EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr1	203865058	Missense_Mutation	novel	M54I	0.49
BLCA	chr1	203863690	Missense_Mutation	novel	E37K	0.3	LSM
BLCA	chr1	203861732	Intron	novel		0.24
BLCA	chr1	203870013	3'UTR	novel		0.17
BLCA	chr1	203861622	5'UTR	novel		0.39
BLCA	chr1	203869986	3'UTR	novel		0.25
BRCA	chr1	203870033	3'UTR	rs141330314		0.49
BRCA	chr1	203870151	3'UTR	novel		0.18
BRCA	chr1	203870153	3'UTR	novel		0.18
COAD	chr1	203863705	Missense_Mutation	rs771072513	R42W	0.42	LSM
COAD	chr1	203862219	Missense_Mutation	NA	Q26H	0.3	LSM
GBM	chr1	203861731	Intron	novel		0.06
HNSC	chr1	203870010	3'UTR	novel		0.5
HNSC	chr1	203865104	Missense_Mutation	novel	S70T	0.15
KIRC	chr1	203865094	Frame_Shift_Ins	novel	*K67Sfs17**	0.04
KIRP	chr1	203863706	Missense_Mutation	NA	R42Q	0.35	LSM
KIRP	chr1	203863707	Silent	NA	R42R	0.36
LGG	chr1	203863670	Missense_Mutation	NA	R30Q	0.83	LSM
LUAD	chr1	203861603	5'Flank	novel		0.32
LUSC	chr1	203861735	Intron	novel		0.39
PAAD	chr1	203862214	Missense_Mutation	novel	L25I	0.03	LSM
PAAD	chr1	203869876	Splice_Site	novel	X75_splice	0.15
PRAD	chr1	203869874	Splice_Region	novel		0.3
READ	chr1	203869944	3'UTR	novel		0.39
SARC	chr1	203870095	3'UTR	novel		0.54
SARC	chr1	203861713	Missense_Mutation	novel	I18M	0.76	LSM
SARC	chr1	203870114	3'UTR	novel		0.29
SKCM	chr1	203861606	5'Flank	novel		0.65
SKCM	chr1	203863673	Missense_Mutation	NA	I31T	0.61	LSM
SKCM	chr1	203861606	5'Flank	novel		0.24
STAD	chr1	203861694	Missense_Mutation	NA	K12T	0.06	LSM
UCEC	chr1	203862220	Missense_Mutation	NA	N27H	0.33	LSM
UCEC	chr1	203861743	Intron	novel		0.36
UCEC	chr1	203869989	3'UTR	novel		0.04
UCEC	chr1	203870050	3'UTR	novel		0.43
UCEC	chr1	203861642	5'UTR	novel		0.42
UCEC	chr1	203869880	Missense_Mutation	novel	R76Q	0.2
UCEC	chr1	203869875	Splice_Site	novel	X75_splice	0.21
UCEC	chr1	203861616	5'UTR	novel		0.33
UCEC	chr1	203870119	3'UTR	novel		0.24
UCEC	chr1	203870084	3'UTR	novel		0.3
UCEC	chr1	203870151	3'UTR	novel		0.22
UCEC	chr1	203865043	Splice_Region	novel	G49G	0.17
UCEC	chr1	203863705	Missense_Mutation	rs771072513	R42W	0.28	LSM
UCEC	chr1	203869899	Missense_Mutation	novel	D82E	0.36
UCEC	chr1	203869940	3'UTR	novel		0.42

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
BLCA	DEL	0.0956	0.033566
DLBC	DEL	0.0417	0.0017831
KIRC	AMP	0.0871	0.059566
READ	AMP	0.2788	0.14328
TGCT	AMP	0.3467	0.088103
THCA	AMP	0.0481	0.075436

Survival Analysis

Cancer	P-value	Q-value
SARC	0.0051	Kaplan-Meier Survival Analysis
MESO	0.033	Kaplan-Meier Survival Analysis
ACC	0.00017	Kaplan-Meier Survival Analysis
HNSC	0.023	Kaplan-Meier Survival Analysis
ESCA	0.0023	Kaplan-Meier Survival Analysis
TGCT	0.024	Kaplan-Meier Survival Analysis
KIRP	0.0043	Kaplan-Meier Survival Analysis
PAAD	0.019	Kaplan-Meier Survival Analysis
KICH	0.039	Kaplan-Meier Survival Analysis
UCEC	0.026	Kaplan-Meier Survival Analysis
LIHC	0.0036	Kaplan-Meier Survival Analysis
DLBC	0.015	Kaplan-Meier Survival Analysis
LGG	0.014	Kaplan-Meier Survival Analysis
LUAD	0.0027	Kaplan-Meier Survival Analysis
OV	0.00048	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

Literatures

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000182004 (Gene tree)
Gene ID: 6635
Gene Symbol: SNRPE
Alias: Sm-E
Full Name: small nuclear ribonucleoprotein polypeptide E
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 9,568 bases
Position: chr1:203,861,585-203,871,152
Accession: 11161
RBP type: canonical RBP
