EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr11795876975'Flanknovel0.93
ACCchr1179652071SilentnovelY678Y0.91
ACCchr1179650951Missense_MutationNAD629N0.27
BLCAchr11795887075'Flanknovel0.19
BLCAchr1179595676Missense_MutationnovelT230K0.06
BLCAchr11795875555'Flanknovel0.12
BLCAchr1179652189Missense_Mutationrs563073215R718C0.33
BLCAchr1179669299Missense_MutationNAE865Q0.12
BLCAchr1179635864Silentrs147568109L499L0.39
BLCAchr11796910833'UTRnovel0.57
BLCAchr1179690942Silentnovel*982*0.63
BLCAchr1179630904SilentNAK370K0.08
BLCAchr1179663378Missense_Mutationrs577467446W792R0.18
BLCAchr1179640443Missense_MutationNAE600Q0.19
BRCAchr1179618627Missense_Mutationrs775805075A287V0.13
BRCAchr11795883035'Flanknovel0.21
BRCAchr1179592602Splice_Regionnovel0.14
BRCAchr1179663441Missense_MutationNAE813Q0.15
BRCAchr1179592848Splice_SitenovelX78_splice0.21
BRCAchr1179635807SilentNAI480I0.12
BRCAchr1179690755SilentNAL920L0.25
BRCAchr1179651037SilentnovelA657A0.26
BRCAchr1179640379Splice_Regionrs781235530K578K0.48
BRCAchr1179663372Missense_MutationNAD790N0.29
BRCAchr1179618618Missense_MutationNAS284L0.13
BRCAchr1179652177Nonsense_MutationnovelE714*0.05
BRCAchr1179630808Missense_MutationNAF338L0.1
BRCAchr1179690846Missense_MutationNAR950Q0.07
BRCAchr11795883015'Flanknovel0.25
BRCAchr1179634577Missense_MutationNAP416L0.18
CESCchr1179593659Silentrs369571297A144A0.42
CESCchr1179654284Intronnovel0.08
CESCchr1179593777Missense_MutationNAD184N0.23
CESCchr11795882895'Flanknovel0.39
CESCchr1179690812Missense_MutationNAE939Q0.65
CESCchr1179592843Silentrs144528038L76L0.11
CESCchr11795879085'Flanknovel0.52
CESCchr1179690858Missense_MutationnovelT954I0.11
CESCchr1179651019Missense_MutationNAL651F0.46
CESCchr11795890445'Flanknovel0.3
CESCchr1179650902Missense_MutationnovelQ612H0.39
CESCchr1179618652Missense_MutationNAI295M0.43
CESCchr1179654276Intronnovel0.33
COADchr1179662152Missense_MutationNAD737N0.42
COADchr11795884545'Flanknovel0.31
COADchr1179630843Missense_MutationNAD350V0.09
COADchr1179593679Missense_MutationNAS151Y0.19
COADchr1179650880Missense_MutationNAS605L0.35
COADchr1179634560Frame_Shift_DelNAK412Nfs*170.14
COADchr1179639879Missense_MutationnovelM521V0.07
COADchr1179650993Missense_MutationNAE643K0.33
COADchr1179592808Missense_Mutationrs375641517R65C0.39
COADchr1179593770Silentrs755225162A181A0.51
COADchr11795890355'Flanknovel0.21
COADchr11795877025'Flanknovel0.15
COADchr1179639954Missense_MutationnovelI546V0.33
COADchr1179595807Missense_MutationnovelK274Q0.15
COADchr1179630897Missense_Mutationrs113046765A368V0.09
COADchr1179662125Missense_MutationNAP728T0.15
COADchr1179592767Missense_MutationnovelR51Q0.19
COADchr1179592752Missense_Mutationrs775933425R46Q0.08TUDOR
COADchr1179595734Silentrs761083988P249P0.12
COADchr1179639839Splice_RegionnovelR507R0.46
DLBCchr11795884455'Flanknovel0.42
DLBCchr1179639991Missense_MutationnovelV558G0.15
ESCAchr1179669392Missense_MutationnovelP896S0.39
ESCAchr1179662153Missense_MutationnovelD737A0.14
ESCAchr1179690771Missense_Mutationrs570123255R925H0.21
ESCAchr1179621092Splice_Siters746232955X324_splice0.15
ESCAchr1179650967Frame_Shift_DelNAL636Cfs*160.29
ESCAchr1179690799Silentrs371987660L934L0.2
ESCAchr1179662263Missense_MutationnovelS774A0.57
GBMchr11796909483'UTRnovel0.35
GBMchr1179650964Missense_MutationnovelN633S0.47
GBMchr1179652090Missense_MutationnovelP685S0.4
GBMchr1179663405Missense_MutationnovelL801I0.04
GBMchr1179669222Missense_MutationnovelS839Y0.45
GBMchr1179652161Missense_MutationnovelI708M0.25
GBMchr1179593582Missense_Mutationrs748631957R119W0.51
GBMchr1179595790Missense_MutationnovelR268I0.05
GBMchr1179635679Missense_MutationnovelN438Y0.13
HNSCchr1179650981Missense_MutationnovelT639A0.24
HNSCchr1179640407Missense_MutationnovelA588S0.05
HNSCchr1179650967Frame_Shift_DelNAL636Cfs*160.46
HNSCchr1179640433SilentnovelV596V0.1
HNSCchr1179618667SilentnovelK300K0.24
HNSCchr1179593512SilentnovelR95R0.23
HNSCchr1179650978Missense_MutationnovelD638H0.18
HNSCchr11795876655'Flanknovel0.12
HNSCchr11795886865'Flanknovel0.38
