EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
28473981Screening of Tumor Suppressor Genes in Metastatic Colorectal Cancer.Biomed Res Int2017Qi Ldoi: 10.1155/2017/2769140
12646234Methyl-CpG-DNA binding proteins in human prostate cancer: expression of CXXC sequence containing MBD1 and repression of MBD2 and MeCP2.Biochem Biophys Res Commun2003 Mar 21Patra SK-
23331011Up-regulation of MBD1 promotes pancreatic cancer cell epithelial-mesenchymal transition and invasion by epigenetic down-regulation of E-cadherin.Curr Mol Med2013 MarXu J-
18668384Methyl-CpG binding domain 1 gene polymorphisms and lung cancer risk in a Chinese population.Biomarkers2008 SepLiu Hdoi: 10.1080/13547500802168031 .
18445260Proteomic analysis of differential proteins in pancreatic carcinomas: Effects of MBD1 knock-down by stable RNA interference.BMC Cancer2008 Apr 29Liu Cdoi: 10.1186/1471-2407-8-121.
18666890Silencing of MBD1 and MeCP2 in prostate-cancer-derived PC3 cells produces differential gene expression profiles and cellular phenotypes.Biosci Rep2008 DecYaqinuddin Adoi: 10.1042/BSR20080032.
23588667Silencing of MBD1 reverses pancreatic cancer therapy resistance through inhibition of DNA damage repair.Int J Oncol2013 JunXu Jdoi: 10.3892/ijo.2013.1901
30487699Zinc finger E-box-binding homeobox 1 mediates aerobic glycolysis via suppression of sirtuin 3 in pancreatic cancer.World J Gastroenterol2018 Nov 21Xu WYdoi: 10.3748/wjg.v24.i43.4893.

