EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact
TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1421043183Missense_MutationNAR64L0.25RnaseA
BLCAchr14210435853'UTRnovel0.6
BRCAchr1421043363Missense_MutationNAK124M0.13RnaseA
BRCAchr14210435083'UTRnovel0.21
BRCAchr1421043172SilentNAK60K0.48
BRCAchr1421043265Missense_MutationNAK91N0.11RnaseA
COADchr14210437403'UTRnovel0.28
COADchr14210441193'UTRnovel0.37
COADchr14210441693'UTRnovel0.42
COADchr1421043302Missense_Mutationrs202167148V104M0.13RnaseA
COADchr1421043157Frame_Shift_InsnovelN57Kfs*30.13RnaseA
COADchr1421043405Missense_MutationnovelQ138R0.35RnaseA
COADchr1421043383Missense_Mutationrs371662364V131I0.34RnaseA
ESCAchr14210440233'UTRnovel0.27
GBMchr1421043080Missense_MutationnovelP30S0.6
GBMchr1421043366Missense_Mutationrs148716297R125Q0.23RnaseA
HNSCchr1421043270Missense_MutationnovelG93D0.36RnaseA
KIRCchr1421043231Frame_Shift_InsnovelC83Wfs*160.22RnaseA
LGGchr1421042997Missense_MutationnovelA2V0.48
LIHCchr1421043316Missense_MutationnovelM108I0.45RnaseA
LUADchr14210435003'UTRnovel0.31
LUADchr1421043040SilentnovelL16L0.3
LUADchr14210435633'UTRnovel0.26
LUSCchr1421043089Missense_MutationnovelM33L0.33
OVchr1421043371Missense_MutationNAN127H0.28RnaseA
PRADchr1421043357Missense_MutationNAK122R0.1RnaseA
READchr14210429925'UTRnovel0.37
SARCchr14210441653'UTRnovel0.19
SKCMchr1421043212Missense_Mutationrs182917147E74K0.22RnaseA
SKCMchr1421043406SilentnovelQ138Q0.34
STADchr1421043354Missense_MutationNAY121F0.15RnaseA
STADchr1421043212Missense_Mutationrs182917147E74K0.51RnaseA
UCECchr1421043343Silentrs200202565P117P0.35
UCECchr14210441243'UTRnovel0.06
UCECchr1421043016Missense_MutationNAF8L0.37
UCECchr1421043166SilentnovelI58I0.29
UCECchr1421043166Missense_MutationNAI58M0.27RnaseA
UCECchr1421043381Missense_MutationnovelY130C0.1RnaseA
UCECchr1421043056Missense_MutationNAA22S0.47
UCECchr1421043248Missense_MutationNAP86S0.63RnaseA
UCECchr14210438033'UTRnovel0.44
UCECchr1421043422Nonsense_MutationnovelQ144*0.24RnaseA
UCECchr14210441383'UTRnovel0.19
UCECchr14210437413'UTRnovel0.22
UCECchr1421043329Missense_MutationNAS113P0.47RnaseA
UCECchr14210439433'UTRnovel0.42
UCECchr1421043083Missense_MutationnovelK31E0.26
UCECchr1421043172SilentNAK60K0.56
UCECchr1421043316Missense_MutationnovelM108I0.52RnaseA
UCECchr1421043413Missense_MutationNAD141Y0.43RnaseA
UCECchr14210437413'UTRnovel0.21
UCECchr1421043383Missense_Mutationrs371662364V131I0.61RnaseA
UCECchr14210435563'UTRnovel0.1
UCECchr14210436523'UTRnovel0.28
UCECchr1421043153Missense_MutationnovelA54V0.22RnaseA
UCECchr14210437683'UTRnovel0.2
UCECchr14210441353'UTRrs1927020660.46

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCAMP0.27780.056464
ACCDEL0.13330.19769
CHOLDEL0.36110.00040262
HNSCDEL0.11110.0025503
KIRPDEL0.16670.085174
LUSCDEL0.26350.0082553
OVAMP0.21244.811e-06
PAADDEL0.09240.11332
READDEL0.36970.0043084

