EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
28978646	Lactate-mediated mitoribosomal defects impair mitochondrial oxidative phosphorylation and promote hepatoma cell invasiveness.	J Biol Chem	2017 Dec 8	Lee YK	doi: 10.1074/jbc.M117.809012

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr8	120414060	Missense_Mutation	rs367814802	R149Q	0.09
BRCA	chr8	120443218	Missense_Mutation	NA	Q40E	0.48	Ribosomal_L13
BRCA	chr8	120445355	5'UTR	novel		0.21
BRCA	chr8	120419875	Missense_Mutation	NA	R124G	0.19
BRCA	chr8	120445122	5'UTR	novel		0.16
COAD	chr8	120419901	Frame_Shift_Del	NA	*N115Tfs7**	0.27	Ribosomal_L13
COAD	chr8	120445211	5'UTR	novel		0.55
COAD	chr8	120445291	5'UTR	novel		0.67
COAD	chr8	120414100	Missense_Mutation	novel	D136N	0.14
COAD	chr8	120419938	Missense_Mutation	novel	I103V	0.07	Ribosomal_L13
COAD	chr8	120419911	Silent	NA	L112L	0.29
COAD	chr8	120432042	Missense_Mutation	NA	S78F	0.31	Ribosomal_L13
COAD	chr8	120396044	3'UTR	novel		0.36
COAD	chr8	120414084	Frame_Shift_Ins	novel	*L141Cfs3**	0.04
ESCA	chr8	120443228	Silent	NA	S36S	0.14
GBM	chr8	120396058	3'UTR	novel		0.39
GBM	chr8	120419929	Frame_Shift_Ins	novel	*L106Tfs26**	0.27	Ribosomal_L13
HNSC	chr8	120445257	5'UTR	novel		0.35
KIRP	chr8	120443256	Missense_Mutation	novel	P27L	0.32	Ribosomal_L13
KIRP	chr8	120445097	5'UTR	novel		0.45
LGG	chr8	120414105	In_Frame_Ins	novel	P134delinsHMVEET	0.19
LGG	chr8	120414106	Nonsense_Mutation	novel	P134*	0.19
LIHC	chr8	120443227	Missense_Mutation	rs145547223	I37V	0.15	Ribosomal_L13
LIHC	chr8	120432054	Missense_Mutation	NA	Q74R	0.11	Ribosomal_L13
LUAD	chr8	120445090	Nonsense_Mutation	novel	S2*	0.13	Ribosomal_L13
LUAD	chr8	120445073	Missense_Mutation	NA	P8S	0.11	Ribosomal_L13
LUAD	chr8	120432058	Missense_Mutation	novel	E73Q	0.28	Ribosomal_L13
LUAD	chr8	120432060	Missense_Mutation	novel	W72L	0.29	Ribosomal_L13
LUAD	chr8	120425312	Silent	novel	P100P	0.46
LUSC	chr8	120419939	Splice_Site	novel	X103_splice	0.17
LUSC	chr8	120445177	5'UTR	novel		0.24
OV	chr8	120419869	Missense_Mutation	novel	H126Y	0.71
OV	chr8	120419870	Missense_Mutation	novel	L125F	0.71
OV	chr8	120395947	3'UTR	novel		0.26
PAAD	chr8	120414043	Silent	novel	L155L	0.19
PCPG	chr8	120419885	Silent	novel	T120T	0.31
PRAD	chr8	120414096	Missense_Mutation	novel	I137S	0.25
PRAD	chr8	120419915	Silent	novel	G110G	0.35
READ	chr8	120432124	Splice_Site	NA	X51_splice	0.18
READ	chr8	120425343	Missense_Mutation	NA	V90G	0.34	Ribosomal_L13
READ	chr8	120396101	3'UTR	novel		0.27
SKCM	chr8	120445358	5'UTR	novel		0.57
SKCM	chr8	120414081	Missense_Mutation	NA	V142A	0.55
SKCM	chr8	120445272	5'UTR	novel		0.38
SKCM	chr8	120413992	Missense_Mutation	rs745611473	P172S	0.34
SKCM	chr8	120445072	Missense_Mutation	novel	P8L	0.18	Ribosomal_L13
SKCM	chr8	120445073	Missense_Mutation	NA	P8S	0.18	Ribosomal_L13
SKCM	chr8	120445307	5'UTR	novel		0.54
SKCM	chr8	120425349	Missense_Mutation	novel	R88K	0.04	Ribosomal_L13
SKCM	chr8	120445306	5'UTR	novel		0.26
SKCM	chr8	120413991	Missense_Mutation	rs781110831	P172L	0.25
STAD	chr8	120445174	5'UTR	novel		0.11
STAD	chr8	120414034	Missense_Mutation	NA	Y158H	0.08
STAD	chr8	120445318	5'UTR	novel		0.19
STAD	chr8	120445315	5'UTR	novel		0.19
STAD	chr8	120445316	5'UTR	novel		0.19
UCEC	chr8	120396124	Missense_Mutation	novel	P173S	0.56
UCEC	chr8	120443258	Missense_Mutation	novel	Q26H	0.12	Ribosomal_L13
UCEC	chr8	120432093	Missense_Mutation	novel	N61S	0.53	Ribosomal_L13
UCEC	chr8	120395994	3'UTR	novel		0.18
UCEC	chr8	120445128	5'UTR	novel		0.59
UCEC	chr8	120445266	5'UTR	NA		0.73
UCEC	chr8	120395951	3'UTR	rs780074240		0.36