HNSCchr1179690780Missense_MutationnovelS928C0.22
HNSCchr1179592711Missense_MutationnovelE32D0.17TUDOR
HNSCchr1179663405Missense_MutationNAL801F0.24
HNSCchr1179592750SilentnovelL45L0.21
HNSCchr1179634477Nonsense_MutationnovelE383*0.24
HNSCchr1179634620Frame_Shift_InsnovelL431Ifs*200.06
HNSCchr1179634621In_Frame_InsnovelL431delinsCIFVKI0.06
KIRCchr1179639895Frame_Shift_DelnovelQ527Sfs*80.09
KIRPchr1179639907Missense_MutationNAH530P0.17
LAMLchr1179618667SilentnovelK300K0.08
LGGchr1179593706Missense_MutationnovelR160I0.06
LGGchr1179663425Frame_Shift_InsnovelE808Hfs*90.1
LIHCchr1179669264Missense_MutationnovelT853I0.26
LIHCchr1179635834SilentNAR489R0.4
LIHCchr1179690748SilentNAA917A0.08
LIHCchr1179592796Missense_MutationnovelP61S0.1
LIHCchr1179662276Missense_MutationnovelM778T0.3
LIHCchr1179663440Silentrs147178825P812P0.31
LIHCchr1179662181SilentNAP746P0.58
LIHCchr1179640436SilentnovelR597R0.29
LIHCchr1179630886SilentNAL364L0.36
LIHCchr1179592624SilentnovelE3E0.39
LIHCchr1179634460Missense_MutationNAQ377L0.04
LIHCchr1179595765Nonsense_MutationnovelK260*0.31
LIHCchr1179593652Missense_MutationnovelL142Q0.24
LIHCchr1179634460Missense_MutationNAQ377L0.4
LIHCchr1179595787Nonsense_MutationNAS267*0.17
LIHCchr1179654259IntronNA0.09
LIHCchr1179630792Frame_Shift_InsnovelL336Ifs*140.11
LIHCchr1179592785Missense_MutationnovelV57A0.12
LIHCchr1179662195Missense_MutationnovelM751T0.31
LIHCchr1179640445Missense_MutationnovelE600D0.12
LIHCchr1179593575SilentnovelR116R0.12
LIHCchr1179662104Missense_MutationnovelD721N0.15
LIHCchr1179593584SilentNAR119R0.34
LUADchr1179669396Missense_Mutationrs779603364S897F0.14
LUADchr1179634497SilentnovelS389S0.08
LUADchr1179662133SilentNAL730L0.08
LUADchr1179592648SilentNAL11L0.35
LUADchr1179650973Nonsense_MutationnovelL636*0.04
LUADchr1179639842SilentnovelR508R0.08
LUADchr1179621036Missense_MutationnovelV306A0.36
LUADchr1179635854Nonsense_MutationnovelS496*0.39
LUADchr1179663480Missense_MutationnovelR826G0.48
LUADchr11795882855'Flanknovel0.15
LUADchr11795882715'Flanknovel0.63
LUADchr1179592638Missense_MutationnovelQ8P0.32TUDOR
LUADchr11795884045'Flanknovel0.24
LUADchr1179634501Missense_MutationnovelP391T0.2
LUADchr1179634502Missense_MutationnovelP391Q0.2
LUADchr1179593550Missense_MutationnovelR108I0.55
LUADchr1179662238Silentrs763691989S765S0.2
LUADchr1179634477Nonsense_MutationnovelE383*0.21
LUADchr1179618654Missense_MutationNAS296I0.49
LUADchr1179595804Missense_MutationnovelE273K0.23
LUADchr1179592760Missense_MutationnovelG49W0.22TUDOR
LUADchr1179690861Missense_MutationNAA955V0.1
LUADchr1179690829Missense_MutationnovelQ944H0.27
LUADchr1179650992Missense_MutationNAN642K0.18
LUADchr1179593545Missense_MutationNAK106N0.21
LUADchr11796909713'UTRnovel0.27
LUADchr11796909463'UTRnovel0.2
LUADchr1179593539Missense_MutationnovelM104I0.16
LUADchr11795876745'Flanknovel0.16
LUADchr1179652171Missense_MutationNAS712P0.15
LUADchr1179690784SilentNAV929V0.35
LUADchr1179618638Missense_MutationNAP291T0.31
LUADchr1179635677Missense_MutationNAT437K0.24
LUADchr1179662215Missense_MutationnovelA758S0.22
LUADchr11795876655'Flanknovel0.12
LUADchr1179593800SilentNAT191T0.33
LUADchr11795883665'Flanknovel0.13
LUADchr1179652111Missense_MutationNAE692K0.17
LUSCchr1179650954Missense_MutationnovelG630R0.21
LUSCchr1179639922Missense_MutationNAR535K0.34
LUSCchr1179639923SilentnovelR535R0.34
LUSCchr1179595751Missense_MutationnovelM255K0.19
LUSCchr1179630815Missense_MutationNAV341L0.35
LUSCchr1179651047Nonsense_Mutationrs768183823R661*0.07
LUSCchr1179639922Missense_MutationNAR535K0.21
LUSCchr1179639923Missense_MutationNAR535S0.21
LUSCchr1179662219Frame_Shift_DelnovelH760Ifs*430.48
LUSCchr1179663486Nonsense_MutationNAQ828*0.4
LUSCchr1179592808Missense_MutationNAR65S0.29
LUSCchr11795886825'Flanknovel0.4
LUSCchr1179663403Missense_MutationnovelG800V0.16
LUSCchr11795886865'Flanknovel0.5
LUSCchr1179593568Missense_MutationnovelG114A0.28
LUSCchr1179635834SilentNAR489R0.1
LUSCchr1179662215Missense_Mutationrs145054790A758T0.25
LUSCchr1179630908Missense_MutationnovelP372T0.43
LUSCchr1179669388SilentnovelE894E0.17
