EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
15619008Myosin regulation in the migration of tumor cells and leukocytes within a three-dimensional collagen matrix.Cell Mol Life Sci2005 JanBastian P-
24858044miR-200a-mediated suppression of non-muscle heavy chain IIb inhibits meningioma cell migration and tumor growth in vivo.Oncogene2015 Apr 2Senol Odoi: 10.1038/onc.2014.120

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr178521227SilentNAS641S0.47
BLCAchr178492970Nonsense_MutationnovelE1391*0.13
BLCAchr178480268SilentnovelK1782K0.35
BLCAchr178546655SilentNAQ379Q0.26
BLCAchr178513882SilentNAK808K0.57
BLCAchr178481374Missense_Mutationrs199665530E1707K0.26
BLCAchr178546595SilentnovelP399P0.66
BLCAchr178477025Missense_MutationnovelM1879I0.11
BLCAchr178623184Missense_MutationnovelI21M0.13
BLCAchr178545459Missense_MutationnovelE464Q0.39
BLCAchr178518779Nonsense_MutationnovelE755*0.34
BLCAchr178500927Missense_MutationNAE1184K0.22
BLCAchr178475809Missense_MutationNAE1976Q0.71
BLCAchr178548771Frame_Shift_InsnovelG303Tfs*70.08
BLCAchr178499377Missense_MutationnovelE1251Q0.34
BLCAchr178506490Splice_SitenovelX1041_splice0.31
BLCAchr178535898Missense_MutationnovelE537K0.48
BLCAchr178492791SilentNAQ1450Q0.2
BLCAchr178623093Missense_MutationnovelE52Q0.43
BLCAchr178484180SilentnovelK1680K0.19
BLCAchr178477029Missense_MutationnovelR1878P0.24
BLCAchr178500858Missense_MutationnovelE1207Q0.41
BLCAchr178520880Missense_MutationNAQ726H0.1
BLCAchr178604941Missense_MutationNAK129N0.19
BLCAchr178518747Missense_MutationNAQ765H0.5
BLCAchr178512583Missense_MutationnovelM909I0.32
BLCAchr178500851Missense_MutationnovelS1209L0.4
BLCAchr178623111Missense_MutationnovelE46Q0.53
BLCAchr178520891Nonsense_MutationnovelE723*0.17
BRCAchr178577245SilentNAH208H0.42
BRCAchr178506460Missense_MutationnovelQ1051K0.15
BRCAchr1784746783'UTRnovel0.26
BRCAchr178480316Splice_RegionnovelV1766V0.26
BRCAchr178535787Missense_MutationNAD574Y0.77
BRCAchr178481383SilentnovelR1704R0.17
BRCAchr178493814Missense_MutationNAK1345N0.32
BRCAchr178481328Missense_MutationNAS1722F0.19
BRCAchr178521244Missense_Mutationrs778892637E636K0.34
BRCAchr178481359Missense_MutationNAE1712Q0.59
BRCAchr178577236Splice_RegionnovelP211P0.07
BRCAchr178512570Missense_MutationNAA914P0.26
BRCAchr1784757723'UTRnovel0.18
BRCAchr178577254Missense_MutationnovelR205S0.07
BRCAchr178577255Missense_MutationNAR205K0.07
BRCAchr178518712Missense_MutationNAH777R0.33
BRCAchr178513818Missense_MutationNAR830W0.7
BRCAchr1784756863'UTRnovel0.59
BRCAchr178492423SilentnovelK1484K0.09
BRCAchr178492484Missense_MutationNAS1464C0.16
BRCAchr178495186Missense_MutationNAK1305T0.32
BRCAchr178521167SilentNAL661L0.34
BRCAchr178487552Missense_Mutationrs776217752R1612W0.32
BRCAchr178492941SilentNAD1400D0.44
BRCAchr178492838Missense_MutationNAD1435N0.67
BRCAchr178492484Missense_MutationNAS1464C0.12
CESCchr178500913Missense_MutationnovelK1188N0.05
CESCchr178535787Missense_MutationnovelD574N0.09
