EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
20848417Frequent epigenetic inactivation of Myocardin in human nasopharyngeal carcinoma.Head Neck2011 JanChen Fdoi: 10.1002/hed.21396.
24607789Re-expression and epigenetic modification of maspin induced apoptosis in MCF-7 cells mediated by myocardin.Cell Signal2014 JunLiao XHdoi: 10.1016/j.cellsig.2014.03.001
27156566Myocardin inhibits estrogen receptor alpha-mediated proliferation of human breast cancer MCF-7 cells via regulating MicroRNA expression.IUBMB Life2016 JunXiang Ydoi: 10.1002/iub.1507

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1712722857Silentrs780955626A88A0.2
ACCchr1712746016Missense_MutationnovelT357A0.96
ACCchr1712752709Missense_MutationnovelT474N0.23
BLCAchr1712752923SilentnovelL545L0.24
BLCAchr1712753276Nonsense_MutationnovelS663*0.1
BLCAchr1712666221SilentnovelL11L0.24
BLCAchr1712763114Missense_Mutationrs766441876K763E0.17
BLCAchr1712763125Missense_MutationnovelK766N0.35
BLCAchr1712745916Splice_Regionnovel0.27
BLCAchr1712763390Missense_MutationNAE855K0.49
BLCAchr1712763380Missense_MutationnovelF851L0.1
BLCAchr1712739289Frame_Shift_DelNAS229Afs*40.08
BLCAchr1712722921Frame_Shift_InsnovelI112Nfs*290.4
BLCAchr1712736205Missense_MutationnovelE154K0.17
BLCAchr1712753138Missense_MutationnovelS617Y0.23
BRCAchr1712760698Missense_MutationnovelE746Q0.07
BRCAchr1712736282Silentrs79512286P179P0.31
BRCAchr17126660065'Flanknovel0.46
BRCAchr1712752438Nonsense_Mutationrs778569527R384*0.63SAP
BRCAchr1712746019Missense_Mutationrs766938453G358C0.23
BRCAchr1712753054Missense_MutationNAR589T0.26
BRCAchr1712756484IntronNA0.2
BRCAchr1712763072Splice_SiteNAX749_splice0.73
BRCAchr17127636723'Flanknovel0.45
BRCAchr1712736194Missense_MutationNAA150V0.2
BRCAchr1712756465IntronNA0.7
BRCAchr1712752463Missense_MutationnovelG392D0.06SAP
BRCAchr1712753242Missense_Mutationrs773414826P652S0.18
CESCchr1712763330Missense_MutationNAF835V0.1
CESCchr1712763582Missense_MutationNAF919V0.1
CESCchr1712739289Frame_Shift_DelNAS229Afs*40.33
CESCchr17126660085'Flanknovel0.24
CESCchr1712736158Splice_RegionNA0.39
CESCchr1712752802Missense_MutationnovelS505F0.32
CESCchr1712763517Missense_Mutationrs139170912P897L0.5
CESCchr1712752791SilentNAL501L0.45
CESCchr1712739280SilentnovelQ223Q0.29
COADchr1712763206Missense_MutationNAQ793H0.39
COADchr1712705140Missense_MutationNAR23I0.47
COADchr1712744273Frame_Shift_DelNAP271Qfs*460.19
COADchr1712736247Nonsense_MutationNAR168*0.23
COADchr1712745964SilentNAT339T0.32
COADchr1712763264Missense_MutationnovelS813P0.2
COADchr1712722960Frame_Shift_InsNAN125Kfs*160.19
COADchr1712763152SilentnovelT775T0.3
COADchr1712752444Missense_MutationNAR386W0.24SAP
COADchr1712752585Missense_MutationNAY433D0.2
COADchr1712736171SilentNAV142V0.47
COADchr1712753188Frame_Shift_InsNAQ636Sfs*590.39
COADchr1712722961Frame_Shift_DelnovelN125Tfs*90.37
COADchr1712752653Frame_Shift_DelNAP457Rfs*420.26
COADchr1712666221SilentNAL11L0.55
COADchr1712752653Frame_Shift_DelNAP457Rfs*420.26
COADchr1712752690Missense_Mutationrs531377746A468T0.36
COADchr1712753277SilentnovelS663S0.23
COADchr1712752724Frame_Shift_DelNAS481Pfs*180.48
COADchr1712752724Frame_Shift_DelNAS481Pfs*180.22
COADchr1712739289Frame_Shift_DelNAS229Afs*40.34
COADchr1712756484IntronNA0.62
COADchr1712763204Nonsense_MutationNAQ793*0.33
COADchr1712752735Missense_Mutationrs28730823G483S0.36
COADchr1712752860Missense_MutationNAK524N0.44
COADchr1712763353Silentrs749782783F842F0.31
COADchr1712739289Frame_Shift_DelNAS229Afs*40.38
COADchr1712744399Nonsense_MutationNAR312*0.17
ESCAchr1712752712Missense_MutationnovelF475C0.24
ESCAchr17126660075'Flanknovel0.5
ESCAchr1712746069SilentnovelL374L0.08
ESCAchr1712763131SilentnovelP768P0.24
