EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1952881365Missense_MutationnovelF254S0.11
BLCAchr1952881325SilentnovelH267H0.25
BLCAchr1952881112SilentNAF338F0.53
BLCAchr1952888152Silentrs755239993E39E0.18
BLCAchr1952888166Missense_MutationnovelD35H0.08
BLCAchr1952881129Missense_MutationnovelE333K0.24zf-C2H2
BLCAchr1952881148SilentNAE326E0.35
BLCAchr1952881286Missense_MutationnovelK280N0.23
BLCAchr1952880629SilentNAC499C0.16
BLCAchr1952880688SilentnovelL480L0.08
BLCAchr1952881616Missense_MutationNAF170L0.07
BLCAchr1952880830SilentnovelR432R0.42
BLCAchr1952881739Silentrs776479114R129R0.23
BRCAchr1952881555Missense_Mutationrs770557958C191R0.17
BRCAchr1952881310SilentNAP272P0.18
BRCAchr1952880816Missense_MutationNAG437V0.28
BRCAchr1952881869Missense_MutationNAC86S0.17
CESCchr1952880680SilentnovelS482S0.28
CESCchr1952880609Nonsense_MutationnovelS506*0.37
CESCchr1952888223Nonsense_MutationnovelE16*0.64
CESCchr1952880855Missense_Mutationrs765248150R424H0.36
CESCchr1952881600Missense_MutationNAL176F0.17
CESCchr19528795353'UTRnovel0.67
CHOLchr19528902885'UTRnovel0.48
COADchr1952881559Nonsense_MutationNAY189*0.23
COADchr1952880837Missense_MutationNAR430I0.56
COADchr1952881027Missense_MutationNAR367W0.39
COADchr1952881754SilentnovelD124D0.09
COADchr1952881881Missense_Mutationrs138794752I82T0.28
COADchr1952881404Missense_MutationNAG241E0.48
COADchr1952881378Missense_MutationNAC250G0.32
COADchr19528805313'UTRnovel0.11
COADchr1952880886Missense_Mutationrs149561496E414K0.2
COADchr1952890241Splice_RegionnovelQ5Q0.41
COADchr19528778343'UTRnovel0.6
COADchr1952881400Missense_MutationNAE242D0.16
COADchr1952881680Missense_Mutationrs200745884R149Q0.17
COADchr1952881895Missense_MutationnovelQ77H0.11
COADchr1952880643Missense_MutationNAN495D0.32
COADchr1952880744Missense_Mutationrs758231454R461K0.16
COADchr1952880991Missense_MutationnovelH379Y0.04
COADchr1952881032Missense_MutationNAA365V0.31
COADchr1952881278Missense_MutationnovelA283V0.3
ESCAchr1952881773Missense_MutationnovelK118T0.38
ESCAchr1952881855Missense_MutationnovelE91K0.3
ESCAchr1952881973SilentnovelS51S0.28
GBMchr1952881543Missense_Mutationrs755970222D195N0.36
GBMchr1952881212Missense_MutationnovelE305G0.07
HNSCchr1952881901SilentNAQ75Q0.06
HNSCchr1952880781Missense_MutationnovelA449T0.09
HNSCchr1952881278In_Frame_DelnovelK280_A283delinsN0.21
HNSCchr1952881092Missense_MutationnovelE345V0.71zf-C2H2
HNSCchr1952881415Missense_MutationnovelR237S0.12
HNSCchr1952880924Missense_Mutationrs748325945A401V0.35
HNSCchr1952880654Missense_MutationNAP491L0.08
KIRCchr19528805863'UTRnovel0.25
KIRCchr1952881768Missense_MutationNAT120A0.14
KIRCchr1952881769Missense_MutationNAL119F0.14
KIRCchr1952881471Missense_Mutationrs780919455C219G0.34
KIRPchr1952881689Missense_MutationNAL146S0.43
LGGchr1952880942Frame_Shift_DelnovelS395Ifs*860.27
LIHCchr1952881031SilentNAA365A0.41
LIHCchr1952881085Missense_MutationnovelH347Q0.27zf-C2H2
LIHCchr1952881032Missense_MutationNAA365V0.05
LUADchr1952881927Missense_MutationnovelE67K0.04
LUADchr1952888132Missense_MutationNAS46F0.14
LUADchr1952880708Missense_MutationnovelQ473L0.69
LUADchr1952880888Missense_MutationnovelY413C0.4
LUADchr1952880904Missense_MutationnovelT408A0.2
LUADchr1952881597Missense_MutationNAE177Q0.11
LUADchr1952888206SilentnovelE21E0.22
LUADchr1952880762Missense_MutationNAH455P0.21
LUADchr1952880679Missense_MutationnovelL483I0.18
LUSCchr19528805633'UTRnovel0.11
LUSCchr1952881938Missense_MutationNAQ63P0.4
LUSCchr1952880805Missense_MutationnovelH441Y0.2
LUSCchr1952881028SilentnovelF366F0.18
LUSCchr1952881974Missense_MutationnovelS51C0.1
