EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr12122605033Missense_Mutationrs542508586E1778K0.52
BLCAchr12122561950SilentnovelL506L0.23
BLCAchr12122615072Missense_MutationnovelL1987V0.14
BLCAchr12122551363Splice_SitenovelX377_splice0.41
BLCAchr12122587827Missense_MutationnovelL1283F0.51
BLCAchr12122562642Missense_MutationnovelL516R0.58
BLCAchr12122579941Missense_MutationnovelV960L0.2
BLCAchr12122618381SilentnovelQ2023Q0.24
BLCAchr12122538422Missense_MutationnovelH112Y0.43
BLCAchr12122586700Splice_Siters779572734X1225_splice0.21
BLCAchr12122610890Missense_MutationNAS1871L0.21
BLCAchr12122584309Missense_MutationnovelT1099S0.47
BLCAchr12122587812Missense_MutationNAS1278A0.09
BLCAchr12122594362SilentNAT1444T0.37
BLCAchr12122584450Missense_MutationnovelD1146N0.16
BLCAchr12122602874Missense_MutationnovelS1624W0.35
BLCAchr12122604571Missense_MutationnovelF1703L0.11
BLCAchr12122602674Frame_Shift_DelnovelA1587Pfs*30.25
BLCAchr12122573227Missense_MutationnovelR742K0.06
BLCAchr12122577777Missense_MutationnovelD943H0.23
BLCAchr12122604957SilentNAL1752L0.46
BRCAchr12122584953Missense_MutationNAR1166K0.21
BRCAchr12122582874Missense_MutationnovelK1051R0.15
BRCAchr12122530073Missense_MutationNAD4Y0.3
BRCAchr12122574293Silentrs768380870N765N0.1
BRCAchr12122620468Intronnovel0.13
BRCAchr12122622469Missense_MutationNAS2126T0.14
BRCAchr12122584329SilentNAL1105L0.38
BRCAchr12122575853Missense_Mutationrs769739544R847Q0.15
BRCAchr12122577029Splice_RegionNAQ907Q0.29
BRCAchr12122580608Missense_MutationNAL974V0.38
BRCAchr12122604887Missense_Mutationrs766109359R1729H0.33
BRCAchr12122604608Nonsense_MutationNAE1716*0.14
BRCAchr12122604898Missense_MutationnovelE1733Q0.06
CESCchr12122539733Missense_MutationnovelE142Q0.35
CESCchr12122574304Nonsense_MutationNAS769*0.15
CESCchr12122573241Missense_MutationNAE747Q0.27
CESCchr12122573167Missense_MutationNAR722Q0.33
CESCchr12122577780Missense_MutationNAH944N0.43
CESCchr12122568298Missense_MutationNAD548N0.43
CESCchr12122549827Missense_Mutationrs147259173S350F0.37
CESCchr12122602875SilentNAS1624S0.26
CESCchr12122594351Missense_MutationNAD1441H0.4
CESCchr12122603153Frame_Shift_InsnovelT1671Sfs*300.23
CESCchr12122603154Missense_MutationnovelT1671K0.23
CESCchr12122586741SilentnovelY1238Y0.31
CESCchr12122534758Missense_MutationNAR75T0.11
CESCchr12122604880Missense_MutationNAE1727K0.25
CESCchr12122577736Missense_MutationNAR929T0.36
CESCchr12122575862Missense_MutationnovelG850A0.23
CESCchr12122594375Missense_MutationnovelE1449Q0.32
CESCchr12122584987Missense_MutationNAM1177I0.28
CESCchr12122587869Missense_MutationNAE1297K0.55
COADchr12122544166Missense_MutationnovelG189E0.26
COADchr12122542097Missense_MutationNAT165A0.37
COADchr12122590647Missense_MutationNAG1347D0.32
COADchr12122605055Missense_MutationNAR1785I0.38
COADchr12122603057Missense_MutationNAA1639T0.14