GBMchr1712745991SilentnovelP348P0.12
GBMchr17127636933'Flanknovel0.14
GBMchr1712746042SilentnovelG365G0.19
GBMchr1712752545Silentrs376729730T419T0.18
GBMchr1712753054Missense_MutationnovelR589I0.2
GBMchr1712752493Missense_MutationNAR402Q0.49SAP
GBMchr1712752472Missense_MutationnovelT395M0.33SAP
GBMchr1712746007Missense_MutationNAS354A0.49
GBMchr1712752746Silentrs781734613P486P0.53
GBMchr1712746044Missense_MutationNAP366L0.13
GBMchr1712744211Missense_MutationnovelR249H0.17
HNSCchr1712758184Missense_Mutationrs748200406P720S0.17
HNSCchr1712763498Missense_MutationnovelE891Q0.17
HNSCchr1712739307Silentrs370115389I232I0.45
HNSCchr1712752681SilentnovelL465L0.18
HNSCchr1712763352Frame_Shift_InsnovelF842Lfs*140.08
HNSCchr1712745981Missense_MutationNAP345L0.33
HNSCchr1712744211Missense_MutationnovelR249H0.33
HNSCchr1712752580Missense_MutationNAP431L0.5
HNSCchr1712744348Missense_MutationnovelL295M0.31
HNSCchr1712763209Missense_MutationnovelI794M0.06
HNSCchr1712752759Missense_MutationnovelV491L0.75
HNSCchr1712722912Missense_Mutationrs751148214D107N0.1
HNSCchr1712736288Silentrs368720240D181D0.19
HNSCchr1712717422Splice_SitenovelX85_splice0.22
HNSCchr1712752676Missense_MutationnovelS463C0.14
HNSCchr1712758255Intronnovel0.32
HNSCchr1712763300Frame_Shift_DelnovelL825Afs*40.18
HNSCchr1712752766Missense_Mutationrs774155323T493M0.3
HNSCchr1712763390Missense_MutationNAE855K0.27
HNSCchr1712752626Missense_MutationnovelF446L0.11
HNSCchr1712715574Splice_RegionnovelK59K0.18
KIRCchr1712722960Frame_Shift_InsNAN125Kfs*160.3
KIRCchr1712739301SilentNAT230T0.18
KIRCchr1712744268Missense_MutationNAY268C0.41
KIRCchr17126660865'Flanknovel0.33
LAMLchr1712752488SilentnovelR400R0.05
LGGchr1712752527Silentrs150316964P413P0.44
LGGchr1712763543Missense_Mutationrs370289662A906T0.21
LGGchr1712752690Missense_Mutationrs531377746A468T0.34
LGGchr1712752438Nonsense_Mutationrs778569527R384*0.4SAP
LGGchr1712752690Missense_Mutationrs531377746A468T0.33
LGGchr1712717364Missense_Mutationrs372478735R66C0.32
LGGchr1712752607Missense_MutationNAS440T0.25
LGGchr1712752602SilentNAS438S0.08
LIHCchr1712752567Missense_MutationNAP427T0.26
LIHCchr1712739285Missense_Mutationrs763274360L225R0.47
LIHCchr1712763241Missense_MutationNAE805G0.65
LIHCchr1712705130Splice_RegionnovelL20L0.29
LIHCchr1712753315Missense_Mutationrs749557798S676L0.6
LIHCchr1712763170SilentNAP781P0.61
LIHCchr1712746029Missense_Mutationrs750753749S361Y0.8
LIHCchr1712666227Missense_MutationnovelR13S0.84
LIHCchr1712722978Missense_MutationNAV129L0.38
LUADchr1712753190SilentNAS634S0.23
LUADchr1712752726Missense_MutationnovelP480T0.07
LUADchr1712763537Missense_MutationnovelF904I0.08
LUADchr1712717383Missense_MutationNAC72F0.19
LUADchr1712763497Missense_MutationNAM890I0.41
LUADchr1712760710Splice_Regionnovel0.3
LUADchr1712763484Missense_MutationNAP886L0.46
LUADchr1712763485SilentNAP886P0.22
LUADchr1712753336Missense_MutationnovelC683F0.32
LUADchr1712763206Missense_MutationNAQ793H0.26
LUADchr1712752525Missense_MutationNAP413T0.11
LUADchr1712763602SilentnovelL925L0.89
LUADchr1712722959SilentNAV122V0.27
LUADchr1712753205SilentNAP639P0.12
LUADchr1712763450Missense_MutationnovelS875C0.2
LUADchr1712753031SilentNAF581F0.32
LUADchr1712752439Missense_Mutationrs552203360R384Q0.13SAP
LUADchr1712739219Missense_MutationNAS203L0.16
LUADchr1712763561Missense_MutationNAP912T0.14
LUADchr1712752544Missense_Mutationrs28730822T419M0.44
LUADchr1712736225Missense_MutationNAD160E0.35
LUADchr1712739311Missense_Mutationrs777122052V234M0.07
LUADchr1712752976Missense_MutationNAL563Q0.26
LUADchr1712763399Missense_MutationNAP858A0.08
LUADchr1712736259Missense_MutationNAP172T0.32
LUADchr1712763565Missense_MutationnovelS913N0.08
