EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr646689810Missense_MutationnovelD561G0.45
ACCchr646690382Missense_MutationnovelM752L0.35
ACCchr646689445Silentrs756731573S439S0.41
BLCAchr646690608Missense_MutationnovelR827Q0.12
BLCAchr646693207Missense_MutationnovelE1693D0.09
BLCAchr646690739Missense_MutationnovelE871K0.15
BLCAchr646693082Missense_MutationNAD1652H0.19
BLCAchr646689629Missense_MutationNAE501Q0.08
BLCAchr646693699SilentnovelQ1857Q0.23
BLCAchr646692202Missense_MutationNAM1358I0.12
BLCAchr646688876Missense_MutationNAV250M0.49
BLCAchr646693733Missense_MutationNAL1869V0.15
BLCAchr646688684Missense_Mutationrs768589583D186H0.3
BLCAchr646692609Missense_MutationNAS1494T0.13
BLCAchr646693662Nonsense_MutationNAS1845*0.14
BLCAchr646698003Missense_MutationNAL2059F0.19
BLCAchr646693544Missense_MutationNAE1806Q0.25
BLCAchr646689127SilentnovelE333E0.45
BLCAchr646693070Missense_MutationNAQ1648E0.12
BLCAchr646690883Nonsense_MutationNAE919*0.12
BLCAchr646690252SilentNAQ708Q0.41
BLCAchr646689629Missense_MutationNAE501Q0.26
BLCAchr646695884Nonsense_MutationnovelS2037*0.25
BLCAchr646690538Missense_MutationnovelD804N0.24
BRCAchr646689144Missense_MutationnovelR339H0.17
BRCAchr646693940Missense_MutationnovelE1938K0.07
BRCAchr646689608Missense_MutationNAE494Q0.12
BRCAchr646692404Frame_Shift_DelnovelP1426Ffs*20.15
BRCAchr646690846Missense_MutationnovelF906L0.06
BRCAchr646693102Frame_Shift_DelnovelT1659Qfs*70.06
BRCAchr646692879Missense_MutationNAY1584F0.18TUDOR
BRCAchr6467019313'UTRnovel0.42
BRCAchr646691577Missense_MutationNAA1150V0.15
BRCAchr646689604SilentnovelQ492Q0.05
BRCAchr646689267Missense_MutationnovelG380A0.14
BRCAchr646691868Missense_MutationnovelN1247S0.35
BRCAchr6467021343'UTRnovel0.19
BRCAchr6467021353'UTRnovel0.19
BRCAchr646690020Missense_MutationNAI631S0.43
BRCAchr646691050SilentnovelS974S0.08
BRCAchr646691117Missense_MutationNAD997N0.39
BRCAchr646690680Missense_MutationNAF851Y0.13
BRCAchr646688722SilentnovelR198R0.44
BRCAchr646690985Missense_Mutationrs142686920E953Q0.13
BRCAchr646691958Missense_MutationNAS1277L0.39
BRCAchr646691913Missense_MutationNAS1262F0.5
BRCAchr646689368Missense_MutationNAS414T0.22
BRCAchr6467021333'UTRnovel0.2
BRCAchr646690207Silentrs377047426T693T0.21
BRCAchr646689378Missense_MutationNAH417R0.24
BRCAchr646691255Nonsense_MutationnovelK1043*0.04
BRCAchr646689509Nonsense_MutationnovelQ461*0.11
CESCchr646689221Missense_MutationNAE365Q0.12
CESCchr646691584Missense_MutationNAI1152M0.19
CESCchr646692869Missense_MutationNAD1581Y0.26TUDOR
CESCchr646690779Missense_Mutationrs778515332L884P0.23
CESCchr646689646Missense_MutationNAL506F0.39
CESCchr646689684Missense_MutationnovelR519K0.23
CESCchr646690538Missense_MutationnovelD804N0.13
CESCchr646688383SilentNAR85R0.38
CESCchr646689402Missense_MutationNAG425E0.8
CESCchr646693652Missense_MutationNAD1842H0.27
CESCchr646689316SilentnovelL396L0.07
CESCchr646688702Missense_Mutationrs572687262R192W0.41
CESCchr646698045SilentnovelN2073N0.34
CESCchr646688720Missense_Mutationrs781647844R198W0.58
CESCchr646692353Missense_MutationnovelA1409T0.31
CESCchr646691165Missense_MutationNAE1013K0.43
CHOLchr646690719Frame_Shift_InsnovelI865Cfs*170.27
COADchr646689616Frame_Shift_InsNAN498Kfs*40.35
COADchr646691308SilentNAK1060K0.41
COADchr646691797SilentnovelE1223E0.08
COADchr646692063Missense_MutationNAS1312Y0.32
COADchr646690388Missense_MutationNAN754Y0.17
COADchr646689230Nonsense_MutationNAR368*0.1
COADchr646693224Missense_MutationnovelS1699Y0.23
COADchr646693899Missense_MutationnovelS1924Y0.17
COADchr646691327Missense_MutationnovelF1067V0.7
COADchr646691317Missense_MutationnovelF1063L0.14
COADchr646691752Missense_MutationNAI1208M0.3
COADchr646689331SilentnovelL401L0.04
COADchr646690872Frame_Shift_DelNAN917Ifs*20.35
COADchr646691805Missense_MutationNAL1226P0.4
COADchr646692332Missense_MutationNAG1402C0.37
COADchr646688846Missense_MutationnovelD240Y0.16
COADchr646688916Missense_MutationnovelH263R0.12
COADchr646689231Missense_Mutationrs373561239R368Q0.08
COADchr646689721SilentNAD531D0.25
COADchr646689134Missense_Mutationrs746421668R336W0.09
COADchr646692208SilentnovelC1360C0.33
COADchr646693245Missense_MutationNAA1706V0.09
COADchr646695934Missense_MutationNAE2054K0.37
COADchr646688912Missense_MutationnovelP262S0.18
COADchr646689446Frame_Shift_InsnovelC440Wfs*50.13
COADchr646691990Missense_MutationNAD1288Y0.18
COADchr646692283SilentNAV1385V0.3
COADchr646690571Missense_Mutationrs772802461P815S0.16
COADchr646691443Missense_MutationnovelD1105E0.04
COADchr646692659Missense_MutationNAL1511I0.2
COADchr646692984Missense_MutationNAA1619V0.18TUDOR
COADchr646693559Missense_MutationNAY1811H0.29
COADchr646693032Missense_MutationnovelC1635F0.06TUDOR
