EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
28220627Downregulation of miRNA-141 in breast cancer cells is associated with cell migration and invasion: involvement of ANP32E targeting.Cancer Med2017 MarLi Pdoi: 10.1002/cam4.1024

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr11502206693'UTRrs7823146540.13
BLCAchr1150231878Missense_MutationnovelE35Q0.14
BLCAchr1150226633Missense_MutationNAS219L0.46
BLCAchr1150220728Missense_MutationNAR257Q0.1
BLCAchr1150220747Nonsense_MutationNAR251*0.67
BRCAchr1150230625SilentNAT91T0.4
BRCAchr1150231805Missense_MutationNAR59Q0.14
BRCAchr1150229073Splice_Regionrs151007873E164E0.13
BRCAchr11502358605'UTRnovel0.29
BRCAchr1150231781Missense_Mutationrs782603651R67Q0.22
CESCchr1150230668Missense_MutationNAS77F0.27
CESCchr1150235749In_Frame_InsnovelN13delinsRERERGRD0.17
CESCchr11502185633'UTRnovel0.34
COADchr11502358605'UTRnovel0.41
COADchr11502205263'UTRnovel0.16
COADchr1150220752Missense_Mutationrs143260001G249D0.11
COADchr1150229148SilentnovelL139L0.31
COADchr11502358615'UTRnovel0.23
COADchr1150231781Missense_Mutationrs782603651R67Q0.32
COADchr1150226619Nonsense_MutationNAE224*0.07
ESCAchr11502201873'UTRnovel0.12
ESCAchr11502201383'UTRnovel0.35
ESCAchr11502203723'UTRnovel0.24
GBMchr1150230599Missense_MutationNAI100T0.44
GBMchr11502206293'UTRnovel0.83
HNSCchr1150229125Missense_MutationnovelG147E0.24
HNSCchr1150230623Missense_MutationnovelY92S0.1
HNSCchr1150226687Missense_MutationnovelD201G0.32
HNSCchr11502206163'UTRnovel0.35
HNSCchr1150230587Missense_MutationnovelS104T0.1
KIRCchr11502205353'UTRnovel0.47
KIRPchr1150229224Missense_MutationNAN114T0.42
LIHCchr11502206033'UTRnovel0.66
LIHCchr1150231814Missense_MutationNAS56L0.09
LUADchr1150229096Missense_MutationNAD157Y0.35
LUADchr1150226746SilentNAP181P0.27
LUADchr11502357925'UTRrs7827512760.5
LUSCchr1150231919Missense_MutationnovelE21V0.29
LUSCchr1150220746Missense_MutationnovelR251L0.17
LUSCchr1150226724Missense_MutationnovelE189Q0.22
LUSCchr1150220723Missense_MutationnovelA259S0.17
LUSCchr1150226666Frame_Shift_InsnovelE208Gfs*160.05
LUSCchr1150226668SilentnovelS207S0.03
LUSCchr1150231854Missense_MutationnovelE43Q0.23
LUSCchr11502206423'UTRnovel0.26
OVchr11502205993'UTRnovel0.12
OVchr11502206193'UTRnovel0.1
READchr1150231781Missense_Mutationrs782603651R67Q0.26
SARCchr11502186073'UTRnovel0.2
SKCMchr11502206063'UTRnovel0.38
SKCMchr1150226608Splice_RegionnovelQ227Q0.65
STADchr1150226792Missense_MutationNAG166D0.15
STADchr1150231854Nonsense_MutationNAE43*0.27
STADchr1150230694Splice_SitenovelX69_splice0.5
STADchr1150229082Missense_MutationNAE161D0.1
STADchr1150229188Missense_MutationNAT126I0.42
UCECchr1150231828SilentNAN51N0.38
UCECchr11502205323'UTRnovel0.45
UCECchr1150231857Nonsense_MutationNAK42*0.32
UCECchr11502185353'UTRnovel0.43
UCECchr1150230602Missense_MutationnovelK99T0.28
UCECchr1150235775Missense_MutationnovelK4N0.32
UCECchr1150226616Nonsense_MutationNAE225*0.46
UCECchr1150231781Missense_Mutationrs782603651R67Q0.15
UCECchr11502185823'UTRnovel0.4
UCECchr1150223196Missense_MutationnovelE242D0.43
UCECchr11502185903'UTRnovel0.32
UCECchr1150231781Missense_Mutationrs782603651R67Q0.06
UCECchr1150235752Missense_MutationNAR12K0.25
UCECchr11502358685'UTRnovel0.11
UCECchr1150231842Missense_MutationnovelL47M0.3
UCECchr11502201163'UTRnovel0.31
UCECchr1150229216Missense_MutationnovelS117R0.57
UCECchr11502186303'UTRnovel0.21
UCECchr11502206103'UTRnovel0.34
UCECchr11502205163'UTRnovel0.44
UCECchr11502185443'UTRnovel0.23
UCECchr11502202683'UTRnovel0.46
UCECchr11502201523'UTRnovel0.25
UCECchr1150229149Missense_MutationnovelL139P0.21
UCECchr11502185443'UTRnovel0.22
UCECchr11502203823'UTRnovel0.31
UCECchr1150220706Missense_MutationnovelE264D0.43
UCECchr11502358505'UTRnovel0.48
UCECchr1150235776Missense_Mutationrs782000338K4M0.31
UCECchr11502205023'UTRnovel0.29
UCECchr1150230582Missense_MutationnovelV106L0.39
UCECchr1150223217Nonsense_MutationnovelY235*0.68
UCECchr11502184283'UTRnovel0.4
UCECchr1150220728Missense_MutationNAR257Q0.19
UCECchr1150220753Missense_MutationnovelG249C0.21
UCSchr1150220762Splice_SitenovelX246_splice0.31