LUADchr1712763588Missense_MutationNAD921H0.08
LUADchr1712744328Missense_MutationNAR288P0.15
LUSCchr1712746056Missense_MutationnovelN370I0.2
LUSCchr1712763286Missense_MutationnovelM820K0.33
LUSCchr1712752815Missense_MutationnovelE509D0.33
LUSCchr1712758292Intronnovel0.26
LUSCchr1712753074Missense_MutationnovelC596S0.1
LUSCchr1712760698Nonsense_MutationNAE746*0.43
LUSCchr1712763485SilentNAP886P0.36
LUSCchr1712722860Missense_MutationNAE89D0.3
LUSCchr1712763587SilentnovelL920L0.12
LUSCchr1712722972Missense_MutationNAL127V0.6
LUSCchr17126661765'Flanknovel0.5
LUSCchr17126661775'Flanknovel0.5
LUSCchr1712753154Missense_MutationNAN622K0.2
LUSCchr1712752662SilentnovelI458I0.39
LUSCchr1712753233Missense_MutationNAI649V0.21
LUSCchr1712758202Missense_MutationnovelA726T0.05
LUSCchr1712760670Missense_MutationnovelQ736H0.38
LUSCchr1712752527Silentrs150316964P413P0.28
LUSCchr1712752717Missense_MutationNAD477N0.32
LUSCchr1712705174SilentnovelA34A0.71
LUSCchr1712752779SilentnovelL497L0.28
LUSCchr1712739257Missense_MutationnovelH216N0.37
LUSCchr1712753120Missense_MutationNAN611S0.05
LUSCchr1712763191Silentrs751877797A788A0.27
LUSCchr1712736189SilentnovelT148T0.19
LUSCchr1712763271Missense_MutationnovelS815N0.21
LUSCchr1712763572Missense_MutationNAF915L0.35
OVchr1712736299Missense_MutationNAS185L0.22
OVchr1712736311Missense_Mutationrs144123101S189L0.1
OVchr1712753288Missense_MutationNAA667D0.94
OVchr1712763605Missense_Mutationrs762910353N926K0.29
OVchr1712722887Missense_MutationNAK98N0.15
OVchr1712722928Missense_MutationnovelI112N0.04
OVchr1712752745Missense_MutationnovelP486L0.08
OVchr1712763394Missense_MutationNAI856S0.27
PRADchr1712752486Missense_MutationnovelR400W0.15SAP
PRADchr1712752690Missense_Mutationrs531377746A468T0.35
READchr1712736229Missense_MutationNAL162I0.04
READchr1712736311Missense_Mutationrs144123101S189L0.41
READchr1712736288Silentrs368720240D181D0.3
READchr1712752652Frame_Shift_InsnovelI458Dfs*70.13
READchr1712744279Missense_MutationnovelD272Y0.11
READchr1712752724Frame_Shift_DelNAS481Pfs*180.42
READchr1712752948Missense_MutationnovelR554G0.39
READchr1712722976Missense_MutationnovelP128H0.41
READchr1712763185SilentNAE786E0.4
READchr1712763543Missense_Mutationrs370289662A906T0.49
SARCchr1712722959SilentNAV122V0.33
SARCchr1712736169Missense_MutationnovelV142L0.18
SARCchr1712722931Missense_MutationnovelA113V0.59
SARCchr1712763491Missense_MutationnovelE888D0.13
SARCchr1712752713SilentnovelF475F0.48
SARCchr1712756520Intronnovel0.6
SKCMchr1712752771Missense_MutationNAE495K0.75
SKCMchr1712722884Missense_MutationNAM97I0.21
SKCMchr1712736190Missense_MutationNAD149N0.25
SKCMchr1712763433Missense_MutationNAS869L0.25
SKCMchr1712736325Missense_MutationNAG194R0.51
SKCMchr1712722960Missense_Mutationrs267604740E123K0.51
SKCMchr1712722921Missense_MutationNAE110K0.38
SKCMchr1712722865Missense_MutationnovelS91F0.42
SKCMchr1712739318Missense_MutationnovelA236V0.52
SKCMchr1712752731SilentnovelS481S0.46
SKCMchr1712744400Missense_Mutationrs374008798R312Q0.43
SKCMchr1712746008Missense_MutationNAS354F0.36
SKCMchr1712752558Missense_MutationNAP424S0.37
SKCMchr1712752887Nonsense_MutationNAW533*0.45
SKCMchr1712722980SilentNAV129V0.28
SKCMchr1712744323Silentrs371750716Y286Y0.22
SKCMchr1712753315Missense_Mutationrs749557798S676L0.39
SKCMchr1712763178Missense_MutationNAS784F0.47
SKCMchr1712753134Missense_Mutationrs777004853E616K0.31
SKCMchr1712763517Missense_Mutationrs139170912P897L0.13
SKCMchr1712722981Missense_MutationnovelD130N0.45
SKCMchr1712753107Nonsense_MutationNAQ607*0.36
SKCMchr1712722975Missense_MutationnovelP128S0.25
SKCMchr1712752439Missense_Mutationrs552203360R384Q0.2SAP
SKCMchr1712758238Intronrs3761751030.36
SKCMchr1712752558Missense_MutationNAP424S0.48
