EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1944273989SilentNAQ443Q0.28
BLCAchr1944266198Nonsense_MutationnovelE6*0.19
BLCAchr1944273234Missense_MutationnovelQ192K0.13
BLCAchr19442747183'UTRnovel0.15
BLCAchr1944274257Missense_MutationNAE533Q0.13
BLCAchr1944267023Intronnovel0.11
BLCAchr1944273245SilentnovelQ195Q0.13
BLCAchr1944273816Missense_MutationnovelD386N0.19
BLCAchr1944273268Missense_MutationNAV203A0.39
BRCAchr1944266289Missense_MutationnovelV36A0.06
BRCAchr1944266285Missense_MutationNAD35N0.26
BRCAchr1944266910Missense_MutationnovelE63Q0.06
BRCAchr1944274505Silentrs751008846T615T0.22
BRCAchr1944274021Missense_MutationnovelC454Y0.1
BRCAchr1944273688Missense_MutationnovelR343K0.04
CESCchr1944274089Missense_MutationNAE477Q0.18
CESCchr19442599895'UTRnovel0.79
CESCchr1944273273Missense_MutationnovelN205H0.2
CESCchr1944273636Missense_MutationNAG326S0.28
CESCchr1944273441Missense_MutationNAD261H0.52
CESCchr1944273949Missense_MutationnovelV430A0.45
COADchr1944273240Missense_MutationnovelY194H0.39
COADchr1944273787Missense_MutationnovelG376E0.25
COADchr1944273167Frame_Shift_DelNAN171Ifs*60.29
COADchr1944274427SilentNAE589E0.16
COADchr1944266922Missense_Mutationrs372189870R67W0.24
COADchr1944273043Missense_MutationnovelG128D0.33
COADchr1944272918SilentNAE86E0.3
COADchr1944273599Nonsense_MutationNAC313*0.3
COADchr1944267060Intronnovel0.27
DLBCchr1944273706Missense_Mutationrs569951523R349Q0.3
ESCAchr1944273086SilentnovelQ142Q0.42
ESCAchr19442599945'UTRnovel0.32
GBMchr1944274311Missense_MutationnovelL551F0.38
GBMchr1944274471Missense_MutationnovelN604T0.47
GBMchr1944273913Missense_MutationNAR418K0.13
GBMchr19442643325'UTRnovel0.16
GBMchr1944274586Missense_MutationnovelH642Q0.06
HNSCchr1944274023Missense_MutationnovelE455K0.16
HNSCchr1944274505SilentnovelT615T0.39
HNSCchr1944273706Missense_Mutationrs569951523R349Q0.32
HNSCchr1944273707SilentNAR349R0.33
HNSCchr1944273358Missense_MutationnovelA233D0.26
HNSCchr1944272979Nonsense_MutationnovelQ107*0.14
HNSCchr1944274597Missense_MutationnovelK646T0.42
HNSCchr19442643255'UTRnovel0.32
HNSCchr1944274365Missense_MutationnovelC569R0.06
HNSCchr1944273602Silentrs768613329Y314Y0.47
HNSCchr1944273047SilentnovelK129K0.12
KIRCchr1944266989Intronnovel0.24
KIRCchr1944273137Missense_MutationNAI159M0.33
KIRCchr1944273952Frame_Shift_InsnovelD432Sfs*20.06
LAMLchr1944273263Missense_MutationnovelI201M0.24
LAMLchr1944273435Missense_MutationnovelT259S0.14
LUADchr1944272899Missense_MutationNAG80E0.23
LUADchr1944266991Intronrs7505235580.26
LUADchr1944273589Missense_MutationnovelG310E0.24
LUADchr1944274476Missense_MutationnovelY606N0.32
LUADchr19442747183'UTRnovel0.18
LUADchr1944273439Missense_MutationnovelS260F0.22
LUADchr1944274235SilentnovelA525A0.11
LUADchr1944274413Missense_MutationnovelV585I0.23
LUADchr19442747183'UTRnovel0.3
LUADchr1944273841Missense_MutationNAG394A0.16
LUADchr1944267052Intronnovel0.47
LUADchr1944274575Missense_MutationnovelQ639K0.26
LUADchr1944274411Missense_MutationNAR584K0.2
LUADchr1944273888Missense_MutationNAT410P0.13
LUSCchr1944272916Missense_MutationnovelE86K0.22
LUSCchr1944273318Missense_MutationnovelH220N0.27
LUSCchr1944273394Missense_Mutationrs752172996K245T0.27
LUSCchr1944273728Nonsense_MutationNAC356*0.13
LUSCchr1944273087Missense_MutationnovelV143M0.42
OVchr1944274530Missense_MutationNAM624L0.1
OVchr1944274225Missense_MutationnovelH522P0.09
PAADchr1944274040SilentnovelG460G0.19