LUSCchr1179593864Missense_MutationNAA213P0.43
LUSCchr1179690785Missense_MutationNAD930Y0.15
LUSCchr1179593681Missense_MutationnovelD152H0.32
LUSCchr1179595684Missense_MutationnovelP233T0.16
LUSCchr1179690804Nonsense_MutationNAL936*0.23
LUSCchr1179592635Missense_Mutationrs764470335I7T0.25TUDOR
LUSCchr11795887015'Flanknovel0.4
LUSCchr1179663352Missense_MutationnovelW783L0.27
LUSCchr1179595634Missense_MutationnovelI216T0.45
LUSCchr1179650930Missense_MutationnovelG622W0.1
LUSCchr1179592805Missense_MutationNAV64F0.35
LUSCchr1179690918Missense_MutationNAP974H0.38
LUSCchr1179635693SilentnovelL442L0.07
LUSCchr1179663479Missense_MutationnovelN825K0.25
LUSCchr1179662171Missense_MutationnovelN743S0.23
LUSCchr1179639972Missense_MutationNAE552Q0.45
LUSCchr1179639983Missense_MutationNAE555D0.23
LUSCchr11795885675'Flanknovel0.1
LUSCchr1179593672Missense_MutationnovelL149V0.12
LUSCchr1179652177Missense_MutationnovelE714Q0.3
OVchr1179690771Missense_Mutationrs570123255R925H0.18
OVchr11796909553'UTRnovel0.15
OVchr1179592727Missense_MutationnovelM38L0.07TUDOR
OVchr1179640046SilentNAF576F0.49
OVchr1179650951Missense_MutationNAD629N0.16
PAADchr1179635787Missense_MutationnovelG474W0.13
PAADchr1179595644SilentnovelQ219Q0.27
PAADchr1179669402Missense_MutationnovelS899Y0.16
PRADchr1179669208SilentNAN834N0.32
PRADchr11795883695'Flanknovel0.5
READchr1179592751Nonsense_MutationNAR46*0.3TUDOR
READchr1179634559Frame_Shift_InsNAQ413Tfs*130.3
READchr1179592620Missense_MutationnovelS2Y0.09
READchr1179652064Missense_MutationnovelA676V0.42
READchr1179635880Nonsense_MutationnovelE505*0.22
READchr1179669248Missense_Mutationrs756995942F848V0.12
SARCchr1179669337Missense_MutationnovelQ877H0.09
SKCMchr1179635807SilentnovelI480I0.16
SKCMchr1179662133SilentNAL730L0.29
SKCMchr1179593529Missense_MutationNAR101Q0.13
SKCMchr1179635780SilentnovelS471S0.42
SKCMchr11795886865'Flanknovel0.36
SKCMchr1179635779Missense_MutationNAS471F0.37
SKCMchr1179634614SilentNAV428V0.56
SKCMchr1179593855Missense_Mutationrs201086446G210R0.22
SKCMchr1179640036Missense_MutationnovelS573F0.44
SKCMchr1179640037SilentnovelS573S0.45
SKCMchr1179595685Missense_Mutationrs756660429P233L0.38
SKCMchr1179663405Missense_MutationNAL801F0.31
SKCMchr1179662164Missense_MutationnovelD741N0.21
SKCMchr1179662250SilentNAK769K0.25
SKCMchr1179690894Missense_MutationNAS966F0.21
SKCMchr1179634587Missense_MutationNAK419N0.27
SKCMchr1179650910Missense_MutationNAC615Y0.16
SKCMchr1179635846SilentnovelR493R0.15
SKCMchr1179651007SilentNAF647F0.1
SKCMchr1179669381Missense_MutationNAS892F0.24
SKCMchr11795886955'Flanknovel0.51
SKCMchr1179662198Missense_MutationnovelG752E0.49
SKCMchr1179593471Missense_MutationNAE82K0.18
SKCMchr1179618645Missense_MutationNAG293E0.29
SKCMchr1179634514Missense_MutationNAS395L0.3
SKCMchr1179651007SilentNAF647F0.28
SKCMchr1179652057Missense_MutationNAP674S0.08
SKCMchr11796909453'UTRnovel0.73
SKCMchr1179640413Missense_MutationnovelP590S0.42
SKCMchr11795876025'Flanknovel0.44
SKCMchr1179593715Missense_Mutationrs777146655R163Q0.35
SKCMchr1179618635Missense_MutationnovelG290R0.28
SKCMchr1179652074Silentrs779171277T679T0.24
SKCMchr11795883785'Flanknovel0.19
SKCMchr1179662203Missense_MutationNAG754R0.47
SKCMchr1179662152Missense_MutationNAD737N0.46
SKCMchr1179662232SilentnovelT763T0.16
SKCMchr11796910193'UTRnovel0.26
SKCMchr1179635759SilentNAL464L0.52
SKCMchr1179595734Silentrs761083988P249P0.32
SKCMchr1179592715Missense_MutationNAE34K0.56TUDOR
SKCMchr1179662133Silentrs779027975L730L0.43
SKCMchr1179690715SilentNAI906I0.52
SKCMchr1179651026Missense_MutationnovelE654K0.21
SKCMchr1179618645Missense_MutationNAG293E0.1
SKCMchr1179618645Missense_MutationNAG293E0.19
SKCMchr11795890515'Flanknovel0.14
SKCMchr1179650896SilentnovelQ610Q0.11
SKCMchr1179663384Missense_MutationNAD794N0.29
SKCMchr1179651007SilentNAF647F0.1
SKCMchr1179669250SilentnovelF848F0.06
SKCMchr1179640018Missense_MutationnovelG567E0.38
SKCMchr1179634555Missense_MutationNAP409S0.26
SKCMchr1179635851Missense_Mutationrs762569393S495L0.37
SKCMchr1179662142SilentnovelV733V0.15
