979.612Ornithorhynchus_anatinus
ENSG00000196419XRCC610086.207ENSOCUG00000006948XRCC610086.535Oryctolagus_cuniculus
ENSG00000196419XRCC69955.574ENSORLG00020007820xrcc69955.574Oryzias_latipes_hni
ENSG00000196419XRCC69954.976ENSORLG00015006406xrcc69955.246Oryzias_latipes_hsok
ENSG00000196419XRCC69954.812ENSOMEG00000008998xrcc69954.812Oryzias_melastigma
ENSG00000196419XRCC69987.171ENSOGAG00000008821XRCC69987.007Otolemur_garnettii
ENSG00000196419XRCC694100.000ENSPPAG00000037167XRCC6100100.000Pan_paniscus
ENSG00000196419XRCC6100100.000ENSPTRG00000022548XRCC6100100.000Pan_troglodytes
ENSG00000196419XRCC6100100.000ENSPTRG00000045824XRCC6100100.000Pan_troglodytes
ENSG00000196419XRCC610099.015ENSPANG00000001252XRCC610099.015Papio_anubis
ENSG00000196419XRCC69960.526ENSPKIG00000003974xrcc69960.526Paramormyrops_kingsleyae
ENSG00000196419XRCC69955.537ENSPMGG00000014220xrcc610055.702Periophthalmus_magnuspinnatus
ENSG00000196419XRCC69983.553ENSPEMG00000023446Xrcc69983.553Peromyscus_maniculatus_bairdii
ENSG00000196419XRCC610079.016ENSPCIG00000026409XRCC69978.852Phascolarctos_cinereus
ENSG00000196419XRCC69955.556ENSPFOG00000017173xrcc69955.392Poecilia_formosa
ENSG00000196419XRCC69955.229ENSPLAG00000000562xrcc69955.065Poecilia_latipinna
ENSG00000196419XRCC69955.719ENSPMEG00000018478xrcc69955.556Poecilia_mexicana
ENSG00000196419XRCC69955.537ENSPREG00000020957xrcc69355.375Poecilia_reticulata
ENSG00000196419XRCC610088.670ENSPPYG00000011876XRCC610088.670Pongo_abelii
ENSG00000196419XRCC69985.033ENSPVAG00000001168XRCC69984.704Pteropus_vampyrus
ENSG00000196419XRCC69956.414ENSPNYG00000003815xrcc69953.521Pundamilia_nyererei
ENSG00000196419XRCC69983.388ENSRNOG00000006392Xrcc69983.388Rattus_norvegicus
ENSG00000196419XRCC610099.120ENSRBIG00000039794XRCC610099.120Rhinopithecus_bieti
ENSG00000196419XRCC610099.179ENSRROG00000030297XRCC610099.179Rhinopithecus_roxellana
ENSG00000196419XRCC67385.504ENSSBOG00000024724-10085.504Saimiri_boliviensis_boliviensis
ENSG00000196419XRCC69978.161ENSSHAG00000010790XRCC69977.833Sarcophilus_harrisii
ENSG00000196419XRCC69960.820ENSSFOG00015014409xrcc69960.656Scleropages_formosus
ENSG00000196419XRCC69956.743ENSSMAG00000006496xrcc69956.743Scophthalmus_maximus
ENSG00000196419XRCC69956.536ENSSDUG00000007542xrcc69956.373Seriola_dumerili
ENSG00000196419XRCC69955.719ENSSLDG00000009974xrcc69955.556Seriola_lalandi_dorsalis
ENSG00000196419XRCC69973.727ENSSPUG00000012086XRCC69973.399Sphenodon_punctatus
ENSG00000196419XRCC69956.373ENSSPAG00000015199xrcc69956.209Stegastes_partitus
ENSG00000196419XRCC69771.956ENSTGUG00000009852-9572.165Taeniopygia_guttata
ENSG00000196419XRCC69955.263ENSTRUG00000017070xrcc69955.099Takifugu_rubripes
ENSG00000196419XRCC69657.246ENSTNIG00000012947xrcc69956.949Tetraodon_nigroviridis
ENSG00000196419XRCC69778.309ENSTBEG00000011736XRCC69978.485Tupaia_belangeri
ENSG00000196419XRCC69971.217ENSTTRG00000006749XRCC69971.546Tursiops_truncatus
ENSG00000196419XRCC69955.556ENSXMAG00000009691xrcc69955.392Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000723telomere maintenance21873635.IBAProcess
GO:0000723telomere maintenance15824061.18710952.24095731.TASProcess
GO:0000783nuclear telomere cap complex15100233.TASComponent
GO:0000784nuclear chromosome, telomeric region19135898.HDAComponent
GO:0000784nuclear chromosome, telomeric region21873635.IBAComponent
GO:0002218activation of innate immune response28712728.IDAProcess