PRADchr1944273847Missense_MutationNAR396T0.63
PRADchr1944273773Silentrs761278530T371T0.51
READchr1944274306Missense_Mutationrs200116301S549L0.33
READchr1944274474Missense_MutationnovelS605L0.36
READchr1944274603Missense_MutationNAY648C0.11
SARCchr1944273672Missense_MutationnovelG338R0.2
SARCchr1944274073Silentrs765181652Q471Q0.21
SKCMchr1944273427Missense_MutationNAG256E0.24
SKCMchr1944273212SilentnovelR184R0.26
SKCMchr1944273535Missense_MutationnovelG292E0.52
SKCMchr1944274593Missense_MutationNAE645K0.36
SKCMchr1944273049Missense_MutationNAR130K0.19
SKCMchr1944273683SilentNAL341L0.32
SKCMchr1944273173Missense_MutationNAN171K0.37
SKCMchr1944273048SilentNAR130R0.33
SKCMchr1944273707SilentNAR349R0.19
SKCMchr1944274295Missense_MutationNAF545L0.24
SKCMchr1944266942SilentnovelI73I0.08
SKCMchr1944273540Missense_MutationnovelG294S0.54
SKCMchr1944274653Missense_MutationNAD665N0.55
SKCMchr1944266305SilentNAF41F0.4
SKCMchr1944266282Nonsense_MutationNAQ34*0.32
STADchr1944273678Missense_MutationnovelN340H0.17
STADchr1944273610Missense_MutationnovelG317D0.3
STADchr1944274307Silentrs146745646S549S0.27
STADchr1944274333Missense_MutationNAH558R0.39
STADchr1944273774Missense_MutationnovelC372R0.35
STADchr1944273508Missense_MutationNAD283A0.06
STADchr1944274300Missense_MutationNAQ547R0.05
STADchr1944273076Frame_Shift_DelnovelC141Vfs*180.22
STADchr1944274603Missense_MutationNAY648C0.17
STADchr1944274638Missense_MutationnovelS660R0.44
TGCTchr1944274364SilentnovelV568V0.2
THCAchr1944267023Intronnovel0.11
THYMchr19442643355'UTRnovel0.09
UCECchr1944273128Missense_MutationNAN156K0.31
UCECchr1944274343Missense_MutationNAE561D0.32
UCECchr19442746923'UTRnovel0.37
UCECchr1944273544Missense_Mutationrs150005688I295T0.24
UCECchr1944273813Missense_MutationnovelF385V0.09
UCECchr19442747643'UTRnovel0.2
UCECchr1944274243Missense_MutationnovelR528I0.23
UCECchr1944274075Missense_MutationNAR472I0.28
UCECchr1944274479Missense_MutationnovelL607I0.12
UCECchr1944274469Missense_MutationNAW603C0.29
UCECchr1944273599SilentNAC313C0.09
UCECchr1944274549Missense_MutationNAS630I0.22
UCECchr1944266252Frame_Shift_InsnovelL24Sfs*630.02
UCECchr19442599505'UTRrs5272797150.43
UCECchr1944267063Intronrs7771526770.17
UCECchr1944266285Missense_MutationnovelD35Y0.32
UCECchr1944264375Missense_MutationNAQ5H0.32
UCECchr1944274306Missense_Mutationrs200116301S549L0.43
UCECchr1944273647SilentnovelL329L0.25
UCECchr1944274668Missense_MutationnovelP670T0.56
UCECchr1944272995Missense_MutationNAF112C0.4
UCECchr1944272915SilentnovelN85N0.39
UCECchr1944272991Missense_MutationNAQ111K0.37
UCECchr1944273128Missense_MutationNAN156K0.36
UCECchr1944272979Nonsense_MutationnovelQ107*0.57
UCECchr1944273346Nonsense_MutationnovelK229delinsNFSPG*V0.09
UCECchr1944273348Nonsense_MutationnovelR230delinsSS*0.07
UCECchr1944274642Missense_MutationnovelS661L0.29
UCECchr1944273827SilentnovelC389C0.29
UCECchr1944273036Missense_Mutationrs772891548L126I0.36
UCECchr1944273033Missense_MutationnovelN125H0.43
UCECchr1944273281SilentnovelL207L0.51
UCECchr1944273130Missense_MutationnovelY157C0.18
UCECchr1944274628SilentNAG656G0.07
UCECchr1944273294Missense_MutationNAH212N0.47
UCECchr1944267071Intronnovel0.06
UCECchr1944267073Intronnovel0.03
UCECchr1944273533Silentrs183103711Y291Y0.41
UCECchr1944274080Missense_MutationnovelH474N0.2
UCECchr1944273437SilentNAT259T0.37
UCSchr1944273113SilentnovelV151V0.41