SKCMchr1179593802Missense_MutationNAR192K0.08
SKCMchr1179662198Missense_MutationnovelG752E0.84
SKCMchr11795873815'Flanknovel0.43
SKCMchr1179639870Nonsense_MutationNAR518*0.36
SKCMchr1179690898SilentNAR967R0.21
SKCMchr1179690697Splice_Regionrs760102745V900V0.23
SKCMchr1179630921Splice_SiteNAX376_splice0.37
SKCMchr1179651058SilentNAI664I0.08
SKCMchr1179618647Missense_MutationNAT294A0.23
SKCMchr1179618645Missense_MutationNAG293E0.18
SKCMchr1179650942Missense_MutationNAE626K0.27
SKCMchr1179669355SilentNAP883P0.08
SKCMchr11795875975'Flanknovel0.44
SKCMchr11795875985'Flanknovel0.44
SKCMchr1179663348Missense_MutationNAD782N0.21
SKCMchr1179634600Missense_MutationnovelP424T0.14
SKCMchr1179634601Missense_MutationnovelP424L0.14
SKCMchr1179662163Nonsense_MutationNAW740*0.35
SKCMchr1179595755Missense_MutationNAE256D0.26
SKCMchr1179592757Missense_MutationNAL48F0.4TUDOR
SKCMchr1179662237Missense_MutationNAS765N0.2
SKCMchr11795885915'Flanknovel0.13
SKCMchr1179662130SilentNAC729C0.18
SKCMchr11796909643'UTRnovel0.12
SKCMchr1179634459Nonsense_MutationNAQ377*0.12
SKCMchr1179639870Nonsense_MutationNAR518*0.11
SKCMchr11795884645'Flanknovel0.15
SKCMchr1179592778Missense_MutationnovelE55K0.42
SKCMchr1179595652Missense_MutationnovelR222K0.45
SKCMchr1179630865SilentnovelR357R0.22
SKCMchr1179595734Silentrs761083988P249P0.41
SKCMchr1179662155Missense_MutationNAD738N0.17
SKCMchr1179618613SilentNAF282F0.18
SKCMchr1179690935Missense_MutationnovelE980K0.35
SKCMchr11795876965'Flanknovel0.16
SKCMchr1179635876Missense_MutationNAM503I0.08
SKCMchr11795876965'Flanknovel0.35
SKCMchr1179592662Missense_MutationNAR16K0.26TUDOR
SKCMchr1179650993Missense_MutationNAE643K0.45
SKCMchr1179639933Missense_MutationnovelD539N0.47
SKCMchr1179592730Missense_MutationNAV39I0.1TUDOR
SKCMchr1179650942Missense_MutationNAE626K0.1
SKCMchr1179593529Missense_MutationNAR101Q0.26
SKCMchr11796910453'UTRnovel0.57
SKCMchr1179595780Missense_MutationnovelE265K0.25
SKCMchr1179650993Missense_MutationNAE643K0.31
SKCMchr1179593843Missense_MutationNAE206K0.25
SKCMchr1179663414Missense_MutationNAG804R0.53
SKCMchr1179593586Missense_MutationnovelR120Q0.35
SKCMchr1179650881Silentrs150044249S605S0.43
SKCMchr1179650959SilentNAI631I0.61
SKCMchr1179593484Missense_MutationnovelG86E0.14
SKCMchr1179593843Missense_MutationNAE206K0.17
SKCMchr1179662112SilentNAI723I0.35
SKCMchr1179690833Missense_MutationNAL946F0.42
SKCMchr1179662155Missense_MutationNAD738N0.42
SKCMchr1179662272Missense_MutationnovelE777K0.43
SKCMchr1179634575SilentnovelE415E0.39
SKCMchr1179669382Silentrs780844485S892S0.45
STADchr1179663419Silentrs149892600T805T0.31
STADchr1179595782SilentNAE265E0.5
STADchr11795879775'Flanknovel0.54
STADchr1179630793Frame_Shift_Delrs772423686K335Nfs*20.38
STADchr1179690743Missense_Mutationrs530480530R916C0.35
STADchr1179630871SilentNAG359G0.29
STADchr1179650912Missense_Mutationrs199784694G616S0.36
STADchr1179630881Missense_MutationnovelL363I0.22
STADchr1179650967Frame_Shift_DelNAL636Cfs*160.14
STADchr1179635787Missense_MutationnovelG474R0.05
STADchr1179630792Frame_Shift_InsnovelL336Ifs*140.26
STADchr1179592696SilentnovelS27S0.05
STADchr11795890545'Flanknovel0.21
STADchr1179662287Splice_SiteNAX781_splice0.14
STADchr11795883055'Flanknovel0.17
STADchr1179650911Silentrs762786138C615C0.19
THCAchr1179639918Missense_MutationNAV534I0.44
THCAchr11795882825'Flanknovel0.19
THYMchr11796912493'UTRnovel0.12
UCECchr1179630792Frame_Shift_InsnovelL336Ifs*140.5
UCECchr1179634614SilentnovelV428V0.07
UCECchr1179635825Missense_MutationNAF486L0.35
UCECchr1179639911SilentNAL531L0.32
UCECchr11796912113'UTRnovel0.12
UCECchr1179593473Silentrs576077105E82E0.3
UCECchr1179690881Missense_MutationNAR962W0.38
UCECchr1179592808Missense_Mutationrs375641517R65C0.35
UCECchr1179690932Missense_MutationnovelM979V0.52
UCECchr11796911123'UTRnovel0.09
UCECchr1179592627Missense_MutationNAQ4H0.31
UCECchr1179639871Missense_Mutationrs367703698R518Q0.07
UCECchr1179630772Missense_MutationnovelI326M0.37
UCECchr1179650994Missense_MutationnovelE643G0.36
UCECchr11795873985'Flanknovel0.5
