EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
14587024Scaffold attachment factors SAFB1 and SAFB2: Innocent bystanders or critical players in breast tumorigenesis?J Cell Biochem2003 Nov 1Oesterreich S-
18772145Identification of proteins binding to E-Box/Ku86 sites and function of the tumor suppressor SAFB1 in transcriptional regulation of the human xanthine oxidoreductase gene.J Biol Chem2008 Oct 31Lin Jdoi: 10.1074/jbc.M802076200
19137425Low SAFB levels are associated with worse outcome in breast cancer patients.Breast Cancer Res Treat2010 JunHammerich-Hille Sdoi: 10.1007/s10549-008-0297-6
19077293No germline mutations in supposed tumour suppressor genes SAFB1 and SAFB2 in familial breast cancer with linkage to 19p.BMC Med Genet2008 Dec 13Bergman Adoi: 10.1186/1471-2350-9-108.

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr195626451Missense_MutationnovelS79F0.19
BLCAchr195657266Missense_MutationnovelS594L0.28
BLCAchr195661525Missense_MutationnovelR624C0.29
BLCAchr195626472Nonsense_MutationnovelS86*0.15
BLCAchr195668265Missense_MutationnovelD908H0.12
BLCAchr195668265Missense_Mutationrs756589107D908N0.34
BLCAchr195668184Missense_Mutationrs778094826G881R0.38
BLCAchr1956683893'UTRnovel0.44
BLCAchr195653155Missense_MutationnovelG445A0.42
BLCAchr195654134Missense_MutationnovelE534K0.06
BLCAchr195654382Missense_Mutationrs751387449E561K0.08
BLCAchr195668265Missense_MutationnovelD908Y0.15
BRCAchr195664416Missense_MutationNAM771L0.26
BRCAchr195654068Missense_MutationNAN512D0.69
BRCAchr195653365Missense_MutationNAT491S0.52
BRCAchr195641902Missense_Mutationrs770745797E168K0.28
BRCAchr195641883Silentrs747968577S161S0.34
BRCAchr195657310Missense_MutationNAK609E0.37
CESCchr195667841Missense_Mutationrs755838374G858A0.38
CESCchr195654174Missense_MutationnovelS547L0.21
CESCchr195641845Missense_Mutationrs754213071E149K0.44
CESCchr195653168Nonsense_MutationnovelY449*0.19
CESCchr195641850Silentrs757607710D150D0.38
CESCchr195661786Missense_MutationnovelR711W0.49
CESCchr195667104Frame_Shift_DelNAG800Afs*80.14
CESCchr195653392Frame_Shift_DelnovelK501Rfs*640.5
CESCchr195654174Nonsense_MutationnovelS547*0.32
CESCchr195651045Silentrs777904505L422L0.25
CESCchr195641623Missense_MutationnovelD102H0.43
COADchr195667375Nonsense_MutationnovelR826*0.24
COADchr195650990In_Frame_Delrs762859329G405del0.28
COADchr195654179Nonsense_MutationnovelR549*0.24
COADchr195623286SilentnovelG27G0.29
COADchr195641842Missense_MutationnovelV148I0.37
COADchr195661760Missense_Mutationrs765557822Y702C0.21
COADchr195664093Missense_Mutationrs138286283R742H0.35
COADchr195667355Missense_MutationnovelR819H0.28
COADchr1956683703'UTRnovel0.7
COADchr195661598Missense_MutationNAA648V0.38
COADchr195641908Missense_MutationnovelE170K0.25
COADchr1956683703'UTRnovel0.5
COADchr195653231Silentrs541754798T470T0.43
COADchr195654417SilentnovelV572V0.13
COADchr195664053Missense_MutationNAR729W0.2
COADchr195661558Missense_MutationNAA635S0.36
COADchr1956683703'UTRnovel0.36
COADchr195661525Missense_MutationnovelR624C0.08
COADchr195667104Frame_Shift_DelNAG800Afs*80.41
COADchr195667361Frame_Shift_DelNAD823Tfs*190.2
COADchr195649943Missense_Mutationrs575162668S389L0.21
COADchr195667358Missense_MutationnovelD820G0.07
COADchr195661699Missense_MutationNAR682C0.56