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCAMP0.15560.11282
CESCAMP0.47463.2002e-05
DLBCDEL0.02080.0017831
ESCAAMP0.39670.0022446
KIRCAMP0.09280.059566
LUSCAMP0.42711.6618e-06
PAADAMP0.21740.085665
PCPGAMP0.15430.00029562
READAMP0.26060.025154
SARCAMP0.33074.3422e-08
SKCMAMP0.47419.6912e-06
STADAMP0.2541.12e-06
TGCTAMP0.35330.088103

Survival Analysis
CancerP-value Q-value
THYM0.011

Kaplan-Meier Survival Analysis

STAD0.047

Kaplan-Meier Survival Analysis

SARC0.00043

Kaplan-Meier Survival Analysis

ACC0.00012

Kaplan-Meier Survival Analysis

SKCM0.023

Kaplan-Meier Survival Analysis

LUSC0.015

Kaplan-Meier Survival Analysis

KIRP0.00029

Kaplan-Meier Survival Analysis

PAAD0.0076

Kaplan-Meier Survival Analysis

LAML0.016

Kaplan-Meier Survival Analysis

GBM0.039

Kaplan-Meier Survival Analysis

LIHC0.00013

Kaplan-Meier Survival Analysis

LGG0.00088

Kaplan-Meier Survival Analysis

LUAD0.0026

Kaplan-Meier Survival Analysis

UVM0.022

Kaplan-Meier Survival Analysis

OV0.048

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000143401 (Gene tree)
Gene ID
81611
Gene Symbol
ANP32E
Alias
LANPL|MGC5350|LANP-L
Full Name
acidic nuclear phosphoprotein 32 family member E
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
17,740 bases
Position
chr1:150,218,417-150,236,156
Accession
16673
RBP type
non-canonical RBP
Summary
(Acidic Nuclear Phosphoprotein 32 Family Member E) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include histone binding and phosphatase inhibitor activity. An important paralog of this gene is ANP32A.
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000533654ANP32E-205908-ENSP00000435215165 (aa)-E9PLC4
ENST00000629042ANP32E-2103054-ENSP00000487027136 (aa)-Q5TB25
ENST00000534220ANP32E-206512-ENSP00000436529105 (aa)-E9PI45
ENST00000534437ANP32E-207616-ENSP00000431434100 (aa)-H0YCE2
ENST00000616917ANP32E-2092989-ENSP00000481415220 (aa)-Q9BTT0
ENST00000369115ANP32E-202708-ENSP00000358111136 (aa)-Q5TB25
ENST00000369114ANP32E-2011048-ENSP00000358110149 (aa)-Q5TB19
ENST00000532744ANP32E-204621-ENSP00000432684114 (aa)-E9PPH5
ENST00000583931ANP32E-2083451XM_005245513ENSP00000463154268 (aa)XP_005245570Q9BTT0
ENST00000436748ANP32E-2031339-ENSP00000393718227 (aa)-Q9BTT0
Gene Model
Click here to download ENSG00000143401's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000143401Circadian Rhythm5E-626835600
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000143401rs108885761150228460?Morning vs. evening chronotype26835600EFO_0004354
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000143401's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000143401ANP32E9750.932ENSG00000140350ANP32A8671.053Homo_sapiens
ENSG00000143401ANP32E9647.799ENSG00000136938ANP32B6166.447Homo_sapiens
ENSG00000143401ANP32E8498.958ENSMUSG00000015749Anp32e100100.000Mus_musculus
ENSG00000143401ANP32E9746.875ENSMUSG00000028333Anp32b5661.842Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000812Swr1 complex24463511.IDAComponent
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-IDAComponent
GO:0005634nucleus-ISSComponent
GO:0019212phosphatase inhibitor activity21873635.IBAFunction
GO:0019212phosphatase inhibitor activity-ISSFunction
GO:0031410cytoplasmic vesicle-ISSComponent
GO:0042393histone binding21873635.IBAFunction
GO:0042393histone binding24463511.IDAFunction
GO:0043086negative regulation of catalytic activity-IEAProcess
GO:0043486histone exchange21873635.IBAProcess
GO:0043486histone exchange24463511.IDAProcess
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