LUSCchr1952880953SilentNAG391G0.11
LUSCchr1952880988Missense_MutationNAT380P0.4
LUSCchr1952880723Missense_MutationNAS468Y0.1
LUSCchr1952881233Missense_MutationnovelE298V0.07
LUSCchr1952888176SilentnovelT31T0.16
LUSCchr1952880827Missense_MutationNAR433S0.24
LUSCchr1952881437Frame_Shift_InsnovelA230Gfs*80.43
LUSCchr1952881870Missense_MutationNAC86S0.39
LUSCchr1952881936Missense_MutationNAG64S0.28
LUSCchr1952880705Missense_MutationNAC474F0.41
PAADchr1952881495Missense_MutationnovelH211Y0.13
PAADchr1952881899Missense_MutationnovelR76K0.21
READchr1952880978Missense_MutationnovelR383I0.05
READchr1952880996Missense_MutationnovelR377I0.37
READchr1952881568Missense_MutationNAE186D0.47
SKCMchr1952880655Missense_MutationNAP491S0.31
SKCMchr1952881159Missense_MutationNAH323Y0.35
SKCMchr1952881881Missense_Mutationrs138794752I82T0.41
SKCMchr19528804763'UTRnovel0.31
SKCMchr1952881663Missense_MutationNAH155Y0.24
SKCMchr1952888132Missense_MutationNAS46F0.47
SKCMchr1952881861Missense_MutationnovelE89K0.32
SKCMchr19528740633'Flankrs7570750570.14
SKCMchr1952881381Missense_MutationNAE249Q0.47
SKCMchr1952880889Missense_Mutationrs145022961Y413H0.5
SKCMchr1952880655Missense_MutationNAP491S0.36
SKCMchr1952880655Missense_MutationNAP491S0.41
SKCMchr1952881521Missense_MutationnovelS202L0.34
SKCMchr1952880654Missense_MutationNAP491L0.15
STADchr1952880891Missense_MutationnovelL412R0.22
STADchr1952881823Missense_MutationnovelW101C0.18
STADchr1952881826SilentNAQ100Q0.21
STADchr1952881308Missense_MutationnovelY273C0.1
STADchr1952880777Missense_MutationNAF450S0.1
STADchr1952881253Missense_MutationNAH291Q0.11
STADchr1952881014Missense_Mutationrs770340803R371H0.29
STADchr1952880968SilentNAT386T0.17
STADchr1952881107Missense_Mutationrs752009361R340H0.61zf-C2H2
STADchr1952880855Missense_Mutationrs765248150R424H0.21
UCECchr19528804393'UTRnovel0.48
UCECchr19528740303'Flanknovel0.39
UCECchr1952881771Missense_MutationnovelL119V0.31
UCECchr1952881124Silentrs756372350C334C0.5
UCECchr1952881188Missense_Mutationrs778986595R313Q0.44
UCECchr1952880606Missense_MutationnovelS507I0.48
UCECchr19528794773'UTRnovel0.38
UCECchr1952881296Missense_MutationnovelE277G0.46
UCECchr1952880866Missense_MutationNAK420N0.45
UCECchr1952881374Missense_MutationNAG251D0.16
UCECchr1952881544Silentrs777480191C194C0.29
UCECchr1952881681Nonsense_MutationNAR149*0.09
UCECchr1952881855Missense_MutationNAE91Q0.39
UCECchr1952888164Silentrs770988550D35D0.18
UCECchr1952881152Missense_MutationnovelG325V0.48
UCECchr1952880606Missense_MutationnovelS507N0.4
UCECchr1952880887Silentrs755709205Y413Y0.31
UCECchr1952881239Missense_MutationNAT296I0.37
UCECchr1952881777Missense_MutationnovelK117Q0.17
UCECchr1952881785Missense_MutationNAT114I0.37
UCECchr1952881666Missense_MutationnovelI154F0.24
UCECchr1952881080Missense_MutationnovelR349M0.27
UCECchr1952881221Missense_MutationnovelK302T0.32
UCECchr19528902835'UTRnovel0.4
UCECchr19528804853'UTRnovel0.3
UCECchr1952881668Missense_MutationnovelR153K0.36
UCECchr19528802863'UTRnovel1
UCECchr19528740683'Flanknovel0.25
UCECchr1952881305Missense_MutationNAK274T0.24
UCECchr19528804423'UTRnovel0.43
UCECchr1952888176SilentnovelT31T0.09
UCECchr1952881224Nonsense_MutationnovelY301Sfs*40.09
UCECchr1952881772Frame_Shift_InsNAL119Vfs*30.26
UCECchr19528740303'Flanknovel0.35
UCECchr1952881976In_Frame_InsnovelS50_S51insFLQKPI0.13
UCECchr1952881179Missense_MutationnovelL316R0.21
UCECchr1952881740Missense_MutationnovelR129K0.17
UCECchr1952880912Missense_MutationnovelK405T0.38
UCECchr19528804993'UTRnovel0.14
UCECchr1952881374Missense_MutationNAG251D0.34