UCECchr11795873575'Flanknovel0.45
UCECchr1179634559Frame_Shift_InsNAQ413Tfs*130.39
UCECchr1179634488SilentnovelA386A0.25
UCECchr1179618681Missense_MutationnovelF305C0.46
UCECchr1179669383Missense_Mutationrs201146333A893T0.44
UCECchr1179690742Silentrs754514262S915S0.58
UCECchr1179593529Missense_MutationNAR101Q0.28
UCECchr1179593731Missense_MutationnovelM168I0.17
UCECchr1179663481Missense_MutationNAR826M0.24
UCECchr1179592601Splice_Sitenovel0.04
UCECchr11796909643'UTRnovel0.17
UCECchr11796912263'UTRnovel0.29
UCECchr1179690875Missense_MutationnovelA960T0.43
UCECchr11795884585'Flanknovel0.46
UCECchr1179639912Missense_MutationnovelC532S0.4
UCECchr1179663375Missense_Mutationrs751674376T791A0.43
UCECchr11795883665'Flanknovel0.06
UCECchr1179650966Frame_Shift_InsnovelL636Ffs*30.22
UCECchr1179662187Missense_MutationnovelQ748H0.25
UCECchr1179630877SilentnovelQ361Q0.17
UCECchr1179650955Missense_MutationnovelG630E0.3
UCECchr1179690743Missense_Mutationrs530480530R916C0.3
UCECchr1179593585Nonsense_MutationnovelR120*0.37
UCECchr1179635865Missense_MutationNAE500K0.46
UCECchr1179654290Intronnovel0.1
UCECchr1179593706Missense_MutationnovelR160I0.46
UCECchr1179621036Missense_MutationnovelV306D0.53
UCECchr11796910843'UTRnovel0.47
UCECchr1179592778Missense_MutationnovelE55K0.5
UCECchr1179593658Missense_Mutationrs755169262A144V0.38
UCECchr1179595634Missense_MutationnovelI216N0.25
UCECchr1179690878Missense_Mutationrs757136807A961T0.52
UCECchr1179593529Missense_MutationNAR101Q0.46
UCECchr1179663372Missense_MutationnovelD790Y0.41
UCECchr1179654234Intronnovel0.3
UCECchr1179662143Missense_MutationnovelT734A0.24
UCECchr1179650928Frame_Shift_InsnovelV623Gfs*40.33
UCECchr1179650967Frame_Shift_DelNAL636Cfs*160.18
UCECchr1179592649Missense_Mutationrs201484897R12W0.11TUDOR
UCECchr11795883035'Flanknovel0.26
UCECchr1179618677Missense_MutationnovelK304Q0.29
UCECchr1179663378Missense_Mutationrs577467446W792R0.39
UCECchr1179650911Silentrs762786138C615C0.33
UCECchr1179663491Missense_MutationnovelK829N0.36
UCECchr1179593502Frame_Shift_InsnovelQ94Tfs*60.2
UCECchr1179690770Missense_Mutationrs771332017R925C0.43
UCECchr11796910603'UTRnovel0.46
UCECchr1179650966Frame_Shift_InsnovelL636Ffs*30.29
UCECchr11795876965'Flanknovel0.21
UCECchr1179592711Missense_MutationNAE32D0.25TUDOR
UCECchr1179621069Missense_MutationNAS317Y0.24
UCECchr1179651060Missense_MutationNAS665Y0.17
UCECchr1179663484Missense_Mutationrs750889576T827I0.06
UCECchr1179690742Silentrs754514262S915S0.26
UCECchr1179650890Missense_MutationnovelI608M0.13
UCECchr1179650967Frame_Shift_DelNAL636Cfs*160.41
UCECchr1179690865Frame_Shift_InsnovelL957Ffs*430.29
UCECchr1179662220SilentnovelS759S0.31
UCECchr1179652167SilentNAP710P0.25
UCECchr11796912113'UTRnovel0.26
UCECchr1179592673Missense_Mutationrs543279481I20V0.16TUDOR
UCECchr1179663459Frame_Shift_InsnovelN821Kfs*450.28
UCECchr1179654341Intronrs7609911600.08
UCECchr1179663456Nonsense_MutationNAQ818*0.49
UCECchr1179593618Missense_MutationnovelL131I0.06
UCECchr1179593582Missense_Mutationrs748631957R119W0.35
UCECchr1179593706Missense_MutationnovelR160I0.38
UCECchr1179593529Missense_MutationNAR101Q0.23
UCECchr1179593744Missense_MutationnovelL173F0.49
UCECchr1179635737Missense_Mutationrs750726121P457L0.34
UCECchr1179635833Missense_Mutationrs772079229R489Q0.16
UCECchr1179639842SilentnovelR508R0.42
UCECchr1179652153Nonsense_MutationnovelR706*0.16
UCECchr1179690846Missense_MutationNAR950Q0.54
UCECchr11796912103'UTRnovel0.29
UCECchr11795886015'Flanknovel0.14
UCECchr1179595700Missense_MutationnovelC238F0.08
UCECchr1179650880Missense_MutationNAS605L0.16
UCECchr1179662151SilentNAG736G0.14
UCECchr1179593766Missense_MutationNAN180S0.11
UCECchr11795886815'Flanknovel0.09
UCECchr1179593675Missense_MutationnovelL150I0.39
UCECchr1179635831SilentNAI488I0.57
UCECchr1179654280Intronnovel0.29
UCECchr11796910533'UTRnovel0.36
UCECchr1179593550Missense_MutationnovelR108I0.39
UCSchr1179595634Missense_MutationnovelI216N0.21
UCSchr1179630795Missense_MutationnovelK334T0.32
UVMchr11795873885'Flanknovel0.57