COADchr646693034Frame_Shift_InsnovelL1636Qfs*60.06TUDOR
COADchr646691255Nonsense_MutationnovelK1043*0.04
DLBCchr646691256Missense_MutationNAK1043T0.3
DLBCchr646698089Splice_SitenovelX2087_splice0.38
DLBCchr646688412Missense_MutationNAR95H0.48
ESCAchr646688913Missense_MutationnovelP262H0.31
ESCAchr646689843Missense_MutationNAR572Q0.21
ESCAchr6467020213'UTRnovel0.35
ESCAchr646689182Missense_Mutationrs759445214E352K0.12
ESCAchr646688629SilentnovelH167H0.64
ESCAchr646690527Missense_MutationnovelT800S0.33
ESCAchr646689784SilentnovelY552Y0.43
GBMchr646690464Missense_MutationNAS779C0.43
GBMchr646692773Missense_MutationnovelV1549L0.06TUDOR
GBMchr646692517Frame_Shift_DelnovelD1464Mfs*60.06
GBMchr646691266Missense_MutationNAD1046E0.42
GBMchr646689600Missense_Mutationrs144889394A491V0.29
GBMchr646693642Silentrs765653817P1838P0.28
GBMchr646695940Missense_MutationnovelT2056A0.59
GBMchr646693388Missense_MutationnovelT1754P0.94
GBMchr646691106Missense_Mutationrs369734344T993M0.09
GBMchr646690221Missense_MutationnovelI698K0.19
GBMchr646691845Nonsense_MutationnovelY1239*0.07
GBMchr646690192SilentnovelS688S0.04
GBMchr646690140Missense_MutationnovelF671Y0.11
GBMchr646692182Missense_MutationnovelP1352T0.06
GBMchr646692503Missense_MutationnovelE1459K0.05
GBMchr646688548SilentnovelG140G0.39
GBMchr646692210Missense_Mutationrs763386309A1361D0.38
GBMchr646693710Missense_MutationnovelV1861A0.07
GBMchr646689000Missense_Mutationrs763840866T291M0.44
GBMchr6467020033'UTRnovel0.06
GBMchr646692129Missense_MutationnovelL1334P0.35
GBMchr646692145Missense_MutationnovelN1339K0.14
GBMchr646693155Missense_MutationnovelD1676G0.54
GBMchr646692306Missense_MutationnovelV1393D0.17
GBMchr646692913Missense_MutationnovelD1595E0.11TUDOR
GBMchr646693129SilentnovelI1667I0.46
GBMchr646693967Missense_MutationnovelE1947K0.21
HNSCchr646691771Missense_MutationnovelP1215S0.21
HNSCchr646692229SilentnovelN1367N0.29
HNSCchr646692804Missense_MutationnovelA1559E0.14TUDOR
HNSCchr646690859Missense_MutationnovelD911N0.54
HNSCchr646688516Missense_MutationnovelV130M0.54
HNSCchr646690349Missense_MutationnovelK741E0.5
HNSCchr646689292Missense_MutationnovelW388C0.37
HNSCchr646692839Missense_MutationnovelG1571R0.13TUDOR
HNSCchr646693857Missense_MutationnovelP1910H0.11
HNSCchr646694117Nonsense_MutationnovelE1997*0.12
HNSCchr646692476Nonsense_MutationnovelE1450*0.25
HNSCchr646689298SilentnovelR390R0.34
HNSCchr646694117Nonsense_MutationnovelE1997*0.09
HNSCchr646693055Missense_MutationnovelE1643Q0.21
HNSCchr646691176SilentnovelS1016S0.22
HNSCchr646689316SilentnovelL396L0.38
HNSCchr646689637Nonsense_MutationnovelW503*0.11
HNSCchr646689879Missense_Mutationrs749874371R584T0.29
HNSCchr646689552Frame_Shift_InsnovelA477Sfs*210.19
KIRCchr646689008Missense_MutationNAG294R0.29
KIRCchr646691140Missense_MutationnovelQ1004H0.05
KIRCchr646691063Frame_Shift_DelnovelT979Kfs*70.07
KIRCchr646690669SilentnovelV847V0.18
KIRCchr646692382SilentNAC1418C0.18
KIRCchr646694007Missense_MutationNAH1960L0.46
KIRCchr646689902Missense_MutationNAQ592E0.24
KIRPchr646692810Missense_MutationNAR1561T0.43TUDOR
LAMLchr646692301SilentnovelG1391G0.16
LGGchr646692435Missense_MutationnovelH1436R0.06
LGGchr646688881SilentNAT251T0.08
LGGchr646688158Silentrs770066069P10P0.25
LGGchr646692369Missense_MutationnovelL1414S0.38
LGGchr646690615Frame_Shift_DelnovelN830Qfs*90.04
LGGchr646692759Missense_MutationnovelL1544P0.06TUDOR
LGGchr646688545Silentrs752645493C139C0.15
LGGchr646689842Nonsense_Mutationrs141346043R572*0.36
LGGchr646689171Missense_Mutationrs752370801Y348C0.06
LGGchr646692137Missense_MutationnovelR1337G0.05
LGGchr646689143Missense_MutationnovelR339C0.4
LIHCchr646688308Missense_MutationnovelW60C0.11
LIHCchr646692704Missense_MutationNAT1526A0.31TUDOR
LIHCchr646693949Nonsense_MutationnovelR1941*0.25
LIHCchr646690256Missense_MutationNAA710T0.31
LIHCchr646692504Missense_MutationNAE1459V0.32
LIHCchr646689499Silentrs769106093P457P0.5
LIHCchr646690525Missense_MutationnovelK799N0.46
LIHCchr646688386SilentnovelV86V0.4
LUADchr646689812Missense_MutationNAD562Y0.22
LUADchr646688550Missense_Mutationrs756075371A141E0.38
LUADchr646691546Missense_MutationnovelE1140K0.25
LUADchr646691550Missense_MutationnovelL1141P0.35
LUADchr646689426Missense_Mutationrs551757424R433H0.11
LUADchr646689377Missense_Mutationrs777197011H417Y0.26
LUADchr646691819Missense_MutationnovelT1231S0.13
LUADchr646693406Missense_MutationnovelI1760F0.06
LUADchr646688793Missense_MutationnovelS222F0.18
LUADchr646689149Missense_MutationnovelA341S0.18
LUADchr646691781Missense_MutationnovelN1218I0.47
LUADchr646692044Nonsense_MutationNAK1306*0.45
LUADchr646689862SilentNAV578V0.23
LUADchr646691106Missense_MutationNAT993R0.39