Summary: The protein encoded by this gene is a core component of U small nuclear ribonucleoproteins, which are key components of the pre-mRNA processing spliceosome. The encoded protein plays a role in the 3' end processing of histone transcripts. This protein is one of the targets in the autoimmune disease systemic lupus erythematosus, and mutations in this gene have been associated with hypotrichosis. Several pseudogenes of this gene have been identified. [provided by RefSeq, Jun 2016]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000400591	LSM	PF01423.22	4.5e-17	1	1
ENSP00000356176	LSM	PF01423.22	9.7e-15	1	1

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
27417296	Structure-function analysis and genetic interactions of the SmG, SmE, and SmF subunits of the yeast Sm protein ring.	RNA	2016 Sep	Schwer B	doi: 10.1261/rna.057448.116

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000475035	SNRPE-205	532	-	-	- (aa)	-	-
ENST00000414487	SNRPE-202	942	-	ENSP00000400591	92 (aa)	-	P62304
ENST00000367208	SNRPE-201	355	-	ENSP00000356176	52 (aa)	-	A6NHK2
ENST00000469451	SNRPE-203	248	-	-	- (aa)	-	-
ENST00000470492	SNRPE-204	478	NR_130746	-	- (aa)	-	-
ENST00000483099	SNRPE-206	967	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000182004's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000182004's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000182004	SNRPE	88	39.583	ENSG00000106355	LSM5	77	39.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000182004	SNRPE	100	95.652	ENSAPOG00000024096	snrpe	100	95.652	Acanthochromis_polyacanthus
ENSG00000182004	SNRPE	100	97.849	ENSAMEG00000000882	SNRPE	100	97.849	Ailuropoda_melanoleuca
ENSG00000182004	SNRPE	85	90.909	ENSACIG00000019570	snrpe	100	72.826	Amphilophus_citrinellus
ENSG00000182004	SNRPE	100	95.652	ENSAOCG00000023377	snrpe	100	95.652	Amphiprion_ocellaris
ENSG00000182004	SNRPE	100	95.652	ENSAPEG00000015525	snrpe	100	95.652	Amphiprion_percula
ENSG00000182004	SNRPE	100	95.652	ENSATEG00000005274	snrpe	100	95.652	Anabas_testudineus
ENSG00000182004	SNRPE	100	95.652	ENSATEG00000005597	-	100	95.652	Anabas_testudineus
ENSG00000182004	SNRPE	100	100.000	ENSACAG00000010067	SNRPE	100	100.000	Anolis_carolinensis
ENSG00000182004	SNRPE	98	92.157	ENSANAG00000023411	-	92	73.626	Aotus_nancymaae
ENSG00000182004	SNRPE	100	100.000	ENSANAG00000036379	SNRPE	100	100.000	Aotus_nancymaae
ENSG00000182004	SNRPE	85	90.909	ENSACLG00000024766	snrpe	100	72.826	Astatotilapia_calliptera
ENSG00000182004	SNRPE	100	94.565	ENSAMXG00000043656	SNRPE	100	94.565	Astyanax_mexicanus
ENSG00000182004	SNRPE	100	94.565	ENSAMXG00000042813	-	100	94.565	Astyanax_mexicanus
ENSG00000182004	SNRPE	100	95.652	ENSBTAG00000030305	-	100	95.652	Bos_taurus
ENSG00000182004	SNRPE	100	92.308	ENSBTAG00000032198	-	100	89.130	Bos_taurus
ENSG00000182004	SNRPE	90	95.745	ENSBTAG00000054792	-	100	95.745	Bos_taurus
ENSG00000182004	SNRPE	100	96.154	ENSBTAG00000039066	-	100	96.154	Bos_taurus
ENSG00000182004	SNRPE	96	95.455	ENSBTAG00000049347	-	92	95.455	Bos_taurus
ENSG00000182004	SNRPE	100	90.385	ENSBTAG00000008426	-	100	90.385	Bos_taurus
ENSG00000182004	SNRPE	83	98.684	ENSBTAG00000050130	-	90	98.684	Bos_taurus
ENSG00000182004	SNRPE	96	62.000	WBGene00004919	snr-6	92	66.265	Caenorhabditis_elegans
ENSG00000182004	SNRPE	100	100.000	ENSCJAG00000022878	-	100	97.826	Callithrix_jacchus
ENSG00000182004	SNRPE	100	100.000	ENSCJAG00000046841	SNRPE	100	100.000	Callithrix_jacchus
ENSG00000182004	SNRPE	100	94.231	ENSCAFG00000013727	-	100	92.391	Canis_familiaris
ENSG00000182004	SNRPE	100	88.043	ENSCAFG00000017806	-	100	88.043	Canis_familiaris
ENSG00000182004	SNRPE	100	96.739	ENSCAFG00000002085	-	100	96.739	Canis_familiaris