SKCMchr1712744190Missense_MutationnovelS242F0.26
SKCMchr1712715536Missense_MutationNAE47K0.52
SKCMchr1712744288Missense_MutationNAA275T0.35
SKCMchr1712722937Missense_MutationNAR115Q0.26
SKCMchr1712752832Missense_MutationNAS515F0.33
SKCMchr1712753246Missense_MutationnovelP653L0.35
SKCMchr1712715536Missense_MutationNAE47K0.45
SKCMchr1712736208Missense_Mutationrs756163272E155K0.41
SKCMchr1712746044Missense_MutationNAP366L0.11
SKCMchr1712753010SilentNAE574E0.53
SKCMchr1712752834Missense_Mutationrs146033223E516K0.52
SKCMchr1712752983Silentrs761036201F565F0.69
SKCMchr1712763338SilentNAG837G0.61
SKCMchr1712753005Missense_MutationNAE573K0.24
SKCMchr1712763337Missense_MutationNAG837E0.94
SKCMchr1712763600Missense_MutationNAL925F0.91
SKCMchr1712736236Missense_Mutationrs200895228P164L0.25
SKCMchr1712752697Missense_MutationnovelS470F0.28
SKCMchr1712717417SilentnovelL83L0.3
SKCMchr1712752558Missense_MutationNAP424S0.55
SKCMchr1712752485Missense_MutationnovelD399E0.28SAP
SKCMchr1712753190SilentNAS634S0.12
SKCMchr1712744304Missense_MutationNAP280L0.46
SKCMchr1712763380SilentNAF851F0.44
SKCMchr1712752558Missense_MutationNAP424S0.38
SKCMchr1712763396Missense_MutationnovelL857V0.37
SKCMchr1712736248Missense_Mutationrs372928138R168Q0.44
SKCMchr1712752808Missense_MutationNAP507L0.34
SKCMchr1712752771Missense_MutationNAE495K0.44
SKCMchr1712753279Missense_MutationnovelS664F0.33
SKCMchr1712752887Nonsense_MutationNAW533*0.31
SKCMchr1712763584Silentrs200336311F919F0.3
SKCMchr1712745929Missense_Mutationrs773131615E328K0.37
SKCMchr1712763488Nonsense_MutationNAW887*0.22
SKCMchr1712744415Missense_MutationnovelG317E0.44
SKCMchr1712758191Missense_MutationNAS722F0.4
SKCMchr1712763484Missense_MutationNAP886L0.24
SKCMchr1712758118Missense_MutationNAP698T0.34
SKCMchr1712736227Missense_Mutationrs757539762G161E0.17
SKCMchr1712722959SilentNAV122V0.68
SKCMchr1712763125Missense_MutationNAK766N0.1
SKCMchr1712752869SilentNAV527V0.24
SKCMchr1712722912Missense_Mutationrs751148214D107N0.38
SKCMchr1712752724Missense_MutationNAS479F0.44
SKCMchr1712722912Missense_Mutationrs751148214D107N0.69
SKCMchr1712752558Missense_MutationNAP424S0.81
SKCMchr1712752580Missense_MutationNAP431L0.29
SKCMchr1712753209Missense_MutationNAG641R0.31
SKCMchr1712705177Missense_MutationnovelN35K0.17
SKCMchr1712745981Missense_MutationNAP345L0.12
SKCMchr1712763209SilentNAI794I0.23
SKCMchr1712736295Missense_MutationNAA184T0.32
SKCMchr1712763433Missense_MutationNAS869L0.46
SKCMchr17127636683'Flanknovel0.33
SKCMchr1712746064Missense_MutationNAD373N0.8SAP
SKCMchr1712763433Missense_MutationNAS869L0.72
SKCMchr1712744287SilentNAK274K0.28
SKCMchr1712758143Missense_MutationNAT706I0.53
SKCMchr1712763219Missense_MutationnovelP798S0.45
SKCMchr1712763220Missense_MutationNAP798L0.45
SKCMchr1712763489Missense_MutationNAE888K0.56
SKCMchr1712758170Missense_MutationNAS715L0.49
SKCMchr1712752807Missense_Mutationrs548285922P507S0.25
SKCMchr1712753054Missense_MutationnovelR589K0.15
SKCMchr1712753315Missense_Mutationrs749557798S676L0.26
SKCMchr1712753036Missense_Mutationrs747188885S583F0.39
SKCMchr1712763220Missense_MutationNAP798L0.15
SKCMchr1712744300Missense_MutationNAP279S0.42
SKCMchr1712753071Missense_Mutationrs538701790E595K0.39
SKCMchr1712736278Missense_Mutationrs767925734S178F0.33
SKCMchr1712744263Silentrs764096193H266H0.31
SKCMchr1712736237Silentrs745617618P164P0.33
SKCMchr1712723008Missense_MutationNAG139S0.36
SKCMchr1712752466Missense_MutationNAT393I0.11SAP
SKCMchr1712758267Intronnovel0.45
SKCMchr1712736280Missense_MutationNAP179S0.25
SKCMchr1712746073Splice_SiteNAX375_splice0.3
SKCMchr1712763178Missense_MutationNAS784F0.48
SKCMchr1712739227Missense_MutationnovelD206N0.45
SKCMchr1712753037SilentnovelS583S0.43