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr18502697303'UTRnovel0.36
BLCAchr1850274258In_Frame_DelnovelF355_D358del0.14
BLCAchr1850277115Missense_MutationnovelG67D0.73MBD
BLCAchr1850275650Frame_Shift_DelnovelR248Afs*740.4
BLCAchr1850275669Frame_Shift_DelnovelI242Sfs*800.14
BLCAchr1850272907Missense_MutationNAE545Q0.19
BLCAchr1850274203Missense_MutationNAC377R0.23
BLCAchr1850271467Splice_Sitenovel0.28
BLCAchr1850274302Missense_MutationnovelC344S0.49
BLCAchr1850272952Missense_MutationnovelV530I0.43
BLCAchr1850273471Nonsense_MutationnovelE483*0.33
BLCAchr1850274239In_Frame_DelnovelK359_G364del0.24
BLCAchr1850270019Intronnovel0.35
BLCAchr1850276998Missense_MutationnovelA76T0.6
BRCAchr1850272948Frame_Shift_DelNAD531Afs*70.22
BRCAchr1850270073IntronNA0.3
BRCAchr1850275858Missense_MutationNAR214C0.32
BRCAchr1850274261Silentrs115570375C357C0.26
BRCAchr18502695003'UTRnovel0.33
BRCAchr1850274246SilentNAF362F0.21
BRCAchr1850276682Missense_Mutationrs545375854T152M0.33
BRCAchr1850274245Missense_MutationNAG363R0.26
CESCchr1850277129Silentrs772372557F62F0.44
CESCchr1850275423Intronnovel0.48
CESCchr1850275669Frame_Shift_DelnovelI242Sfs*800.52
CESCchr1850273783Frame_Shift_InsnovelS410Gfs*470.05
CESCchr1850273784Frame_Shift_InsnovelP409Hfs*190.02
CESCchr1850275882Missense_MutationnovelL206M0.13
CESCchr18502695043'UTRnovel0.41
CESCchr1850273728Missense_Mutationrs775229161R428C0.51
CESCchr1850275952SilentnovelC182C0.37
CESCchr1850276927Missense_MutationnovelQ99H0.39
CESCchr1850279938Missense_MutationnovelE19K0.38MBD
COADchr1850275707Missense_Mutationrs771787035R229W0.73
COADchr1850273410Missense_MutationNAA503V0.33
COADchr1850275635Missense_MutationNAR253C0.08
COADchr1850274295Missense_MutationNAR346Q0.49
COADchr1850273437Missense_MutationnovelA494V0.1
COADchr1850276713Frame_Shift_DelNAD143Wfs*290.25
COADchr1850274312SilentNAA340A0.64
COADchr1850274209Missense_MutationNAR375C0.27
COADchr1850276398Missense_MutationNAR166W0.26
COADchr1850276397Missense_MutationnovelR166Q0.07
COADchr1850275650Missense_MutationNAR248C0.6
COADchr1850274326Missense_MutationNAR336C0.14
COADchr1850271378Intronnovel0.32
COADchr18502696023'UTRnovel0.08
COADchr1850273707Missense_MutationNAT435A0.36
COADchr1850277128Missense_MutationNAD63N0.05MBD
COADchr1850275027Missense_MutationNAP310S0.24
COADchr18502696763'UTRnovel0.31
DLBCchr1850272727Silentrs759306269I576I0.25
ESCAchr18502695733'UTRnovel0.09
GBMchr1850277090Splice_RegionNAK75K0.31
GBMchr1850273750SilentnovelT420T0.62
GBMchr1850275683Missense_MutationnovelC237G0.37
GBMchr1850276996Splice_RegionnovelA76A0.46
GBMchr18502695733'UTRnovel0.09
GBMchr18502697643'UTRNA0.09
GBMchr18502695733'UTRnovel0.2
GBMchr1850274190Missense_MutationnovelA381V0.39
GBMchr1850274335Missense_MutationnovelR333W0.18
GBMchr1850276388Missense_MutationnovelR169I0.26
GBMchr1850271337Intronnovel0.09
GBMchr18502696893'UTRnovel0.12
HNSCchr1850279882Splice_Siters765681778X37_splice0.25
HNSCchr1850273843Frame_Shift_InsnovelW390Sfs*330.39
HNSCchr1850277108Missense_MutationnovelL69F0.19
HNSCchr1850273601Missense_Mutationrs199727558P470L0.46
KIRCchr1850272857SilentNAP561P0.24
KIRCchr1850273612SilentnovelP466P0.34
KIRCchr1850277174SilentNAV47V0.24
KIRPchr1850275634Missense_Mutationrs759614155R253H0.34
LAMLchr1850273402Nonsense_MutationnovelQ506*0.1
LAMLchr18502696403'UTRnovel0.4
LGGchr1850274227Missense_MutationNAR369C0.11
LIHCchr1850275398Intronrs3720093960.68
LIHCchr1850274258In_Frame_DelnovelF355_D358del0.25
LIHCchr1850269945Intronnovel0.62
LIHCchr1850273686Nonsense_MutationNAE442*0.32
LIHCchr1850276998Missense_MutationNAA76S0.21
LUADchr1850272843Missense_MutationnovelG566E0.07
LUADchr1850269991Intronnovel0.11
LUADchr1850273649Missense_MutationNAT454S0.33
LUADchr1850280018Splice_Sitenovel0.27