Survival Analysis
CancerP-value Q-value
THYM0.035

Kaplan-Meier Survival Analysis

MESO0.026

Kaplan-Meier Survival Analysis

SKCM0.032

Kaplan-Meier Survival Analysis

BRCA0.049

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000165799 (Gene tree)
Gene ID
84659
Gene Symbol
RNASE7
Alias
RAE1
Full Name
ribonuclease A family member 7
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
2,009 bases
Position
chr14:21,042,226-21,044,234
Accession
19278
RBP type
canonical RBP
Summary
The protein encoded by this gene belongs to the pancreatic ribonuclease family, a subset of the ribonuclease A superfamily. The protein has broad-spectrum antimicrobial activity against bacteria and fungi. [provided by RefSeq, Oct 2014]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000298690RnaseAPF00074.201.9e-3911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000481538RNASE7-202922-ENSP00000431382156 (aa)-Q9H1E1
ENST00000298690RNASE7-2011498-ENSP00000298690156 (aa)-Q9H1E1
Gene Model
Click here to download ENSG00000165799's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000165799Platelet Function Tests2.4881671E-006-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000165799's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000165799RNASE710076.282ENSG00000173431RNASE810075.641
ENSG00000165799RNASE78737.143ENSG00000169397RNASE38837.143
ENSG00000165799RNASE78853.285ENSG00000169413RNASE69153.285
ENSG00000165799RNASE77537.903ENSG00000258818RNASE47737.903
ENSG00000165799RNASE77436.066ENSG00000129538RNASE18637.963
ENSG00000165799RNASE77632.283ENSG00000214274ANG7632.283
ENSG00000165799RNASE78739.716ENSG00000169385RNASE28839.716
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000165799RNASE710080.128ENSANAG00000010473RNASE810080.128Aotus_nancymaae
ENSG00000165799RNASE710062.179ENSTSYG00000009702-10062.179Carlito_syrichta
ENSG00000165799RNASE710075.000ENSCSAG00000000341RNASE810074.359Chlorocebus_sabaeus
ENSG00000165799RNASE710053.939ENSFCAG00000038708-9853.333Felis_catus
ENSG00000165799RNASE710098.077ENSGGOG00000042974RNASE710098.077Gorilla_gorilla
ENSG00000165799RNASE710074.359ENSSTOG00000021538-10074.359Ictidomys_tridecemlineatus
ENSG00000165799RNASE710078.481ENSOGAG00000001147-10078.481Otolemur_garnettii
ENSG00000165799RNASE710076.923ENSPPAG00000022422RNASE810076.923Pan_paniscus
ENSG00000165799RNASE710098.077ENSPPAG00000033312RNASE710098.077Pan_paniscus
ENSG00000165799RNASE710075.949ENSPTRG00000030802RNASE810075.949Pan_troglodytes
ENSG00000165799RNASE710098.077ENSPTRG00000048912RNASE710098.077Pan_troglodytes
ENSG00000165799RNASE710075.641ENSPPYG00000005588RNASE810075.641Pongo_abelii
ENSG00000165799RNASE710094.231ENSPPYG00000005587RNASE710094.231Pongo_abelii
ENSG00000165799RNASE710079.487ENSRBIG00000034590RNASE810078.846Rhinopithecus_bieti
ENSG00000165799RNASE710079.487ENSRROG00000025981RNASE810078.846Rhinopithecus_roxellana
ENSG00000165799RNASE710076.433ENSSBOG00000035350RNASE88676.433Saimiri_boliviensis_boliviensis
ENSG00000165799RNASE79775.000ENSTBEG00000005176-10073.548Tupaia_belangeri
ENSG00000165799RNASE76664.078ENSUAMG00000011106-6364.078Ursus_americanus
ENSG00000165799RNASE79957.962ENSVPAG00000005213-9957.962Vicugna_pacos
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001530lipopolysaccharide binding20180804.IDAFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0004519endonuclease activity-IEAFunction
GO:0004540ribonuclease activity21873635.IBAFunction
GO:0004540ribonuclease activity12244054.19641608.IDAFunction
GO:0005576extracellular region19641608.23302724.IDAComponent
GO:0005576extracellular region12244054.NASComponent
GO:0005576extracellular region-TASComponent
GO:0005615extracellular space25075772.IDAComponent
GO:0005737cytoplasm25075772.IDAComponent
GO:0019730antimicrobial humoral response-TASProcess
GO:0019731antibacterial humoral response23302724.25075772.IDAProcess
GO:0042834peptidoglycan binding20180804.IDAFunction
GO:0045087innate immune response16940129.23302724.25075772.IDAProcess
GO:0045087innate immune response12244054.NASProcess
GO:0050829defense response to Gram-negative bacterium12244054.16940129.20180804.23302724.25075772.IDAProcess
GO:0050830defense response to Gram-positive bacterium12244054.16940129.19641608.20180804.23302724.25075772.IDAProcess
GO:0050832defense response to fungus12244054.IDAProcess
GO:0051673membrane disruption in other organism20180804.23302724.IDAProcess
GO:0061844antimicrobial humoral immune response mediated by antimicrobial peptide12244054.25075772.IDAProcess
GO:0090501RNA phosphodiester bond hydrolysis-IEAProcess
To top

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us