SKCMchr1712753049SilentNAV587V0.13
SKCMchr1712746033SilentNAF362F0.45
SKCMchr1712715541SilentNAF48F0.37
SKCMchr1712722960Missense_Mutationrs267604740E123K0.43
SKCMchr17127636513'Flanknovel0.46
SKCMchr1712758170Missense_MutationNAS715L0.38
SKCMchr1712763562Missense_MutationNAP912L0.62
SKCMchr17127636933'Flanknovel0.61
SKCMchr1712753218Nonsense_MutationNAK644*0.25
SKCMchr1712763611Missense_MutationnovelN928K0.28
SKCMchr1712745920Missense_Mutationrs138967735E325K0.09
SKCMchr1712722937Missense_MutationNAR115Q0.16
SKCMchr1712752676Missense_MutationNAS463F0.45
SKCMchr1712763209SilentNAI794I0.31
SKCMchr1712763584Silentrs200336311F919F0.43
SKCMchr1712744293SilentNAE276E0.11
SKCMchr1712753117Missense_MutationNAG610E0.08
SKCMchr1712744233SilentnovelP256P0.31
SKCMchr1712722890SilentNAL99L0.2
SKCMchr1712752438Nonsense_Mutationrs778569527R384*0.11SAP
SKCMchr1712753310SilentNAV674V0.86
SKCMchr1712745990Missense_MutationNAP348L0.51
SKCMchr1712717356Missense_MutationNAS63F0.19
SKCMchr1712744299SilentnovelS278S0.5
SKCMchr1712758238Intronrs3761751030.61
SKCMchr1712763072Splice_SiteNAX749_splice0.72
SKCMchr1712744261Missense_MutationnovelH266Y0.31
SKCMchr1712752697Missense_MutationnovelS470F0.13
SKCMchr1712752887Nonsense_MutationNAW533*0.24
SKCMchr1712722909Missense_Mutationrs773042903D106N0.4
SKCMchr1712736210SilentnovelE155E0.47
SKCMchr1712752595Missense_MutationnovelS436F0.72
SKCMchr1712763140SilentnovelS771S0.8
SKCMchr1712763551SilentnovelT908T0.37
SKCMchr1712736211Missense_MutationNAD156N0.51
SKCMchr1712758170Missense_MutationNAS715L0.63
SKCMchr1712752527Silentrs150316964P413P0.67
SKCMchr1712752887Nonsense_MutationNAW533*0.43
STADchr1712758136Missense_MutationNAS704P0.12
STADchr1712739289Frame_Shift_DelNAS229Afs*40.17
STADchr1712752482Missense_MutationNAM398I0.07SAP
STADchr1712736271Missense_MutationnovelA176S0.19
STADchr1712752724Frame_Shift_DelNAS481Pfs*180.34
STADchr1712736288Silentrs368720240D181D0.21
STADchr1712744328Missense_MutationNAR288P0.17
STADchr1712722961Frame_Shift_DelnovelN125Tfs*90.11
STADchr1712739289Frame_Shift_DelNAS229Afs*40.2
STADchr1712745960Nonsense_MutationNAS338*0.07
STADchr1712752458SilentNAV390V0.38
STADchr1712752884SilentNAT532T0.21
STADchr1712753241Missense_MutationNAL651F0.16
STADchr1712739289Frame_Shift_DelNAS229Afs*40.47
STADchr1712722961Frame_Shift_DelnovelN125Tfs*90.55
STADchr1712753197Missense_MutationNAH637N0.2
STADchr1712739289Frame_Shift_DelNAS229Afs*40.24
STADchr1712753178Frame_Shift_DelnovelQ632Sfs*120.07
STADchr1712722960Frame_Shift_InsNAN125Kfs*160.32
STADchr1712752493Missense_MutationNAR402Q0.43SAP
STADchr1712736228SilentNAG161G0.16
STADchr1712752800SilentNAG504G0.13
STADchr1712763113SilentNAQ762Q0.28
TGCTchr1712752828Missense_MutationnovelD514N0.18
THCAchr1712752944SilentNAQ552Q0.1
UCECchr1712744293Missense_MutationNAE276D0.34
UCECchr1712763231Missense_Mutationrs756778183D802N0.36
UCECchr1712763578Silentrs548717673I917I0.24
UCECchr1712745963Missense_Mutationrs770965947T339M0.1
UCECchr1712745947Missense_MutationnovelP334S0.16
UCECchr1712752439Missense_Mutationrs552203360R384Q0.29SAP
UCECchr1712756416IntronNA0.34
UCECchr1712758232Intronrs5424140820.12
UCECchr1712715573Missense_Mutationrs752522935K59R0.37
UCECchr1712758210Missense_MutationnovelK728N0.46
UCECchr1712736237Silentrs745617618P164P0.46
UCECchr1712758232Intronrs5424140820.4
UCECchr1712745926Missense_MutationnovelN327H0.3
UCECchr1712763385Missense_Mutationrs763841697A853V0.3
UCECchr1712758228Intronnovel0.54
UCECchr17126661735'Flanknovel0.39
UCECchr1712758266Intronnovel0.12
UCECchr1712722905Silentrs146494556L104L0.22
UCECchr1712753054Missense_MutationnovelR589I0.14
UCECchr1712763372Missense_MutationnovelD849Y0.26