LUADchr1850273865Splice_SiteNAX383_splice0.53
LUADchr1850273396Nonsense_MutationNAE508*0.29
LUADchr1850273616In_Frame_InsnovelS465delinsTR0.07
LUADchr1850270036Intronnovel0.31
LUADchr18502696983'UTRnovel0.17
LUADchr1850276910Frame_Shift_DelnovelS104*0.06
LUADchr1850274242Missense_MutationNAG364C0.47
LUADchr1850276967Frame_Shift_DelnovelR86Qfs*990.38
LUADchr1850275974Frame_Shift_DelnovelG175Afs*100.13
LUADchr1850275926Missense_MutationNAC191F0.5
LUADchr1850275597Splice_Regionnovel0.27
LUADchr1850275676Missense_MutationnovelH239L0.09
LUADchr1850275205Missense_MutationNAM278T0.28
LUADchr1850277154Missense_MutationnovelG54D0.27MBD
LUSCchr1850275129Splice_Regionrs759943579P303P0.23
LUSCchr1850273561Splice_Regionnovel0.17
LUSCchr1850275724Missense_Mutationrs759684535R223Q0.25
LUSCchr1850275130Missense_Mutationrs115426299P303L0.21
LUSCchr1850274994Missense_MutationNAV321I0.15
LUSCchr1850272926SilentNAK538K0.39
LUSCchr1850273358SilentnovelV520V0.22
LUSCchr18502697813'UTRnovel0.3
LUSCchr1850273772Missense_MutationnovelR413L0.38
LUSCchr1850274982Missense_MutationnovelE325K0.45
LUSCchr1850276856Missense_MutationnovelA123V0.41
LUSCchr1850274226Missense_MutationnovelR369P0.28
LUSCchr1850279946Missense_MutationnovelK16M0.13MBD
LUSCchr1850279951SilentnovelG14G0.35
LUSCchr1850273398Missense_MutationnovelD507V0.35
OVchr1850270019Intronnovel0.07
OVchr1850276915SilentNAQ103Q0.24
OVchr18502697383'UTRnovel0.07
OVchr1850275915Missense_MutationnovelL195F0.13
OVchr1850270079Intronnovel0.05
OVchr1850273441Missense_Mutationrs774182305V493M0.78
OVchr1850272838Frame_Shift_InsnovelA568Sfs*340.05
OVchr1850273799Missense_Mutationrs769115388R404H0.21
PAADchr1850271537Splice_SitenovelX593_splice0.39
PAADchr1850279940Missense_Mutationrs755717520R18H0.15MBD
PRADchr1850275025SilentnovelP310P0.16
PRADchr1850273410Missense_MutationNAA503V0.17
PRADchr1850279891Frame_Shift_DelnovelY34Lfs*140.44MBD
PRADchr1850272909Frame_Shift_DelnovelP544Qfs*290.09
PRADchr1850279889Frame_Shift_InsnovelY35Lfs*140.5MBD
READchr1850269945Intronnovel0.3
READchr18502694283'UTRnovel0.21
READchr1850275614Nonsense_MutationNAR260*0.27
READchr18502696193'UTRnovel0.39
SARCchr1850270043Intronnovel0.24
SARCchr1850271397Intronnovel0.18
SARCchr1850273852SilentnovelL386L0.45
SKCMchr1850269896Intronnovel0.17
SKCMchr1850277095Missense_MutationnovelP74S0.28
SKCMchr1850277096SilentNAA73A0.24
SKCMchr1850274246SilentNAF362F0.24
SKCMchr1850273698Missense_MutationnovelP438S0.43
SKCMchr1850275188Missense_MutationNAP284S0.58
SKCMchr1850277204Splice_RegionnovelS37S0.25
SKCMchr1850275187Missense_MutationNAP284L0.08
SKCMchr1850275392Intronrs7498137720.62
STADchr1850274227Missense_MutationNAR369C0.31
STADchr1850276701Nonsense_MutationnovelQ146*0.19
STADchr18502697673'UTRrs1402607820.36
STADchr1850276830Splice_SiteNAX131_splice0.22
STADchr1850276660Splice_SiteNAX159_splice0.41
STADchr1850271522Frame_Shift_DelNAK599Nfs*660.28
STADchr1850275649Missense_Mutationrs376154307R248H0.25
STADchr1850275707Missense_Mutationrs771787035R229W0.21
STADchr1850272872Silentrs765543918A556A0.44
STADchr1850273624Silentrs750544888G462G0.44
STADchr1850276683Frame_Shift_DelnovelT152Rfs*330.39
STADchr1850273742Missense_MutationNAP423L0.46
STADchr1850272874Missense_MutationnovelA556T0.41
STADchr1850273707Missense_MutationNAT435A0.24
STADchr1850269930Intronnovel0.19
STADchr1850274296Missense_MutationNAR346W0.2
THCAchr1850276842Missense_MutationNAP128S0.27
THYMchr18502674913'Flanknovel0.13
UCECchr1850279938Missense_MutationnovelE19K0.2MBD
UCECchr1850273362Missense_MutationNAP519L0.04
UCECchr18502695093'UTRnovel0.22
UCECchr1850274261Silentrs115570375C357C0.11
UCECchr1850275635Missense_MutationNAR253C0.53
UCECchr1850273379SilentnovelT513T0.43
UCECchr1850273369Missense_MutationnovelT517P0.14