ENSG00000182004	SNRPE	100	88.043	ENSCAFG00020011362	-	100	88.043	Canis_lupus_dingo
ENSG00000182004	SNRPE	100	100.000	ENSCAFG00020007342	-	100	82.609	Canis_lupus_dingo
ENSG00000182004	SNRPE	100	98.077	ENSCAFG00020022987	-	100	98.077	Canis_lupus_dingo
ENSG00000182004	SNRPE	100	92.308	ENSCAFG00020007518	-	100	92.308	Canis_lupus_dingo
ENSG00000182004	SNRPE	83	98.684	ENSCAFG00020006733	-	83	98.684	Canis_lupus_dingo
ENSG00000182004	SNRPE	100	61.538	ENSCHIG00000023516	-	100	70.886	Capra_hircus
ENSG00000182004	SNRPE	100	92.308	ENSCHIG00000004218	-	100	90.217	Capra_hircus
ENSG00000182004	SNRPE	100	100.000	ENSCHIG00000024013	-	100	100.000	Capra_hircus
ENSG00000182004	SNRPE	100	100.000	ENSCHIG00000004531	-	100	98.913	Capra_hircus
ENSG00000182004	SNRPE	100	82.692	ENSCHIG00000009858	-	100	82.692	Capra_hircus
ENSG00000182004	SNRPE	100	94.231	ENSCHIG00000013740	-	100	96.203	Capra_hircus
ENSG00000182004	SNRPE	100	100.000	ENSTSYG00000029919	-	100	100.000	Carlito_syrichta
ENSG00000182004	SNRPE	98	96.078	ENSTSYG00000031884	-	100	93.478	Carlito_syrichta
ENSG00000182004	SNRPE	100	90.385	ENSCAPG00000015503	-	94	86.813	Cavia_aperea
ENSG00000182004	SNRPE	100	96.739	ENSCAPG00000006739	-	100	96.739	Cavia_aperea
ENSG00000182004	SNRPE	100	96.739	ENSCAPG00000007891	-	100	96.739	Cavia_aperea
ENSG00000182004	SNRPE	100	96.154	ENSCAPG00000007090	-	100	95.652	Cavia_aperea
ENSG00000182004	SNRPE	100	100.000	ENSCAPG00000006904	-	100	100.000	Cavia_aperea
ENSG00000182004	SNRPE	98	94.118	ENSCAPG00000016066	-	100	81.522	Cavia_aperea
ENSG00000182004	SNRPE	100	100.000	ENSCAPG00000001019	-	100	97.826	Cavia_aperea
ENSG00000182004	SNRPE	100	96.154	ENSCPOG00000032152	-	100	95.652	Cavia_porcellus
ENSG00000182004	SNRPE	100	96.154	ENSCPOG00000033680	-	100	95.556	Cavia_porcellus
ENSG00000182004	SNRPE	100	100.000	ENSCPOG00000023757	SNRPE	100	100.000	Cavia_porcellus
ENSG00000182004	SNRPE	100	96.154	ENSCPOG00000032851	-	100	95.652	Cavia_porcellus
ENSG00000182004	SNRPE	100	94.231	ENSCPOG00000038470	-	100	75.000	Cavia_porcellus
ENSG00000182004	SNRPE	98	92.157	ENSCPOG00000040399	-	100	82.609	Cavia_porcellus
ENSG00000182004	SNRPE	100	95.652	ENSCPOG00000031058	-	100	95.652	Cavia_porcellus
ENSG00000182004	SNRPE	100	96.154	ENSCPOG00000039330	-	100	95.652	Cavia_porcellus
ENSG00000182004	SNRPE	100	100.000	ENSCCAG00000020762	-	100	100.000	Cebus_capucinus
ENSG00000182004	SNRPE	100	82.692	ENSCCAG00000032936	-	100	75.000	Cebus_capucinus
ENSG00000182004	SNRPE	100	100.000	ENSCATG00000041403	SNRPE	100	100.000	Cercocebus_atys
ENSG00000182004	SNRPE	74	92.647	ENSCLAG00000004113	-	89	92.647	Chinchilla_lanigera
ENSG00000182004	SNRPE	100	100.000	ENSCLAG00000013355	-	100	100.000	Chinchilla_lanigera
ENSG00000182004	SNRPE	100	100.000	ENSCSAG00000018742	-	100	100.000	Chlorocebus_sabaeus
ENSG00000182004	SNRPE	100	100.000	ENSCHOG00000009158	SNRPE	100	100.000	Choloepus_hoffmanni
ENSG00000182004	SNRPE	100	98.913	ENSCPBG00000017410	SNRPE	100	98.913	Chrysemys_picta_bellii
ENSG00000182004	SNRPE	92	78.824	ENSCING00000023749	-	94	78.824	Ciona_intestinalis
ENSG00000182004	SNRPE	100	73.913	ENSCSAVG00000003861	-	100	73.913	Ciona_savignyi
ENSG00000182004	SNRPE	100	100.000	ENSCANG00000036317	-	100	100.000	Colobus_angolensis_palliatus
ENSG00000182004	SNRPE	100	78.846	ENSCANG00000028439	-	100	84.810	Colobus_angolensis_palliatus
ENSG00000182004	SNRPE	95	89.773	ENSCANG00000038507	-	100	89.773	Colobus_angolensis_palliatus
ENSG00000182004	SNRPE	98	84.314	ENSCGRG00001021716	-	99	88.235	Cricetulus_griseus_chok1gshd
ENSG00000182004	SNRPE	100	95.652	ENSCGRG00001013414	-	100	95.652	Cricetulus_griseus_chok1gshd