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
DLBC	AMP	0.2083	0.018626
KIRC	AMP	0.1174	0.15559
LGG	AMP	0.1676	6.7949e-16
LIHC	AMP	0.6081	1.1795e-21
SARC	AMP	0.2646	0.18425
SKCM	AMP	0.4469	2.8957e-05
TGCT	AMP	0.5867	0.13696
THCA	DEL	0.01	0.038162
UVM	AMP	0.7375	8.8879e-13

Survival Analysis

Cancer	P-value	Q-value
HNSC	0.034	Kaplan-Meier Survival Analysis
SKCM	0.0069	Kaplan-Meier Survival Analysis
BRCA	0.0002	Kaplan-Meier Survival Analysis
ESCA	0.0029	Kaplan-Meier Survival Analysis
PAAD	0.0002	Kaplan-Meier Survival Analysis
KICH	0.016	Kaplan-Meier Survival Analysis
UCEC	0.01	Kaplan-Meier Survival Analysis
LIHC	0.0014	Kaplan-Meier Survival Analysis
LGG	0.00014	Kaplan-Meier Survival Analysis
LUAD	0.00037	Kaplan-Meier Survival Analysis
UVM	0.00065	Kaplan-Meier Survival Analysis
OV	0.03	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathway

Phenotype

PPI

Ortholog

Gene Ontology

Description

Ensembl ID: ENSG00000172172 (Gene tree)
Gene ID: 28998
Gene Symbol: MRPL13
Alias: L13|RPL13|L13mt|RPML13|L13A
Full Name: mitochondrial ribosomal protein L13
Gene Type: protein_coding
Specie: Homo_sapiens
Strand: Minus strand
Length: 64,647 bases
Position: chr8:120,380,761-120,445,407
Accession: 14278
Summary: Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. [provided by RefSeq, Jul 2008]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000306548	Ribosomal_L13	PF00572.18	8.6e-45	1	1
ENSP00000430545	Ribosomal_L13	PF00572.18	3e-41	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	polyT & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	PolyT & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000520677	MRPL13-204	500	-	-	- (aa)	-	-
ENST00000613356	MRPL13-207	2367	-	-	- (aa)	-	-
ENST00000518918	MRPL13-203	633	-	ENSP00000430545	147 (aa)	-	E5RJI7
ENST00000306185	MRPL13-201	1086	-	ENSP00000306548	178 (aa)	-	Q9BYD1
ENST00000521648	MRPL13-205	703	-	ENSP00000428229	47 (aa)	-	H0YAX3
ENST00000518696	MRPL13-202	1418	-	ENSP00000428867	58 (aa)	-	E5RFI2
ENST00000522717	MRPL13-206	480	-	-	- (aa)	-	-

Gene Model

Click here to download 's gene model file

Pathway

Pathway ID	Pathway Name	Source
hsa03010	Ribosome	KEGG

Phenotype

ensgID	Trait	pValue	Pubmed ID
ENSG00000172172	Coronary Artery Disease	2.4340000E-005	-

