EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
21918680Re-expression of AKAP12 inhibits progression and metastasis potential of colorectal carcinoma in vivo and in vitro.PLoS One2011Liu Wdoi: 10.1371/journal.pone.0024015
22584896The angiogenesis suppressor gene AKAP12 is under the epigenetic control of HDAC7 in endothelial cells.Angiogenesis2012 DecTurtoi Adoi: 10.1007/s10456-012-9279-8
21461577Inhibition of endothelial cell migration through the downregulation of MMP-9 by A-kinase anchoring protein 12.Mol Med Rep2011 Jan-FebLee SWdoi: 10.3892/mmr.2010.389
18554502A-kinase anchoring protein 12 regulates the completion of cytokinesis.Biochem Biophys Res Commun2008 Aug 15Choi MCdoi: 10.1016/j.bbrc.2008.05.184
17442483AKAP12 induces apoptotic cell death in human fibrosarcoma cells by regulating CDKI-cyclin D1 and caspase-3 activity.Cancer Lett2007 Aug 28Yoon DK-
20979053Down-regulation of tumor suppressor A kinase anchor protein 12 in human hepatocarcinogenesis by epigenetic mechanisms.Hepatology2010 DecGoeppert Bdoi: 10.1002/hep.23939
28698137SSeCKS/AKAP12 induces repulsion between human prostate cancer and microvessel endothelial cells through the activation of Semaphorin 3F.Biochem Biophys Res Commun2017 Sep 2Xie Wdoi: 10.1016/j.bbrc.2017.07.043
20364105Quantitative assessment of AKAP12 promoter methylation in colorectal cancer using methylation-sensitive high resolution melting: Correlation with Duke's stage.Cancer Biol Ther2010 Jun 1Liu W-
25748058Elevated AKAP12 in paclitaxel-resistant serous ovarian cancer cells is prognostic and predictive of poor survival in patients.J Proteome Res2015 Apr 3Bateman NWdoi: 10.1021/pr5012894
15258566AKAP12/Gravin is inactivated by epigenetic mechanism in human gastric carcinoma and shows growth suppressor activity.Oncogene2004 Sep 16Choi MC-
24065476AKAP12/Gravin gene expression in colorectal cancer: clinical importance and review of the literature.J BUON2013 Jul-SepYildirim M-
21115911Methylation of AKAP12{alpha} promoter in lung cancer.Anticancer Res2010 NovJo UH-
26645718Evaluation of potential regulatory function of breast cancer risk locus at 6q25.1.Carcinogenesis2016 FebSun Ydoi: 10.1093/carcin/bgv170
21310466Quantitative assessment of AKAP12 promoter methylation in human prostate cancer using methylation-sensitive high-resolution melting: correlation with Gleason score.Urology2011 AprLiu Wdoi: 10.1016/j.urology.2010.12.010
29484387Upregulation of AKAP12 with HDAC3 depletion suppresses the progression and migration of colorectal cancer.Int J Oncol2018 AprHe Pdoi: 10.3892/ijo.2018.4284
30385176A-kinase anchor protein 12 (AKAP12) inhibits cell migration in breast cancer.Exp Mol Pathol2018 DecSoh RYZdoi: 10.1016/j.yexmp.2018.10.010

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr6151350915Missense_MutationnovelD842Y0.41
ACCchr6151352267Missense_Mutationrs749174370I1292M0.45
ACCchr6151325881Intronnovel0.15
ACCchr6151351141Missense_MutationnovelS917L0.2
ACCchr6151351230Frame_Shift_DelNAT949Rfs*230.9
BLCAchr6151353596SilentnovelQ1735Q0.11
BLCAchr6151348746Missense_MutationnovelD119H0.26
BLCAchr6151352409Missense_MutationnovelQ1340E0.07