CESCchr178478398SilentNAL1851L0.24
CESCchr178478370Missense_Mutationrs748972290E1861K0.38
CESCchr178542241Missense_MutationNAE481Q0.39
CESCchr178490444Missense_MutationnovelL1563F0.38
CESCchr178542181Missense_MutationnovelR501C0.29
CESCchr178504836Missense_MutationNAE1122K0.13
CESCchr178508626Missense_MutationnovelE1017K0.21
CESCchr178492431Missense_MutationNAE1482Q0.21
CESCchr1784743193'UTRnovel0.41
CESCchr178481395Missense_MutationnovelE1700K0.27
CESCchr178604922Missense_MutationnovelE136Q0.17
CESCchr178492979Missense_MutationNAE1388K0.57
CESCchr178546601SilentNAL397L0.32
CESCchr178493847SilentNAL1334L0.58
CESCchr178475854Missense_MutationnovelE1961K0.49
CESCchr178487564Missense_MutationNAE1608K0.36
CESCchr178521227SilentNAS641S0.41
COADchr178552088Missense_MutationnovelI283L0.28
COADchr178475916Missense_Mutationrs370970711R1940Q0.39
COADchr178548740Missense_MutationNAG313C0.35
COADchr178481378Silentrs200645746H1705H0.45
COADchr178509887SilentnovelV974V0.28
COADchr178480163SilentnovelS1817S0.26
COADchr178535844Missense_MutationnovelQ555K0.19
COADchr178521227SilentNAS641S0.79
COADchr178513831SilentnovelA825A0.22
COADchr178477034Silentrs145331684N1876N0.34
COADchr178521226Missense_MutationnovelA642T0.06
COADchr178535843Missense_MutationnovelQ555R0.1
COADchr178513800Nonsense_MutationnovelR836*0.09
COADchr178521144Missense_Mutationrs773722498R669Q0.2
COADchr178521279Missense_MutationNAR624H0.26
COADchr178548719Missense_MutationnovelQ320K0.18
COADchr178548721Missense_MutationnovelG319E0.16
COADchr178506384Missense_Mutationrs150206681A1076V0.3
COADchr178623123Missense_MutationNAR42C0.17
COADchr178492303SilentNAG1524G0.84
COADchr178478356Silentrs766085338A1865A0.39
COADchr178499417Silentrs772713569A1237A0.14
COADchr178492941SilentNAD1400D0.31
COADchr178535763Missense_MutationNAG582R0.44
COADchr178490512Missense_MutationnovelQ1540R0.26
COADchr178500833Missense_MutationNAA1215V0.24
COADchr178475867Silentrs751540483S1956S0.4
COADchr178546562Frame_Shift_DelnovelA411Pfs*110.15
COADchr178480483SilentnovelI1738I0.2
COADchr178477040Missense_MutationnovelK1874N0.38
COADchr178545549Missense_MutationnovelR434C0.24
DLBCchr178552074SilentnovelL287L0.09
ESCAchr178518683Missense_MutationnovelT787P0.11
ESCAchr1784746833'UTRrs1122365560.32
ESCAchr178490499Missense_MutationnovelM1544I0.28
ESCAchr178506396Missense_MutationnovelA1072E0.08
GBMchr178535391Frame_Shift_DelnovelF614*0.28
GBMchr178512488Missense_MutationnovelL941H0.12
GBMchr178481382Missense_Mutationrs150261129R1704Q0.21
GBMchr178506431Silentrs185230215L1060L0.46
GBMchr178509847Missense_MutationnovelL988M0.43
GBMchr178499311Missense_MutationnovelR1273G0.42
GBMchr1784757613'UTRnovel0.15
GBMchr178552070Missense_MutationnovelS289A0.46
GBMchr178506355Missense_MutationnovelA1086T0.41
GBMchr1784757333'UTRnovel0.06
GBMchr178506328Missense_Mutationrs753724964A1095T0.38
HNSCchr178480271Missense_MutationnovelQ1781H0.32