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.02080.0017831
KIRCAMP0.09090.059566
PAADAMP0.22830.085665
TGCTAMP0.34670.088103
THCAAMP0.05010.075436

Survival Analysis
CancerP-value Q-value
THYM0.037

Kaplan-Meier Survival Analysis

KIRC0.016

Kaplan-Meier Survival Analysis

MESO0.043

Kaplan-Meier Survival Analysis

HNSC0.014

Kaplan-Meier Survival Analysis

KICH0.022

Kaplan-Meier Survival Analysis

UCEC0.0002

Kaplan-Meier Survival Analysis

LIHC0.00055

Kaplan-Meier Survival Analysis

LGG0.0074

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000162782 (Gene tree)
Gene ID
163589
Gene Symbol
TDRD5
Alias
FLJ34823|TUDOR3
Full Name
tudor domain containing 5
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
99,660 bases
Position
chr1:179,591,613-179,691,272
Accession
20614
RBP type
canonical RBP
Summary
(Tudor Domain Containing 5) is a Protein Coding gene. An important paralog of this gene is TDRD6.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000294848TUDORPF00567.247.2e-2111
ENSP00000356586TUDORPF00567.247.2e-2111
ENSP00000406052TUDORPF00567.247.6e-2111
ENSP00000410744TUDORPF00567.242.3e-0511