COADchr12122557464Nonsense_MutationnovelW451*0.17
COADchr12122568365Missense_Mutationrs781762358R570Q0.21
COADchr12122605055Missense_MutationNAR1785I0.07
COADchr12122577754Missense_Mutationrs754831260R935Q0.26
COADchr12122584897Missense_MutationNAF1147L0.25
COADchr12122604999Silentrs751686054I1766I0.34
COADchr12122613726Missense_MutationNAK1948E0.77
COADchr12122544206SilentnovelH202H0.16
COADchr12122603072Frame_Shift_InsNAL1647Tfs*120.3
COADchr12122620641Intronnovel0.38
COADchr12122597842SilentnovelR1489R0.14
COADchr12122587716Missense_MutationnovelG1246C0.09
COADchr12122591403Missense_Mutationrs566613986R1399C0.33
COADchr12122603153Missense_MutationnovelT1671A0.1
COADchr12122571076Frame_Shift_InsnovelT659Nfs*330.07
COADchr12122573262Nonsense_MutationNAE754*0.43
COADchr12122542100Missense_MutationNAN166Y0.46
COADchr12122546242Missense_MutationNAN246H0.19
COADchr12122585722Missense_MutationnovelQ1207H0.08
COADchr12122587801Missense_MutationNAF1274C0.15
COADchr12122591396SilentnovelL1396L0.21
COADchr12122601559Missense_MutationNAM1529I0.15
COADchr12122620432Intronnovel0.13
COADchr12122604881Missense_MutationNAE1727G0.32
COADchr12122605335Missense_Mutationrs529981688E1806K0.4
COADchr12122620514Missense_MutationNAV2062A0.32
COADchr12122568311Frame_Shift_DelNAL554Yfs*30.11
COADchr12122603073Frame_Shift_DelNAK1646Nfs*20.48
COADchr12122603073Frame_Shift_DelNAK1646Nfs*20.23
COADchr12122590724Missense_MutationNAD1373N0.2
COADchr12122587839Missense_MutationNAV1287M0.09
COADchr12122590641Missense_Mutationrs745930138A1345V0.31
COADchr12122602688Nonsense_MutationnovelL1591_P1592insS*N0.04
COADchr12122602690Missense_MutationnovelP1592H0.01
COADchr12122568278Missense_MutationnovelE541A0.06
COADchr12122609389Silentrs534116201P1834P0.03
COADchr12122603073Frame_Shift_DelnovelK1646Tfs*120.13
DLBCchr12122622545SilentnovelK2151K0.3
ESCAchr12122551504Missense_MutationnovelE393K0.22
ESCAchr12122551620Splice_SitenovelX399_splice0.08
ESCAchr12122597803SilentNAG1476G0.13
ESCAchr12122572975Missense_MutationnovelR686S0.09
GBMchr12122622535Missense_MutationnovelQ2148R0.07
GBMchr12122609383Splice_SitenovelX1833_splice0.32
GBMchr12122613651SilentnovelL1923L0.48
GBMchr12122582800SilentnovelA1026A0.35
GBMchr12122603029Missense_MutationnovelF1629L0.14
GBMchr12122610901Splice_Siters752265057X1874_splice0.34
GBMchr12122613674Missense_MutationnovelN1930K0.04
HNSCchr12122602836Silentrs760590719E1611E0.28
HNSCchr12122618395Nonsense_MutationnovelS2028*0.3
HNSCchr12122604619SilentnovelL1719L0.19
HNSCchr12122605308Missense_MutationnovelI1797V0.25
HNSCchr12122597893Silentrs764898553T1506T0.17
HNSCchr12122538422Missense_MutationnovelH112Y0.5
HNSCchr12122534732SilentnovelS66S0.15
HNSCchr12122610857Missense_MutationnovelY1860C0.31
HNSCchr12122618535Missense_MutationnovelA2047T0.27