UCECchr18502696373'UTRnovel0.38
UCECchr1850279938Missense_MutationnovelE19K0.11MBD
UCECchr1850275230Missense_Mutationrs573408638R270C0.35
UCECchr1850276991Missense_MutationNAP78L0.45
UCECchr1850276665Nonsense_Mutationrs758351481R158*0.29
UCECchr1850276862Missense_MutationnovelD121V0.36
UCECchr1850271333Intronnovel0.16
UCECchr1850277129Silentrs772372557F62F0.27
UCECchr18502694923'UTRnovel0.49
UCECchr1850273672SilentnovelG446G0.43
UCECchr1850274261Silentrs115570375C357C0.37
UCECchr1850276665Nonsense_Mutationrs758351481R158*0.27
UCECchr1850269937Intronnovel0.12
UCECchr1850271418Intronnovel0.04
UCECchr1850279939SilentNAR18R0.18
UCECchr1850275725Nonsense_MutationnovelR223*0.2
UCECchr1850279929Missense_Mutationrs780948760R22C0.18MBD
UCECchr1850279892Missense_MutationnovelY34C0.23MBD
UCECchr1850271296Intronnovel0.59
UCECchr1850279944Missense_MutationNAR17C0.31MBD
UCECchr1850270042Intronnovel0.34
UCECchr1850273449Missense_MutationnovelS490I0.49
UCECchr1850274982Missense_MutationnovelE325K0.53
UCECchr18502695933'UTRnovel0.3
UCECchr1850276397Missense_MutationnovelR166Q0.31
UCECchr18502697413'UTRrs7537551620.31
UCECchr1850275176Missense_MutationnovelP288S0.51
UCECchr1850275725Nonsense_MutationnovelR223*0.38
UCECchr1850272708Missense_MutationNAR583C0.29
UCECchr18502696813'UTRnovel0.72
UCECchr1850274296Missense_MutationNAR346W0.62
UCECchr1850276665Nonsense_Mutationrs758351481R158*0.62
UCECchr1850273565Missense_MutationnovelQ482R0.39
UCECchr18502697403'UTRrs7794574200.42
UCECchr1850273360Missense_Mutationrs767264726V520I0.2
UCECchr1850279940Missense_Mutationrs755717520R18H0.5MBD
UCECchr1850276376Splice_SitenovelX172_splice0.5
UCECchr1850269945Intronnovel0.38
UCECchr1850275981Missense_MutationnovelR173C0.35
UCECchr1850277137Missense_MutationnovelT60A0.31MBD
UCECchr1850279899Missense_MutationnovelD32N0.28MBD
UCECchr1850274227Missense_MutationNAR369C0.33
UCECchr1850271539Missense_MutationnovelS594P0.08
UCECchr1850273624Silentrs750544888G462G0.47
UCECchr1850275385Intronnovel0.52
UCECchr1850269896Intronnovel0.21
UCECchr1850271326Intronnovel0.38
UCECchr1850275706Missense_MutationNAR229L0.51
UCECchr1850270030IntronNA0.27
UCECchr1850277134Missense_MutationNAL61I0.21MBD
UCECchr1850273410Missense_MutationNAA503V0.45
UCECchr1850274246SilentNAF362F0.37
UCECchr1850279970Missense_MutationnovelC8Y0.21MBD
UCECchr1850279928Missense_MutationNAR22H0.27MBD
UCECchr1850271522Frame_Shift_DelNAK599Nfs*660.31
UCECchr18502674543'Flanknovel0.45
UCECchr1850273349SilentnovelP523P0.37
UCECchr1850275930Frame_Shift_DelnovelA190Pfs*1320.5
UCECchr18502674333'Flanknovel0.67
UCECchr1850275864Missense_Mutationrs777428957R212W0.55
UCECchr1850275936Missense_MutationNAC188S0.47
UCECchr1850279929Missense_Mutationrs780948760R22C0.44MBD
UCECchr1850274227Missense_MutationNAR369C0.45
UCECchr1850274209Missense_MutationNAR375C0.59
UCECchr1850275621Nonsense_MutationnovelC257*0.35
UCECchr1850275850SilentNAL216L0.3
UCECchr1850276388Missense_MutationNAR169K0.31
UCECchr1850279929Missense_Mutationrs780948760R22C0.34MBD
UCECchr18502715003'UTRnovel0.19
UCECchr1850272708Missense_MutationNAR583C0.45
UCECchr1850273813Silentrs200586077S399S0.39
UCECchr1850274293Missense_MutationnovelR347W0.38
UCECchr1850275130Missense_Mutationrs115426299P303L0.59
UCECchr1850275230Missense_Mutationrs573408638R270C0.27
UCECchr1850275687Missense_MutationnovelE235D0.46
UCECchr1850276682Missense_Mutationrs545375854T152M0.13
UCECchr1850273694Missense_Mutationrs748711867T439M0.34
UCECchr1850275229Missense_Mutationrs750294772R270H0.22
UCECchr1850275236Frame_Shift_InsnovelA268Cfs*80.35
UCECchr1850274227Missense_MutationNAR369C0.37
UCECchr1850275615SilentnovelQ259Q0.45
UCECchr18502694333'UTRnovel0.28
UCSchr1850270049Intronnovel0.07
UCSchr1850273605Missense_MutationnovelV469L0.51