LUADchr646689637Missense_MutationnovelW503C0.16
LUADchr646693493Missense_MutationNAD1789N0.1
LUADchr646689231Missense_Mutationrs373561239R368Q0.18
LUADchr646691522Missense_MutationnovelD1132H0.04
LUADchr646691044SilentNAL972L0.71
LUADchr646690449Missense_MutationnovelV774A0.15
LUADchr646688800Silentrs377243726V224V0.41
LUADchr646689262Missense_MutationNAL378F0.35
LUADchr646692362Missense_MutationNAP1412A0.42
LUADchr646690992Missense_MutationnovelR955K0.22
LUADchr646690446Missense_MutationNAT773I0.54
LUADchr646693003SilentNAL1625L0.21
LUADchr646695934Nonsense_Mutationrs754359392E2054*0.15
LUADchr646690003SilentnovelL625L0.26
LUADchr646691573Missense_MutationnovelS1149C0.31
LUSCchr646689488Missense_MutationnovelE454K0.2
LUSCchr646689437Missense_MutationnovelV437L0.13
LUSCchr646691894Missense_MutationnovelE1256K0.1
LUSCchr646693024SilentnovelF1632F0.5
LUSCchr646690159SilentnovelI677I0.34
LUSCchr646693262Frame_Shift_DelnovelI1712Vfs*50.1
LUSCchr646693273Missense_MutationnovelE1715D0.08
LUSCchr646692458Missense_Mutationrs139292044E1444K0.15
LUSCchr646690392Missense_MutationNAC755F0.21
LUSCchr646694096Missense_MutationnovelA1990S0.3
LUSCchr646690031Missense_MutationNAD635H0.19
LUSCchr646693047Missense_MutationnovelN1640S0.31
LUSCchr646691467SilentNAV1113V0.39
LUSCchr646689990Missense_MutationnovelK621R0.17
LUSCchr646688662SilentnovelR178R0.28
LUSCchr646693063Missense_MutationnovelL1645F0.25
LUSCchr646693786Silentrs373939719G1886G0.42
LUSCchr646690315SilentnovelV729V0.34
LUSCchr646689716In_Frame_DelnovelL530_V533del0.12
LUSCchr646689922SilentNAV598V0.61
LUSCchr646692210Missense_MutationnovelA1361V0.25
LUSCchr646692541In_Frame_DelnovelD1472_S1480del0.85
LUSCchr646701879Nonsense_MutationNAE2095*0.1
LUSCchr646690685Missense_MutationnovelD853Y0.38
LUSCchr646690716Missense_MutationNAK863R0.33
LUSCchr646689098Nonsense_MutationNAG324*0.27
MESOchr646694096Missense_MutationnovelA1990T0.29
OVchr646690406Missense_MutationnovelP760S0.29
OVchr646690399SilentnovelE757E0.07
OVchr646689766Missense_MutationNAK546N0.14
OVchr646691411Missense_MutationnovelA1095S0.11
OVchr646690940Frame_Shift_DelnovelV938Wfs*40.11
OVchr646691883Missense_MutationnovelP1252L0.05
OVchr646689686Missense_MutationNAM520L0.22
OVchr6467018883'UTRnovel0.06
OVchr646688988Missense_MutationnovelY287F0.37
OVchr646691255Nonsense_MutationnovelK1043*0.06
OVchr646691254SilentNAA1042A0.19
OVchr646689694Frame_Shift_InsnovelF523Tfs*120.03
OVchr646688296SilentnovelT56T0.19
OVchr646692285Missense_MutationnovelQ1386R0.06
OVchr646693469Missense_MutationNAE1781K0.16
OVchr646694031Missense_MutationnovelT1968K0.07
OVchr646691054Missense_MutationNAF976L0.52
OVchr646689600Missense_Mutationrs144889394A491V0.51
OVchr646690245Missense_MutationnovelG706V0.18
OVchr646690651Missense_Mutationrs747359606I841M0.33
PAADchr646689832SilentnovelF568F0.21
PAADchr646694064Missense_MutationnovelF1979Y0.22
PRADchr646691018Missense_MutationnovelK964Q0.27
PRADchr646692356Missense_MutationNAI1410L0.3
PRADchr646693245Missense_MutationnovelA1706D0.26
PRADchr646693936SilentnovelC1936C0.24
READchr646694094Missense_Mutationrs150855637S1989L0.24
READchr646693352Missense_MutationnovelY1742N0.05
READchr646690950Missense_MutationnovelL941P0.05
READchr646701863Missense_MutationnovelR2089S0.25
READchr646690027SilentnovelI633I0.36
READchr6467019483'UTRrs7729264740.29
READchr646689230Nonsense_MutationNAR368*0.08
READchr646695878Missense_MutationnovelV2035G0.07
READchr646690871Frame_Shift_Insrs765467808N917Kfs*150.51
READchr646690206Missense_Mutationrs756938796T693M0.14
READchr646690562Missense_MutationNAT812A0.11
READchr646693128Missense_MutationNAI1667R0.38
READchr646694094Missense_Mutationrs150855637S1989L0.28
SARCchr646689544Missense_MutationnovelE472D0.27
SARCchr646688745Missense_MutationnovelR206H0.27
SARCchr646691498Missense_MutationnovelL1124V0.22
SARCchr646688229Missense_MutationNAG34E0.08
SKCMchr646689564Missense_MutationnovelR479K0.39
SKCMchr646689995Missense_MutationNAT623S0.39
SKCMchr646692424SilentnovelK1432K0.28
SKCMchr646688956SilentNAI276I0.38
SKCMchr646688995SilentNAG289G0.24
SKCMchr646690745SilentnovelL873L0.29
SKCMchr646695846SilentNAL2024L0.18
SKCMchr646692491Nonsense_MutationNAQ1455*0.19
SKCMchr646692831Missense_MutationNAP1568H0.35TUDOR
SKCMchr646689596Missense_MutationnovelD490N0.28
SKCMchr646693026Missense_MutationnovelP1633L0.27TUDOR
SKCMchr646693646Missense_MutationnovelS1840A0.27
SKCMchr646688660Missense_Mutationrs771639540R178C0.24
SKCMchr646690764Missense_MutationNAA879V0.23
SKCMchr646689615Frame_Shift_DelnovelN498Ifs*90.66
SKCMchr646693154Missense_MutationNAD1676N0.56
SKCMchr646689251Missense_MutationnovelP375S0.28
SKCMchr646689252Missense_Mutationrs774358111P375L0.28