HNSCchr178484212Missense_MutationnovelE1670K0.15
HNSCchr178499383Missense_MutationnovelE1249Q0.39
HNSCchr178623002Missense_MutationnovelP82R0.29
HNSCchr178535442SilentnovelV603V0.19
HNSCchr178480487Missense_Mutationrs765309529R1737Q0.48
HNSCchr178495211Missense_MutationnovelE1297K0.35
HNSCchr178622982Missense_MutationnovelD89N0.21
HNSCchr178480135Missense_MutationnovelE1827Q0.05
HNSCchr178495222Missense_Mutationrs775866479S1293F0.35
HNSCchr178475854Missense_MutationNAE1961Q0.59
HNSCchr178490499Missense_MutationnovelM1544I0.51
HNSCchr178508597SilentnovelA1026A0.35
HNSCchr178548387Missense_MutationnovelS352L0.49
HNSCchr178623242Missense_MutationnovelA2G0.07
HNSCchr178508628Missense_MutationnovelA1016D0.4
HNSCchr178509863Missense_MutationnovelK982N0.23
HNSCchr178546631Missense_MutationnovelM387I0.27
HNSCchr178553958Missense_MutationnovelT263A0.52
HNSCchr178480190SilentnovelV1808V0.16
HNSCchr178622930Missense_MutationnovelK106R0.45
HNSCchr178492940Missense_Mutationrs201117056A1401T0.61
HNSCchr178509949Missense_MutationnovelD954N0.12
KIRCchr178506433Missense_MutationNAL1060V0.37
KIRCchr178518674Missense_MutationNAI790L0.34
KIRCchr178589084Missense_MutationnovelC176Y0.09
KIRCchr178535865Frame_Shift_InsnovelT548Cfs*260.05
KIRPchr178548708Frame_Shift_DelnovelD324Ifs*120.1
KIRPchr178535430SilentnovelL607L0.56
KIRPchr178500830Missense_MutationnovelK1216T0.37
KIRPchr178545462Missense_MutationnovelF463L0.38
KIRPchr178484261SilentnovelQ1653Q0.53
KIRPchr178500865SilentnovelA1204A0.36
LAMLchr178577332Missense_MutationnovelE179D0.07
LAMLchr178492458Missense_MutationnovelR1473W0.08
LGGchr178521257SilentNAV631V0.35
LGGchr178623202Frame_Shift_DelnovelF15Cfs*140.23
LGGchr178490357Missense_MutationnovelR1592W0.07
LGGchr178512551Missense_MutationnovelL920S0.4
LGGchr178604832Missense_MutationnovelL166I0.22
LIHCchr178520980Missense_MutationnovelH693L0.2
LIHCchr178487559SilentNAR1609R0.72
LIHCchr1784756853'UTRnovel0.88
LIHCchr178480159SilentnovelL1819L0.09
LUADchr178506467SilentnovelK1048K0.07
LUADchr178504714Silentrs575524243T1162T0.06
LUADchr178481378Silentrs200645746H1705H0.16
LUADchr178552090Missense_MutationNAH282R0.19
LUADchr178490369Missense_MutationnovelE1588K0.16
LUADchr178545464Missense_MutationNAG462E0.23
LUADchr178552145Splice_SitenovelX264_splice0.14
LUADchr178480174Missense_MutationnovelA1814T0.1
LUADchr1786232595'UTRrs3731678740.1
LUADchr178512646Missense_MutationNAE888D0.13
LUADchr178577339Splice_SitenovelX177_splice0.56
LUADchr178490424Missense_MutationnovelM1569I0.46
LUADchr178623143Missense_MutationnovelL35P0.09
LUADchr178542141Missense_MutationNAD514G0.06
LUSCchr178499357Silentrs780658326L1257L0.23
LUSCchr178623142SilentnovelL35L0.04
LUSCchr178513641Missense_MutationnovelQ850L0.19
LUSCchr178480494Missense_MutationnovelE1735K0.28
LUSCchr178569798Frame_Shift_DelnovelQ217Sfs*180.07
LUSCchr178506438Missense_MutationnovelR1058T0.55
LUSCchr178493835SilentnovelI1338I0.18
LUSCchr178492413Missense_Mutationrs762499918L1488V0.23