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
KIRPDEL0.04170.054726
READDEL0.07270.23023
TGCTDEL0.28670.0046229
UCSDEL0.19640.12448

Survival Analysis
CancerP-value Q-value
STAD0.048

Kaplan-Meier Survival Analysis

HNSC0.042

Kaplan-Meier Survival Analysis

PAAD0.008

Kaplan-Meier Survival Analysis

LAML0.0076

Kaplan-Meier Survival Analysis

LIHC0.00082

Kaplan-Meier Survival Analysis

CHOL0.013

Kaplan-Meier Survival Analysis

UVM0.0022

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000159915 (Gene tree)
Gene ID
353355
Gene Symbol
ZNF233
Alias
FLJ38032
Full Name
zinc finger protein 233
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
15,438 bases
Position
chr19:44,259,880-44,275,317
Accession
30946
RBP type
canonical RBP
Summary
ZNF233 (Zinc Finger Protein 233) is a Protein Coding gene. Among its related pathways are Gene Expression and Herpes simplex virus 1 infection. Gene Ontology (GO) annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF285.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000375820zf-C2H2PF00096.266.9e-3816
ENSP00000375820zf-C2H2PF00096.266.9e-3826
ENSP00000375820zf-C2H2PF00096.266.9e-3836
ENSP00000375820zf-C2H2PF00096.266.9e-3846
ENSP00000375820zf-C2H2PF00096.266.9e-3856
ENSP00000375820zf-C2H2PF00096.266.9e-3866
ENSP00000375820zf-metPF12874.72.2e-0512
ENSP00000375820zf-metPF12874.72.2e-0522
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000588489ZNF233-202528XM_017026761ENSP00000465136116 (aa)XP_016882250K7EJE5
ENST00000590668ZNF233-204574-ENSP00000466781162 (aa)-K7EN46
ENST00000391958ZNF233-2012784XM_024451489ENSP00000375820670 (aa)XP_024307257A6NK53
ENST00000589522ZNF233-2031120-ENSP0000046530783 (aa)-K7EJT0
ENST00000592581ZNF233-2052938XM_017026758ENSP00000468154140 (aa)XP_016882247K7ER86
Gene Model
Click here to download ENSG00000159915's gene model file
Pathways
Pathway IDPathway NameSource
hsa05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000159915's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000159915ZNF2339579.747ENSAMEG00000006122ZNF2339871.233Ailuropoda_melanoleuca
ENSG00000159915ZNF2339992.801ENSCATG00000015076ZNF2339892.801Cercocebus_atys
ENSG00000159915ZNF2339894.198ENSCSAG00000003326ZNF2339994.163Chlorocebus_sabaeus
ENSG00000159915ZNF2339964.114ENSCHOG00000010443ZNF2339864.231Choloepus_hoffmanni
ENSG00000159915ZNF23310093.284ENSCANG00000032081ZNF2339893.607Colobus_angolensis_palliatus
ENSG00000159915ZNF2339850.968ENSCGRG00000015809-9951.140Cricetulus_griseus_crigri
ENSG00000159915ZNF2339142.122ENSCGRG00000015629-9542.071Cricetulus_griseus_crigri
ENSG00000159915ZNF2339975.228ENSDNOG00000038729ZNF2339975.229Dasypus_novemcinctus
ENSG00000159915ZNF2336151.190ENSFALG00000009044-10051.190Ficedula_albicollis
ENSG00000159915ZNF2338997.306ENSGGOG00000013940ZNF2339897.306Gorilla_gorilla
ENSG00000159915ZNF23310090.179ENSMFAG00000039215ZNF2339990.895Macaca_fascicularis