SKCMchr646689981Missense_MutationNAS618F0.16
SKCMchr646692589SilentNAL1487L0.36
SKCMchr646690371Missense_MutationNAY748F0.23
SKCMchr646688599SilentNAF157F0.24
SKCMchr646690879Missense_MutationnovelN917K0.23
SKCMchr646693161Missense_MutationNAP1678L0.59
SKCMchr6467018923'UTRnovel0.49
SKCMchr646692624Missense_Mutationrs761838172S1499F0.24
SKCMchr646691882Missense_MutationnovelP1252S0.3
SKCMchr646691883Missense_MutationnovelP1252L0.28
SKCMchr646692561Missense_MutationNAA1478V0.18
SKCMchr646698036SilentNAN2070N0.14
SKCMchr646693888Missense_MutationNAM1920I0.28
SKCMchr646691619Missense_Mutationrs770534504R1164K0.41
SKCMchr646691925Missense_MutationNAP1266L0.34
SKCMchr646688802Missense_MutationNAP225L0.58
SKCMchr646688969Missense_MutationNAE281K0.33
SKCMchr646692955SilentNAE1609E0.45
SKCMchr646688796Missense_MutationnovelG223E0.46
SKCMchr646691474Nonsense_MutationnovelQ1116*0.18
SKCMchr646689702Missense_MutationNAS525F0.06
SKCMchr646690914Missense_MutationNAS929L0.25
SKCMchr646689466SilentNAV446V0.34
SKCMchr646691422SilentNAC1098C0.19
SKCMchr646689848Missense_MutationNAN574Y0.26
SKCMchr646692746Missense_MutationNAD1540N0.06TUDOR
SKCMchr646688599SilentNAF157F0.38
SKCMchr646688732Missense_MutationNAD202N0.22
STADchr646689245Missense_MutationnovelT373A0.52
STADchr646690872Frame_Shift_DelNAN917Ifs*20.43
STADchr646691001Missense_MutationNAR958I0.08
STADchr646689426Missense_Mutationrs551757424R433H0.34
STADchr646689842Nonsense_Mutationrs141346043R572*0.29
STADchr646690838Nonsense_MutationNAQ904*0.21
STADchr646691106Missense_Mutationrs369734344T993M0.19
STADchr646688761SilentNAR211R0.15
STADchr646693786Silentrs373939719G1886G0.17
STADchr646689874Silentrs143534526D582D0.08
STADchr646691256Missense_Mutationrs138212613K1043R0.34
STADchr646693094Nonsense_MutationNAE1656*0.33
STADchr646693696SilentNAL1856L0.48
STADchr646693654Missense_Mutationrs374899515D1842E0.06
STADchr646693986Missense_Mutationrs756088733R1953H0.42
STADchr646692449SilentNAR1441R0.22
STADchr646693108Missense_MutationnovelE1660D0.29
STADchr646688785SilentNAS219S0.15
STADchr646689568SilentNAS480S0.34
STADchr646692678Frame_Shift_InsnovelE1517Dfs*160.34TUDOR
STADchr646690601Missense_MutationNAA825P0.09
STADchr646689874Silentrs143534526D582D0.1
STADchr646690070Missense_Mutationrs781290826E648K0.36
STADchr646692519Missense_MutationNAD1464A0.39
STADchr646691257Missense_MutationNAK1043N0.09
STADchr646692000Missense_MutationnovelL1291P0.38
STADchr646693937Missense_MutationnovelT1937S0.27
STADchr646690127Missense_MutationNAK667E0.29
STADchr646691980Silentrs138496704S1284S0.29
STADchr646693650Missense_MutationNAP1841L0.31
STADchr646690330SilentNAT734T0.45
STADchr646689671Missense_MutationNAK515E0.11
STADchr646689278Missense_MutationNAG384S0.35
STADchr646694077Missense_MutationNAK1983N0.04
STADchr646691673Frame_Shift_DelnovelN1184Mfs*40.34
STADchr646689001SilentNAT291T0.18
STADchr646690207Silentrs377047426T693T0.44
STADchr646693593Missense_MutationNAH1822R0.18
STADchr646688812SilentNAS228S0.29
STADchr646691501Missense_MutationNAK1125Q0.27
STADchr646688756In_Frame_DelnovelE210_R211del0.13
STADchr646693334Missense_MutationnovelA1736P0.04
STADchr646691881Missense_MutationNAF1251L0.22
STADchr6467019263'UTRnovel0.15
STADchr646688636Missense_MutationNAV170I0.31
STADchr646690643Missense_MutationNAS839G0.42
STADchr646691825Missense_MutationnovelT1233S0.26
STADchr646691714Missense_MutationNAS1196R0.17
STADchr646689918Missense_Mutationrs750358200A597V0.19
TGCTchr646691972Missense_Mutationrs771080628G1282R0.19
TGCTchr646693935Missense_MutationnovelC1936Y0.1
THYMchr646689527Nonsense_Mutationrs753199824E467*0.14
THYMchr646688587SilentnovelD153D0.18
THYMchr646692413Frame_Shift_DelnovelN1430Ifs*50.22
UCECchr646688854Missense_Mutationrs146834898F242L0.3
UCECchr646690010Nonsense_MutationNAE628*0.3
UCECchr646690379Missense_Mutationrs759995668L751F0.3
UCECchr646690562Missense_MutationNAT812A0.35
UCECchr6467021063'UTRnovel0.37
UCECchr646689842Nonsense_Mutationrs141346043R572*0.34
UCECchr646693286Missense_MutationNAL1720I0.32
UCECchr646693170Missense_MutationnovelI1681S0.44
UCECchr646694088Missense_MutationnovelA1987V0.47
UCECchr646688433Missense_MutationnovelG102D0.18
UCECchr646688880Missense_MutationnovelT251M0.35
UCECchr646689230Nonsense_MutationNAR368*0.27
UCECchr646689612Missense_MutationNAF495C0.39
UCECchr646690793Missense_MutationNAQ889K0.31
UCECchr646692427Missense_MutationnovelK1433N0.12
UCECchr646693601Nonsense_MutationNAE1825*0.41
UCECchr6467020443'UTRnovel0.36
UCECchr646690158Missense_MutationnovelI677S0.3
UCECchr646690672Missense_MutationnovelN848K0.36
UCECchr646693230Missense_MutationnovelT1701I0.37
UCECchr646691759Missense_MutationNAE1211K0.36