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCADEL0.38484.5185e-08
DLBCDEL0.06250.15679
LIHCDEL0.23780.019373
LUADDEL0.39731.1082e-09
PAADDEL0.51090.050455
READDEL0.85450.20625
UCECDEL0.1410.006131
UCSDEL0.3750.0031922

Survival Analysis
CancerP-value Q-value
THYM0.0035

Kaplan-Meier Survival Analysis

MESO0.038

Kaplan-Meier Survival Analysis

ACC0.0052

Kaplan-Meier Survival Analysis

PRAD0.0012

Kaplan-Meier Survival Analysis

KIRP0.01

Kaplan-Meier Survival Analysis

PAAD0.012

Kaplan-Meier Survival Analysis

PCPG0.019

Kaplan-Meier Survival Analysis

UCEC0.0059

Kaplan-Meier Survival Analysis

LIHC0.0023

Kaplan-Meier Survival Analysis

CHOL0.043

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000141644 (Gene tree)
Gene ID
4152
Gene Symbol
MBD1
Alias
PCM1|CXXC3
Full Name
methyl-CpG binding domain protein 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
15,152 bases
Position
chr18:50,266,623-50,281,774
Accession
6916
RBP type
canonical RBP
Summary
The protein encoded by this gene is a member of a family of nuclear proteins related by the presence of a methyl-CpG binding domain (MBD). These proteins are capable of binding specifically to methylated DNA, and some members can also repress transcription from methylated gene promoters. This protein contains multiple domains: MBD at the N-terminus that functions both in binding to methylated DNA and in protein interactions; several CXXC-type zinc finger domains that mediate binding to non-methylated CpG dinucleotides; transcriptional repression domain (TRD) at the C-terminus that is involved in transcription repression and in protein interactions. Numerous alternatively spliced transcript variants encoding different isoforms have been noted for this gene.[provided by RefSeq, Feb 2011]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000468042MBDPF01429.198.6e-1611
ENSP00000381508MBDPF01429.198.7e-1611
ENSP00000381502MBDPF01429.199.4e-1611
ENSP00000465923MBDPF01429.199.8e-1611
ENSP00000405268MBDPF01429.199.9e-1611
ENSP00000468430MBDPF01429.199.9e-1611
ENSP00000339546MBDPF01429.191e-1511
ENSP00000269469MBDPF01429.191e-1511
ENSP00000466092MBDPF01429.191e-1511
ENSP00000269471MBDPF01429.191.1e-1511
ENSP00000467763MBDPF01429.191.1e-1511
ENSP00000285102MBDPF01429.191.1e-1511
ENSP00000381506MBDPF01429.191.1e-1511
ENSP00000269468MBDPF01429.191.2e-1511
ENSP00000372407MBDPF01429.191.2e-1511
ENSP00000467017MBDPF01429.191.2e-1511
ENSP00000468785MBDPF01429.191.3e-1511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
18666890Silencing of MBD1 and MeCP2 in prostate-cancer-derived PC3 cells produces differential gene expression profiles and cellular phenotypes.Biosci Rep2008 DecYaqinuddin Adoi: 10.1042/BSR20080032.
24297921H19 lncRNA controls gene expression of the Imprinted Gene Network by recruiting MBD1.Proc Natl Acad Sci U S A2013 Dec 17Monnier Pdoi: 10.1073/pnas.1310201110
16052033Specific binding of the methyl binding domain protein 2 at the BRCA1-NBR2 locus.Nucleic Acids Res2005 Jul 28Auriol E-
17274975Time-lapse and retrospective analysis of DNA methylation in mouse preimplantation embryos by live cell imaging.Dev Biol2007 Apr 1Yamazaki T-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000339998MBD1-2032956-ENSP00000339546550 (aa)-Q9UIS9