ENSG00000159915ZNF23310090.179ENSMMUG00000012797ZNF2339990.895Macaca_mulatta
ENSG00000159915ZNF2336851.515ENSMZEG00005024630-9651.515Maylandia_zebra
ENSG00000159915ZNF2339981.089ENSMICG00000016725ZNF2339880.974Microcebus_murinus
ENSG00000159915ZNF2338952.247MGP_CAROLIEiJ_G0029327Zfp939952.247Mus_caroli
ENSG00000159915ZNF2339945.359MGP_CAROLIEiJ_G0029326Zfp1089947.283Mus_caroli
ENSG00000159915ZNF2339946.619MGP_CAROLIEiJ_G0029322Zfp23510050.351Mus_caroli
ENSG00000159915ZNF2339946.619ENSMUSG00000047603Zfp23510050.351Mus_musculus
ENSG00000159915ZNF2339949.361ENSMUSG00000030486Zfp10810050.784Mus_musculus
ENSG00000159915ZNF2336082.000ENSMUSG00000068962Zfp1149945.000Mus_musculus
ENSG00000159915ZNF2339952.247ENSMUSG00000055305Zfp939952.247Mus_musculus
ENSG00000159915ZNF2339945.492MGP_PahariEiJ_G0021173Zfp23510051.084Mus_pahari
ENSG00000159915ZNF2339947.826MGP_PahariEiJ_G0021177Zfp1089947.826Mus_pahari
ENSG00000159915ZNF2338745.777MGP_PahariEiJ_G0021178Zfp939554.124Mus_pahari
ENSG00000159915ZNF2336953.041MGP_SPRETEiJ_G0030421-9953.202Mus_spretus
ENSG00000159915ZNF2339949.616MGP_SPRETEiJ_G0030420Zfp10810048.098Mus_spretus
ENSG00000159915ZNF2339946.619MGP_SPRETEiJ_G0030416Zfp23510050.351Mus_spretus
ENSG00000159915ZNF2339646.784MGP_SPRETEiJ_G0030417Zfp1149946.175Mus_spretus
ENSG00000159915ZNF2336954.144ENSORLG00015017539-8356.842Oryzias_latipes_hsok
ENSG00000159915ZNF2339086.667ENSOGAG00000001912ZNF23310075.535Otolemur_garnettii
ENSG00000159915ZNF23310097.531ENSPPAG00000030145ZNF23310097.015Pan_paniscus
ENSG00000159915ZNF23310098.765ENSPTRG00000011111ZNF23310097.463Pan_troglodytes
ENSG00000159915ZNF2339893.303ENSPANG00000010670ZNF2339893.303Papio_anubis
ENSG00000159915ZNF2339955.970ENSPEMG00000018022-10056.030Peromyscus_maniculatus_bairdii
ENSG00000159915ZNF23310094.444ENSPPYG00000010085ZNF2339395.282Pongo_abelii
ENSG00000159915ZNF2339779.784ENSPCOG00000015292ZNF2339879.908Propithecus_coquereli
ENSG00000159915ZNF2339565.823ENSPVAG00000004388ZNF2339853.139Pteropus_vampyrus
ENSG00000159915ZNF2339994.251ENSRBIG00000035218ZNF2339994.216Rhinopithecus_bieti
ENSG00000159915ZNF2339894.064ENSRROG00000030619ZNF2339894.064Rhinopithecus_roxellana
ENSG00000159915ZNF23310074.074ENSTTRG00000011818ZNF2339873.556Tursiops_truncatus
ENSG00000159915ZNF2338969.983ENSUMAG00000023065ZNF2339869.779Ursus_maritimus
ENSG00000159915ZNF2339573.418ENSVPAG00000007465ZNF23310067.643Vicugna_pacos
ENSG00000159915ZNF2336551.955ENSXMAG00000027300-5752.841Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific-ISAFunction
GO:0003677DNA binding-IEAFunction
GO:0003700DNA-binding transcription factor activity21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0006357regulation of transcription by RNA polymerase II-IEAProcess
GO:0046872metal ion binding-IEAFunction
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