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCAAMP0.31370.013691
CESCDEL0.0780.027508
KIRPDEL0.04860.054726
PAADDEL0.07610.035089
READDEL0.0970.23023
TGCTDEL0.28670.0046229
UCSDEL0.14290.12448

Survival Analysis
CancerP-value Q-value
KIRC0.0012

Kaplan-Meier Survival Analysis

SARC0.016

Kaplan-Meier Survival Analysis

PRAD0.0087

Kaplan-Meier Survival Analysis

LUSC0.035

Kaplan-Meier Survival Analysis

KIRP0.019

Kaplan-Meier Survival Analysis

BLCA0.0033

Kaplan-Meier Survival Analysis

LAML0.028

Kaplan-Meier Survival Analysis

KICH0.034

Kaplan-Meier Survival Analysis

GBM0.036

Kaplan-Meier Survival Analysis

LIHC0.0024

Kaplan-Meier Survival Analysis

LGG0.00011

Kaplan-Meier Survival Analysis

OV0.0039

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • GWAS
  • PPI
  • Orthologs
Description
Ensembl ID
ENSG00000182986 (Gene tree)
Gene ID
162967
Gene Symbol
ZNF320
Alias
ZFPL|DKFZp686G16228
Full Name
zinc finger protein 320
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
33,904 bases
Position
chr19:52,863,790-52,897,693
Accession
13842
RBP type
canonical RBP
Summary
ZNF320 encodes a Kruppel-like zinc finger protein. Members of this protein family are involved in activation or repression of transcription.[supplied by OMIM, Jul 2002]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000473091zf-C2H2PF00096.267.3e-59111
ENSP00000473091zf-C2H2PF00096.267.3e-59211
ENSP00000473091zf-C2H2PF00096.267.3e-59311
ENSP00000473091zf-C2H2PF00096.267.3e-59411
ENSP00000473091zf-C2H2PF00096.267.3e-59511
ENSP00000473091zf-C2H2PF00096.267.3e-59611
ENSP00000473091zf-C2H2PF00096.267.3e-59711
ENSP00000473091zf-C2H2PF00096.267.3e-59811
ENSP00000473091zf-C2H2PF00096.267.3e-59911
ENSP00000473091zf-C2H2PF00096.267.3e-591011
ENSP00000473091zf-C2H2PF00096.267.3e-591111
ENSP00000473091zf-metPF12874.74.1e-1412
ENSP00000473091zf-metPF12874.74.1e-1422
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000593618ZNF320-201598-ENSP00000472651123 (aa)-M0R2L4
ENST00000594741ZNF320-202590-ENSP0000047040386 (aa)-M0QZA2
ENST00000597909ZNF320-210754--- (aa)--
ENST00000595202ZNF320-203531--- (aa)--
ENST00000597091ZNF320-206658-ENSP00000468995155 (aa)-M0QX96
ENST00000596215ZNF320-205508--- (aa)--
ENST00000595635ZNF320-2046448-ENSP00000473091509 (aa)-A2RRD8
ENST00000597265ZNF320-208583-ENSP0000047193857 (aa)-M0R1K6
ENST00000597111ZNF320-207552-ENSP0000047154825 (aa)-M0R0Z8
ENST00000598199ZNF320-211502--- (aa)--
ENST00000601334ZNF320-213558--- (aa)--
ENST00000597856ZNF320-209582--- (aa)--
ENST00000600930ZNF320-212720--- (aa)--
Gene Model
Click here to download ENSG00000182986's gene model file
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000182986rs65097011952880932?Psychosis in Alzheimer's disease22005930[NR]1.4084507EFO_0000249|EFO_0005940
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000182986's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000182986ZNF32010098.246ENSCATG00000042172-10090.177Cercocebus_atys
ENSG00000182986ZNF3209995.050ENSCSAG00000001956-10095.050Chlorocebus_sabaeus
ENSG00000182986ZNF32010096.491ENSCANG00000031077-10094.892Colobus_angolensis_palliatus
ENSG00000182986ZNF32010098.821ENSGGOG00000014972-10098.821Gorilla_gorilla
ENSG00000182986ZNF32010098.246ENSMFAG00000005779-9990.119Macaca_fascicularis
ENSG00000182986ZNF32010098.246ENSMMUG00000012085-10090.177Macaca_mulatta
ENSG00000182986ZNF3209389.429ENSMNEG00000039739-10089.429Macaca_nemestrina
ENSG00000182986ZNF3209189.154ENSMLEG00000011375-9989.154Mandrillus_leucophaeus
ENSG00000182986ZNF3209996.634ENSNLEG00000006053-9996.634Nomascus_leucogenys
ENSG00000182986ZNF32010098.821ENSPPAG00000029412-10098.821Pan_paniscus
ENSG00000182986ZNF32010099.018ENSPTRG00000011427ZNF32010099.018Pan_troglodytes
ENSG00000182986ZNF32010096.610ENSPANG00000031583-10089.628Papio_anubis
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