COADchr1956684253'UTRnovel1
COADchr195623225Missense_MutationNAG7V0.31
ESCAchr195661525Missense_MutationnovelR624C0.16
ESCAchr195653388Silentrs749049469D498D0.39
ESCAchr195661728SilentnovelR691R0.08
ESCAchr195661780Missense_MutationnovelA709T0.1
ESCAchr195641925Silentrs758696281P175P0.25
GBMchr195664428Nonsense_MutationNAR775*0.25
GBMchr195667824Silentrs148221587G852G0.49
GBMchr195648052Intronnovel0.39
GBMchr195668166Missense_Mutationrs781691891G875S0.05
HNSCchr195664414Nonsense_MutationnovelS770*0.27
HNSCchr195654175SilentnovelS547S0.49
HNSCchr195657256Missense_MutationnovelD591N0.27
HNSCchr195657257Missense_MutationnovelD591A0.27
HNSCchr195661601Missense_MutationnovelR649Q0.15
HNSCchr195641782Missense_MutationnovelI128V0.37
HNSCchr195649933Missense_Mutationrs200348280E386K0.11
HNSCchr195626451Missense_MutationnovelS79F0.07
HNSCchr195664429Missense_MutationnovelR775Q0.11
HNSCchr195667055Missense_MutationnovelE782K0.11
HNSCchr195664408Nonsense_MutationnovelS768*0.24
HNSCchr195668265Missense_Mutationrs756589107D908N0.4
HNSCchr195641935Nonsense_MutationnovelQ179*0.5
KIRCchr1956683423'UTRnovel0.38
KIRCchr195641830Missense_Mutationrs753148563V144I0.61
KIRPchr195653137Missense_MutationNAT439I0.32
KIRPchr195664074Missense_MutationnovelY736H0.5
KIRPchr1956683833'UTRnovel0.54
LGGchr195648064Intronnovel0.06
LIHCchr195661668SilentnovelR671R0.08
LIHCchr1956683703'UTRnovel0.35
LIHCchr195653388Silentrs749049469D498D0.28
LIHCchr195645339Missense_MutationnovelI183M0.26
LUADchr195661708Missense_MutationnovelE685K0.27
LUADchr195651048Missense_MutationNAK423N0.24
LUADchr195654139Missense_MutationNAK535N0.48
LUSCchr195668195SilentnovelR884R0.22
LUSCchr195664110Missense_Mutationrs754569943D748N0.06
LUSCchr195664425Missense_MutationNAE774Q0.29
LUSCchr195661601Missense_MutationnovelR649Q0.28
LUSCchr195641778Silentrs764882015I126I0.12
LUSCchr195661775In_Frame_DelnovelR707_D715delinsH0.13
OVchr195641830Missense_Mutationrs753148563V144I0.34
OVchr195641920Missense_MutationnovelL174I0.06
OVchr1956683513'UTRnovel0.83
OVchr195668280Missense_MutationNAR913G0.35
PAADchr195654152Missense_MutationnovelD540N0.09
PAADchr195641858Missense_MutationnovelA153D0.18
PRADchr195664397Missense_MutationnovelR764S0.23
READchr195645344Missense_MutationNAD185G0.31
READchr195651064Missense_MutationNAY429H0.76
READchr195648205Intronnovel0.44
READchr195641901Silentrs762779310V167V0.2
READchr195657348Splice_SiteNAX621_splice0.08
SARCchr195667081Silentrs373577698H790H0.23
SKCMchr195653160Missense_MutationnovelR447C0.15
SKCMchr195661599SilentnovelA648A0.44
SKCMchr195667157Missense_MutationnovelP816S0.27
SKCMchr195667848SilentNAS860S0.16
SKCMchr195648032Missense_MutationNAS209F0.3
SKCMchr195667157Missense_MutationnovelP816S0.38
SKCMchr195653254Missense_MutationNAS478F0.47
SKCMchr1956684243'UTRnovel1
SKCMchr195623320Silentrs762619043L39L0.36
SKCMchr195667070Missense_MutationnovelP787S0.37
SKCMchr195667119Missense_MutationNAS803F0.17
SKCMchr195667154Missense_MutationNAP815S0.5
SKCMchr195653144SilentNAA441A0.13
SKCMchr195651057SilentNAF426F0.13
STADchr1956683703'UTRnovel0.44
STADchr195667081Silentrs373577698H790H0.24
STADchr195661531Missense_Mutationrs140739982R626C0.2
STADchr195667104Frame_Shift_DelNAG800Afs*80.21