UCECchr646690523Missense_MutationnovelK799E0.42
UCECchr646690887Nonsense_MutationnovelL920*0.42
UCECchr646690871Frame_Shift_Insrs765467808N917Kfs*150.46
UCECchr646693672Missense_MutationNAF1848L0.43
UCECchr646692003Missense_MutationnovelK1292T0.34
UCECchr646691107Silentrs760930520T993T0.31
UCECchr646689230Nonsense_MutationNAR368*0.41
UCECchr646690668Missense_MutationNAV847G0.16
UCECchr646691695SilentNAL1189L0.23
UCECchr646693602Missense_MutationNAE1825G0.22
UCECchr6467019013'UTRnovel0.04
UCECchr6467021333'UTRnovel0.21
UCECchr646690827Missense_MutationNAV900G0.08
UCECchr646689657Missense_Mutationrs772286906N510S0.46
UCECchr646691299Silentrs773466812K1057K0.45
UCECchr646693433Missense_Mutationrs369479623R1769C0.2
UCECchr6467021223'UTRnovel0.29
UCECchr646690173Missense_MutationNAH682R0.2
UCECchr646692574SilentnovelK1482K0.26
UCECchr646692034Missense_MutationNAM1302I0.46
UCECchr646689230Nonsense_MutationNAR368*0.48
UCECchr646693133Nonsense_MutationnovelE1669*0.55
UCECchr646693286Missense_MutationNAL1720I0.29
UCECchr646689956Missense_MutationnovelK610E0.5
UCECchr646688662SilentnovelR178R0.28
UCECchr646693433Missense_Mutationrs369479623R1769C0.2
UCECchr646692239Missense_Mutationrs753604587R1371C0.4
UCECchr646693475Missense_MutationnovelP1783S0.19
UCECchr646693980Missense_MutationnovelD1951G0.43
UCECchr646693686Missense_MutationnovelS1853Y0.21
UCECchr646689360Missense_MutationnovelF411C0.33
UCECchr646690028Missense_MutationnovelL634F0.33
UCECchr646688941Silentrs767171983S271S0.34
UCECchr646689444Missense_MutationnovelS439L0.15
UCECchr646689567Missense_MutationnovelS480Y0.56
UCECchr646691223Missense_MutationnovelS1032Y0.58
UCECchr646701026Intronnovel0.29
UCECchr646693010Missense_MutationnovelP1628S0.5TUDOR
UCECchr646688663SilentnovelL179L0.43
UCECchr646694141Missense_MutationnovelK2005E0.55
UCECchr646691413SilentNAA1095A0.37
UCECchr646692434Missense_MutationnovelH1436Y0.08
UCECchr646689507Missense_MutationnovelS460Y0.38
UCECchr646690745Missense_MutationnovelL873M0.6
UCECchr646693373Missense_MutationnovelE1749K0.42
UCECchr646690794Missense_MutationnovelQ889R0.42
UCECchr646693871Missense_MutationnovelP1915S0.17
UCECchr646692163Silentrs750220784P1345P0.39
UCECchr646693560Missense_Mutationrs796584974Y1811C0.35
UCECchr646689592Missense_MutationnovelF488L0.22
UCECchr646691225Missense_MutationnovelP1033S0.14
UCECchr646693672Missense_MutationNAF1848L0.31
UCECchr646691365SilentnovelL1079L0.35
UCECchr646701870Missense_MutationnovelE2092K0.36
UCECchr646693438SilentnovelD1770D0.29
UCECchr646690902Missense_MutationnovelF925S0.37
UCECchr646692426Missense_MutationnovelK1433T0.39
UCECchr646694057Nonsense_MutationnovelE1977*0.5
UCECchr646690872Frame_Shift_DelNAN917Ifs*20.28
UCECchr646688785SilentNAS219S0.29
UCECchr646692696Missense_MutationnovelA1523V0.29TUDOR
UCECchr646688772Missense_MutationnovelA215V0.55
UCECchr646690464Missense_MutationnovelS779Y0.42
UCECchr646694127Missense_MutationnovelS2000I0.5
UCECchr646690327SilentnovelS733S0.51
UCECchr646691338Missense_MutationnovelI1070M0.49
UCECchr646690710Missense_MutationNAS861Y0.25
UCECchr646692288Missense_MutationNAF1387C0.26
UCECchr646689203Missense_MutationnovelL359F0.24
UCECchr646693021SilentnovelA1631A0.26
UCECchr646690463Missense_MutationnovelS779P0.08
UCECchr646692457Silentrs747635902S1443S0.33
UCECchr6467021233'UTRnovel0.42
UCECchr646689337Missense_MutationnovelK403N0.11
UCECchr646690871Frame_Shift_Insrs765467808N917Kfs*150.35
UCECchr646690089Frame_Shift_DelnovelN655Tfs*50.27
UCECchr646690799Missense_MutationnovelV891I0.28
UCECchr646689847SilentNAG573G0.27
UCECchr646693971Missense_MutationNAS1948Y0.45
UCECchr646693171Silentrs778214857I1681I0.46
UCECchr646690064Missense_MutationNAL646I0.29
UCECchr646690880Missense_Mutationrs746576872L918I0.34
UCECchr646688587SilentnovelD153D0.46
UCECchr646690876Missense_MutationNAK916N0.32
UCECchr646692799Missense_MutationNAQ1557H0.28TUDOR
UCECchr646693697Nonsense_MutationNAQ1857*0.33
UCECchr646690285SilentnovelV719V0.22
UCECchr646690693SilentnovelG855G0.26
UCECchr646688813Nonsense_MutationnovelR229*0.31
UCECchr646689398Missense_Mutationrs533366956Y424H0.41
UCECchr646691644SilentnovelV1172V0.39
UCECchr646693234SilentnovelG1702G0.21
UCECchr646694167SilentnovelH2013H0.19
UCECchr646689794Missense_MutationnovelI556L0.37
UCECchr646691880Missense_MutationNAF1251C0.24
UCECchr646689874Silentrs143534526D582D0.35
UCECchr646690837Missense_MutationnovelI903M0.39
UCECchr646690945SilentnovelD939D0.32
UCECchr646690448Missense_MutationnovelV774L0.41
UCECchr646690701Missense_MutationnovelE858A0.33
UCECchr646693884Missense_MutationnovelK1919T0.43
UCSchr646691456Nonsense_MutationnovelE1110*0.34
UCSchr646693068Missense_MutationNAS1647Y0.34