HNSCchr12122605389SilentnovelL1824L0.47
HNSCchr12122585666Missense_MutationnovelE1189K0.16
HNSCchr12122613181Missense_MutationnovelD1898N0.16
HNSCchr12122576915SilentNAL869L0.41
HNSCchr12122569728SilentnovelL588L0.27
KIRCchr12122603155Silentrs757883690T1671T0.11
KIRCchr12122569711Missense_MutationNAM583L0.21
KIRCchr12122575822Missense_MutationnovelY837N0.32
KIRCchr12122579942Missense_MutationnovelV960A0.23
KIRCchr12122549848Missense_MutationNAQ357R0.27
KIRCchr12122551354Frame_Shift_InsnovelD375Lfs*140.04
KIRCchr12122551356In_Frame_InsnovelD375delinsEKKKHWEKMA0.02
KIRPchr12122549777SilentnovelL333L0.44
KIRPchr12122586741Frame_Shift_DelnovelC1239Afs*140.11
KIRPchr12122590650Frame_Shift_DelnovelC1349Sfs*90.38
KIRPchr12122580637Missense_MutationnovelM983I0.53
KIRPchr12122604615Nonsense_MutationnovelW1718*0.31
KIRPchr12122604616Missense_MutationnovelW1718C0.31
KIRPchr12122568367Missense_MutationnovelH571Y0.46
LAMLchr12122613738Nonsense_MutationnovelK1952*0.26
LAMLchr12122580609Missense_MutationnovelL974Q0.5
LGGchr12122549832Missense_MutationnovelV352I0.4
LGGchr12122562677Missense_MutationnovelA528T0.41
LGGchr12122582776SilentnovelQ1018Q0.37
LGGchr12122582827SilentnovelT1035T0.11
LIHCchr12122601552Missense_MutationNAY1527C0.13
LIHCchr12122621879Splice_SitenovelX2094_splice0.36
LIHCchr121226262683'UTRnovel0.13
LIHCchr12122570870Splice_SitenovelX621_splice0.25
LIHCchr12122573167Missense_MutationnovelR722P0.25
LIHCchr12122620447Intronnovel0.33
LIHCchr12122620448Intronnovel0.35
LIHCchr12122585715Missense_MutationNAE1205V0.44
LIHCchr12122571060Missense_MutationNAE651D0.07
LUADchr12122602695Missense_MutationNAH1594Y0.21
LUADchr12122620620Intronnovel0.38
LUADchr12122602646Missense_MutationnovelL1577F0.49
LUADchr12122582971SilentNAA1083A0.65
LUADchr12122620543Missense_Mutationrs377336279P2072S0.17
LUADchr12122585689Missense_MutationNAF1196L0.29
LUADchr12122597898Missense_MutationNAT1508K0.07
LUADchr12122569760Missense_MutationnovelK599T0.06
LUADchr12122602875SilentNAS1624S0.11
LUADchr12122557419Missense_MutationNAE436D0.34
LUADchr12122582714Missense_MutationnovelE998Q0.35
LUADchr12122582846Missense_MutationnovelE1042K0.22
LUADchr12122618514Missense_MutationNAD2040Y0.18
LUADchr12122605048Missense_MutationNAN1783H0.5
LUADchr12122587710Splice_SiteNAX1244_splice0.62
LUADchr12122590673Missense_MutationnovelD1356Y0.24
LUADchr12122603075Nonsense_MutationnovelK1645*0.21
LUADchr12122530077Missense_Mutationrs556183893I5T0.23
LUADchr12122562646Missense_MutationnovelR517S0.38
LUADchr12122604877Missense_Mutationrs772711216D1726Y0.3
LUADchr12122557649Missense_MutationnovelY483C0.47
LUADchr12122597840Missense_Mutationrs201757501R1489W0.6
LUADchr121225300405'UTRnovel0.32
LUADchr12122602722Missense_MutationNAN1603H0.17
LUSCchr12122615016Missense_MutationNAC1968Y0.26
LUSCchr12122618347Missense_MutationnovelP2012L0.23