STADchr195667104Frame_Shift_DelNAG800Afs*80.49
STADchr195661742Missense_MutationNAR696H0.31
STADchr195668273SilentNAR910R0.43
STADchr195667156Frame_Shift_InsnovelR818Qfs*30.32
STADchr1956683703'UTRnovel0.42
STADchr195667104Frame_Shift_DelNAG800Afs*80.36
STADchr1956683703'UTRnovel0.29
STADchr195657295Missense_MutationnovelS604T0.61
STADchr1956683703'UTRnovel0.33
STADchr195667104Frame_Shift_DelNAG800Afs*80.13
STADchr195667058Missense_MutationNAR783C0.16
STADchr1956683703'UTRnovel0.5
TGCTchr195667107Missense_MutationnovelG799V0.19
THYMchr195667344Intronnovel0.13
THYMchr195667059Missense_Mutationrs368894379R783H0.21
UCECchr1956683703'UTRnovel0.27
UCECchr195653188Missense_MutationNAT456I0.39
UCECchr195654186Missense_Mutationrs188904085R551Q0.37
UCECchr195657288Silentrs151067758S601S0.27
UCECchr1956683173'UTRrs7471629690.38
UCECchr195651003Missense_MutationnovelF408L0.15
UCECchr195664156Missense_MutationnovelD763G0.13
UCECchr195664090Frame_Shift_Insrs369219386R742Pfs*90.43
UCECchr195641745SilentnovelD115D0.42
UCECchr195654089Missense_MutationnovelC519R0.42
UCECchr195626455SilentnovelE80E0.19
UCECchr195648152Intronnovel0.37
UCECchr195668163Missense_MutationNAR874C0.3
UCECchr195654407Missense_MutationnovelS569F0.39
UCECchr195661807Missense_MutationnovelR718W0.44
UCECchr195667076Missense_MutationnovelR789C0.37
UCECchr195654385Missense_MutationNAR562W0.41
UCECchr195654424Missense_MutationNAI575V0.47
UCECchr195626434Silentrs760922137D73D0.26
UCECchr195641837Frame_Shift_InsnovelD146Efs*110.04
UCECchr195650980Missense_MutationnovelR401C0.18
UCECchr195654373Nonsense_MutationNAR558*0.17
UCECchr195667390Missense_MutationNAR831W0.57
UCECchr195668284Missense_Mutationrs754159539R914H0.39
UCECchr1956231965'UTRnovel0.25
UCECchr195661748Missense_MutationnovelQ698R0.39
UCECchr195654437Missense_MutationnovelT579M0.33
UCECchr195661609Missense_MutationnovelL652M0.36
UCECchr195667390Missense_MutationNAR831W0.45
UCECchr195650980Missense_MutationnovelR401C0.15
UCECchr195653231Silentrs541754798T470T0.45
UCECchr195651023Missense_MutationnovelS415Y0.48
UCECchr1956683483'UTRnovel0.1
UCECchr195667103Frame_Shift_Insrs747412640Y801Lfs*40.26
UCECchr195667363Missense_MutationNAG822W0.38
UCECchr195661548SilentNAQ631Q0.41
UCECchr195667447Nonsense_MutationnovelQ850*0.42
UCECchr195641844Silentrs745473423V148V0.22
UCECchr195664408Nonsense_MutationnovelS768*0.35
UCECchr195649932Silentrs75289952P385P0.37
UCECchr195664053Missense_MutationNAR729W0.45
UCECchr195650980Missense_MutationnovelR401C0.38
UCECchr195667104Frame_Shift_DelNAG800Afs*80.5
UCECchr195654373Nonsense_MutationNAR558*0.26
UCECchr195667104Frame_Shift_DelNAG800Afs*80.36
UCECchr195661572Silentrs769414838R639R0.5
UCECchr195667093SilentnovelS794S0.37
UCECchr195661578SilentnovelE641E0.27
UCECchr195668163Missense_MutationNAR874C0.33
UCECchr1956683053'UTRnovel0.14
UCECchr195654424Missense_MutationNAI575V0.16
UCECchr195654373Nonsense_MutationNAR558*0.37
UCECchr195645348Missense_MutationNAK186N0.32
UCECchr195641778Silentrs764882015I126I0.34
UCECchr195654408SilentnovelS569S0.16
UCECchr195668183Silentrs555050155G880G0.54
UCECchr195664075Missense_MutationnovelY736C0.43
UCECchr195664053Missense_MutationNAR729W0.44
UCECchr1956683703'UTRnovel0.46
UCSchr195661681Missense_MutationnovelV676M0.45