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
29317670TDRD5 binds piRNA precursors and selectively enhances pachytene piRNA processing in mice.Nat Commun2018 Jan 9Ding Ddoi: 10.1038/s41467-017-02622-w.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000444136TDRD5-2043946XM_005244934ENSP000004060521035 (aa)XP_005244991Q8NAT2
ENST00000417329TDRD5-2031805-ENSP00000410744491 (aa)-A0A0C4DG74
ENST00000367614TDRD5-2023632-ENSP00000356586981 (aa)-Q8NAT2
ENST00000294848TDRD5-2013525-ENSP00000294848981 (aa)-Q8NAT2
Gene Model
Click here to download ENSG00000162782's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000162782Body Weight8.3543782868123E-517903300
ENSG00000162782Body Weight3.33930811104999E-517903300
ENSG00000162782Body Weight6.46942529538563E-517903300
ENSG00000162782Platelet Function Tests2.2204460E-016-
ENSG00000162782Platelet Function Tests2.2204460E-016-
ENSG00000162782Platelet Function Tests2.2204460E-016-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000162782rs120705891179593572?Adolescent idiopathic scoliosis30019117EFO_0005423
ENSG00000162782rs1508161671179602727TDiastolic blood pressure30224653[0.2-0.37] mmHg decrease0.2873EFO_0006336
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000162782's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000162782TDRD56740.654ENSAPOG00000021687-9134.963Acanthochromis_polyacanthus
ENSG00000162782TDRD59984.306ENSAMEG00000014736TDRD510084.306Ailuropoda_melanoleuca
ENSG00000162782TDRD55741.509ENSACIG00000009310-7041.509Amphilophus_citrinellus
ENSG00000162782TDRD57132.704ENSAOCG00000002427-8432.746Amphiprion_ocellaris
ENSG00000162782TDRD56934.444ENSAPEG00000006682-8434.492Amphiprion_percula
ENSG00000162782TDRD56933.287ENSATEG00000017002-8433.287Anabas_testudineus
ENSG00000162782TDRD57051.471ENSACAG00000001245TDRD59951.471Anolis_carolinensis
ENSG00000162782TDRD510092.181ENSANAG00000034635TDRD510092.181Aotus_nancymaae
ENSG00000162782TDRD57632.080ENSACLG00000013433-8831.242Astatotilapia_calliptera
ENSG00000162782TDRD56935.949ENSAMXG00000017846-7235.949Astyanax_mexicanus
ENSG00000162782TDRD510084.420ENSBTAG00000002407TDRD510084.420Bos_taurus
ENSG00000162782TDRD510091.884ENSCJAG00000008098TDRD510091.884Callithrix_jacchus
ENSG00000162782TDRD510083.222ENSCAFG00000013822TDRD510083.222Canis_familiaris
ENSG00000162782TDRD510085.234ENSCAFG00020016570TDRD510085.234Canis_lupus_dingo
ENSG00000162782TDRD510084.318ENSCHIG00000026884TDRD510084.318Capra_hircus
ENSG00000162782TDRD510084.114ENSTSYG00000010362TDRD510084.114Carlito_syrichta
ENSG00000162782TDRD510092.947ENSCCAG00000029807TDRD510092.947Cebus_capucinus
ENSG00000162782TDRD510095.849ENSCATG00000042714TDRD510095.849Cercocebus_atys
ENSG00000162782TDRD510077.992ENSCLAG00000012916TDRD510077.992Chinchilla_lanigera
ENSG00000162782TDRD510096.024ENSCSAG00000012216TDRD510096.024Chlorocebus_sabaeus
ENSG00000162782TDRD59950.234ENSCPBG00000025813TDRD59950.327Chrysemys_picta_bellii
ENSG00000162782TDRD510095.169ENSCANG00000037620TDRD510095.169Colobus_angolensis_palliatus
ENSG00000162782TDRD59978.435ENSCGRG00001012501Tdrd59978.435Cricetulus_griseus_chok1gshd
ENSG00000162782TDRD59978.435ENSCGRG00000007804Tdrd59978.435Cricetulus_griseus_crigri
ENSG00000162782TDRD56934.642ENSCSEG00000016358-8534.642Cynoglossus_semilaevis
ENSG00000162782TDRD56733.185ENSCVAG00000015014-9833.433Cyprinodon_variegatus
ENSG00000162782TDRD510078.049ENSDNOG00000014678TDRD510077.085Dasypus_novemcinctus
ENSG00000162782TDRD59377.500ENSETEG00000016819TDRD59377.500Echinops_telfairi
ENSG00000162782TDRD510084.012ENSEASG00005016637TDRD510084.012Equus_asinus_asinus
ENSG00000162782TDRD510082.696ENSECAG00000017037TDRD510082.156Equus_caballus
ENSG00000162782TDRD510076.656ENSEEUG00000003054TDRD59486.057Erinaceus_europaeus
ENSG00000162782TDRD56935.765ENSELUG00000003097-8136.041Esox_lucius
ENSG00000162782TDRD59984.008ENSFCAG00000001806TDRD59984.008Felis_catus
ENSG00000162782TDRD59876.908ENSFDAG00000005189TDRD59976.650Fukomys_damarensis
ENSG00000162782TDRD56640.196ENSFHEG00000003128-9440.196Fundulus_heteroclitus
ENSG00000162782TDRD56551.456ENSGALG00000033634TDRD58351.456Gallus_gallus
ENSG00000162782TDRD56933.288ENSGAFG00000006838-9133.288Gambusia_affinis
ENSG00000162782TDRD59156.657ENSGAGG00000017788TDRD59655.334Gopherus_agassizii
ENSG00000162782TDRD510098.982ENSGGOG00000011310TDRD510098.777Gorilla_gorilla
ENSG00000162782TDRD57632.282ENSHBUG00000018309-8831.566Haplochromis_burtoni
ENSG00000162782TDRD510076.171ENSHGLG00100002899-10076.045Heterocephalus_glaber_male
ENSG00000162782TDRD56832.941ENSHCOG00000018949-8632.941Hippocampus_comes
ENSG00000162782TDRD56936.888ENSIPUG00000025087tdrd57537.213Ictalurus_punctatus
ENSG00000162782TDRD510082.347ENSSTOG00000026328TDRD510082.347Ictidomys_tridecemlineatus
ENSG00000162782TDRD59978.065ENSJJAG00000024411Tdrd59978.065Jaculus_jaculus
ENSG00000162782TDRD55833.162ENSKMAG00000004523-9933.333Kryptolebias_marmoratus
ENSG00000162782TDRD57133.469ENSLBEG00000027480-9733.469Labrus_bergylta
ENSG00000162782TDRD56746.617ENSLACG00000005749TDRD510046.617Latimeria_chalumnae
ENSG00000162782TDRD56635.337ENSLOCG00000009071-9935.337Lepisosteus_oculatus
ENSG00000162782TDRD59981.053ENSLAFG00000015295TDRD510081.053Loxodonta_africana
ENSG00000162782TDRD510095.753ENSMFAG00000045587TDRD510095.753Macaca_fascicularis
ENSG00000162782TDRD510095.753ENSMMUG00000016033TDRD510095.753Macaca_mulatta
ENSG00000162782TDRD510095.753ENSMNEG00000030554TDRD510095.753Macaca_nemestrina