LUSCchr178622921Missense_MutationNAY109C0.32
LUSCchr178569808Frame_Shift_InsNAE213Gfs*30.25
OVchr178622909Missense_MutationnovelL113R0.2
OVchr1784757463'UTRnovel0.29
OVchr178492978Missense_MutationNAE1388G0.68
OVchr1784757643'UTRnovel0.09
OVchr178492297Splice_Regionrs374580626N1526N0.43
OVchr178480296Missense_MutationnovelL1773P0.05
OVchr178518656Missense_Mutationrs755114317V796I0.88
PAADchr178476984Missense_Mutationrs778680463A1893V0.2
PAADchr178478362SilentNAR1863R0.04
PAADchr178487487Silentrs375050384I1633I0.2
PAADchr178542169Missense_MutationNAE505K0.19
PAADchr178545533Missense_Mutationrs768634600R439H0.19
PAADchr178495193Missense_MutationnovelG1303C0.05
PRADchr178577255Missense_MutationNAR205K0.53
PRADchr178506427Missense_MutationNAG1062R0.27
PRADchr178476984Missense_Mutationrs778680463A1893V0.28
PRADchr178622903Missense_MutationNAY115S0.34
PRADchr178545549Missense_MutationnovelR434C0.31
PRADchr1784756203'UTRnovel0.27
PRADchr178545507Missense_MutationnovelK448E0.39
READchr178604915Missense_MutationNAI138S0.13
READchr178487478SilentNAA1636A0.35
READchr178506419SilentnovelT1064T0.3
READchr178508617Nonsense_MutationnovelE1020*0.42
READchr178552086SilentNAI283I0.29
READchr1786232595'UTRrs3731678740.43
READchr178545454Missense_MutationNAI465M0.73
READchr178548328Missense_MutationnovelM372V0.23
READchr178622993Missense_MutationNAS85F0.7
SARCchr178476960Missense_MutationNAR1901H0.21
SARCchr178480470Missense_MutationnovelE1743K0.5
SARCchr178546659Missense_Mutationrs757539505A378V0.09
SARCchr178487438Missense_MutationnovelL1650I0.11
SARCchr178518907Missense_MutationnovelD742Y0.34
SKCMchr178622969Missense_MutationnovelL93S0.46
SKCMchr178546582Missense_MutationnovelG404C0.09
SKCMchr178513891Silentrs185750723A805A0.29
SKCMchr178518789Splice_RegionNAI751I0.47
SKCMchr178521286Splice_SiteNAX622_splice0.28
SKCMchr178492805SilentNAL1446L0.25
SKCMchr178604883Missense_MutationNAE149K0.42
SKCMchr178521199Missense_MutationnovelR651C0.46
SKCMchr178492375SilentNAE1500E0.19
SKCMchr178513636Missense_MutationNAE852K0.1
SKCMchr178490522Silentrs377742356L1537L0.44
SKCMchr178569725Missense_MutationnovelR241C0.75
SKCMchr178504770Missense_MutationNAL1144V0.51
SKCMchr178476927Missense_MutationnovelE1912G0.16
SKCMchr178548731Missense_Mutationrs769801603P316S0.11
SKCMchr178548374Missense_MutationNAF356L0.23
SKCMchr178493763SilentNAL1362L0.83
SKCMchr178512486Nonsense_MutationNAQ942*0.27
SKCMchr1786232625'UTRnovel0.32
SKCMchr178604949Missense_MutationNAP127S0.49
SKCMchr178506431Silentrs185230215L1060L0.24
SKCMchr178546639Missense_MutationNAL385F0.48
SKCMchr178569766Missense_MutationNAS227L0.16
SKCMchr178504790Missense_MutationNAA1137V0.18
SKCMchr178548745Missense_MutationNAS311F0.15
SKCMchr178546583Silentrs760755512V403V0.35
SKCMchr178577286Missense_MutationnovelL195F0.35
STADchr178492843Missense_Mutationrs539038765T1433M0.22
STADchr178622980SilentnovelD89D0.12
STADchr178504860Nonsense_MutationNAR1114*0.08