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
KIRPDEL0.07640.11427

Survival Analysis
CancerP-value Q-value
KIRC0.038

Kaplan-Meier Survival Analysis

SARC0.018

Kaplan-Meier Survival Analysis

ACC0.011

Kaplan-Meier Survival Analysis

HNSC0.049

Kaplan-Meier Survival Analysis

SKCM0.00081

Kaplan-Meier Survival Analysis

KIRP0.048

Kaplan-Meier Survival Analysis

PAAD0.0014

Kaplan-Meier Survival Analysis

BLCA0.0078

Kaplan-Meier Survival Analysis

CESC0.017

Kaplan-Meier Survival Analysis

LUAD0.0045

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000180113 (Gene tree)
Gene ID
221400
Gene Symbol
TDRD6
Alias
NY-CO-45|bA446F17.4|CT41.2|SPATA36
Full Name
tudor domain containing 6
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
16,445 bases
Position
chr6:46,687,875-46,704,319
Accession
21339
RBP type
canonical RBP
Summary
This gene encodes a tudor domain-containing protein and component of the chromatoid body, a type of ribonucleoprotein granule present in male germ cells. Studies in rodents have demonstrated a role for the encoded protein in spermiogenesis and the nonsense mediated decay (NMD) pathway. This protein is a major autoantigen in human patients with autoimmune polyendocrine syndrome type 1 (APS1). [provided by RefSeq, Oct 2016]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000346065TUDORPF00567.247.3e-15917
ENSP00000346065TUDORPF00567.247.3e-15927
ENSP00000346065TUDORPF00567.247.3e-15937
ENSP00000346065TUDORPF00567.247.3e-15947
ENSP00000346065TUDORPF00567.247.3e-15957
ENSP00000346065TUDORPF00567.247.3e-15967
ENSP00000346065TUDORPF00567.247.3e-15977
ENSP00000443299TUDORPF00567.246.8e-15717
ENSP00000443299TUDORPF00567.246.8e-15727
ENSP00000443299TUDORPF00567.246.8e-15737
ENSP00000443299TUDORPF00567.246.8e-15747
ENSP00000443299TUDORPF00567.246.8e-15757
ENSP00000443299TUDORPF00567.246.8e-15767
ENSP00000443299TUDORPF00567.246.8e-15777