GO:0003677DNA binding1537839.NASFunction
GO:0003684damaged DNA binding-IEAFunction
GO:0003690double-stranded DNA binding21873635.IBAFunction
GO:0003691double-stranded telomeric DNA binding10409678.IDAFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0004003ATP-dependent DNA helicase activity-IEAFunction
GO:0005515protein binding8621488.10984620.11328876.12145306.12377759.14734561.15075319.15205477.15383276.15383534.15782130.16169070.17124166.17159921.17220478.17283121.17308091.17334224.19303849.20711232.21044950.21070772.21146485.21575865.21679440.22442688.22451927.22504299.23685356.24095731.24610814.24965446.25574025.25749521.25852083.26175416.26359349.26496610.28330616.28959974.30021884.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005576extracellular region-TASComponent
GO:0005634nucleus10508516.TASComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005667transcription factor complex12145306.IDAComponent
GO:0005730nucleolus27829214.IDAComponent
GO:0005829cytosol-TASComponent
GO:0006266DNA ligation9826654.TASProcess
GO:0006303double-strand break repair via nonhomologous end joining21873635.IBAProcess
GO:0006303double-strand break repair via nonhomologous end joining20383123.26359349.IMPProcess
GO:0006303double-strand break repair via nonhomologous end joining15824061.TASProcess
GO:0006310DNA recombination-IEAProcess
GO:0007420brain development-IEAProcess
GO:0008022protein C-terminus binding10783163.IPIFunction
GO:0016020membrane19946888.HDAComponent
GO:0030332cyclin binding15159402.IPIFunction
GO:0032481positive regulation of type I interferon production-TASProcess
GO:0032508DNA duplex unwinding-IEAProcess
GO:0032991protein-containing complex22504299.IDAComponent
GO:0032993protein-DNA complex22504299.IDAComponent
GO:0034774secretory granule lumen-TASComponent
GO:0042162telomeric DNA binding21873635.IBAFunction
GO:0043312neutrophil degranulation-TASProcess
GO:0043564Ku70:Ku80 complex21873635.IBAComponent
GO:0043564Ku70:Ku80 complex20383123.24095731.26359349.IDAComponent
GO:0044212transcription regulatory region DNA binding18809223.IDAFunction
GO:0044877protein-containing complex binding12377759.IPIFunction
GO:0045087innate immune response-IEAProcess
GO:0045860positive regulation of protein kinase activity22504299.IDAProcess
GO:0045892negative regulation of transcription, DNA-templated8621488.IMPProcess
GO:0045893positive regulation of transcription, DNA-templated12145306.IDAProcess
GO:0045893positive regulation of transcription, DNA-templated18809223.IMPProcess
GO:0045944positive regulation of transcription by RNA polymerase II18809223.IMPProcess
GO:0048660regulation of smooth muscle cell proliferation25852083.IMPProcess
GO:0051290protein heterotetramerization24095731.IDAProcess
GO:00515755'-deoxyribose-5-phosphate lyase activity20383123.IMPFunction
GO:0070419nonhomologous end joining complex20383123.25941166.IDAComponent
GO:0071475cellular hyperosmotic salinity response-IEAProcess
GO:0071480cellular response to gamma radiation21873635.IBAProcess
GO:0071480cellular response to gamma radiation26359349.IDAProcess
GO:0071481cellular response to X-ray21873635.IBAProcess
GO:0075713establishment of integrated proviral latency-TASProcess
GO:0097680double-strand break repair via classical nonhomologous end joining24095731.IDAProcess
GO:1904813ficolin-1-rich granule lumen-TASComponent
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