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000172172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy	Species
ENSG00000172172	MRPL13	100	81.633	ENSAPOG00000004881	mrpl13	99	79.775	Acanthochromis_polyacanthus
ENSG00000172172	MRPL13	100	90.449	ENSAMEG00000002225	MRPL13	100	90.449	Ailuropoda_melanoleuca
ENSG00000172172	MRPL13	100	78.231	ENSACIG00000011101	mrpl13	99	76.404	Amphilophus_citrinellus
ENSG00000172172	MRPL13	100	80.272	ENSAOCG00000001749	mrpl13	99	78.652	Amphiprion_ocellaris
ENSG00000172172	MRPL13	100	80.272	ENSAPEG00000019583	mrpl13	99	78.652	Amphiprion_percula
ENSG00000172172	MRPL13	100	80.272	ENSATEG00000023882	mrpl13	99	77.528	Anabas_testudineus
ENSG00000172172	MRPL13	100	84.354	ENSACAG00000009255	MRPL13	81	81.977	Anolis_carolinensis
ENSG00000172172	MRPL13	98	100.000	ENSANAG00000033601	MRPL13	100	96.629	Aotus_nancymaae
ENSG00000172172	MRPL13	100	79.592	ENSACLG00000013200	mrpl13	99	78.090	Astatotilapia_calliptera
ENSG00000172172	MRPL13	100	85.034	ENSAMXG00000041931	mrpl13	99	82.584	Astyanax_mexicanus
ENSG00000172172	MRPL13	100	89.888	ENSBTAG00000006767	MRPL13	100	89.888	Bos_taurus
ENSG00000172172	MRPL13	95	39.645	WBGene00008769	mrpl-13	82	39.645	Caenorhabditis_elegans
ENSG00000172172	MRPL13	100	95.918	ENSCJAG00000023047	-	100	94.944	Callithrix_jacchus
ENSG00000172172	MRPL13	100	96.599	ENSCJAG00000005359	-	100	95.506	Callithrix_jacchus
ENSG00000172172	MRPL13	100	91.011	ENSCAFG00000000940	MRPL13	100	91.011	Canis_familiaris
ENSG00000172172	MRPL13	100	89.796	ENSCAFG00020005790	MRPL13	100	90.698	Canis_lupus_dingo
ENSG00000172172	MRPL13	100	89.796	ENSCHIG00000024054	-	100	89.535	Capra_hircus
ENSG00000172172	MRPL13	100	85.955	ENSCHIG00000013190	-	100	85.955	Capra_hircus
ENSG00000172172	MRPL13	98	82.609	ENSCHIG00000008412	-	85	74.719	Capra_hircus
ENSG00000172172	MRPL13	100	74.830	ENSCHIG00000006914	-	98	75.000	Capra_hircus
ENSG00000172172	MRPL13	86	88.889	ENSTSYG00000011331	MRPL13	88	89.344	Carlito_syrichta
ENSG00000172172	MRPL13	100	87.755	ENSCAPG00000006896	MRPL13	100	88.757	Cavia_aperea
ENSG00000172172	MRPL13	100	89.326	ENSCPOG00000005791	MRPL13	100	89.326	Cavia_porcellus
ENSG00000172172	MRPL13	100	96.067	ENSCCAG00000034544	MRPL13	100	96.067	Cebus_capucinus
ENSG00000172172	MRPL13	100	98.876	ENSCATG00000044803	MRPL13	100	98.876	Cercocebus_atys
ENSG00000172172	MRPL13	100	89.888	ENSCLAG00000005646	MRPL13	100	89.888	Chinchilla_lanigera
ENSG00000172172	MRPL13	100	98.876	ENSCSAG00000010722	MRPL13	100	98.876	Chlorocebus_sabaeus
ENSG00000172172	MRPL13	98	73.913	ENSCHOG00000006926	MRPL13	100	70.718	Choloepus_hoffmanni
ENSG00000172172	MRPL13	100	85.714	ENSCPBG00000015289	MRPL13	64	83.051	Chrysemys_picta_bellii
ENSG00000172172	MRPL13	99	50.336	ENSCING00000005447	-	98	50.562	Ciona_intestinalis