BLCAchr6151350499Missense_MutationNAG703E0.1
BLCAchr6151353063Missense_Mutationrs192628192V1558I0.24
BLCAchr6151350972Missense_MutationnovelE861Q0.14
BLCAchr6151350036Missense_MutationnovelQ549E0.52
BLCAchr6151348830Missense_Mutationrs138659689E147K0.38
BLCAchr6151349730Missense_MutationnovelL447V0.42
BLCAchr6151351091Silentrs772778007T900T0.5
BLCAchr6151352840Silentrs555709389S1483S0.5
BLCAchr6151350569Silentrs754437547D726D0.27
BLCAchr6151349388Missense_MutationnovelE333Q0.34
BLCAchr6151353214Frame_Shift_InsnovelE1608Dfs*240.08
BLCAchr6151353215SilentnovelE1608E0.03
BLCAchr6151350054Missense_MutationnovelP555S0.51
BLCAchr6151352163SilentnovelL1258L0.23
BLCAchr6151305744Splice_Regionnovel0.42
BLCAchr6151352659Missense_MutationnovelA1423E0.46
BRCAchr6151349221Missense_MutationnovelP277H0.19
BRCAchr6151350521Missense_MutationNAD710E0.11
BRCAchr6151351859SilentNAQ1156Q0.22
BRCAchr6151350204Missense_MutationNAE605K0.19
BRCAchr6151353726Missense_Mutationrs755923718L1779F0.55
BRCAchr6151350534Missense_MutationnovelD715N0.11
BRCAchr6151350304Missense_MutationnovelV638D0.07
BRCAchr6151352292Missense_MutationnovelE1301Q0.38
BRCAchr6151353087Missense_Mutationrs766494880E1566K0.19
BRCAchr6151351545Missense_MutationnovelE1052Q0.18
BRCAchr6151349125Missense_MutationNAR245H0.16
BRCAchr6151352109Missense_MutationnovelE1240K0.22
BRCAchr6151352715Frame_Shift_DelNAE1442Kfs*100.26
BRCAchr6151349190Missense_MutationNAE267Q0.12
CESCchr6151353114Missense_MutationnovelE1575Q0.2
CESCchr6151353152Missense_MutationnovelS1587R0.23
CESCchr6151352659Missense_MutationNAA1423V0.12
CESCchr6151352141SilentNAV1250V0.79
CESCchr6151350186Missense_MutationnovelD599N0.32
CESCchr6151350759Missense_MutationnovelE790Q0.35
CESCchr6151352034Missense_MutationNAP1215S0.38
CESCchr6151348887Nonsense_MutationnovelQ166*0.45
CESCchr6151352167Missense_MutationNAS1259L0.24
CESCchr6151350918Missense_Mutationrs753654154V843I0.51
COADchr6151349243Silentrs145689161P284P0.45
COADchr6151349652Missense_MutationnovelV421I0.34
COADchr6151350961Missense_MutationNAR857M0.37
COADchr6151351662Missense_MutationNAD1091N0.31
COADchr6151351476Missense_Mutationrs769872883V1029I0.46
COADchr6151351865Frame_Shift_DelNAP1160Lfs*180.22
COADchr6151349109Missense_Mutationrs552053449E240K0.5
COADchr6151348887Missense_MutationnovelQ166K0.37
COADchr6151348937SilentnovelK182K0.5
COADchr6151349446Missense_MutationnovelA352V0.12
COADchr6151350458Missense_MutationnovelK689N0.05
COADchr6151351180Missense_MutationnovelA930E0.13
COADchr6151349169Nonsense_MutationNAQ260*0.08
COADchr6151348920Missense_MutationNAK177E0.21
COADchr6151349217Nonsense_MutationnovelE276*0.25
COADchr6151350463Missense_Mutationrs752036291R691I0.31
COADchr6151349253Missense_Mutationrs764470310V288M0.7
COADchr6151352694Missense_MutationnovelA1435S0.19
COADchr6151350080Silentrs750541234G563G0.33
COADchr6151351179Missense_Mutationrs375774812A930T0.4
COADchr6151351642Nonsense_MutationNAS1084*0.35
COADchr6151351287Missense_Mutationrs140014031V966I0.2
COADchr6151349313Missense_Mutationrs759658755R308C0.33
COADchr6151349246SilentnovelT285T0.54
COADchr6151352767Frame_Shift_DelNAN1461Mfs*260.52
COADchr6151348840Missense_MutationnovelP150H0.37