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
PAADDEL0.13590.0060878
READDEL0.11520.23023
THCADEL0.0120.10598

Survival Analysis
CancerP-value Q-value
THYM0.012

Kaplan-Meier Survival Analysis

KIRC0.026

Kaplan-Meier Survival Analysis

STAD0.0063

Kaplan-Meier Survival Analysis

ACC0.0001

Kaplan-Meier Survival Analysis

TGCT0.043

Kaplan-Meier Survival Analysis

KIRP0.01

Kaplan-Meier Survival Analysis

PAAD0.0001

Kaplan-Meier Survival Analysis

BLCA0.00081

Kaplan-Meier Survival Analysis

CESC0.014

Kaplan-Meier Survival Analysis

UCEC0.0054

Kaplan-Meier Survival Analysis

LIHC0.0094

Kaplan-Meier Survival Analysis

UVM0.016

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000160633 (Gene tree)
Gene ID
6294
Gene Symbol
SAFB
Alias
HET|SAFB1
Full Name
scaffold attachment factor B
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
45,444 bases
Position
chr19:5,623,035-5,668,478
Accession
10520
RBP type
canonical RBP
Summary
This gene encodes a DNA-binding protein which has high specificity for scaffold or matrix attachment region DNA elements (S/MAR DNA). This protein is thought to be involved in attaching the base of chromatin loops to the nuclear matrix but there is conflicting evidence as to whether this protein is a component of chromatin or a nuclear matrix protein. Scaffold attachment factors are a specific subset of nuclear matrix proteins (NMP) that specifically bind to S/MAR. The encoded protein is thought to serve as a molecular base to assemble a 'transcriptosome complex' in the vicinity of actively transcribed genes. It is involved in the regulation of heat shock protein 27 transcription, can act as an estrogen receptor co-repressor and is a candidate for breast tumorigenesis. This gene is arranged head-to-head with a similar gene whose product has the same functions. Multiple transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Jan 2011]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000415895RRM_5PF13893.61e-0611
ENSP00000292123RRM_5PF13893.61.1e-0611
ENSP00000464840RRM_5PF13893.61.1e-0611
ENSP00000467423RRM_5PF13893.61.1e-0611
ENSP00000415895RRM_1PF00076.221.2e-1211
ENSP00000292123RRM_1PF00076.221.2e-1211
ENSP00000467423RRM_1PF00076.221.2e-1211
ENSP00000464840RRM_1PF00076.221.2e-1211
ENSP00000415895SAPPF02037.273.4e-0911
ENSP00000292123SAPPF02037.273.8e-0911
ENSP00000464840SAPPF02037.273.8e-0911
ENSP00000467423SAPPF02037.273.8e-0911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
11431691Fusion of two novel genes, RBM15 and MKL1, in the t(1;22)(p13;q13) of acute megakaryoblastic leukemia.Nat Genet2001 JulMa Z-
29887524Scaffold attachment factor B suppresses HIV-1 infection of CD4+ T cells by preventing binding of RNA polymerase II to HIV-1's long terminal repeat.J Biol Chem2018 Aug 3Ma Ldoi: 10.1074/jbc.RA118.002018
26273616Unravelling the RNA-Binding Properties of SAFB Proteins in Breast Cancer Cells.Biomed Res Int2015Hong Edoi: 10.1155/2015/395816
17630952A novel member of the SAF (scaffold attachment factor)-box protein family inhibits gene expression and induces apoptosis.Biochem J2007 Nov 1Chan CW-
26694817iCLIP identifies novel roles for SAFB1 in regulating RNA processing and neuronal function.BMC Biol2015 Dec 22Rivers Cdoi: 10.1186/s12915-015-0220-7.
17643427SAFB re-distribution marks steps of the apoptotic process.Exp Cell Res2007 Nov 1Lee YB-
10212141A novel hnRNP protein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock.J Cell Sci1999 MayWeighardt F-
12215442Binding of p190RhoGEF to a destabilizing element on the light neurofilament mRNA is competed by BC1 RNA.J Biol Chem2002 Nov 8Ge W-