ENSG00000182004	SNRPE	100	94.231	ENSCGRG00001001996	-	100	88.043	Cricetulus_griseus_chok1gshd
ENSG00000182004	SNRPE	100	82.692	ENSCGRG00001009217	-	99	88.372	Cricetulus_griseus_chok1gshd
ENSG00000182004	SNRPE	100	100.000	ENSCGRG00001019074	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSG00000182004	SNRPE	96	88.636	ENSCGRG00000013527	-	100	88.636	Cricetulus_griseus_crigri
ENSG00000182004	SNRPE	100	100.000	ENSCGRG00000000675	-	100	100.000	Cricetulus_griseus_crigri
ENSG00000182004	SNRPE	100	88.462	ENSCSEG00000008431	snrpe	100	83.696	Cynoglossus_semilaevis
ENSG00000182004	SNRPE	100	96.739	ENSCVAG00000020150	snrpe	100	96.739	Cyprinodon_variegatus
ENSG00000182004	SNRPE	100	94.565	ENSDARG00000033175	snrpe	100	94.565	Danio_rerio
ENSG00000182004	SNRPE	100	79.348	ENSDNOG00000033638	-	100	79.348	Dasypus_novemcinctus
ENSG00000182004	SNRPE	100	100.000	ENSDNOG00000004490	-	100	100.000	Dasypus_novemcinctus
ENSG00000182004	SNRPE	100	97.826	ENSDNOG00000040661	-	100	97.826	Dasypus_novemcinctus
ENSG00000182004	SNRPE	100	96.154	ENSDNOG00000031493	-	100	95.652	Dasypus_novemcinctus
ENSG00000182004	SNRPE	100	100.000	ENSDNOG00000042795	-	100	98.913	Dasypus_novemcinctus
ENSG00000182004	SNRPE	100	81.522	ENSDORG00000023808	-	100	81.522	Dipodomys_ordii
ENSG00000182004	SNRPE	100	100.000	ENSDORG00000024454	-	100	100.000	Dipodomys_ordii
ENSG00000182004	SNRPE	100	82.692	ENSDORG00000023576	-	100	65.217	Dipodomys_ordii
ENSG00000182004	SNRPE	100	96.154	ENSDORG00000029115	-	100	96.154	Dipodomys_ordii
ENSG00000182004	SNRPE	100	98.913	ENSDORG00000023819	-	100	98.913	Dipodomys_ordii
ENSG00000182004	SNRPE	100	94.231	ENSDORG00000026946	-	100	93.478	Dipodomys_ordii
ENSG00000182004	SNRPE	100	86.538	ENSDORG00000028315	-	97	85.333	Dipodomys_ordii
ENSG00000182004	SNRPE	99	75.824	FBgn0261790	SmE	96	75.824	Drosophila_melanogaster
ENSG00000182004	SNRPE	90	78.723	ENSETEG00000001249	-	99	68.966	Echinops_telfairi
ENSG00000182004	SNRPE	100	84.615	ENSETEG00000015545	-	97	89.189	Echinops_telfairi
ENSG00000182004	SNRPE	100	78.261	ENSETEG00000013892	-	99	78.261	Echinops_telfairi
ENSG00000182004	SNRPE	100	100.000	ENSETEG00000014015	-	100	100.000	Echinops_telfairi
ENSG00000182004	SNRPE	100	100.000	ENSEASG00005011462	SNRPE	80	100.000	Equus_asinus_asinus
ENSG00000182004	SNRPE	100	100.000	ENSECAG00000030680	-	100	90.217	Equus_caballus
ENSG00000182004	SNRPE	100	93.478	ENSELUG00000012430	snrpe	100	93.478	Esox_lucius
ENSG00000182004	SNRPE	100	100.000	ENSFCAG00000042558	SNRPE	100	100.000	Felis_catus
ENSG00000182004	SNRPE	100	100.000	ENSFALG00000000488	SNRPE	100	86.957	Ficedula_albicollis
ENSG00000182004	SNRPE	100	100.000	ENSFDAG00000009037	SNRPE	100	100.000	Fukomys_damarensis
ENSG00000182004	SNRPE	100	96.739	ENSFHEG00000019712	snrpe	100	96.739	Fundulus_heteroclitus
ENSG00000182004	SNRPE	98	94.444	ENSGMOG00000016322	snrpe	100	94.444	Gadus_morhua
ENSG00000182004	SNRPE	100	100.000	ENSGALG00000000137	SNRPE	100	100.000	Gallus_gallus
ENSG00000182004	SNRPE	100	94.231	ENSGAFG00000006716	snrpe	100	85.870	Gambusia_affinis
ENSG00000182004	SNRPE	100	93.478	ENSGACG00000010920	snrpe	100	93.478	Gasterosteus_aculeatus
ENSG00000182004	SNRPE	100	98.913	ENSGAGG00000006438	SNRPE	100	98.913	Gopherus_agassizii
ENSG00000182004	SNRPE	72	81.818	ENSGGOG00000000755	-	97	81.818	Gorilla_gorilla
ENSG00000182004	SNRPE	100	88.462	ENSGGOG00000042851	-	100	85.870	Gorilla_gorilla
ENSG00000182004	SNRPE	88	89.130	ENSGGOG00000040431	-	100	77.215	Gorilla_gorilla
ENSG00000182004	SNRPE	62	91.228	ENSGGOG00000042820	-	92	91.228	Gorilla_gorilla
ENSG00000182004	SNRPE	100	100.000	ENSGGOG00000043102	SNRPE	100	100.000	Gorilla_gorilla