LUSCchr12122569788SilentnovelV608V0.15
LUSCchr12122597873Nonsense_MutationnovelE1500*0.3
LUSCchr12122604590Missense_MutationNAF1710L0.23
LUSCchr12122534731Missense_MutationnovelS66L0.28
LUSCchr12122610837SilentnovelL1853L0.14
LUSCchr12122575558Missense_MutationnovelV800L0.38
LUSCchr12122551498Missense_MutationnovelL391V0.21
LUSCchr12122574293Silentrs768380870N765N0.35
LUSCchr12122569818SilentnovelE618E0.2
LUSCchr12122587709Splice_Siters753300288X1244_splice0.33
LUSCchr12122620629Intronnovel0.17
LUSCchr12122557455Missense_MutationNAQ448H0.27
LUSCchr12122557482Silentrs201683456D457D0.08
LUSCchr12122597923SilentnovelS1516S0.54
LUSCchr12122582883Missense_MutationnovelR1054K0.33
LUSCchr12122605374SilentnovelL1819L0.3
LUSCchr12122620603Missense_MutationnovelI2092V0.13
LUSCchr12122622497Missense_MutationnovelK2135N0.5
LUSCchr12122584436Missense_MutationnovelT1141S0.09
LUSCchr12122562697Splice_RegionNAF534F0.14
OVchr12122577749Frame_Shift_InsnovelA934Lfs*160.04
OVchr12122573210SilentNAI736I0.38
OVchr12122575800Frame_Shift_DelnovelK831Tfs*30.29
OVchr12122569685Missense_MutationnovelN574I0.07
OVchr12122530102Silentrs763877172T13T0.18
OVchr12122568272Missense_Mutationrs199501312W539L0.19
OVchr12122603218SilentNAI1692I0.38
OVchr12122557455Missense_MutationNAQ448H0.29
OVchr12122534731Nonsense_MutationnovelS66*0.1
OVchr12122573199Missense_MutationnovelI733V0.05
OVchr12122577764Frame_Shift_DelnovelQ939Gfs*170.35
PAADchr12122587814SilentnovelS1278S0.16
PAADchr12122597779Silentrs548835839T1468T0.22
PRADchr12122574378Missense_MutationnovelD794N0.26
PRADchr12122575896Missense_MutationnovelI861M0.43
READchr12122615502Missense_MutationNAI2002M0.05
READchr12122574324Nonsense_MutationNAE776*0.59
READchr12122613753Missense_Mutationrs759532010E1957K0.53
READchr12122622554Silentrs538519234A2154A0.53
READchr121226263943'UTRnovel0.67
READchr12122547928Missense_MutationnovelN316H0.1
SARCchr12122551465Missense_MutationnovelE380K0.23
SARCchr12122585644Silentrs546067080F1181F0.4
SARCchr12122575588Missense_Mutationrs151068294P810S0.22
SARCchr12122530123Silentrs370631854V20V0.3
SARCchr12122557475Missense_MutationnovelV455A0.11
SARCchr12122603073Frame_Shift_DelNAK1646Nfs*20.34
SKCMchr12122588765Missense_MutationNAK1316N0.46
SKCMchr12122613758SilentNAS1958S0.4
SKCMchr12122586712Frame_Shift_DelnovelY1229Cfs*170.23
SKCMchr12122575556Missense_MutationNAA799V0.56
SKCMchr12122594320SilentNAK1430K0.18
SKCMchr12122602874Missense_Mutationrs763188648S1624L0.11
SKCMchr12122582792Missense_Mutationrs760669670E1024K0.15
SKCMchr12122618346Missense_MutationNAP2012S0.14
SKCMchr12122549775Missense_MutationNAL333F0.25
SKCMchr12122584392SilentNAL1126L0.24
SKCMchr12122544178Missense_MutationNAS193F0.4
SKCMchr12122610838Silentrs190394641L1854L0.21
SKCMchr12122613213Missense_MutationNAK1908N0.5