ENSG00000172172	MRPL13	100	98.639	ENSCANG00000041741	MRPL13	100	98.315	Colobus_angolensis_palliatus
ENSG00000172172	MRPL13	100	92.135	ENSCGRG00001015700	Mrpl13	100	92.135	Cricetulus_griseus_chok1gshd
ENSG00000172172	MRPL13	95	85.455	ENSCGRG00000018038	Mrpl13	100	94.118	Cricetulus_griseus_crigri
ENSG00000172172	MRPL13	100	79.592	ENSCSEG00000005024	mrpl13	99	77.528	Cynoglossus_semilaevis
ENSG00000172172	MRPL13	99	77.397	ENSCVAG00000019608	mrpl13	99	75.843	Cyprinodon_variegatus
ENSG00000172172	MRPL13	98	82.609	ENSDARG00000056903	mrpl13	99	77.528	Danio_rerio
ENSG00000172172	MRPL13	100	90.476	ENSDNOG00000046226	MRPL13	100	90.449	Dasypus_novemcinctus
ENSG00000172172	MRPL13	100	92.135	ENSDORG00000016654	Mrpl13	100	92.135	Dipodomys_ordii
ENSG00000172172	MRPL13	99	47.159	FBgn0032720	mRpL13	99	47.159	Drosophila_melanogaster
ENSG00000172172	MRPL13	83	89.583	ENSETEG00000017682	MRPL13	100	58.427	Echinops_telfairi
ENSG00000172172	MRPL13	95	69.091	ENSEBUG00000007958	-	85	61.842	Eptatretus_burgeri
ENSG00000172172	MRPL13	98	86.957	ENSEASG00005002544	-	100	88.235	Equus_asinus_asinus
ENSG00000172172	MRPL13	100	92.697	ENSECAG00000021161	MRPL13	100	92.697	Equus_caballus
ENSG00000172172	MRPL13	98	89.130	ENSEEUG00000006391	MRPL13	100	80.337	Erinaceus_europaeus
ENSG00000172172	MRPL13	100	77.551	ENSELUG00000023304	mrpl13	99	75.843	Esox_lucius
ENSG00000172172	MRPL13	100	90.449	ENSFCAG00000001463	MRPL13	100	90.449	Felis_catus
ENSG00000172172	MRPL13	100	78.912	ENSFALG00000002422	MRPL13	99	78.431	Ficedula_albicollis
ENSG00000172172	MRPL13	100	86.517	ENSFDAG00000006554	MRPL13	100	86.517	Fukomys_damarensis
ENSG00000172172	MRPL13	99	77.397	ENSFHEG00000001907	mrpl13	99	75.843	Fundulus_heteroclitus
ENSG00000172172	MRPL13	94	78.986	ENSGMOG00000004838	mrpl13	100	78.986	Gadus_morhua
ENSG00000172172	MRPL13	100	79.592	ENSGALG00000041863	MRPL13	98	77.841	Gallus_gallus
ENSG00000172172	MRPL13	99	78.082	ENSGAFG00000002007	mrpl13	99	76.404	Gambusia_affinis
ENSG00000172172	MRPL13	94	80.435	ENSGACG00000007061	mrpl13	99	80.000	Gasterosteus_aculeatus
ENSG00000172172	MRPL13	100	87.075	ENSGAGG00000025331	-	99	84.746	Gopherus_agassizii
ENSG00000172172	MRPL13	98	100.000	ENSGGOG00000024629	MRPL13	100	87.079	Gorilla_gorilla
ENSG00000172172	MRPL13	100	80.272	ENSHBUG00000012259	mrpl13	99	78.652	Haplochromis_burtoni
ENSG00000172172	MRPL13	100	87.755	ENSHGLG00000007021	MRPL13	100	87.640	Heterocephalus_glaber_female
ENSG00000172172	MRPL13	100	87.755	ENSHGLG00100016348	MRPL13	100	87.640	Heterocephalus_glaber_male
ENSG00000172172	MRPL13	100	78.912	ENSHCOG00000012037	mrpl13	99	76.966	Hippocampus_comes
ENSG00000172172	MRPL13	100	78.912	ENSIPUG00000009071	mrpl13	99	78.652	Ictalurus_punctatus
ENSG00000172172	MRPL13	100	91.011	ENSSTOG00000014264	MRPL13	100	91.011	Ictidomys_tridecemlineatus