10899586Cloning and recombinant expression of the La RNA-binding protein from Trypanosoma brucei.Biochim Biophys Acta2000 Jul 24Westermann S-
17200140Alternative RNA splicing complexes containing the scaffold attachment factor SAFB2.J Cell Sci2007 Jan 15Sergeant KA-
25800734The chromatin scaffold protein SAFB1 localizes SUMO-1 to the promoters of ribosomal protein genes to facilitate transcription initiation and splicing.Nucleic Acids Res2015 Apr 20Liu HWdoi: 10.1093/nar/gkv246
27888239The increasing diversity of functions attributed to the SAFB family of RNA-/DNA-binding proteins.Biochem J2016 Dec 1Norman M-
9087430Involvement of the carboxyl terminus of vertebrate poly(A) polymerase in U1A autoregulation and in the coupling of splicing and polyadenylation.Genes Dev1997 Mar 15Gunderson SI-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000589006SAFB-206459-ENSP00000464758153 (aa)-K7EII0
ENST00000292123SAFB-2013042-ENSP00000292123915 (aa)-Q15424
ENST00000591991SAFB-2103471--- (aa)--
ENST00000588852SAFB-2052842-ENSP00000467423917 (aa)-Q15424
ENST00000590485SAFB-208548--- (aa)--
ENST00000592555SAFB-2131360--- (aa)--
ENST00000592707SAFB-214940--- (aa)--
ENST00000589863SAFB-2072708-ENSP00000468543106 (aa)-K7ES42
ENST00000454510SAFB-2022650XM_017027114ENSP00000415895848 (aa)XP_016882603Q15424
ENST00000586281SAFB-203397--- (aa)--
ENST00000592224SAFB-2113014-ENSP00000464840916 (aa)-Q15424
ENST00000591666SAFB-209632--- (aa)--
ENST00000592396SAFB-212620--- (aa)--
ENST00000586934SAFB-204995--- (aa)--
Gene Model
Click here to download ENSG00000160633's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000160633Blood Pressure5.6630000E-005-
ENSG00000160633Platelet Function Tests6.9700000E-007-
ENSG00000160633Platelet Function Tests6.9000000E-007-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000160633's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000160633SAFB6564.486ENSG00000137776SLTM9435.535
ENSG00000160633SAFB10069.874ENSG00000130254SAFB29869.313
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000160633SAFB9547.802ENSAPOG00000022508safb6543.291Acanthochromis_polyacanthus
ENSG00000160633SAFB10092.174ENSAMEG00000012254SAFB9892.076Ailuropoda_melanoleuca
ENSG00000160633SAFB9440.112ENSACIG00000006247safb9543.523Amphilophus_citrinellus
ENSG00000160633SAFB9547.802ENSAOCG00000006308safb7142.834Amphiprion_ocellaris
ENSG00000160633SAFB9547.802ENSAPEG00000023342safb6642.882Amphiprion_percula
ENSG00000160633SAFB7863.115ENSATEG00000004998safb6642.400Anabas_testudineus
ENSG00000160633SAFB8963.528ENSAPLG00000006355-9964.839Anas_platyrhynchos
ENSG00000160633SAFB9365.668ENSAPLG00000005780-10064.821Anas_platyrhynchos
ENSG00000160633SAFB8070.161ENSACAG00000016893-9552.168Anolis_carolinensis
ENSG00000160633SAFB10098.253ENSANAG00000028821SAFB10098.253Aotus_nancymaae
ENSG00000160633SAFB7862.295ENSACLG00000001926safb6442.998Astatotilapia_calliptera
ENSG00000160633SAFB8557.447ENSAMXG00000018154safb9444.382Astyanax_mexicanus
ENSG00000160633SAFB10088.877ENSBTAG00000007875SAFB10088.877Bos_taurus
ENSG00000160633SAFB8892.473ENSBTAG00000051794-9190.164Bos_taurus
ENSG00000160633SAFB10093.464ENSCJAG00000017081SAFB10098.881Callithrix_jacchus
ENSG00000160633SAFB10093.457ENSCAFG00000018803SAFB8793.457Canis_familiaris
ENSG00000160633SAFB10093.457ENSCAFG00020018943SAFB10093.457Canis_lupus_dingo
ENSG00000160633SAFB10087.459ENSCHIG00000007262SAFB9892.453Capra_hircus
ENSG00000160633SAFB8862.500ENSTSYG00000001851-10076.514Carlito_syrichta