SKCMchr12122618346Missense_MutationNAP2012S0.3
SKCMchr12122585754Missense_MutationNAS1218L0.22
SKCMchr12122571123SilentNAS672S0.18
SKCMchr12122604944Missense_MutationNAT1748R0.7
SKCMchr12122602695Missense_MutationNAH1594Y0.18
SKCMchr12122546219Missense_MutationNAS238C0.1
SKCMchr12122610819Splice_Regionnovel0.44
SKCMchr12122613677SilentnovelI1931I0.61
STADchr12122534689Missense_MutationNAA52V0.33
STADchr12122575577Missense_Mutationrs757801099A806V0.2
STADchr12122584969SilentnovelD1171D0.11
STADchr12122575573Missense_MutationNAY805H0.24
STADchr12122603176SilentNAL1678L0.24
STADchr121226262403'UTRrs7605039720.26
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.38
STADchr12122588716Missense_MutationNAF1300S0.5
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.38
STADchr12122568311Frame_Shift_DelNAL554Yfs*30.33
STADchr12122591437Missense_MutationNAR1410H0.33
STADchr12122613212Missense_MutationNAK1908T0.38
STADchr12122568328Missense_MutationnovelE558K0.31
STADchr12122615074SilentNAL1987L0.35
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.36
STADchr12122584449Splice_RegionNAP1145P0.47
STADchr12122603179SilentNAL1679L0.3
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.44
STADchr12122597773SilentNAI1466I0.12
STADchr12122568311Frame_Shift_DelNAL554Yfs*30.07
STADchr12122570894SilentNAL627L0.25
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.38
STADchr12122568311Frame_Shift_DelNAL554Yfs*30.3
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.42
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.22
STADchr12122568311Frame_Shift_DelNAL554Yfs*30.24
STADchr12122590611Frame_Shift_DelnovelN1336Vfs*40.03
STADchr12122620544Missense_Mutationrs370269719P2072L0.13
STADchr12122575635Missense_MutationNAM825I0.47
STADchr12122615055Missense_MutationNAG1981E0.18
STADchr12122603073Frame_Shift_DelNAK1646Nfs*20.25
TGCTchr12122557423Missense_MutationnovelL438V0.24
TGCTchr12122572936Splice_Siters779604603X674_splice0.31
TGCTchr12122622491Missense_MutationnovelI2133M0.1
UCECchr12122603073Frame_Shift_DelNAK1646Nfs*20.12
UCECchr12122594312Missense_MutationnovelT1428A0.14
UCECchr12122620576Missense_Mutationrs756158800P2083S0.31
UCECchr12122626227Silentnovel*2210*0.14
UCECchr12122620468Intronnovel0.36
UCECchr12122562639Missense_MutationnovelV515A0.3
UCECchr12122568365Missense_Mutationrs781762358R570Q0.09
UCECchr12122602737Missense_Mutationrs755131976L1608I0.44
UCECchr12122610842Missense_Mutationrs374343598S1855F0.27
UCECchr12122571088Missense_Mutationrs765751440E661K0.41
UCECchr12122602737Missense_Mutationrs755131976L1608I0.32
UCECchr12122622491SilentNAI2133I0.14
UCECchr12122546645Missense_MutationnovelD263N0.37
UCECchr12122582765Missense_MutationnovelL1015I0.33
UCECchr12122613226Missense_MutationnovelV1913M0.31
UCECchr12122620658Intronnovel0.4