ENSG00000172172	MRPL13	100	88.435	ENSJJAG00000019308	Mrpl13	100	88.202	Jaculus_jaculus
ENSG00000172172	MRPL13	100	80.952	ENSKMAG00000018091	mrpl13	99	78.652	Kryptolebias_marmoratus
ENSG00000172172	MRPL13	100	78.912	ENSLBEG00000006340	mrpl13	99	77.528	Labrus_bergylta
ENSG00000172172	MRPL13	100	85.034	ENSLACG00000015467	MRPL13	98	81.977	Latimeria_chalumnae
ENSG00000172172	MRPL13	100	80.272	ENSLOCG00000009210	mrpl13	99	78.090	Lepisosteus_oculatus
ENSG00000172172	MRPL13	100	93.197	ENSLAFG00000012985	MRPL13	99	88.636	Loxodonta_africana
ENSG00000172172	MRPL13	100	98.876	ENSMFAG00000009755	MRPL13	100	98.876	Macaca_fascicularis
ENSG00000172172	MRPL13	100	98.876	ENSMMUG00000002599	MRPL13	100	98.876	Macaca_mulatta
ENSG00000172172	MRPL13	100	98.876	ENSMNEG00000034159	MRPL13	100	98.876	Macaca_nemestrina
ENSG00000172172	MRPL13	100	98.876	ENSMLEG00000009613	MRPL13	100	98.876	Mandrillus_leucophaeus
ENSG00000172172	MRPL13	100	80.952	ENSMAMG00000023991	mrpl13	99	78.652	Mastacembelus_armatus
ENSG00000172172	MRPL13	100	79.592	ENSMZEG00005025500	mrpl13	99	78.090	Maylandia_zebra
ENSG00000172172	MRPL13	85	92.500	ENSMAUG00000009122	-	100	92.857	Mesocricetus_auratus
ENSG00000172172	MRPL13	98	91.304	ENSMAUG00000015546	-	99	85.795	Mesocricetus_auratus
ENSG00000172172	MRPL13	100	93.258	ENSMICG00000014630	MRPL13	100	93.258	Microcebus_murinus
ENSG00000172172	MRPL13	100	91.573	ENSMOCG00000018794	Mrpl13	100	91.573	Microtus_ochrogaster
ENSG00000172172	MRPL13	100	80.952	ENSMMOG00000008934	mrpl13	99	79.213	Mola_mola
ENSG00000172172	MRPL13	100	92.517	ENSMODG00000002300	MRPL13	100	91.011	Monodelphis_domestica
ENSG00000172172	MRPL13	100	80.952	ENSMALG00000008122	mrpl13	100	78.363	Monopterus_albus
ENSG00000172172	MRPL13	100	89.116	MGP_CAROLIEiJ_G0019799	Mrpl13	100	90.816	Mus_caroli
ENSG00000172172	MRPL13	100	89.796	ENSMUSG00000022370	Mrpl13	100	91.837	Mus_musculus
ENSG00000172172	MRPL13	100	91.156	MGP_PahariEiJ_G0019809	Mrpl13	100	92.857	Mus_pahari
ENSG00000172172	MRPL13	100	89.796	MGP_SPRETEiJ_G0020696	Mrpl13	100	91.837	Mus_spretus
ENSG00000172172	MRPL13	100	89.116	ENSMPUG00000001080	MRPL13	98	89.143	Mustela_putorius_furo
ENSG00000172172	MRPL13	100	94.382	ENSMLUG00000009756	MRPL13	100	94.382	Myotis_lucifugus
ENSG00000172172	MRPL13	100	92.697	ENSNGAG00000024334	Mrpl13	100	92.697	Nannospalax_galili
ENSG00000172172	MRPL13	100	79.592	ENSNBRG00000021965	mrpl13	99	78.090	Neolamprologus_brichardi
ENSG00000172172	MRPL13	100	99.438	ENSNLEG00000028268	MRPL13	100	99.438	Nomascus_leucogenys
ENSG00000172172	MRPL13	95	81.818	ENSMEUG00000004590	-	100	55.556	Notamacropus_eugenii
ENSG00000172172	MRPL13	100	89.796	ENSOPRG00000015721	MRPL13	100	89.773	Ochotona_princeps
ENSG00000172172	MRPL13	100	89.888	ENSODEG00000001950	MRPL13	100	89.888	Octodon_degus