ENSG00000182004	SNRPE	83	93.421	ENSHBUG00000006106	snrpe	100	72.826	Haplochromis_burtoni
ENSG00000182004	SNRPE	100	100.000	ENSHGLG00000004221	SNRPE	100	100.000	Heterocephalus_glaber_female
ENSG00000182004	SNRPE	100	100.000	ENSHGLG00100010028	SNRPE	100	100.000	Heterocephalus_glaber_male
ENSG00000182004	SNRPE	99	91.209	ENSHCOG00000019590	snrpe	99	91.209	Hippocampus_comes
ENSG00000182004	SNRPE	99	93.407	ENSIPUG00000004562	snrpe	99	93.407	Ictalurus_punctatus
ENSG00000182004	SNRPE	100	100.000	ENSSTOG00000021817	-	100	100.000	Ictidomys_tridecemlineatus
ENSG00000182004	SNRPE	100	100.000	ENSSTOG00000031197	-	100	100.000	Ictidomys_tridecemlineatus
ENSG00000182004	SNRPE	100	90.385	ENSJJAG00000007840	-	100	90.217	Jaculus_jaculus
ENSG00000182004	SNRPE	100	94.231	ENSJJAG00000022841	-	100	91.304	Jaculus_jaculus
ENSG00000182004	SNRPE	100	96.739	ENSKMAG00000005461	snrpe	100	96.739	Kryptolebias_marmoratus
ENSG00000182004	SNRPE	85	88.636	ENSLBEG00000008062	snrpe	100	71.739	Labrus_bergylta
ENSG00000182004	SNRPE	100	94.565	ENSLBEG00000010571	-	100	94.565	Labrus_bergylta
ENSG00000182004	SNRPE	100	94.565	ENSLACG00000012610	SNRPE	100	94.565	Latimeria_chalumnae
ENSG00000182004	SNRPE	100	94.565	ENSLOCG00000011927	snrpe	100	94.565	Lepisosteus_oculatus
ENSG00000182004	SNRPE	100	100.000	ENSLAFG00000009349	SNRPE	100	100.000	Loxodonta_africana
ENSG00000182004	SNRPE	100	100.000	ENSMFAG00000039994	SNRPE	100	100.000	Macaca_fascicularis
ENSG00000182004	SNRPE	100	94.340	ENSMFAG00000041204	-	100	94.340	Macaca_fascicularis
ENSG00000182004	SNRPE	86	86.076	ENSMFAG00000045842	-	98	86.076	Macaca_fascicularis
ENSG00000182004	SNRPE	100	100.000	ENSMMUG00000031372	SNRPE	100	100.000	Macaca_mulatta
ENSG00000182004	SNRPE	98	82.353	ENSMMUG00000038815	-	100	78.261	Macaca_mulatta
ENSG00000182004	SNRPE	100	81.522	ENSMMUG00000015232	-	100	81.522	Macaca_mulatta
ENSG00000182004	SNRPE	86	86.076	ENSMMUG00000005709	-	98	86.076	Macaca_mulatta
ENSG00000182004	SNRPE	100	100.000	ENSMNEG00000034559	-	100	100.000	Macaca_nemestrina
ENSG00000182004	SNRPE	82	89.333	ENSMLEG00000037002	-	83	89.333	Mandrillus_leucophaeus
ENSG00000182004	SNRPE	100	100.000	ENSMLEG00000043360	-	100	100.000	Mandrillus_leucophaeus
ENSG00000182004	SNRPE	100	95.652	ENSMAMG00000023509	snrpe	100	95.652	Mastacembelus_armatus
ENSG00000182004	SNRPE	83	93.421	ENSMZEG00005007826	snrpe	100	72.826	Maylandia_zebra
ENSG00000182004	SNRPE	100	100.000	ENSMGAG00000002674	-	100	100.000	Meleagris_gallopavo
ENSG00000182004	SNRPE	100	90.385	ENSMICG00000029654	-	99	84.706	Microcebus_murinus
ENSG00000182004	SNRPE	100	100.000	ENSMICG00000015537	-	100	100.000	Microcebus_murinus
ENSG00000182004	SNRPE	100	100.000	ENSMOCG00000019341	Snrpe	100	100.000	Microtus_ochrogaster
ENSG00000182004	SNRPE	100	95.652	ENSMMOG00000010041	snrpe	100	95.652	Mola_mola
ENSG00000182004	SNRPE	100	100.000	ENSMODG00000028394	SNRPE	100	100.000	Monodelphis_domestica
ENSG00000182004	SNRPE	85	88.636	ENSMALG00000013505	snrpe	100	71.739	Monopterus_albus
ENSG00000182004	SNRPE	100	100.000	MGP_CAROLIEiJ_G0014603	-	100	100.000	Mus_caroli
ENSG00000182004	SNRPE	100	100.000	ENSMUSG00000090553	Snrpe	100	100.000	Mus_musculus
ENSG00000182004	SNRPE	100	100.000	MGP_PahariEiJ_G0027839	Snrpe	100	100.000	Mus_pahari
ENSG00000182004	SNRPE	100	100.000	MGP_SPRETEiJ_G0015410	-	100	100.000	Mus_spretus
ENSG00000182004	SNRPE	100	82.609	ENSMPUG00000018623	-	100	82.609	Mustela_putorius_furo
ENSG00000182004	SNRPE	100	98.913	ENSMPUG00000011642	-	100	98.913	Mustela_putorius_furo
ENSG00000182004	SNRPE	98	100.000	ENSMLUG00000013374	-	99	97.436	Myotis_lucifugus