UCECchr12122587767Missense_Mutationrs748027315Q1263E0.05
UCECchr12122602691Frame_Shift_DelnovelH1594Tfs*20.22
UCECchr12122602717Missense_MutationNAA1601V0.43
UCECchr12122609427Missense_Mutationrs202054994R1847Q0.47
UCECchr12122620291Intronnovel0.5
UCECchr12122620592Missense_MutationNAR2088I0.16
UCECchr12122585655Missense_MutationnovelK1185T0.51
UCECchr12122575557Silentrs765314103A799A0.41
UCECchr12122576899Missense_MutationnovelV864G0.51
UCECchr12122588746Missense_MutationnovelH1310R0.18
UCECchr12122597844Missense_Mutationrs746207263R1490Q0.47
UCECchr12122601550Missense_MutationnovelD1526E0.36
UCECchr12122561921Missense_MutationnovelL497F0.35
UCECchr12122582940Missense_MutationnovelR1073I0.36
UCECchr12122590690SilentnovelL1361L0.47
UCECchr12122539720Missense_MutationnovelQ137H0.13
UCECchr12122568277Missense_MutationnovelE541K0.2
UCECchr12122602737Missense_Mutationrs755131976L1608I0.23
UCECchr12122585735Missense_Mutationrs777382168V1212M0.26
UCECchr12122604879Splice_RegionNAD1726D0.42
UCECchr12122530187Frame_Shift_InsnovelA44Gfs*140.47
UCECchr12122549831SilentNAS351S0.46
UCECchr12122622502Missense_MutationNAE2137G0.44
UCECchr12122603165Missense_MutationnovelE1675K0.33
UCECchr12122577700Missense_MutationNAS917Y0.27
UCECchr12122579924Missense_MutationNAS954Y0.13
UCECchr12122621942Missense_Mutationrs771390477T2114M0.25
UCECchr12122603073Frame_Shift_DelNAK1646Nfs*20.48
UCECchr12122575577Missense_Mutationrs757801099A806V0.27
UCECchr12122624643Silentrs559434593C2187C0.25
UCECchr12122575853Missense_Mutationrs769739544R847Q0.26
UCECchr12122590688Missense_MutationNAL1361I0.46
UCECchr12122577031Splice_SitenovelX907_splice0.43
UCECchr12122585684Missense_MutationnovelD1195Y0.16
UCECchr12122588723SilentnovelE1302E0.21
UCECchr12122602846Nonsense_MutationnovelE1615*0.41
UCECchr12122620592Missense_MutationNAR2088I0.5
UCECchr12122575852Nonsense_Mutationrs745858002R847*0.43
UCECchr12122579948Missense_MutationnovelI962T0.18
UCECchr12122618535Missense_MutationnovelA2047T0.24
UCECchr12122605055Missense_MutationNAR1785I0.63
UCECchr12122580623Missense_Mutationrs201575472E979K0.46
UCECchr12122604634Silentrs770373434S1724S0.38
UCECchr12122534688Missense_MutationnovelA52T0.36
UCECchr12122568311Frame_Shift_DelNAL554Yfs*30.51
UCECchr12122575578SilentnovelA806A0.51
UCECchr12122597798Missense_MutationnovelA1475T0.52
UCECchr12122601544SilentnovelP1524P0.38
UCECchr12122597803SilentNAG1476G0.36
UCECchr12122539675Splice_SitenovelX123_splice0.56
UCECchr12122602581Missense_MutationnovelL1556M0.37
UCECchr12122604567Missense_MutationnovelS1702F0.37
UCECchr12122613657Missense_MutationnovelS1925P0.26
UCECchr12122569819Nonsense_MutationnovelG619*0.13
UCECchr12122603073Frame_Shift_DelNAK1646Nfs*20.44
UCECchr12122584360Missense_MutationNAD1116N0.37
UCECchr12122584970Missense_MutationNAD1172N0.45
UCECchr12122577779Missense_MutationNAD943E0.5