ENST00000353909MBD1-2052820-ENSP00000269469556 (aa)-Q9UIS9
ENST00000591416MBD1-2244905XM_005258271ENSP00000467017605 (aa)XP_005258328Q9UIS9
ENST00000590208MBD1-2222913XM_006722456ENSP00000468785655 (aa)XP_006722519Q9UIS9
ENST00000269468MBD1-2013259XM_017025760ENSP00000269468605 (aa)XP_016881249Q9UIS9
ENST00000589758MBD1-220385--- (aa)--
ENST00000398495MBD1-2092178XM_017025766ENSP00000381508566 (aa)XP_016881255A0A0A0MS90
ENST00000398493MBD1-2081845XM_017025768ENSP00000381506549 (aa)XP_016881257Q9UIS9
ENST00000586118MBD1-2131012--- (aa)--
ENST00000590215MBD1-223749-ENSP0000046482344 (aa)-K7EIN3
ENST00000382948MBD1-2062434-ENSP00000372407605 (aa)-Q9UIS9
ENST00000589541MBD1-218836-ENSP00000466806240 (aa)-K7EN65
ENST00000586679MBD1-214533--- (aa)--
ENST00000587605MBD1-2161945XM_011526006ENSP00000468042535 (aa)XP_011524308Q9UIS9
ENST00000592060MBD1-2271952-ENSP00000467606416 (aa)-K7EPZ6
ENST00000585672MBD1-2122532XM_017025755ENSP00000466092567 (aa)XP_016881244Q9UIS9
ENST00000589867MBD1-221673--- (aa)--
ENST00000457839MBD1-2102473XM_011525993ENSP00000405268630 (aa)XP_011524295Q9UIS9
ENST00000269471MBD1-2022980-ENSP00000269471586 (aa)-Q9UIS9
ENST00000591661MBD1-226482--- (aa)--
ENST00000589733MBD1-219767-ENSP00000466429256 (aa)-K7EMA9
ENST00000586884MBD1-215514--- (aa)--
ENST00000588937MBD1-2171761-ENSP00000467763586 (aa)-Q9UIS9
ENST00000585595MBD1-2112179-ENSP00000468430630 (aa)-Q9UIS9
ENST00000591535MBD1-2251611-ENSP00000465923536 (aa)-Q9UIS9
ENST00000347968MBD1-2043091-ENSP00000285102549 (aa)-Q9UIS9
ENST00000398488MBD1-2071512XM_017025775ENSP00000381502503 (aa)XP_016881264Q9UIS9
Gene Model
Click here to download ENSG00000141644's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000141644's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000141644MBD110087.658ENSAMEG00000000238MBD19687.025Ailuropoda_melanoleuca
ENSG00000141644MBD18068.571ENSACAG00000006091-10045.521Anolis_carolinensis
ENSG00000141644MBD110096.508ENSANAG00000036253MBD110096.508Aotus_nancymaae
ENSG00000141644MBD19992.466ENSBTAG00000003801MBD110086.529Bos_taurus
ENSG00000141644MBD110096.641ENSCJAG00000004959MBD110096.641Callithrix_jacchus
ENSG00000141644MBD19995.420ENSCAFG00000018928MBD19687.797Canis_familiaris
ENSG00000141644MBD19986.196ENSCAFG00020024272MBD19786.998Canis_lupus_dingo
ENSG00000141644MBD19992.517ENSCHIG00000021134MBD110086.529Capra_hircus
ENSG00000141644MBD110091.145ENSTSYG00000000509MBD110091.145Carlito_syrichta
ENSG00000141644MBD18297.222ENSCAPG00000015782MBD19671.376Cavia_aperea
ENSG00000141644MBD18297.222ENSCPOG00000001671MBD110073.957Cavia_porcellus
ENSG00000141644MBD19997.333ENSCCAG00000034600MBD110094.351Cebus_capucinus
ENSG00000141644MBD110099.524ENSCATG00000029959MBD110099.524Cercocebus_atys
ENSG00000141644MBD110085.397ENSCLAG00000007457MBD18985.397Chinchilla_lanigera
ENSG00000141644MBD110099.835ENSCSAG00000018070MBD110099.835Chlorocebus_sabaeus
ENSG00000141644MBD110099.524ENSCANG00000033425MBD110099.524Colobus_angolensis_palliatus
ENSG00000141644MBD110076.524ENSCGRG00001014843Mbd110074.877Cricetulus_griseus_chok1gshd
ENSG00000141644MBD18085.714ENSCGRG00000014135Mbd18479.310Cricetulus_griseus_crigri