STADchr178512468Frame_Shift_DelnovelM948Cfs*120.39
STADchr178513799Missense_MutationNAR836Q0.22
STADchr178480311Missense_MutationnovelT1768I0.2
STADchr178548380SilentNAL354L0.24
STADchr178492954Missense_MutationNAK1396R0.2
STADchr178500868SilentNAT1203T0.19
STADchr178506428Silentrs138732743D1061D0.21
STADchr178477033Missense_Mutationrs371705630A1877T0.08
STADchr178487486Missense_Mutationrs184124261E1634K0.39
STADchr178506384Missense_Mutationrs150206681A1076V0.33
STADchr178548771SilentNAE302E0.18
STADchr178490462Missense_MutationNAA1557T0.27
STADchr178506384Missense_Mutationrs150206681A1076V0.33
STADchr178542231Missense_MutationNAQ484L0.24
STADchr178478385Missense_MutationnovelM1856V0.36
STADchr178487443Missense_MutationnovelR1648H0.05
STADchr178623146Frame_Shift_DelnovelK34Sfs*20.22
STADchr178506420Missense_Mutationrs201075759T1064M0.28
STADchr178542145SilentNAL513L0.47
STADchr178508655Missense_MutationNAR1007H0.4
STADchr178495147In_Frame_InsnovelL1317dup0.33
STADchr178506328Missense_Mutationrs753724964A1095T0.25
STADchr178622999Missense_MutationNAK83T0.38
STADchr178512464Missense_MutationNAQ949P0.09
STADchr178518741SilentNAK767K0.19
STADchr178478414Missense_MutationNAR1846H0.26
STADchr178487591Missense_Mutationrs760846004R1599W0.14
STADchr178546642Missense_MutationNAL384F0.19
STADchr178552107Frame_Shift_DelnovelD277Mfs*190.2
STADchr178521187Missense_MutationNAQ655K0.13
STADchr178492938Silentrs35712248A1401A0.28
STADchr178480152Missense_MutationNAA1821V0.18
STADchr178475823Missense_MutationNAQ1971R0.07
STADchr178622997Missense_MutationNAF84V0.16
STADchr178480500Missense_Mutationrs371077973R1733C0.37
STADchr178481377Missense_Mutationrs772298747A1706T0.19
STADchr178476928Missense_Mutationrs778816874E1912K0.41
STADchr178480499Missense_Mutationrs371976533R1733H0.8
STADchr178622967Missense_MutationNAT94A0.31
TGCTchr178535883Missense_MutationnovelP542S0.14
TGCTchr178478359Missense_MutationnovelH1864Q0.05
THCAchr178478394Nonsense_MutationnovelE1853*0.1
UCECchr178535808Nonsense_MutationNAR567*0.31
UCECchr178499475Missense_MutationNAF1218S0.23
UCECchr178492347Nonsense_MutationNAR1510*0.3
UCECchr178475867Silentrs751540483S1956S0.37
UCECchr178493020Missense_MutationnovelA1374D0.4
UCECchr178535405Missense_MutationnovelA616T0.31
UCECchr178576665Intronnovel0.36
UCECchr178548376Missense_MutationnovelF356I0.38
UCECchr178508601Missense_MutationnovelL1025S0.09
UCECchr178495214Missense_MutationnovelL1296M0.04
UCECchr178622947Silentrs775686660S100S0.43
UCECchr178518788Missense_MutationnovelR752W0.28
UCECchr178623241Silentrs375726376A2A0.38
UCECchr178487553Missense_MutationnovelQ1611H0.34
UCECchr178490472Silentrs143979126D1553D0.28
UCECchr178506431Silentrs185230215L1060L0.39
UCECchr1784744023'UTRnovel0.35
UCECchr1784747033'UTRnovel0.33
UCECchr178552086SilentNAI283I0.09
UCECchr178604975Missense_MutationnovelS118Y0.2
UCECchr178475913Missense_MutationnovelS1941Y0.07
UCECchr178493757SilentNAK1364K0.15