ENSG00000172172	MRPL13	100	85.034	ENSOANG00000000414	MRPL13	99	84.831	Ornithorhynchus_anatinus
ENSG00000172172	MRPL13	100	90.449	ENSOCUG00000016189	MRPL13	100	90.449	Oryctolagus_cuniculus
ENSG00000172172	MRPL13	100	76.871	ENSORLG00000004647	mrpl13	99	75.843	Oryzias_latipes
ENSG00000172172	MRPL13	100	77.551	ENSORLG00020022623	mrpl13	99	76.404	Oryzias_latipes_hni
ENSG00000172172	MRPL13	100	77.551	ENSORLG00015008036	mrpl13	83	76.744	Oryzias_latipes_hsok
ENSG00000172172	MRPL13	100	76.190	ENSOMEG00000011732	mrpl13	99	75.281	Oryzias_melastigma
ENSG00000172172	MRPL13	100	91.837	ENSOGAG00000014284	MRPL13	98	91.477	Otolemur_garnettii
ENSG00000172172	MRPL13	100	89.116	ENSOARG00000017405	-	100	80.303	Ovis_aries
ENSG00000172172	MRPL13	100	89.116	ENSOARG00000019181	-	100	88.202	Ovis_aries
ENSG00000172172	MRPL13	100	99.438	ENSPPAG00000043579	MRPL13	100	99.438	Pan_paniscus
ENSG00000172172	MRPL13	100	90.449	ENSPPRG00000024807	MRPL13	100	90.449	Panthera_pardus
ENSG00000172172	MRPL13	100	90.449	ENSPTIG00000021819	MRPL13	100	90.449	Panthera_tigris_altaica
ENSG00000172172	MRPL13	100	99.438	ENSPTRG00000020541	MRPL13	100	99.438	Pan_troglodytes
ENSG00000172172	MRPL13	100	98.876	ENSPANG00000001115	MRPL13	100	98.876	Papio_anubis
ENSG00000172172	MRPL13	100	80.952	ENSPKIG00000018874	mrpl13	99	79.775	Paramormyrops_kingsleyae
ENSG00000172172	MRPL13	96	91.111	ENSPSIG00000008016	MRPL13	99	86.905	Pelodiscus_sinensis
ENSG00000172172	MRPL13	100	78.231	ENSPMGG00000022710	mrpl13	99	76.966	Periophthalmus_magnuspinnatus
ENSG00000172172	MRPL13	100	91.573	ENSPEMG00000016375	Mrpl13	100	91.573	Peromyscus_maniculatus_bairdii
ENSG00000172172	MRPL13	100	65.986	ENSPMAG00000007735	-	98	65.909	Petromyzon_marinus
ENSG00000172172	MRPL13	100	90.476	ENSPCIG00000019489	MRPL13	100	88.764	Phascolarctos_cinereus
ENSG00000172172	MRPL13	99	79.452	ENSPFOG00000010630	mrpl13	99	77.528	Poecilia_formosa
ENSG00000172172	MRPL13	99	79.452	ENSPLAG00000013671	mrpl13	99	77.528	Poecilia_latipinna
ENSG00000172172	MRPL13	99	79.452	ENSPMEG00000002019	mrpl13	99	77.528	Poecilia_mexicana
ENSG00000172172	MRPL13	99	78.767	ENSPREG00000009510	mrpl13	99	76.966	Poecilia_reticulata
ENSG00000172172	MRPL13	98	100.000	ENSPPYG00000018847	-	88	92.308	Pongo_abelii
ENSG00000172172	MRPL13	100	93.258	ENSPCAG00000001541	MRPL13	100	93.258	Procavia_capensis
ENSG00000172172	MRPL13	95	81.818	ENSPCOG00000016230	MRPL13	92	93.893	Propithecus_coquereli
ENSG00000172172	MRPL13	98	89.130	ENSPVAG00000003719	MRPL13	100	82.022	Pteropus_vampyrus
ENSG00000172172	MRPL13	100	80.272	ENSPNYG00000004669	mrpl13	99	78.652	Pundamilia_nyererei
ENSG00000172172	MRPL13	100	76.966	ENSPNAG00000009319	mrpl13	99	76.966	Pygocentrus_nattereri
ENSG00000172172	MRPL13	100	90.476	ENSRNOG00000004401	Mrpl13	100	89.326	Rattus_norvegicus
ENSG00000172172	MRPL13	95	90.909	ENSRBIG00000035341	MRPL13	98	83.333	Rhinopithecus_bieti