UCECchr12122613738Frame_Shift_DelnovelN1953Tfs*90.4
UCECchr12122530122Missense_MutationNAV20A0.18
UCECchr12122584341SilentnovelK1109K0.06
UCECchr12122587713Missense_MutationNAD1245Y0.37
UCECchr12122620665Intronnovel0.14
UCECchr12122588727Missense_MutationnovelT1304A0.41
UCECchr12122605326Nonsense_MutationnovelE1803*0.21
UCECchr121226262633'UTRnovel0.5
UCECchr12122551321Splice_RegionnovelD363D0.15
UCECchr12122582971SilentNAA1083A0.28
UCECchr12122621942Missense_Mutationrs771390477T2114M0.32
UCECchr12122624623Missense_MutationnovelT2181A0.31
UCECchr12122572995Missense_Mutationrs772245787R693Q0.3
UCECchr12122594280Missense_Mutationrs745665785S1417Y0.07
UCECchr12122621944Missense_MutationnovelG2115S0.17
UCECchr12122618362Missense_Mutationrs748143502A2017V0.4
UCECchr12122622553Missense_Mutationrs760448774A2154V0.54
UCECchr12122551627Silentrs370532690S401S0.41
UCECchr12122587798Missense_MutationnovelR1273I0.26
UCECchr12122530163Missense_MutationnovelD34Y0.38
UCECchr12122574373Missense_MutationnovelD792G0.42
UCECchr12122603073Frame_Shift_DelNAK1646Nfs*20.46
UCECchr12122603073Frame_Shift_DelNAK1646Nfs*20.36
UCECchr12122546216Missense_MutationNAS237Y0.18
UCECchr12122571060Missense_MutationNAE651D0.4
UCECchr12122539706Missense_Mutationrs775527571R133W0.19
UCECchr12122549810SilentnovelL344L0.14
UCECchr12122602838Missense_MutationnovelL1612P0.18
UCECchr12122547528Splice_RegionnovelT310T0.54
UCECchr12122597843Missense_Mutationrs369923772R1490W0.13
UCECchr12122575557Silentrs765314103A799A0.38
UCECchr12122603073Frame_Shift_DelNAK1646Nfs*20.2
UCECchr12122568311Frame_Shift_DelNAL554Yfs*30.24
UCECchr12122604962Missense_MutationNAA1754V0.2
UCECchr12122542121Missense_MutationNAQ173K0.46
UCECchr12122571060Missense_MutationNAE651D0.46
UCECchr12122586710Missense_MutationNAR1228I0.43
UCECchr12122590619Missense_Mutationrs752336311R1338C0.4
UCECchr12122620291Intronnovel0.73
UCECchr12122577001Missense_MutationnovelR898I0.03
UCECchr12122603073Frame_Shift_DelNAK1646Nfs*20.47
UCECchr12122568310Frame_Shift_InsnovelL554Ffs*230.47
UCECchr12122557634Missense_Mutationrs778452685A478D0.12
UCECchr12122568285Silentrs374104707L543L0.29
UCECchr12122569708Missense_MutationnovelK582Q0.18
UCECchr12122605020SilentnovelI1773I0.22
UCECchr12122610828Silentrs370414071Q1850Q0.14
UCECchr12122615047SilentnovelL1978L0.2
UCECchr12122575553Missense_MutationnovelD798V0.38
UCECchr12122621894Missense_MutationnovelS2098F0.43
UCECchr12122597745Missense_MutationNAD1457G0.29
UCECchr12122584341SilentnovelK1109K0.45
UCECchr12122584893Frame_Shift_InsnovelL1148Ffs*90.43
UCECchr12122577684Missense_MutationnovelL912F0.34
UCECchr12122587875Splice_SitenovelX1298_splice0.41
UCECchr12122620466Intronnovel0.51
UCSchr12122582793Missense_MutationnovelE1024G0.41
UCSchr12122602737Missense_Mutationrs755131976L1608I0.28