UCECchr178520880Missense_MutationNAQ726H0.26
UCECchr178546560Missense_MutationnovelA411V0.06
UCECchr178476980Silentrs183489368T1894T0.55
UCECchr1784749443'UTRnovel0.65
UCECchr178604915Missense_MutationNAI138S0.13
UCECchr178487479Missense_Mutationrs778316906A1636V0.21
UCECchr178509929Silentrs139264814D960D0.21
UCECchr178623245Translation_Start_SitenovelM1?0.21
UCECchr178521279Missense_MutationNAR624H0.13
UCECchr178546580SilentnovelG404G0.17
UCECchr178509910Nonsense_MutationNAQ967*0.52
UCECchr178513540Nonsense_MutationnovelQ884*0.06
UCECchr178535486Missense_MutationNAD589H0.24
UCECchr178490403SilentnovelF1576F0.39
UCECchr178520994SilentnovelG688G0.36
UCECchr178535808Nonsense_MutationNAR567*0.57
UCECchr178552086SilentNAI283I0.1
UCECchr178623046Missense_MutationnovelK67N0.28
UCECchr178521144Missense_Mutationrs773722498R669Q0.28
UCECchr178487548Missense_Mutationrs746613898A1613V0.36
UCECchr178604972Missense_MutationnovelG119E0.29
UCECchr178487499Silentrs147066424L1629L0.45
UCECchr178490357Missense_MutationnovelR1592W0.31
UCECchr178504698Silentrs772149998L1168L0.38
UCECchr178518684SilentnovelI786I0.37
UCECchr178535930Missense_Mutationrs752480302A526V0.4
UCECchr178546659Missense_Mutationrs757539505A378V0.29
UCECchr178569754Missense_MutationnovelA231V0.5
UCECchr1784746183'UTRnovel0.3
UCECchr178478415Missense_Mutationrs763285249R1846C0.58
UCECchr178506431Silentrs185230215L1060L0.25
UCECchr178545548Missense_MutationnovelR434H0.31
UCECchr178478418Missense_MutationNAR1845C0.34
UCECchr178492823Missense_Mutationrs767545696R1440C0.34
UCECchr178475870SilentnovelL1955L0.52
UCECchr178478418Missense_MutationNAR1845C0.4
UCECchr178622925Missense_MutationnovelR108C0.42
UCECchr178623016Missense_MutationnovelQ77H0.52
UCECchr178492308Missense_MutationNAV1523M0.41
UCECchr178589105Missense_MutationNAR169H0.33
UCECchr178476984Missense_Mutationrs778680463A1893V0.36
UCECchr178478364Nonsense_MutationNAR1863*0.35
UCECchr178513633Nonsense_MutationNAE853*0.18
UCECchr178509839Silentrs374591741L990L0.44
UCECchr178545541Silentrs756368132L436L0.31
UCECchr178548776Missense_MutationnovelL301F0.33
UCECchr1784742563'UTRnovel0.39
UCECchr178492787Missense_MutationnovelK1452E0.4
UCECchr178506392SilentnovelE1073E0.27
UCECchr178545575Missense_MutationnovelA425V0.27
UCECchr178548323SilentnovelP373P0.25
UCECchr178508649Missense_Mutationrs780518542A1009V0.39
UCECchr1784743093'UTRnovel0.22
UCECchr1784747133'UTRnovel0.34
UCECchr178490441Missense_MutationNAR1564C0.23
UCECchr178499315Silentrs553844407G1271G0.14
UCECchr178506328Missense_Mutationrs753724964A1095T0.19
UCECchr178513662Missense_Mutationrs762239237P843L0.15
UCECchr178530661Intronnovel0.29
UCECchr178542154Missense_MutationnovelD510N0.15
UCECchr178548363Missense_MutationnovelS360Y0.24
UCECchr178553977SilentNAI256I0.29
UCECchr178508604Missense_MutationnovelN1024S0.07
UCECchr178535873Missense_MutationnovelT545I0.44
UCECchr178545532SilentnovelR439R0.31