ENSG00000172172	MRPL13	100	98.315	ENSRROG00000044613	MRPL13	100	98.315	Rhinopithecus_roxellana
ENSG00000172172	MRPL13	98	97.826	ENSSBOG00000003037	MRPL13	100	93.820	Saimiri_boliviensis_boliviensis
ENSG00000172172	MRPL13	100	82.313	ENSSFOG00015005149	mrpl13	99	79.775	Scleropages_formosus
ENSG00000172172	MRPL13	100	80.272	ENSSMAG00000002558	mrpl13	99	77.528	Scophthalmus_maximus
ENSG00000172172	MRPL13	100	81.633	ENSSDUG00000016507	mrpl13	99	79.775	Seriola_dumerili
ENSG00000172172	MRPL13	100	82.313	ENSSLDG00000022405	mrpl13	99	80.337	Seriola_lalandi_dorsalis
ENSG00000172172	MRPL13	82	91.667	ENSSARG00000014236	MRPL13	100	91.667	Sorex_araneus
ENSG00000172172	MRPL13	100	83.673	ENSSPUG00000008445	MRPL13	99	81.461	Sphenodon_punctatus
ENSG00000172172	MRPL13	100	80.952	ENSSPAG00000013067	mrpl13	99	78.652	Stegastes_partitus
ENSG00000172172	MRPL13	100	92.135	ENSSSCG00000005996	MRPL13	90	92.135	Sus_scrofa
ENSG00000172172	MRPL13	100	79.592	ENSTRUG00000023240	mrpl13	99	77.528	Takifugu_rubripes
ENSG00000172172	MRPL13	100	63.514	ENSTNIG00000009643	mrpl13	97	64.740	Tetraodon_nigroviridis
ENSG00000172172	MRPL13	98	91.304	ENSTBEG00000004571	MRPL13	100	73.373	Tupaia_belangeri
ENSG00000172172	MRPL13	100	91.573	ENSTTRG00000005939	MRPL13	100	91.573	Tursiops_truncatus
ENSG00000172172	MRPL13	97	87.719	ENSUAMG00000009636	MRPL13	93	87.719	Ursus_americanus
ENSG00000172172	MRPL13	100	91.011	ENSUMAG00000021939	MRPL13	100	91.011	Ursus_maritimus
ENSG00000172172	MRPL13	98	89.130	ENSVPAG00000000774	MRPL13	100	82.022	Vicugna_pacos
ENSG00000172172	MRPL13	100	81.034	ENSVVUG00000016056	MRPL13	98	81.034	Vulpes_vulpes
ENSG00000172172	MRPL13	84	72.222	ENSXETG00000025658	mrpl13	95	76.000	Xenopus_tropicalis
ENSG00000172172	MRPL13	99	79.452	ENSXCOG00000016141	mrpl13	99	77.528	Xiphophorus_couchianus
ENSG00000172172	MRPL13	99	79.452	ENSXMAG00000010846	mrpl13	99	77.528	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279069.	NAS	Function
GO:0005515	protein binding	20601428.	IPI	Function
GO:0005739	mitochondrion	28892042.	IDA	Component
GO:0005743	mitochondrial inner membrane	-	TAS	Component
GO:0005761	mitochondrial ribosome	20601428.	IDA	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	21531335.25278503.28892042.	IDA	Component
GO:0005762	mitochondrial large ribosomal subunit	11279069.	NAS	Component
GO:0005840	ribosome	21873635.	IBA	Component
GO:0006412	translation	11279069.	NAS	Process
GO:0017148	negative regulation of translation	21873635.	IBA	Process
GO:0070125	mitochondrial translational elongation	-	TAS	Process
GO:0070126	mitochondrial translational termination	-	TAS	Process

EuRBPDB

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathway

Phenotype

PPI

Ortholog

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.