ENSG00000141644MBD18060.000ENSDARG00000075952mbd25154.286Danio_rerio
ENSG00000141644MBD110082.250ENSDNOG00000015998MBD110083.518Dasypus_novemcinctus
ENSG00000141644MBD19977.860ENSDORG00000013917Mbd19778.659Dipodomys_ordii
ENSG00000141644MBD19992.708ENSEASG00005003857MBD110088.280Equus_asinus_asinus
ENSG00000141644MBD19991.892ENSECAG00000011497MBD18088.138Equus_caballus
ENSG00000141644MBD110088.291ENSFCAG00000015730MBD110087.816Felis_catus
ENSG00000141644MBD19981.462ENSFDAG00000011085MBD19680.182Fukomys_damarensis
ENSG00000141644MBD17554.545ENSGAFG00000008975mbd1b5034.857Gambusia_affinis
ENSG00000141644MBD17554.545ENSGACG00000012106-5833.983Gasterosteus_aculeatus
ENSG00000141644MBD18277.778ENSGAGG00000008206-5249.466Gopherus_agassizii
ENSG00000141644MBD110099.683ENSGGOG00000016966MBD110099.683Gorilla_gorilla
ENSG00000141644MBD19993.893ENSHGLG00000008740MBD110085.785Heterocephalus_glaber_female
ENSG00000141644MBD19386.943ENSHGLG00100005198MBD110087.948Heterocephalus_glaber_male
ENSG00000141644MBD17058.065ENSIPUG00000015243-5050.602Ictalurus_punctatus
ENSG00000141644MBD19987.898ENSSTOG00000007780MBD110083.902Ictidomys_tridecemlineatus
ENSG00000141644MBD19878.889ENSJJAG00000022859Mbd19678.889Jaculus_jaculus
ENSG00000141644MBD17557.576ENSKMAG00000020760mbd1b5030.348Kryptolebias_marmoratus
ENSG00000141644MBD18068.571ENSLACG00000002414-5165.079Latimeria_chalumnae
ENSG00000141644MBD19975.954ENSLAFG00000031328MBD19875.205Loxodonta_africana
ENSG00000141644MBD110099.365ENSMFAG00000026335MBD110099.365Macaca_fascicularis
ENSG00000141644MBD110099.365ENSMMUG00000009050MBD110099.365Macaca_mulatta
ENSG00000141644MBD110099.365ENSMNEG00000038822MBD110099.365Macaca_nemestrina
ENSG00000141644MBD110099.683ENSMLEG00000043121MBD110099.683Mandrillus_leucophaeus
ENSG00000141644MBD17557.576ENSMAMG00000023341-5159.155Mastacembelus_armatus
ENSG00000141644MBD18288.889ENSMAUG00000021798-9780.297Mesocricetus_auratus
ENSG00000141644MBD110090.081ENSMICG00000006414MBD110090.407Microcebus_murinus
ENSG00000141644MBD18288.889ENSMOCG00000011976-10073.498Microtus_ochrogaster
ENSG00000141644MBD17785.294ENSMODG00000001286-5844.330Monodelphis_domestica
ENSG00000141644MBD18283.333ENSMODG00000025004-10058.712Monodelphis_domestica
ENSG00000141644MBD18286.111ENSMODG00000010534-9958.304Monodelphis_domestica
ENSG00000141644MBD18288.889ENSMODG00000024864-10052.652Monodelphis_domestica
ENSG00000141644MBD19977.515ENSMUSG00000024561Mbd19768.371Mus_musculus
ENSG00000141644MBD19977.647MGP_PahariEiJ_G0019128Mbd110068.362Mus_pahari
ENSG00000141644MBD19977.515MGP_SPRETEiJ_G0023304Mbd19969.643Mus_spretus
ENSG00000141644MBD110087.184ENSMPUG00000008843MBD19686.709Mustela_putorius_furo
ENSG00000141644MBD110085.238ENSMLUG00000008286MBD19685.238Myotis_lucifugus
ENSG00000141644MBD19876.909ENSNGAG00000011412Mbd19676.909Nannospalax_galili
ENSG00000141644MBD19594.714ENSNLEG00000032711-10083.788Nomascus_leucogenys
ENSG00000141644MBD110099.091ENSNLEG00000011661-10099.091Nomascus_leucogenys
ENSG00000141644MBD19984.416ENSOPRG00000007647MBD110074.876Ochotona_princeps
ENSG00000141644MBD19982.440ENSODEG00000018451MBD19782.440Octodon_degus
ENSG00000141644MBD18286.111ENSOANG00000014593-10047.917Ornithorhynchus_anatinus