UCECchr1712763593SilentnovelV922V0.14
UCECchr1712756476Intronnovel0.11
UCECchr1712752973Missense_Mutationrs553893165P562L0.11
UCECchr1712717383Missense_MutationNAC72F0.34
UCECchr1712758133Missense_MutationNAP703S0.2
UCECchr1712763231Missense_Mutationrs756778183D802N0.17
UCECchr1712736336Missense_MutationnovelQ197H0.12
UCECchr1712758183SilentnovelQ719Q0.23
UCECchr1712722960Missense_Mutationrs267604740E123K0.45
UCECchr1712753058SilentNAQ590Q0.49
UCECchr17127637463'Flanknovel0.56
UCECchr1712722909Missense_Mutationrs773042903D106N0.36
UCECchr1712722870Missense_MutationnovelP93T0.36
UCECchr1712736311Missense_Mutationrs144123101S189L0.45
UCECchr1712763353Missense_MutationNAF842L0.42
UCECchr1712763447Missense_MutationnovelD874N0.41
UCECchr17126660725'Flanknovel0.18
UCECchr1712722960Frame_Shift_InsNAN125Kfs*160.21
UCECchr1712744317SilentnovelS284S0.28
UCECchr1712763484Missense_MutationNAP886L0.26
UCECchr1712744411Missense_MutationNAL316I0.45
UCECchr1712744191SilentnovelS242S0.47
UCECchr1712753081Frame_Shift_InsnovelP599Tfs*40.3
UCECchr1712763105Missense_MutationNAC760R0.28
UCECchr1712739289Frame_Shift_DelNAS229Afs*40.28
UCECchr1712752492Nonsense_MutationNAR402*0.28SAP
UCECchr1712745964SilentNAT339T0.51
UCECchr1712756476Intronnovel0.46
UCECchr1712752724Frame_Shift_DelNAS481Pfs*180.31
UCECchr1712752984Missense_MutationnovelL566M0.41
UCECchr17126660895'Flanknovel0.47
UCECchr1712746029Missense_Mutationrs750753749S361Y0.33
UCECchr1712752439Missense_Mutationrs552203360R384Q0.24SAP
UCECchr1712752527Silentrs150316964P413P0.27
UCECchr1712763185Missense_MutationnovelE786D0.2
UCECchr1712763428SilentnovelQ867Q0.13
UCECchr1712739289Frame_Shift_DelNAS229Afs*40.5
UCECchr1712722936Nonsense_MutationnovelR115*0.29
UCECchr1712744380Missense_MutationnovelQ305H0.33
UCECchr1712753193SilentnovelP635P0.48
UCECchr17126660895'Flanknovel0.44
UCECchr1712758232Intronrs5424140820.42
UCECchr17127637463'Flanknovel0.29
UCECchr1712752575Silentrs772651496T429T0.69
UCECchr1712739206Missense_MutationnovelL199I0.3
UCECchr1712753337Nonsense_MutationnovelC683*0.38
UCECchr1712715560Missense_Mutationrs151225315L55V0.53
UCECchr1712744400Missense_Mutationrs374008798R312Q0.45
UCECchr1712739289Frame_Shift_DelNAS229Afs*40.5
UCECchr1712736248Missense_Mutationrs372928138R168Q0.31
UCECchr1712744327Missense_Mutationrs760880564R288W0.34
UCECchr1712763353Missense_MutationNAF842L0.41
UCECchr1712763285Missense_MutationnovelM820V0.16
UCECchr1712736289Missense_Mutationrs764293311A182T0.35
UCECchr1712763242SilentnovelE805E0.22
UCECchr1712756515Intronrs7649787210.35
UCECchr1712736222SilentNAS159S0.34
UCECchr1712753027Missense_MutationnovelP580H0.42
UCECchr1712753242Frame_Shift_DelnovelP653Hfs*650.43
UCECchr1712739244SilentnovelA211A0.33
UCECchr1712736280Missense_MutationNAP179T0.17
UCECchr1712722961Frame_Shift_DelnovelN125Tfs*90.28
UCECchr1712722967Missense_MutationNAN125S0.6
UCECchr1712744344SilentNAQ293Q0.43
UCECchr1712722960Frame_Shift_InsNAN125Kfs*160.42
UCECchr1712752439Missense_Mutationrs552203360R384Q0.3SAP
UCECchr1712763353Missense_MutationNAF842L0.4
UCECchr1712763265Missense_MutationnovelS813F0.08
UCECchr1712752439Missense_Mutationrs552203360R384Q0.18SAP
UCECchr1712752659Silentrs267604743P457P0.43
UCECchr1712763236SilentnovelS803S0.19
UCECchr1712763578Silentrs548717673I917I0.44
UCECchr17127638233'Flanknovel0.41
UCECchr1712763353Missense_MutationNAF842L0.35
UCECchr1712763318Missense_Mutationrs778429833E831K0.39
UCECchr1712752818SilentnovelL510L0.34
UCECchr17127636583'FlankNA0.29
UCECchr1712739327Missense_MutationnovelK239T0.47
UCECchr1712752493Missense_MutationNAR402Q0.48SAP
UCECchr1712739238Missense_MutationnovelD209E0.35
UCECchr1712752439Missense_Mutationrs552203360R384Q0.29SAP