ENSG00000182004	SNRPE	100	98.913	ENSMLUG00000013244	-	100	98.913	Myotis_lucifugus
ENSG00000182004	SNRPE	96	88.000	ENSNGAG00000003090	-	100	79.348	Nannospalax_galili
ENSG00000182004	SNRPE	100	100.000	ENSNGAG00000021588	-	100	100.000	Nannospalax_galili
ENSG00000182004	SNRPE	100	90.385	ENSNGAG00000024125	-	100	88.043	Nannospalax_galili
ENSG00000182004	SNRPE	100	95.652	ENSNBRG00000015473	snrpe	100	95.652	Neolamprologus_brichardi
ENSG00000182004	SNRPE	100	96.154	ENSNLEG00000018987	-	100	95.652	Nomascus_leucogenys
ENSG00000182004	SNRPE	100	100.000	ENSNLEG00000027348	-	100	100.000	Nomascus_leucogenys
ENSG00000182004	SNRPE	100	83.696	ENSNLEG00000035496	-	100	83.696	Nomascus_leucogenys
ENSG00000182004	SNRPE	100	100.000	ENSMEUG00000015262	-	100	100.000	Notamacropus_eugenii
ENSG00000182004	SNRPE	100	100.000	ENSOPRG00000015415	-	100	100.000	Ochotona_princeps
ENSG00000182004	SNRPE	100	100.000	ENSODEG00000013393	-	100	100.000	Octodon_degus
ENSG00000182004	SNRPE	100	86.957	ENSODEG00000005667	-	100	86.957	Octodon_degus
ENSG00000182004	SNRPE	100	98.077	ENSODEG00000019221	-	100	97.826	Octodon_degus
ENSG00000182004	SNRPE	100	98.077	ENSODEG00000020345	-	100	95.652	Octodon_degus
ENSG00000182004	SNRPE	88	93.827	ENSODEG00000001539	-	93	93.827	Octodon_degus
ENSG00000182004	SNRPE	100	100.000	ENSODEG00000019677	-	100	95.652	Octodon_degus
ENSG00000182004	SNRPE	100	98.913	ENSOANG00000003101	-	100	98.913	Ornithorhynchus_anatinus
ENSG00000182004	SNRPE	100	93.478	ENSORLG00000012059	snrpe	100	93.478	Oryzias_latipes
ENSG00000182004	SNRPE	100	94.565	ENSORLG00020002444	snrpe	71	94.565	Oryzias_latipes_hni
ENSG00000182004	SNRPE	100	94.565	ENSORLG00015000709	snrpe	100	94.565	Oryzias_latipes_hsok
ENSG00000182004	SNRPE	100	95.652	ENSOMEG00000001093	snrpe	100	95.652	Oryzias_melastigma
ENSG00000182004	SNRPE	83	98.684	ENSOGAG00000004309	-	100	98.684	Otolemur_garnettii
ENSG00000182004	SNRPE	100	90.385	ENSOARG00000006169	-	100	89.130	Ovis_aries
ENSG00000182004	SNRPE	100	81.522	ENSPPAG00000036771	-	100	81.522	Pan_paniscus
ENSG00000182004	SNRPE	100	100.000	ENSPPAG00000041057	-	100	100.000	Pan_paniscus
ENSG00000182004	SNRPE	78	84.722	ENSPPAG00000040781	-	97	84.722	Pan_paniscus
ENSG00000182004	SNRPE	100	82.692	ENSPPRG00000015827	-	96	82.692	Panthera_pardus
ENSG00000182004	SNRPE	100	100.000	ENSPPRG00000024940	-	100	100.000	Panthera_pardus
ENSG00000182004	SNRPE	100	100.000	ENSPTIG00000010866	-	100	100.000	Panthera_tigris_altaica
ENSG00000182004	SNRPE	88	86.957	ENSPTIG00000005218	-	85	71.795	Panthera_tigris_altaica
ENSG00000182004	SNRPE	78	84.722	ENSPTRG00000044112	-	97	84.722	Pan_troglodytes
ENSG00000182004	SNRPE	100	100.000	ENSPTRG00000043604	-	100	100.000	Pan_troglodytes
ENSG00000182004	SNRPE	88	89.130	ENSPTRG00000051412	-	100	77.215	Pan_troglodytes
ENSG00000182004	SNRPE	100	85.870	ENSPTRG00000051112	-	100	85.870	Pan_troglodytes
ENSG00000182004	SNRPE	100	100.000	ENSPANG00000034978	-	100	100.000	Papio_anubis
ENSG00000182004	SNRPE	86	87.342	ENSPANG00000013978	-	98	87.342	Papio_anubis
ENSG00000182004	SNRPE	100	90.385	ENSPKIG00000013388	snrpe	100	84.783	Paramormyrops_kingsleyae
ENSG00000182004	SNRPE	100	100.000	ENSPSIG00000008935	-	81	100.000	Pelodiscus_sinensis
ENSG00000182004	SNRPE	100	94.231	ENSPMGG00000015145	snrpe	100	89.130	Periophthalmus_magnuspinnatus
ENSG00000182004	SNRPE	100	100.000	ENSPEMG00000008031	Snrpe	100	100.000	Peromyscus_maniculatus_bairdii
ENSG00000182004	SNRPE	95	90.805	ENSPMAG00000007487	snrpe	61	90.805	Petromyzon_marinus
ENSG00000182004	SNRPE	100	100.000	ENSPCIG00000017391	-	100	100.000	Phascolarctos_cinereus