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
23938467Linking spermatid ribonucleic acid (RNA) binding protein and retrogene diversity to reproductive success.Mol Cell Proteomics2013 NovChapman KMdoi: 10.1074/mcp.M113.030585
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000316081TDRD6-2016817-ENSP000003460652096 (aa)-O60522
ENST00000450697TDRD6-202583-ENSP00000397165175 (aa)-H0Y590
ENST00000544460TDRD6-2038887-ENSP000004432992066 (aa)-O60522
Gene Model
Click here to download ENSG00000180113's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000180113Blood Pressure1.9076735E-005-
ENSG00000180113Arterial Pressure2.1762496E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000180113's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000180113TDRD68432.617ENSAPOG00000023805tdrd68632.617Acanthochromis_polyacanthus
ENSG00000180113TDRD69978.967ENSAMEG00000001687TDRD69978.967Ailuropoda_melanoleuca
ENSG00000180113TDRD68332.273ENSACIG00000009194-9932.273Amphilophus_citrinellus
ENSG00000180113TDRD67835.171ENSACIG00000012633-9735.185Amphilophus_citrinellus
ENSG00000180113TDRD68235.786ENSAOCG00000013365tdrd67335.786Amphiprion_ocellaris
ENSG00000180113TDRD68432.994ENSAPEG00000015328tdrd68532.994Amphiprion_percula
ENSG00000180113TDRD68232.362ENSATEG00000016586tdrd68232.362Anabas_testudineus
ENSG00000180113TDRD67933.990ENSATEG00000001389si:ch211-189e2.39833.990Anabas_testudineus
ENSG00000180113TDRD68242.222ENSACAG00000013170TDRD69942.393Anolis_carolinensis
ENSG00000180113TDRD610089.619ENSANAG00000004725TDRD610089.619Aotus_nancymaae
ENSG00000180113TDRD68332.544ENSACLG00000003092-9932.544Astatotilapia_calliptera
ENSG00000180113TDRD68232.819ENSACLG00000007717-8332.819Astatotilapia_calliptera
ENSG00000180113TDRD68135.878ENSAMXG00000010029tdrd67135.878Astyanax_mexicanus
ENSG00000180113TDRD68032.738ENSAMXG00000032110si:ch211-189e2.39932.738Astyanax_mexicanus
ENSG00000180113TDRD610076.093ENSBTAG00000009978TDRD610076.331Bos_taurus
ENSG00000180113TDRD610088.910ENSCJAG00000012035TDRD610088.910Callithrix_jacchus
ENSG00000180113TDRD610079.325ENSCAFG00000002036TDRD610079.420Canis_familiaris
ENSG00000180113TDRD69979.179ENSCAFG00020012649TDRD69979.274Canis_lupus_dingo
ENSG00000180113TDRD610076.663ENSCHIG00000012400TDRD610076.806Capra_hircus
ENSG00000180113TDRD69975.489ENSTSYG00000007971TDRD69975.584Carlito_syrichta
ENSG00000180113TDRD69162.893ENSCPOG00000015698TDRD69663.568Cavia_porcellus
ENSG00000180113TDRD610090.580ENSCCAG00000027454TDRD610090.580Cebus_capucinus
ENSG00000180113TDRD610094.925ENSCATG00000023914TDRD610094.925Cercocebus_atys
ENSG00000180113TDRD69464.563ENSCLAG00000009187TDRD69464.563Chinchilla_lanigera
ENSG00000180113TDRD610094.569ENSCSAG00000012578TDRD610094.569Chlorocebus_sabaeus
ENSG00000180113TDRD69187.179ENSCHOG00000000169TDRD69187.179Choloepus_hoffmanni
ENSG00000180113TDRD68845.865ENSCPBG00000021664TDRD69544.661Chrysemys_picta_bellii
ENSG00000180113TDRD610094.055ENSCANG00000030562TDRD610094.055Colobus_angolensis_palliatus
ENSG00000180113TDRD69973.337ENSCGRG00001017798Tdrd69773.432Cricetulus_griseus_chok1gshd
ENSG00000180113TDRD69272.345ENSCGRG00000011547Tdrd69872.447Cricetulus_griseus_crigri
ENSG00000180113TDRD68631.573ENSCSEG00000019023tdrd68131.591Cynoglossus_semilaevis
ENSG00000180113TDRD68333.447ENSDARG00000070052tdrd67733.447Danio_rerio
ENSG00000180113TDRD610078.140ENSDNOG00000042799TDRD610078.187Dasypus_novemcinctus
ENSG00000180113TDRD69969.737ENSDORG00000023218Tdrd69969.833Dipodomys_ordii
ENSG00000180113TDRD610067.376ENSETEG00000015260TDRD69967.486Echinops_telfairi
ENSG00000180113TDRD69980.057ENSECAG00000024889TDRD69880.153Equus_caballus
ENSG00000180113TDRD67585.962ENSEEUG00000010497-5686.435Erinaceus_europaeus
ENSG00000180113TDRD68234.223ENSELUG00000018873-9931.125Esox_lucius