ENSG00000141644MBD19990.840ENSOCUG00000006554MBD110084.311Oryctolagus_cuniculus
ENSG00000141644MBD110087.812ENSOGAG00000003784MBD19687.812Otolemur_garnettii
ENSG00000141644MBD110086.076ENSOARG00000004218MBD19586.234Ovis_aries
ENSG00000141644MBD110099.835ENSPPAG00000038886MBD110099.835Pan_paniscus
ENSG00000141644MBD110088.468ENSPPRG00000021387MBD110087.975Panthera_pardus
ENSG00000141644MBD110088.468ENSPTIG00000021231MBD110087.975Panthera_tigris_altaica
ENSG00000141644MBD110099.841ENSPTRG00000010021MBD110099.841Pan_troglodytes
ENSG00000141644MBD110099.695ENSPANG00000010867MBD110099.695Papio_anubis
ENSG00000141644MBD18288.889ENSPEMG00000022630Mbd19766.607Peromyscus_maniculatus_bairdii
ENSG00000141644MBD18291.667ENSPCIG00000027937-8445.234Phascolarctos_cinereus
ENSG00000141644MBD17554.545ENSPFOG00000007511mbd1b5032.338Poecilia_formosa
ENSG00000141644MBD17554.545ENSPLAG00000021258mbd1b5034.286Poecilia_latipinna
ENSG00000141644MBD17554.545ENSPMEG00000024145mbd1b5032.338Poecilia_mexicana
ENSG00000141644MBD17554.545ENSPREG00000021805mbd1b5034.286Poecilia_reticulata
ENSG00000141644MBD110099.504ENSPPYG00000009158MBD19199.504Pongo_abelii
ENSG00000141644MBD19990.076ENSPCAG00000001648MBD19386.260Procavia_capensis
ENSG00000141644MBD19994.815ENSPCOG00000012450MBD110092.739Propithecus_coquereli
ENSG00000141644MBD18085.714ENSRNOG00000024104Mbd19660.927Rattus_norvegicus
ENSG00000141644MBD110099.281ENSRBIG00000041294MBD110099.281Rhinopithecus_bieti
ENSG00000141644MBD110099.365ENSRROG00000032517MBD110099.365Rhinopithecus_roxellana
ENSG00000141644MBD110095.878ENSSBOG00000027169MBD110095.878Saimiri_boliviensis_boliviensis
ENSG00000141644MBD18294.444ENSSHAG00000003661-10047.335Sarcophilus_harrisii
ENSG00000141644MBD17551.515ENSSPAG00000021447mbd1b5134.359Stegastes_partitus
ENSG00000141644MBD19992.667ENSSSCG00000004516MBD110088.619Sus_scrofa
ENSG00000141644MBD17554.545ENSTRUG00000013422mbd1b5031.026Takifugu_rubripes
ENSG00000141644MBD182100.000ENSTBEG00000012651-6884.167Tupaia_belangeri
ENSG00000141644MBD19990.506ENSTTRG00000015523MBD110084.349Tursiops_truncatus
ENSG00000141644MBD19391.901ENSUAMG00000004752MBD110083.993Ursus_americanus
ENSG00000141644MBD19992.715ENSUMAG00000002947MBD110087.150Ursus_maritimus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific-ISAFunction
GO:0003677DNA binding9774669.TASFunction
GO:0005515protein binding12665582.12711603.16432238.17066076.19498464.19666599.23275563.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus10454587.NASComponent
GO:0005654nucleoplasm-TASComponent
GO:0005694chromosome-IEAComponent
GO:0006346methylation-dependent chromatin silencing21873635.IBAProcess
GO:0006366transcription by RNA polymerase II9774669.TASProcess
GO:0008270zinc ion binding-IEAFunction
GO:0008327methyl-CpG binding21873635.IBAFunction
GO:0008327methyl-CpG binding25284789.IDAFunction
GO:0008327methyl-CpG binding10454587.NASFunction
GO:0010385double-stranded methylated DNA binding11371345.IDAFunction
GO:0016363nuclear matrix-ISSComponent
GO:0016607nuclear speck-ISSComponent
GO:0045892negative regulation of transcription, DNA-templated10454587.NASProcess
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