ENSG00000182004	SNRPE	96	88.000	ENSPCIG00000026036	-	94	88.000	Phascolarctos_cinereus
ENSG00000182004	SNRPE	98	92.157	ENSPCIG00000011682	-	78	92.157	Phascolarctos_cinereus
ENSG00000182004	SNRPE	82	82.667	ENSPCIG00000020779	-	100	82.667	Phascolarctos_cinereus
ENSG00000182004	SNRPE	100	96.739	ENSPFOG00000004702	snrpe	100	96.739	Poecilia_formosa
ENSG00000182004	SNRPE	100	96.739	ENSPLAG00000004982	snrpe	100	96.739	Poecilia_latipinna
ENSG00000182004	SNRPE	100	96.739	ENSPMEG00000001852	snrpe	100	96.739	Poecilia_mexicana
ENSG00000182004	SNRPE	100	95.652	ENSPREG00000018043	snrpe	100	95.652	Poecilia_reticulata
ENSG00000182004	SNRPE	100	95.652	ENSPPYG00000014024	-	100	95.652	Pongo_abelii
ENSG00000182004	SNRPE	100	100.000	ENSPPYG00000000326	-	100	100.000	Pongo_abelii
ENSG00000182004	SNRPE	100	95.652	ENSPPYG00000019223	-	100	95.652	Pongo_abelii
ENSG00000182004	SNRPE	85	86.364	ENSPCAG00000011199	SNRPE	100	70.652	Procavia_capensis
ENSG00000182004	SNRPE	80	100.000	ENSPCOG00000021529	-	100	100.000	Propithecus_coquereli
ENSG00000182004	SNRPE	100	96.154	ENSPCOG00000011375	-	100	96.154	Propithecus_coquereli
ENSG00000182004	SNRPE	100	73.077	ENSPCOG00000013731	-	100	79.070	Propithecus_coquereli
ENSG00000182004	SNRPE	100	80.769	ENSPCOG00000013853	-	100	76.471	Propithecus_coquereli
ENSG00000182004	SNRPE	100	96.154	ENSPCOG00000014094	-	100	96.154	Propithecus_coquereli
ENSG00000182004	SNRPE	100	95.652	ENSPNYG00000005592	snrpe	100	95.652	Pundamilia_nyererei
ENSG00000182004	SNRPE	100	94.565	ENSPNAG00000013300	snrpe	100	94.565	Pygocentrus_nattereri
ENSG00000182004	SNRPE	100	100.000	ENSRNOG00000031127	Snrpe	100	98.913	Rattus_norvegicus
ENSG00000182004	SNRPE	100	98.077	ENSRNOG00000034206	AC096024.2	100	97.826	Rattus_norvegicus
ENSG00000182004	SNRPE	98	82.353	ENSRBIG00000043777	-	100	82.500	Rhinopithecus_bieti
ENSG00000182004	SNRPE	100	100.000	ENSRBIG00000040161	SNRPE	100	100.000	Rhinopithecus_bieti
ENSG00000182004	SNRPE	86	86.076	ENSRBIG00000033529	-	95	86.076	Rhinopithecus_bieti
ENSG00000182004	SNRPE	98	86.275	ENSRROG00000036614	-	98	85.455	Rhinopithecus_roxellana
ENSG00000182004	SNRPE	100	98.913	ENSRROG00000032108	-	100	98.913	Rhinopithecus_roxellana
ENSG00000182004	SNRPE	100	81.522	ENSRROG00000031357	-	98	81.522	Rhinopithecus_roxellana
ENSG00000182004	SNRPE	94	50.000	YOR159C	SME1	90	49.412	Saccharomyces_cerevisiae
ENSG00000182004	SNRPE	91	88.095	ENSSBOG00000031779	-	94	88.095	Saimiri_boliviensis_boliviensis
ENSG00000182004	SNRPE	100	100.000	ENSSBOG00000034982	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSG00000182004	SNRPE	100	100.000	ENSSHAG00000002978	-	100	100.000	Sarcophilus_harrisii
ENSG00000182004	SNRPE	100	93.478	ENSSFOG00015001485	snrpe	100	93.478	Scleropages_formosus
ENSG00000182004	SNRPE	100	95.652	ENSSMAG00000017792	snrpe	100	95.652	Scophthalmus_maximus
ENSG00000182004	SNRPE	83	93.421	ENSSDUG00000010256	snrpe	63	93.421	Seriola_dumerili
ENSG00000182004	SNRPE	100	95.652	ENSSLDG00000015364	snrpe	100	95.652	Seriola_lalandi_dorsalis
ENSG00000182004	SNRPE	100	100.000	ENSSARG00000003311	-	100	100.000	Sorex_araneus
ENSG00000182004	SNRPE	100	75.000	ENSSARG00000004546	-	99	75.824	Sorex_araneus
ENSG00000182004	SNRPE	100	88.462	ENSSPUG00000011701	-	100	84.810	Sphenodon_punctatus
ENSG00000182004	SNRPE	100	100.000	ENSSPUG00000000685	SNRPE	100	100.000	Sphenodon_punctatus
ENSG00000182004	SNRPE	100	95.652	ENSSPAG00000016345	snrpe	100	95.652	Stegastes_partitus
ENSG00000182004	SNRPE	99	78.022	ENSSSCG00000031582	-	100	78.022	Sus_scrofa
ENSG00000182004	SNRPE	100	100.000	ENSSSCG00000023562	SNRPE	100	100.000	Sus_scrofa