UCECchr178480185Missense_MutationnovelS1810F0.36
UCECchr178535863SilentnovelT548T0.09
UCECchr178622947Silentrs775686660S100S0.23
UCECchr178513815Missense_MutationnovelH831Y0.15
UCECchr178506428Silentrs138732743D1061D0.21
UCECchr178577297Missense_MutationnovelV191A0.26
UCECchr178508609SilentnovelA1022A0.31
UCECchr178476984Missense_Mutationrs778680463A1893V0.43
UCECchr178512468Frame_Shift_DelnovelM948Cfs*120.46
UCECchr178545495Missense_MutationnovelA452T0.43
UCECchr178490357Missense_MutationnovelR1592W0.39
UCECchr178508654SilentnovelR1007R0.29
UCECchr178546593Missense_MutationnovelR400Q0.33
UCECchr178554006Missense_MutationnovelR247W0.07
UCECchr178492463Missense_Mutationrs755969165R1471Q0.31
UCECchr178506329Silentrs757031791G1094G0.24
UCECchr178548725Missense_MutationnovelP318S0.33
UCECchr178604884SilentnovelH148H0.38
UCECchr178478367Missense_Mutationrs780650576R1862C0.12
UCECchr178506358SilentnovelL1085L0.34
UCECchr178480482Missense_Mutationrs767265670A1739T0.48
UCECchr178545510Missense_MutationNAT447A0.36
UCECchr178475899SilentnovelL1946L0.5
UCECchr178478380Missense_MutationnovelQ1857H0.27
UCECchr178509950Splice_SitenovelX954_splice0.33
UCECchr178478389SilentNAI1854I0.43
UCECchr178487478SilentNAA1636A0.54
UCECchr178552100Missense_MutationNAR279C0.05
UCECchr178553977SilentNAI256I0.43
UCECchr178622937Missense_MutationNAN104D0.46
UCECchr178480488Missense_Mutationrs371758579R1737W0.32
UCECchr178589088Missense_MutationNAL175I0.31
UCECchr178499352Missense_Mutationrs765363104A1259V0.05
UCECchr178604937Missense_MutationnovelL131I0.17
UCECchr178476929Silentrs199937589T1911T0.31
UCECchr178480240Missense_Mutationrs373530537R1792W0.39
UCECchr178499354Silentrs373423150D1258D0.2
UCECchr178506427Missense_MutationNAG1062R0.17
UCECchr178518893SilentnovelA746A0.21
UCECchr178535486Missense_MutationnovelD589Y0.17
UCECchr178535890SilentnovelC539C0.43
UCECchr178623087Missense_Mutationrs377262737R54W0.47
UCECchr1784756433'UTRnovel0.48
UCECchr178476905Silentrs201668761R1919R0.5
UCECchr1784743793'UTRnovel0.25
UCECchr1784748413'UTRnovel0.31
UCECchr178548342Missense_MutationnovelT367I0.25
UCECchr178475821Missense_MutationNAP1972S0.28
UCECchr178476984Missense_Mutationrs778680463A1893V0.28
UCECchr178513820Missense_MutationNAL829S0.31
UCECchr178518652Missense_MutationNAC797Y0.31
UCECchr178623123Missense_MutationNAR42C0.3
UCECchr178604929Missense_MutationNAI133M0.37
UCECchr178520896Frame_Shift_DelnovelF721Sfs*110.38
UCECchr178509879Missense_MutationNAE977A0.34
UCECchr178476883Missense_Mutationrs763121137R1927W0.47
UCECchr178490410Missense_Mutationrs745726185A1574V0.47
UCECchr178499444SilentnovelG1228G0.44
UCECchr178513818Missense_MutationNAR830W0.25
UCECchr178475867Silentrs751540483S1956S0.36
UCECchr178480197Missense_MutationnovelG1806D0.27
UCECchr178492991Missense_MutationnovelL1384M0.32
UCECchr178518942Missense_MutationnovelI730T0.37
UCSchr178545582Missense_MutationnovelA423T0.4
UCSchr178604968Silentrs375038020L120L0.29