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.18750.18166
ESCADEL0.40220.074408
READDEL0.67880.077076
SARCAMP0.35419.3248e-17
THCADEL0.0140.221
UCECDEL0.24860.00043918
UCSDEL0.71430.044844

Survival Analysis
CancerP-value Q-value
KIRC0.002

Kaplan-Meier Survival Analysis

SARC0.015

Kaplan-Meier Survival Analysis

MESO0.0057

Kaplan-Meier Survival Analysis

LUSC0.0033

Kaplan-Meier Survival Analysis

KIRP0.00014

Kaplan-Meier Survival Analysis

BLCA0.026

Kaplan-Meier Survival Analysis

LIHC0.00065

Kaplan-Meier Survival Analysis

LUAD0.029

Kaplan-Meier Survival Analysis

UVM0.042

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000141052 (Gene tree)
Gene ID
93649
Gene Symbol
MYOCD
Alias
MYCD
Full Name
myocardin
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
103,060 bases
Position
chr17:12,665,890-12,768,949
Accession
16067
RBP type
canonical RBP
Summary
This gene encodes a nuclear protein, which is expressed in heart, aorta, and in smooth muscle cell-containing tissues. It functions as a transcriptional co-activator of serum response factor (SRF) and modulates expression of cardiac and smooth muscle-specific SRF-target genes, and thus may play a crucial role in cardiogenesis and differentiation of the smooth muscle cell lineage. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Sep 2009]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000400148SAPPF02037.271.2e-0911
ENSP00000341835SAPPF02037.273.6e-0911
ENSP00000401678SAPPF02037.273.8e-0911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000343344MYOCD-2012817-ENSP00000341835938 (aa)-Q8IZQ8
ENST00000425538MYOCD-2038466XM_005256863ENSP00000401678986 (aa)XP_005256920Q8IZQ8
ENST00000579237MYOCD-205565-ENSP0000046269441 (aa)-J3KSX3
ENST00000395988MYOCD-2022344--- (aa)--
ENST00000443061MYOCD-2043632-ENSP00000400148648 (aa)-Q6N065
Gene Model
Click here to download ENSG00000141052's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000141052Body Height4.33236853163012E-517903300
ENSG00000141052Hip6.66326637042001E-517903296
ENSG00000141052Platelet Function Tests3.0309600E-005-
ENSG00000141052Platelet Function Tests1.5654100E-005-
ENSG00000141052Platelet Function Tests2.7432600E-005-
ENSG00000141052Platelet Function Tests3.0075500E-005-
ENSG00000141052Platelet Function Tests4.0900000E-006-
ENSG00000141052Platelet Function Tests7.1900000E-007-
ENSG00000141052Testosterone4E-622675492
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000141052rs728112941712715363GAtrial fibrillation30061737[1.05-1.10]1.07EFO_0000275
ENSG00000141052rs728112941712715363GAtrial fibrillation29892015[1.05-1.09]1.07EFO_0000275
ENSG00000141052rs19844811712734425CPR interval30046033[0.56-1.04] ms decrease0.8EFO_0004462
ENSG00000141052rs99058201712734054GTestosterone levels22675492[NR] unit decrease0.094EFO_0004908
ENSG00000141052rs568757521712695685CFear of pain28701861unit increase2.91EFO_0008330
ENSG00000141052rs568757521712695685CFear of severe pain28701861unit increase1.38EFO_0008338
ENSG00000141052rs72245911712733416TDelayed reward discounting30265060[0.12-0.3] unit decrease0.20848EFO_0008476
ENSG00000141052rs357128721712732554GPR interval30679814[0.93-1.89] unit increase1.408EFO_0004462
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000141052's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000141052MYOCD8060.606ENSAPOG00000016801mrtfba6940.244Acanthochromis_polyacanthus
ENSG00000141052MYOCD8352.941ENSAPOG00000014773mrtfab5840.589Acanthochromis_polyacanthus
ENSG00000141052MYOCD9860.000ENSAPOG00000023842mrtfbb9833.750Acanthochromis_polyacanthus
ENSG00000141052MYOCD9841.553ENSAPOG00000003395-9348.180Acanthochromis_polyacanthus
ENSG00000141052MYOCD9980.718ENSAMEG00000002819MYOCD9980.410Ailuropoda_melanoleuca
ENSG00000141052MYOCD6172.000ENSAMEG00000011285MRTFB7444.407Ailuropoda_melanoleuca
ENSG00000141052MYOCD9535.884ENSAMEG00000011151MRTFA9935.967Ailuropoda_melanoleuca
ENSG00000141052MYOCD7865.625ENSACIG00000006315mrtfba7839.789Amphilophus_citrinellus