ENSG00000162782TDRD510095.656ENSMLEG00000043004TDRD510095.656Mandrillus_leucophaeus
ENSG00000162782TDRD56934.813ENSMAMG00000006700-8034.813Mastacembelus_armatus
ENSG00000162782TDRD55937.662ENSMZEG00005009928-8037.662Maylandia_zebra
ENSG00000162782TDRD57431.250ENSMZEG00005018676-8830.378Maylandia_zebra
ENSG00000162782TDRD59977.481ENSMAUG00000022134Tdrd59977.481Mesocricetus_auratus
ENSG00000162782TDRD510086.544ENSMICG00000017589TDRD510086.544Microcebus_murinus
ENSG00000162782TDRD59973.589ENSMOCG00000005624Tdrd59873.589Microtus_ochrogaster
ENSG00000162782TDRD56835.294ENSMMOG00000007174-8535.235Mola_mola
ENSG00000162782TDRD510063.828ENSMODG00000006180TDRD510063.919Monodelphis_domestica
ENSG00000162782TDRD56932.917ENSMALG00000017614-9333.333Monopterus_albus
ENSG00000162782TDRD510076.667MGP_CAROLIEiJ_G0014733Tdrd59976.667Mus_caroli
ENSG00000162782TDRD510077.333ENSMUSG00000060985Tdrd59977.333Mus_musculus
ENSG00000162782TDRD59975.383MGP_PahariEiJ_G0027969Tdrd59975.383Mus_pahari
ENSG00000162782TDRD510076.667MGP_SPRETEiJ_G0015540Tdrd59976.667Mus_spretus
ENSG00000162782TDRD510083.603ENSMPUG00000005232TDRD510083.603Mustela_putorius_furo
ENSG00000162782TDRD59981.089ENSMLUG00000010369TDRD510081.089Myotis_lucifugus
ENSG00000162782TDRD59979.119ENSNGAG00000016603Tdrd59979.119Nannospalax_galili
ENSG00000162782TDRD56932.821ENSNBRG00000022619-8732.821Neolamprologus_brichardi
ENSG00000162782TDRD510097.149ENSNLEG00000015751TDRD510097.146Nomascus_leucogenys
ENSG00000162782TDRD57087.037ENSMEUG00000012055-7087.037Notamacropus_eugenii
ENSG00000162782TDRD57786.364ENSOPRG00000014271-9367.134Ochotona_princeps
ENSG00000162782TDRD57231.345ENSONIG00000014143-8835.233Oreochromis_niloticus
ENSG00000162782TDRD510061.862ENSOANG00000000964TDRD510061.862Ornithorhynchus_anatinus
ENSG00000162782TDRD510078.032ENSOCUG00000000491TDRD59978.107Oryctolagus_cuniculus
ENSG00000162782TDRD56835.193ENSORLG00000025711-7635.193Oryzias_latipes
ENSG00000162782TDRD56835.479ENSORLG00020014234-8834.488Oryzias_latipes_hni
ENSG00000162782TDRD56835.562ENSORLG00015009546-7635.562Oryzias_latipes_hsok
ENSG00000162782TDRD56933.567ENSOMEG00000004366-8033.567Oryzias_melastigma
ENSG00000162782TDRD510084.971ENSOGAG00000008026TDRD510084.971Otolemur_garnettii
ENSG00000162782TDRD510083.734ENSOARG00000017299TDRD510083.734Ovis_aries
ENSG00000162782TDRD510099.796ENSPPAG00000034442TDRD510099.034Pan_paniscus
ENSG00000162782TDRD510085.031ENSPPRG00000020775TDRD510085.031Panthera_pardus
ENSG00000162782TDRD59984.275ENSPTIG00000019375TDRD59984.275Panthera_tigris_altaica
ENSG00000162782TDRD510099.796ENSPTRG00000001732TDRD510099.034Pan_troglodytes
ENSG00000162782TDRD510093.340ENSPANG00000021218TDRD510093.340Papio_anubis
ENSG00000162782TDRD57535.398ENSPKIG00000003193-8335.398Paramormyrops_kingsleyae
ENSG00000162782TDRD55953.596ENSPSIG00000010940TDRD59553.596Pelodiscus_sinensis
ENSG00000162782TDRD55942.544ENSPMGG00000017309-7740.741Periophthalmus_magnuspinnatus
ENSG00000162782TDRD510064.909ENSPCIG00000011517TDRD510065.484Phascolarctos_cinereus
ENSG00000162782TDRD56934.648ENSPFOG00000015890-9934.648Poecilia_formosa
ENSG00000162782TDRD57133.069ENSPLAG00000012088-9633.069Poecilia_latipinna
ENSG00000162782TDRD56933.424ENSPMEG00000015988-7933.424Poecilia_mexicana
ENSG00000162782TDRD57034.037ENSPREG00000012178-9533.778Poecilia_reticulata
ENSG00000162782TDRD510092.355ENSPPYG00000000460TDRD510092.355Pongo_abelii
ENSG00000162782TDRD510084.302ENSPCOG00000017971TDRD510084.302Propithecus_coquereli
ENSG00000162782TDRD510080.570ENSPVAG00000012203TDRD510080.570Pteropus_vampyrus
ENSG00000162782TDRD56932.545ENSPNYG00000014549-8532.545Pundamilia_nyererei
ENSG00000162782TDRD59932.572ENSPNAG00000020990-7536.917Pygocentrus_nattereri
ENSG00000162782TDRD59978.161ENSRNOG00000004018Tdrd59884.892Rattus_norvegicus
ENSG00000162782TDRD510095.923ENSRBIG00000027790TDRD510095.923Rhinopithecus_bieti
ENSG00000162782TDRD510095.923ENSRROG00000045389TDRD510095.923Rhinopithecus_roxellana
ENSG00000162782TDRD510091.884ENSSBOG00000007387TDRD510091.884Saimiri_boliviensis_boliviensis
ENSG00000162782TDRD510065.777ENSSHAG00000001552TDRD510066.349Sarcophilus_harrisii
ENSG00000162782TDRD56341.553ENSSFOG00015018451-9941.553Scleropages_formosus
ENSG00000162782TDRD56933.241ENSSMAG00000020999-8833.241Scophthalmus_maximus
ENSG00000162782TDRD57035.054ENSSDUG00000010066-8933.969Seriola_dumerili
ENSG00000162782TDRD57034.979ENSSLDG00000001877-9133.890Seriola_lalandi_dorsalis
ENSG00000162782TDRD56850.882ENSSPUG00000017982TDRD59751.180Sphenodon_punctatus
ENSG00000162782TDRD56933.380ENSSPAG00000006013-8633.380Stegastes_partitus
ENSG00000162782TDRD58184.688ENSSSCG00000015527TDRD59984.688Sus_scrofa
ENSG00000162782TDRD56935.007ENSTRUG00000001601-8235.007Takifugu_rubripes
ENSG00000162782TDRD56734.375ENSTNIG00000010172-9934.524Tetraodon_nigroviridis
ENSG00000162782TDRD510080.652ENSTTRG00000013250TDRD510080.652Tursiops_truncatus
ENSG00000162782TDRD59886.128ENSUMAG00000020642TDRD59986.128Ursus_maritimus
ENSG00000162782TDRD510083.719ENSVVUG00000012444TDRD510083.719Vulpes_vulpes
ENSG00000162782TDRD59934.943ENSXETG00000029942TDRD59942.493Xenopus_tropicalis
ENSG00000162782TDRD56733.876ENSXMAG00000026146-8333.876Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0007286spermatid development-ISSProcess
GO:0030719P granule organization-ISSProcess
GO:0033391chromatoid body-ISSComponent
GO:0043046DNA methylation involved in gamete generation-ISSProcess
GO:0071546pi-body-ISSComponent
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