ENSG00000182004	SNRPE	100	94.565	ENSTRUG00000025934	snrpe	100	94.565	Takifugu_rubripes
ENSG00000182004	SNRPE	100	90.385	ENSTRUG00000025909	SNRPE	100	84.783	Takifugu_rubripes
ENSG00000182004	SNRPE	100	95.652	ENSTNIG00000007373	snrpe	100	95.652	Tetraodon_nigroviridis
ENSG00000182004	SNRPE	100	100.000	ENSUAMG00000010564	-	100	90.217	Ursus_americanus
ENSG00000182004	SNRPE	83	80.263	ENSUAMG00000003406	-	97	80.263	Ursus_americanus
ENSG00000182004	SNRPE	83	80.263	ENSUAMG00000005257	-	97	80.263	Ursus_americanus
ENSG00000182004	SNRPE	100	100.000	ENSUMAG00000005861	SNRPE	69	100.000	Ursus_maritimus
ENSG00000182004	SNRPE	83	80.263	ENSUMAG00000014081	-	97	80.263	Ursus_maritimus
ENSG00000182004	SNRPE	100	100.000	ENSVPAG00000011162	-	100	100.000	Vicugna_pacos
ENSG00000182004	SNRPE	92	89.583	ENSVVUG00000028358	-	98	89.583	Vulpes_vulpes
ENSG00000182004	SNRPE	98	88.235	ENSVVUG00000018389	-	100	87.342	Vulpes_vulpes
ENSG00000182004	SNRPE	100	91.304	ENSVVUG00000004483	-	98	91.304	Vulpes_vulpes
ENSG00000182004	SNRPE	100	100.000	ENSVVUG00000014984	-	100	100.000	Vulpes_vulpes
ENSG00000182004	SNRPE	100	97.826	ENSXETG00000004471	snrpe	100	97.826	Xenopus_tropicalis
ENSG00000182004	SNRPE	100	94.231	ENSXCOG00000009271	snrpe	100	86.170	Xiphophorus_couchianus
ENSG00000182004	SNRPE	100	96.739	ENSXMAG00000008850	snrpe	100	96.739	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000245	spliceosomal complex assembly	2974536.	NAS	Process
GO:0000387	spliceosomal snRNP assembly	21873635.	IBA	Process
GO:0000387	spliceosomal snRNP assembly	18984161.	IDA	Process
GO:0000387	spliceosomal snRNP assembly	-	TAS	Process
GO:0000398	mRNA splicing, via spliceosome	11991638.	IC	Process
GO:0000398	mRNA splicing, via spliceosome	28076346.	IDA	Process
GO:0000398	mRNA splicing, via spliceosome	-	TAS	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005515	protein binding	9417867.11714716.11748230.12065586.18984161.22365833.30021884.	IPI	Function
GO:0005634	nucleus	23246290.28076346.	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005681	spliceosomal complex	2974536.	NAS	Component
GO:0005682	U5 snRNP	21873635.	IBA	Component
GO:0005683	U7 snRNP	11574479.	IDA	Component
GO:0005685	U1 snRNP	21873635.	IBA	Component
GO:0005685	U1 snRNP	21113136.25555158.	IDA	Component
GO:0005686	U2 snRNP	21873635.	IBA	Component
GO:0005687	U4 snRNP	21873635.	IBA	Component
GO:0005687	U4 snRNP	21516107.	IDA	Component
GO:0005689	U12-type spliceosomal complex	15146077.	IDA	Component
GO:0005697	telomerase holoenzyme complex	18082603.	IDA	Component
GO:0005829	cytosol	18984161.	IDA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0006369	termination of RNA polymerase II transcription	-	TAS	Process
GO:0008334	histone mRNA metabolic process	-	TAS	Process
GO:0030532	small nuclear ribonucleoprotein complex	2974536.	NAS	Component
GO:0034709	methylosome	18984161.	IDA	Component
GO:0034715	pICln-Sm protein complex	18984161.	IDA	Component
GO:0034719	SMN-Sm protein complex	18984161.	IDA	Component
GO:0042633	hair cycle	23246290.	IMP	Process
GO:0046540	U4/U6 x U5 tri-snRNP complex	21873635.	IBA	Component
GO:0046540	U4/U6 x U5 tri-snRNP complex	26912367.	IDA	Component
GO:0051170	import into nucleus	-	TAS	Process
GO:0071005	U2-type precatalytic spliceosome	28781166.	IDA	Component
GO:0071007	U2-type catalytic step 2 spliceosome	28076346.	IDA	Component
GO:0071013	catalytic step 2 spliceosome	11991638.	IDA	Component

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

Literatures

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.