ENSG00000180113TDRD69931.407ENSELUG00000010350tdrd69031.407Esox_lucius
ENSG00000180113TDRD69978.367ENSFCAG00000023001TDRD69978.473Felis_catus
ENSG00000180113TDRD69241.585ENSFALG00000001522TDRD68441.585Ficedula_albicollis
ENSG00000180113TDRD69363.190ENSFDAG00000005622TDRD69465.222Fukomys_damarensis
ENSG00000180113TDRD68231.009ENSFHEG00000022915tdrd67431.009Fundulus_heteroclitus
ENSG00000180113TDRD67832.881ENSGMOG00000005132tdrd69933.051Gadus_morhua
ENSG00000180113TDRD68453.488ENSGALG00000044279-6953.488Gallus_gallus
ENSG00000180113TDRD68731.129ENSGAFG00000009328tdrd67731.129Gambusia_affinis
ENSG00000180113TDRD68631.092ENSGACG00000004820tdrd69931.092Gasterosteus_aculeatus
ENSG00000180113TDRD69044.833ENSGAGG00000019966TDRD69743.882Gopherus_agassizii
ENSG00000180113TDRD610098.236ENSGGOG00000012971TDRD610098.236Gorilla_gorilla
ENSG00000180113TDRD68232.551ENSHBUG00000012579tdrd67832.551Haplochromis_burtoni
ENSG00000180113TDRD68332.544ENSHBUG00000000351-9932.544Haplochromis_burtoni
ENSG00000180113TDRD69966.262ENSHGLG00000019324TDRD69866.378Heterocephalus_glaber_female
ENSG00000180113TDRD69966.262ENSHGLG00100006669TDRD69866.378Heterocephalus_glaber_male
ENSG00000180113TDRD68232.830ENSIPUG00000023805tdrd67832.772Ictalurus_punctatus
ENSG00000180113TDRD69980.229ENSSTOG00000028193TDRD69980.229Ictidomys_tridecemlineatus
ENSG00000180113TDRD69971.208ENSJJAG00000022534Tdrd69771.110Jaculus_jaculus
ENSG00000180113TDRD66833.937ENSKMAG00000003969-8833.937Kryptolebias_marmoratus
ENSG00000180113TDRD68232.275ENSKMAG00000015790-9932.275Kryptolebias_marmoratus
ENSG00000180113TDRD68632.191ENSLBEG00000022955tdrd68432.191Labrus_bergylta
ENSG00000180113TDRD68242.726ENSLACG00000010837TDRD610042.726Latimeria_chalumnae
ENSG00000180113TDRD68234.636ENSLOCG00000016482tdrd69934.636Lepisosteus_oculatus
ENSG00000180113TDRD69977.682ENSLAFG00000025617TDRD69977.682Loxodonta_africana
ENSG00000180113TDRD610094.780ENSMFAG00000002656TDRD610094.780Macaca_fascicularis
ENSG00000180113TDRD610094.828ENSMMUG00000019252TDRD610094.828Macaca_mulatta
ENSG00000180113TDRD610094.973ENSMNEG00000039397TDRD610094.973Macaca_nemestrina
ENSG00000180113TDRD69594.548ENSMLEG00000039418TDRD610094.548Mandrillus_leucophaeus
ENSG00000180113TDRD68232.326ENSMAMG00000000227-9932.326Mastacembelus_armatus
ENSG00000180113TDRD68332.227ENSMAMG00000007725tdrd68232.227Mastacembelus_armatus
ENSG00000180113TDRD68232.666ENSMZEG00005003573tdrd67832.666Maylandia_zebra
ENSG00000180113TDRD68332.544ENSMZEG00005012754-9932.544Maylandia_zebra
ENSG00000180113TDRD69836.881ENSMGAG00000014281-10037.537Meleagris_gallopavo
ENSG00000180113TDRD69972.693ENSMAUG00000001192Tdrd69872.788Mesocricetus_auratus
ENSG00000180113TDRD69979.191ENSMICG00000030777TDRD69882.467Microcebus_murinus
ENSG00000180113TDRD69972.103ENSMOCG00000005983Tdrd69972.082Microtus_ochrogaster
ENSG00000180113TDRD68231.934ENSMMOG00000015651tdrd68531.934Mola_mola
ENSG00000180113TDRD69966.200ENSMODG00000018889TDRD69566.400Monodelphis_domestica
ENSG00000180113TDRD68431.591ENSMALG00000019184-9931.686Monopterus_albus
ENSG00000180113TDRD67933.954ENSMALG00000019679tdrd67833.954Monopterus_albus
ENSG00000180113TDRD69972.013MGP_CAROLIEiJ_G0021632Tdrd69872.013Mus_caroli
ENSG00000180113TDRD69983.364ENSMUSG00000040140Tdrd69883.364Mus_musculus
ENSG00000180113TDRD69971.354MGP_PahariEiJ_G0020624Tdrd69871.354Mus_pahari
ENSG00000180113TDRD69971.945MGP_SPRETEiJ_G0022544Tdrd69871.945Mus_spretus
ENSG00000180113TDRD69979.671ENSMPUG00000012444TDRD69979.571Mustela_putorius_furo
ENSG00000180113TDRD69972.164ENSMLUG00000015316TDRD69872.545Myotis_lucifugus
ENSG00000180113TDRD69973.546ENSNGAG00000024357Tdrd69973.702Nannospalax_galili
ENSG00000180113TDRD67634.975ENSNBRG00000018258tdrd68834.975Neolamprologus_brichardi
ENSG00000180113TDRD68331.953ENSNBRG00000007041-9931.953Neolamprologus_brichardi
ENSG00000180113TDRD69995.391