ENSG00000141052MYOCD7443.852ENSACIG00000000485MYOCD9650.000Amphilophus_citrinellus
ENSG00000141052MYOCD9041.219ENSAOCG00000022192mrtfbb9430.553Amphiprion_ocellaris
ENSG00000141052MYOCD10090.244ENSAOCG00000010113-10044.301Amphiprion_ocellaris
ENSG00000141052MYOCD8352.941ENSAPEG00000021018mrtfab5738.436Amphiprion_percula
ENSG00000141052MYOCD9944.856ENSAPEG00000017512-9946.193Amphiprion_percula
ENSG00000141052MYOCD9860.000ENSAPEG00000011634mrtfbb9832.785Amphiprion_percula
ENSG00000141052MYOCD5939.123ENSATEG00000007179mrtfab5739.504Anabas_testudineus
ENSG00000141052MYOCD10090.244ENSATEG00000023953MYOCD10046.765Anabas_testudineus
ENSG00000141052MYOCD8063.636ENSATEG00000009415mrtfba7141.087Anabas_testudineus
ENSG00000141052MYOCD9860.000ENSATEG00000004434mrtfbb9833.627Anabas_testudineus
ENSG00000141052MYOCD6041.483ENSAPLG00000014434MRTFA6440.472Anas_platyrhynchos
ENSG00000141052MYOCD9892.500ENSAPLG00000013526MYOCD10065.025Anas_platyrhynchos
ENSG00000141052MYOCD6172.000ENSAPLG00000014081MRTFB8239.275Anas_platyrhynchos
ENSG00000141052MYOCD8739.970ENSACAG00000005348MRTFA8138.369Anolis_carolinensis
ENSG00000141052MYOCD5975.000ENSACAG00000003638MRTFB9534.158Anolis_carolinensis
ENSG00000141052MYOCD9764.386ENSACAG00000017473MYOCD9465.419Anolis_carolinensis
ENSG00000141052MYOCD98100.000ENSANAG00000037357MYOCD10097.015Aotus_nancymaae
ENSG00000141052MYOCD9056.757ENSANAG00000032247MRTFB7242.440Aotus_nancymaae
ENSG00000141052MYOCD9855.000ENSANAG00000035209MRTFA9936.283Aotus_nancymaae
ENSG00000141052MYOCD7865.625ENSACLG00000017129mrtfba5340.104Astatotilapia_calliptera
ENSG00000141052MYOCD10090.244ENSACLG00000024360-10042.608Astatotilapia_calliptera
ENSG00000141052MYOCD8440.850ENSAMXG00000017729mrtfbb9537.223Astyanax_mexicanus
ENSG00000141052MYOCD9890.000ENSAMXG00000036216MYOCD10049.126Astyanax_mexicanus
ENSG00000141052MYOCD9855.000ENSBTAG00000008728MRTFB7442.517Bos_taurus
ENSG00000141052MYOCD9855.000ENSBTAG00000002630MRTFA8243.505Bos_taurus
ENSG00000141052MYOCD9895.000ENSBTAG00000035706MYOCD10084.166Bos_taurus
ENSG00000141052MYOCD8461.856ENSCJAG00000002850MRTFA9161.856Callithrix_jacchus
ENSG00000141052MYOCD98100.000ENSCJAG00000004683MYOCD10094.995Callithrix_jacchus
ENSG00000141052MYOCD9056.757ENSCJAG00000015925MRTFB9634.837Callithrix_jacchus
ENSG00000141052MYOCD9536.419ENSCAFG00000001154MRTFA9936.578Canis_familiaris
ENSG00000141052MYOCD9895.000ENSCAFG00000017863MYOCD10083.956Canis_familiaris
ENSG00000141052MYOCD5975.000ENSCAFG00000018810MRTFB7643.182Canis_familiaris
ENSG00000141052MYOCD9737.177ENSCAFG00020002129MRTFA9936.578Canis_lupus_dingo
ENSG00000141052MYOCD5975.000ENSCAFG00020024137MRTFB7641.626Canis_lupus_dingo
ENSG00000141052MYOCD9483.842ENSCAFG00020001034MYOCD9884.520Canis_lupus_dingo
ENSG00000141052MYOCD9895.000ENSCHIG00000021206MYOCD10084.272Capra_hircus
ENSG00000141052MYOCD9855.000ENSCHIG00000018957MRTFB7442.662Capra_hircus
ENSG00000141052MYOCD8140.226ENSCHIG00000016119MRTFA9937.370Capra_hircus
ENSG00000141052MYOCD98100.000ENSTSYG00000014685MYOCD10090.226Carlito_syrichta
ENSG00000141052MYOCD9852.500ENSTSYG00000005893MRTFB7341.612Carlito_syrichta
ENSG00000141052MYOCD7936.542ENSCAPG00000014472MRTFB7534.271Cavia_aperea
ENSG00000141052MYOCD9897.500ENSCAPG00000007773MYOCD10084.984Cavia_aperea
ENSG00000141052MYOCD9855.000ENSCPOG00000009883MRTFA9244.154Cavia_porcellus
ENSG00000141052MYOCD5975.000ENSCPOG00000010356MRTFB7440.833Cavia_porcellus
ENSG00000141052MYOCD9897.500ENSCPOG00000002421MYOCD10085.816Cavia_porcellus
ENSG00000141052MYOCD98100.000ENSCCAG00000035642MYOCD10096.383Cebus_capucinus
ENSG00000141052MYOCD9855.000ENSCCAG00000027355MRTFA9162.000Cebus_capucinus
ENSG00000141052MYOCD9056.757ENSCCAG00000036874MRTFB8139.250Cebus_capucinus
ENSG00000141052MYOCD9857.500ENSCATG00000044298MRTFA9936.971Cercocebus_atys
ENSG00000141052MYOCD9991.549ENSCATG00000031443MYOCD9991.549Cercocebus_atys
ENSG00000141052MYOCD9056.757ENSCATG00000039198MRTFB9634.387Cercocebus_atys