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BRCADEL0.16116.3933e-07
CHOLDEL0.19440.067545
HNSCDEL0.05560.22646
LIHCDEL0.11892.3723e-05
LUADDEL0.14530.0059643
LUSCDEL0.10980.038823
PAADDEL0.16850.0030251
PRADAMP0.04270.016187
SKCMDEL0.18530.00079981
UCECDEL0.09280.00053229
UCSDEL0.32140.033261

Survival Analysis
CancerP-value Q-value
THYM0.0021

Kaplan-Meier Survival Analysis

KIRC0.0001

Kaplan-Meier Survival Analysis

STAD0.019

Kaplan-Meier Survival Analysis

SARC0.0015

Kaplan-Meier Survival Analysis

MESO0.00022

Kaplan-Meier Survival Analysis

ACC0.00012

Kaplan-Meier Survival Analysis

UCS0.017

Kaplan-Meier Survival Analysis

PRAD0.03

Kaplan-Meier Survival Analysis

LUSC0.03

Kaplan-Meier Survival Analysis

KIRP0.0015

Kaplan-Meier Survival Analysis

PAAD0.045

Kaplan-Meier Survival Analysis

PCPG0.013

Kaplan-Meier Survival Analysis

CESC0.009

Kaplan-Meier Survival Analysis

READ0.035

Kaplan-Meier Survival Analysis

KICH0.0009

Kaplan-Meier Survival Analysis

UCEC0.0089

Kaplan-Meier Survival Analysis

LIHC0.00013

Kaplan-Meier Survival Analysis

LUAD0.01

Kaplan-Meier Survival Analysis

UVM0.028

Kaplan-Meier Survival Analysis

OV0.0092

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000184445 (Gene tree)
Gene ID
9735
Gene Symbol
KNTC1
Alias
KIAA0166|ROD
Full Name
kinetochore associated 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
100,066 bases
Position
chr12:122,527,246-122,627,311
Accession
17255
RBP type
non-canonical RBP
Summary
This gene encodes a protein that is one of many involved in mechanisms to ensure proper chromosome segregation during cell division. Experimental evidence indicated that the encoded protein functioned in a similar manner to that of the Drosophila rough deal protein. [provided by RefSeq, Jul 2008]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000333479KNTC1-2016975XM_006719706ENSP000003282362209 (aa)XP_006719769P50748
ENST00000377192KNTC1-2021519--- (aa)--
ENST00000450485KNTC1-2053655-ENSP000003979921134 (aa)-E7ES84
ENST00000546125KNTC1-215624-ENSP00000439119208 (aa)-H0YFL5
ENST00000541427KNTC1-211641--- (aa)--
ENST00000423927KNTC1-2031250-ENSP00000397140104 (aa)-J3KQF2
ENST00000539013KNTC1-210615--- (aa)--
ENST00000536625KNTC1-2091178--- (aa)--
ENST00000436959KNTC1-2042412-ENSP00000408760130 (aa)-F5H5V0
ENST00000534995KNTC1-2061065-ENSP00000437344130 (aa)-F5H5V0
ENST00000541466KNTC1-212616--- (aa)--
ENST00000542727KNTC1-213203--- (aa)--
ENST00000545065KNTC1-214782--- (aa)--
ENST00000535410KNTC1-208331--- (aa)--
ENST00000535186KNTC1-207553--- (aa)--
Gene Model
Click here to download ENSG00000184445's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000184445Platelet Function Tests1.1536500E-005-
ENSG00000184445Platelet Function Tests1.5662700E-005-
ENSG00000184445Adiponectin4E-622479202
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000184445rs431954712122594488GBody mass index28892062[0.01-0.022] kg/m2 increase0.016EFO_0004340
ENSG00000184445rs1073492412122534347TEducational attainment (MTAG)30038396[0.0073-0.0131] unit decrease0.0102EFO_0004784
ENSG00000184445rs1073492412122534347THighest math class taken (MTAG)30038396[0.0079-0.0153] unit decrease0.0116EFO_0004875
ENSG00000184445rs3611746412122585671ACognitive performance (MTAG)30038396[0.02-0.043] unit increase0.0314EFO_0008354
ENSG00000184445rs14773026812122539929THand grip strength29691431[0.002-0.004] unit increase0.003EFO_0006941
ENSG00000184445rs431954712122594488ABody mass index30108127[NR] unit decrease0.015EFO_0004340
ENSG00000184445rs14773026812122539929?Body mass index30595370EFO_0004340
ENSG00000184445rs648911112122566471GBody fat distribution (leg fat ratio)30664634NR unit decrease (replication)0.01068EFO_0004341
ENSG00000184445rs648911112122566471GBody fat distribution (trunk fat ratio)30664634NR unit increase (replication)0.01512EFO_0004341
ENSG00000184445rs648911112122566471GBody fat distribution (leg fat ratio)30664634NR unit decrease (replication)0.01874EFO_0004341
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000184445's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000777condensed chromosome kinetochore-IEAComponent
GO:0000922spindle pole11146660.IDAComponent
GO:0005515protein binding11146660.12686595.19468067.20462495.IPIFunction
GO:0005634nucleus11146660.NASComponent
GO:0005828kinetochore microtubule11146660.IDAComponent
GO:0005829cytosol-IDAComponent
GO:0005829cytosol-TASComponent
GO:0005886plasma membrane-IDAComponent
GO:0007093mitotic cell cycle checkpoint11146660.IDAProcess
GO:0007096regulation of exit from mitosis11146660.NASProcess
GO:0015629actin cytoskeleton-IDAComponent
GO:0051301cell division-IEAProcess
GO:0065003protein-containing complex assembly11146660.NASProcess
GO:1990423RZZ complex20462495.IDAComponent
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