ENSG00000160633SAFB9371.542ENSCAPG00000012121SAFB7783.557Cavia_aperea
ENSG00000160633SAFB10087.473ENSCPOG00000026322SAFB10087.261Cavia_porcellus
ENSG00000160633SAFB10098.703ENSCCAG00000020193SAFB10098.703Cebus_capucinus
ENSG00000160633SAFB10099.345ENSCATG00000029994SAFB10099.345Cercocebus_atys
ENSG00000160633SAFB10088.486ENSCLAG00000007734SAFB10089.872Chinchilla_lanigera
ENSG00000160633SAFB10099.236ENSCSAG00000009949SAFB10099.236Chlorocebus_sabaeus
ENSG00000160633SAFB10090.909ENSCHOG00000003208SAFB9392.857Choloepus_hoffmanni
ENSG00000160633SAFB9165.325ENSCPBG00000010928-9964.573Chrysemys_picta_bellii
ENSG00000160633SAFB7877.686ENSCPBG00000010936-9961.808Chrysemys_picta_bellii
ENSG00000160633SAFB100100.000ENSCANG00000004774-100100.000Colobus_angolensis_palliatus
ENSG00000160633SAFB10092.576ENSCANG00000019754-10092.467Colobus_angolensis_palliatus
ENSG00000160633SAFB10083.493ENSCGRG00001002254Safb10083.582Cricetulus_griseus_chok1gshd
ENSG00000160633SAFB8193.600ENSCGRG00000011529Safb9680.871Cricetulus_griseus_crigri
ENSG00000160633SAFB9343.354ENSCSEG00000019870safb6942.883Cynoglossus_semilaevis
ENSG00000160633SAFB7662.791ENSCVAG00000002226safb9439.763Cyprinodon_variegatus
ENSG00000160633SAFB9242.421ENSDARG00000020467safb9944.528Danio_rerio
ENSG00000160633SAFB10092.157ENSDNOG00000015746SAFB9592.530Dasypus_novemcinctus
ENSG00000160633SAFB10082.503ENSDORG00000016200Safb10082.839Dipodomys_ordii
ENSG00000160633SAFB8085.507ENSETEG00000018679SAFB8585.507Echinops_telfairi
ENSG00000160633SAFB10088.829ENSEASG00005023019SAFB10088.829Equus_asinus_asinus
ENSG00000160633SAFB10090.840ENSECAG00000018659SAFB8990.949Equus_caballus
ENSG00000160633SAFB7864.228ENSELUG00000022327safb5955.000Esox_lucius
ENSG00000160633SAFB10093.246ENSFCAG00000011835SAFB10093.246Felis_catus
ENSG00000160633SAFB10065.591ENSFALG00000013882-8964.856Ficedula_albicollis
ENSG00000160633SAFB9159.842ENSFALG00000013881-9960.722Ficedula_albicollis
ENSG00000160633SAFB10083.333ENSFDAG00000020306SAFB10088.732Fukomys_damarensis
ENSG00000160633SAFB7762.810ENSFHEG00000004219safb9441.756Fundulus_heteroclitus
ENSG00000160633SAFB6962.963ENSGMOG00000014280safb9541.432Gadus_morhua
ENSG00000160633SAFB10065.231ENSGALG00000013365-9764.961Gallus_gallus
ENSG00000160633SAFB10062.055ENSGALG00000001948-9763.472Gallus_gallus
ENSG00000160633SAFB7661.719ENSGAFG00000016162safb6739.267Gambusia_affinis
ENSG00000160633SAFB7863.934ENSGACG00000011385safb6740.916Gasterosteus_aculeatus
ENSG00000160633SAFB7283.036ENSGAGG00000017702-10058.260Gopherus_agassizii
ENSG00000160633SAFB7880.165ENSGAGG00000008424-9763.404Gopherus_agassizii
ENSG00000160633SAFB100100.000ENSGGOG00000015109SAFB100100.000Gorilla_gorilla
ENSG00000160633SAFB9539.858ENSHBUG00000009218safb7042.757Haplochromis_burtoni
ENSG00000160633SAFB10090.471ENSHGLG00000015883SAFB10090.568Heterocephalus_glaber_female
ENSG00000160633SAFB10084.783ENSHGLG00100004228SAFB7789.401Heterocephalus_glaber_male
ENSG00000160633SAFB8855.102ENSHCOG00000001705safb9641.065Hippocampus_comes
ENSG00000160633SAFB8660.000ENSIPUG00000024869safb29746.536Ictalurus_punctatus
ENSG00000160633SAFB9390.460ENSSTOG00000002783SAFB10090.564Ictidomys_tridecemlineatus
ENSG00000160633SAFB10085.547ENSJJAG00000009021Safb10085.987Jaculus_jaculus
ENSG00000160633SAFB7865.574ENSKMAG00000022308safb9542.974Kryptolebias_marmoratus
ENSG00000160633SAFB7863.115ENSLBEG00000006015safb6544.481Labrus_bergylta
ENSG00000160633SAFB7554.237ENSLACG00000018090SAFB10053.830Latimeria_chalumnae
ENSG00000160633SAFB7867.213ENSLOCG00000003613safb9058.407Lepisosteus_oculatus
ENSG00000160633SAFB9990.533ENSLAFG00000003840SAFB10089.336Loxodonta_africana