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.20830.18166
LIHCDEL0.57843.9592e-10
READDEL0.67270.077076
THCADEL0.0160.221

Survival Analysis
CancerP-value Q-value
KIRC0.0001

Kaplan-Meier Survival Analysis

STAD0.041

Kaplan-Meier Survival Analysis

SARC0.021

Kaplan-Meier Survival Analysis

MESO0.00021

Kaplan-Meier Survival Analysis

ACC0.0022

Kaplan-Meier Survival Analysis

HNSC0.026

Kaplan-Meier Survival Analysis

SKCM0.02

Kaplan-Meier Survival Analysis

PRAD0.025

Kaplan-Meier Survival Analysis

LUSC0.014

Kaplan-Meier Survival Analysis

ESCA0.023

Kaplan-Meier Survival Analysis

PAAD0.024

Kaplan-Meier Survival Analysis

BLCA0.0001

Kaplan-Meier Survival Analysis

KICH0.047

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000133026 (Gene tree)
Gene ID
4628
Gene Symbol
MYH10
Alias
NMMHCB
Full Name
myosin heavy chain 10
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
156,808 bases
Position
chr17:8,474,205-8,631,012
Accession
7568
RBP type
non-canonical RBP
Summary
This gene encodes a member of the myosin superfamily. The protein represents a conventional non-muscle myosin; it should not be confused with the unconventional myosin-10 (MYO10). Myosins are actin-dependent motor proteins with diverse functions including regulation of cytokinesis, cell motility, and cell polarity. Mutations in this gene have been associated with May-Hegglin anomaly and developmental defects in brain and heart. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2011]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000411957MYH10-204732-ENSP00000408220187 (aa)-E7ERA5
ENST00000379980MYH10-2037694XM_011523878ENSP000003693151985 (aa)XP_011522180P35580
ENST00000465458MYH10-206799--- (aa)--
ENST00000488329MYH10-210538--- (aa)--
ENST00000584124MYH10-211317--- (aa)--
ENST00000469865MYH10-207504--- (aa)--
ENST00000459986MYH10-205711--- (aa)--
ENST00000476737MYH10-209592--- (aa)--
ENST00000472728MYH10-208383--- (aa)--
ENST00000360416MYH10-2027762XM_011523875ENSP000003535902007 (aa)XP_011522177P35580
ENST00000269243MYH10-2017662XM_011523880ENSP000002692431976 (aa)XP_011522182P35580
Gene Model
Click here to download ENSG00000133026's gene model file
Pathways
Pathway IDPathway NameSource
hsa04530Tight junctionKEGG
hsa04810Regulation of actin cytoskeletonKEGG
hsa05132Salmonella infectionKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000133026Leptin9.1510000E-005-
ENSG00000133026Leptin9.4010000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000133026's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000133026MYH10100100.000ENSMUSG00000020900Myh1010099.089Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000146microfilament motor activity15845534.IDAFunction
GO:0000281mitotic cytokinesis15774463.IDAProcess
GO:0001701in utero embryonic development-IEAProcess
GO:0001725stress fiber7699007.15774463.IDAComponent
GO:0001764neuron migration-IEAProcess
GO:0001778plasma membrane repair-IEAProcess
GO:0003279cardiac septum development-IEAProcess
GO:0003779actin binding7782316.NASFunction
GO:0005515protein binding7542763.20603131.IPIFunction
GO:0005516calmodulin binding-IEAFunction
GO:0005524ATP binding15845534.IDAFunction
GO:0005524ATP binding7782316.NASFunction
GO:0005634nucleus21630459.HDAComponent
GO:0005737cytoplasm7699007.IDAComponent
GO:0005819spindle-IEAComponent
GO:0005829cytosol20603131.IMPComponent
GO:0005829cytosol-TASComponent
GO:0005844polysome20603131.IMPComponent
GO:0005903brush border-IEAComponent
GO:0005938cell cortex7699007.IDAComponent
GO:0006887exocytosis-IEAProcess
GO:0006930substrate-dependent cell migration, cell extension-IEAProcess
GO:0007097nuclear migration-IEAProcess
GO:0007155cell adhesion-IEAProcess
GO:0007411axon guidance-IEAProcess
GO:0007512adult heart development-IEAProcess
GO:0008283cell proliferation-IEAProcess
GO:0008360regulation of cell shape-IEAProcess
GO:0016459myosin complex7499478.NASComponent
GO:0016460myosin II complex24072716.IDAComponent
GO:0016887ATPase activity24072716.IMPFunction
GO:0021592fourth ventricle development-IEAProcess
GO:0021670lateral ventricle development-IEAProcess
GO:0021678third ventricle development-IEAProcess
GO:0021680cerebellar Purkinje cell layer development-IEAProcess
GO:0030027lamellipodium-IEAComponent
GO:0030048actin filament-based movement15845534.IDAProcess
GO:0030426growth cone-IEAComponent
GO:0030496midbody11029059.IDAComponent
GO:0030898actin-dependent ATPase activity15845534.IDAFunction
GO:0030898actin-dependent ATPase activity24072716.IMPFunction
GO:0031032actomyosin structure organization24072716.IMPProcess
GO:0031594neuromuscular junction-IEAComponent
GO:0032154cleavage furrow7699007.11029059.IDAComponent
GO:0035613RNA stem-loop binding20603131.IDAFunction
GO:0035904aorta development-IEAProcess
GO:0042641actomyosin24072716.IDAComponent
GO:0043025neuronal cell body-IEAComponent
GO:0043197dendritic spine-IEAComponent
GO:0043531ADP binding15845534.IDAFunction
GO:0048027mRNA 5'-UTR binding20603131.IDAFunction
GO:0050714positive regulation of protein secretion20603131.IMPProcess
GO:0050885neuromuscular process controlling balance-IEAProcess
GO:0051015actin filament binding15845534.IDAFunction
GO:0051015actin filament binding24072716.IMPFunction
GO:0055003cardiac myofibril assembly-IEAProcess
GO:0055015ventricular cardiac muscle cell development-IEAProcess
GO:0060041retina development in camera-type eye-IEAProcess
GO:0060976coronary vasculature development-IEAProcess
GO:0070062extracellular exosome23533145.HDAComponent
GO:0097513myosin II filament24072716.IDAComponent
GO:0098885modification of postsynaptic actin cytoskeleton-IEAProcess
GO:0098974postsynaptic actin cytoskeleton organization-IEAProcess
GO:0098978glutamatergic synapse-IEAComponent
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