ENSG00000160633SAFB10099.346ENSMFAG00000003885SAFB10099.346Macaca_fascicularis
ENSG00000160633SAFB10099.345ENSMMUG00000017970SAFB10099.345Macaca_mulatta
ENSG00000160633SAFB10099.057ENSMNEG00000035637SAFB10099.057Macaca_nemestrina
ENSG00000160633SAFB10099.057ENSMLEG00000038637SAFB10099.057Mandrillus_leucophaeus
ENSG00000160633SAFB7862.295ENSMAMG00000003357safb6040.968Mastacembelus_armatus
ENSG00000160633SAFB7862.295ENSMZEG00005009120safb6643.450Maylandia_zebra
ENSG00000160633SAFB9764.103ENSMGAG00000001101-10063.434Meleagris_gallopavo
ENSG00000160633SAFB8168.000ENSMGAG00000001051-9760.745Meleagris_gallopavo
ENSG00000160633SAFB8193.600ENSMAUG00000005013Safb10090.760Mesocricetus_auratus
ENSG00000160633SAFB9986.667ENSMICG00000034927-7796.739Microcebus_murinus
ENSG00000160633SAFB8892.473ENSMICG00000046795-9892.553Microcebus_murinus
ENSG00000160633SAFB10092.344ENSMICG00000008739-10091.519Microcebus_murinus
ENSG00000160633SAFB10084.026ENSMOCG00000014040Safb10084.026Microtus_ochrogaster
ENSG00000160633SAFB7556.098ENSMMOG00000020366-6552.381Mola_mola
ENSG00000160633SAFB10075.558ENSMODG00000001236SAFB9876.118Monodelphis_domestica
ENSG00000160633SAFB7864.754ENSMALG00000020330safb7042.097Monopterus_albus
ENSG00000160633SAFB10084.255MGP_CAROLIEiJ_G0021780Safb10084.255Mus_caroli
ENSG00000160633SAFB10084.362ENSMUSG00000071054Safb10084.362Mus_musculus
ENSG00000160633SAFB10084.166MGP_PahariEiJ_G0020769Safb10084.166Mus_pahari
ENSG00000160633SAFB10092.702ENSMPUG00000006123SAFB9492.702Mustela_putorius_furo
ENSG00000160633SAFB10091.068ENSMLUG00000001081SAFB10091.068Myotis_lucifugus
ENSG00000160633SAFB10082.185ENSNGAG00000019882Safb10082.185Nannospalax_galili
ENSG00000160633SAFB7554.651ENSNBRG00000000496-8154.651Neolamprologus_brichardi
ENSG00000160633SAFB9699.658ENSNLEG00000013551SAFB10099.658Nomascus_leucogenys
ENSG00000160633SAFB8193.548ENSOPRG00000011561-10085.468Ochotona_princeps
ENSG00000160633SAFB10090.502ENSODEG00000014838SAFB10090.502Octodon_degus
ENSG00000160633SAFB7861.475ENSONIG00000002318safb6643.528Oreochromis_niloticus
ENSG00000160633SAFB9081.490ENSOCUG00000014628SAFB6585.261Oryctolagus_cuniculus
ENSG00000160633SAFB7864.463ENSORLG00000016989safb6639.365Oryzias_latipes
ENSG00000160633SAFB9440.662ENSORLG00020000404safb9839.326Oryzias_latipes_hni
ENSG00000160633SAFB7863.934ENSORLG00015010733safb6639.524Oryzias_latipes_hsok
ENSG00000160633SAFB7862.810ENSOMEG00000009066safb6739.652Oryzias_melastigma
ENSG00000160633SAFB10090.672ENSOGAG00000027769SAFB10090.022Otolemur_garnettii
ENSG00000160633SAFB10084.967ENSOARG00000007662-10084.423Ovis_aries
ENSG00000160633SAFB7882.353ENSOARG00000007856-10082.073Ovis_aries
ENSG00000160633SAFB100100.000ENSPPAG00000035129SAFB100100.000Pan_paniscus
ENSG00000160633SAFB10093.246ENSPPRG00000017197SAFB10093.246Panthera_pardus
ENSG00000160633SAFB100100.000ENSPTRG00000010335SAFB100100.000Pan_troglodytes
ENSG00000160633SAFB10099.237ENSPANG00000007770SAFB10099.237Papio_anubis
ENSG00000160633SAFB9543.133ENSPKIG00000009902safb6745.997Paramormyrops_kingsleyae
ENSG00000160633SAFB9961.684ENSPSIG00000009367-9761.255Pelodiscus_sinensis
ENSG00000160633SAFB10062.211ENSPSIG00000011679-10063.585Pelodiscus_sinensis
ENSG00000160633SAFB7560.241ENSPMGG00000015973-6161.972Periophthalmus_magnuspinnatus
ENSG00000160633SAFB10084.632ENSPEMG00000020428Safb10084.632Peromyscus_maniculatus_bairdii
ENSG00000160633SAFB8884.559ENSPCIG00000009504-9982.766Phascolarctos_cinereus
ENSG00000160633SAFB7665.254ENSPFOG00000007745safb9441.507Poecilia_formosa
ENSG00000160633SAFB7661.719ENSPLAG00000001614safb9540.185Poecilia_latipinna
ENSG00000160633SAFB7661.719ENSPMEG00000021023safb9841.455Poecilia_mexicana
ENSG00000160633SAFB7662.500ENSPREG00000012496safb9541.176Poecilia_reticulata
ENSG00000160633SAFB10099.672ENSPPYG00000009428SAFB10099.672Pongo_abelii
ENSG00000160633SAFB10086.645ENSPCAG00000006475SAFB10086.645Procavia_capensis
ENSG00000160633SAFB10087.736ENSPCOG00000010436-9487.736Propithecus_coquereli
ENSG00000160633SAFB10088.498ENSPCOG00000014090SAFB10088.146Propithecus_coquereli
ENSG00000160633SAFB10086.024ENSPVAG00000004913SAFB10084.406Pteropus_vampyrus
ENSG00000160633SAFB9345.394ENSPNAG00000021838safb9745.455Pygocentrus_nattereri
ENSG00000160633SAFB10084.166ENSRNOG00000050543Safb10084.803Rattus_norvegicus
ENSG00000160633SAFB100100.000ENSRBIG00000042509SAFB100100.000Rhinopithecus_bieti
ENSG00000160633SAFB100100.000ENSRROG00000029278SAFB100100.000Rhinopithecus_roxellana
ENSG00000160633SAFB10098.703ENSSBOG00000026291SAFB10098.703Saimiri_boliviensis_boliviensis
ENSG00000160633SAFB9544.647ENSSFOG00015008156safb9546.587Scleropages_formosus
ENSG00000160633SAFB7860.656ENSSMAG00000009316safb6642.381Scophthalmus_maximus
ENSG00000160633SAFB7864.754ENSSDUG00000009652safb7241.158Seriola_dumerili
ENSG00000160633SAFB7866.393ENSSLDG00000001670safb6541.838Seriola_lalandi_dorsalis
ENSG00000160633SAFB9385.246ENSSARG00000010475SAFB10085.246Sorex_araneus
ENSG00000160633SAFB9172.143ENSSPUG00000009747-9958.426Sphenodon_punctatus
ENSG00000160633SAFB8259.227ENSSPUG00000009820-9962.162Sphenodon_punctatus
ENSG00000160633SAFB9249.425ENSSPAG00000015682safb6940.931Stegastes_partitus
ENSG00000160633SAFB10092.465ENSSSCG00000013522SAFB9993.702Sus_scrofa
ENSG00000160633SAFB9362.073ENSTGUG00000000489-9764.554Taeniopygia_guttata
ENSG00000160633SAFB9664.653ENSTGUG00000000502-9765.052Taeniopygia_guttata
ENSG00000160633SAFB7863.115ENSTRUG00000003567safb9843.243Takifugu_rubripes
ENSG00000160633SAFB8756.322ENSTNIG00000015470safb9056.322Tetraodon_nigroviridis
ENSG00000160633SAFB7490.977ENSTBEG00000013124-6690.977Tupaia_belangeri
ENSG00000160633SAFB9498.413ENSTTRG00000013588SAFB9298.413Tursiops_truncatus
ENSG00000160633SAFB9292.233ENSUAMG00000024667-8892.233Ursus_americanus
ENSG00000160633SAFB8896.324ENSUAMG00000024543SAFB10089.740Ursus_americanus
ENSG00000160633SAFB8897.849ENSUMAG00000009734SAFB9791.115Ursus_maritimus
ENSG00000160633SAFB7394.531ENSVPAG00000012043SAFB7994.531Vicugna_pacos
ENSG00000160633SAFB10093.355ENSVVUG00000013720SAFB8793.355Vulpes_vulpes
ENSG00000160633SAFB8162.069ENSXETG00000008755safb9162.385Xenopus_tropicalis
ENSG00000160633SAFB7855.294ENSXCOG00000010246-6662.687Xiphophorus_couchianus
ENSG00000160633SAFB7661.719ENSXMAG00000003458safb9441.388Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding-ISSFunction
GO:0003682chromatin binding-ISSFunction
GO:0003690double-stranded DNA binding1324173.TASFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding12660241.14559993.19282290.19674106.20562859.21130767.21900206.27731383.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0006325chromatin organization1324173.TASProcess
GO:0006357regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0030520intracellular estrogen receptor signaling pathway21873635.IBAProcess
GO:0040008regulation of growth-IEAProcess
GO:0042445hormone metabolic process-IEAProcess
GO:0043565sequence-specific DNA binding21873635.IBAFunction
GO:0045944positive regulation of transcription by RNA polymerase II-IEAProcess
GO:0050684regulation of mRNA processing21873635.IBAProcess
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