COADchr6151350544Missense_MutationnovelG718E0.36
COADchr6151351865Frame_Shift_DelNAP1160Lfs*180.38
COADchr6151349445Missense_Mutationrs769926929A352T0.32
COADchr6151351708Missense_MutationnovelF1106C0.11
COADchr6151351624Missense_MutationNAE1078G0.27
COADchr6151352600Frame_Shift_DelnovelE1404Rfs*180.17
COADchr6151353425Missense_MutationNAD1678E0.4
COADchr6151348788Missense_Mutationrs200778076D133N0.1
COADchr6151350096Missense_MutationnovelS569P0.16
COADchr6151350061Missense_MutationNAS557N0.12
COADchr6151351639Missense_Mutationrs141178416A1083V0.36
COADchr6151351934Silentrs573717108D1181D0.35
COADchr6151350374SilentNAV661V0.1
COADchr6151349915Missense_MutationnovelR508S0.19
COADchr6151352123SilentNAE1244E0.24
COADchr6151349139Missense_Mutationrs149211517A250T0.39
COADchr6151350591Nonsense_MutationNAE734*0.28
COADchr6151352756SilentNAE1455E0.16
COADchr6151353099Missense_MutationNAE1570K0.3
COADchr6151353476Silentrs569287283P1695P0.26
COADchr6151352058Missense_MutationnovelA1223S0.26
COADchr6151351079SilentnovelV896V0.26
COADchr6151351865Frame_Shift_DelNAP1160Lfs*180.17
COADchr6151350885Missense_MutationNAG832R0.4
COADchr6151350295Missense_MutationnovelL635P0.29
COADchr6151352722Missense_MutationNAL1444W0.86
ESCAchr6151352403Missense_MutationnovelV1338I0.25
ESCAchr61513560103'UTRnovel0.39
ESCAchr6151352980In_Frame_InsnovelI1530delinsMD0.46
ESCAchr61513561673'UTRnovel0.55
ESCAchr6151305809SilentnovelS75S0.19
GBMchr6151353180Frame_Shift_DelnovelE1597Kfs*380.12
GBMchr6151325809Intronnovel0.36
GBMchr6151350697Missense_MutationnovelR769I0.27
GBMchr6151351365Missense_Mutationrs199808949E992K0.28
GBMchr6151351517SilentnovelV1042V0.2
HNSCchr6151350402Missense_Mutationrs771936289R671C0.11
HNSCchr6151352342Missense_MutationnovelD1317E0.21
HNSCchr6151349369Missense_MutationnovelK326N0.18
HNSCchr6151350600Missense_Mutationrs781225876P737T0.28
HNSCchr6151348751Silentrs777029366S120S0.31
HNSCchr6151325823Intronnovel0.33
HNSCchr6151352590Missense_MutationnovelL1400P0.22
HNSCchr6151350527SilentnovelQ712Q0.45
HNSCchr6151350657Missense_Mutationrs758119251V756I0.07
HNSCchr6151351108Missense_Mutationrs776331528I906T0.27
HNSCchr6151350271Missense_Mutationrs761711528S627L0.17
HNSCchr6151349241Missense_MutationnovelP284T0.29
HNSCchr6151352142Missense_MutationnovelS1251T0.26
HNSCchr6151353036Missense_MutationnovelL1549I0.59
HNSCchr6151351980Missense_MutationnovelE1197K0.16
HNSCchr6151350559Missense_Mutationrs201814292T723M0.09
HNSCchr6151351097SilentnovelA902A0.27
KICHchr6151350347SilentnovelE652E0.29
KIRCchr6151349205Frame_Shift_DelnovelK272Nfs*170.22
KIRCchr6151349324SilentNAT311T0.37
KIRCchr6151350255Missense_MutationNAR622S0.2
KIRPchr6151350524Frame_Shift_DelnovelQ712Rfs*540.36
KIRPchr6151352900Missense_MutationnovelE1503D0.3
LAMLchr6151353714Missense_Mutationrs761472870A1775T0.14
LAMLchr6151352607Missense_MutationNAV1406I0.37
LAMLchr6151348838SilentnovelI149I0.11
LGGchr6151351815Missense_Mutationrs200662204E1142K0.17
LGGchr6151353632SilentnovelQ1747Q0.08
LIHCchr6151349876Silentrs370245999G495G0.26
LIHCchr6151349850Nonsense_MutationNAK487*0.6
LUADchr6151352702SilentnovelI1437I0.49
LUADchr6151350886Missense_MutationNAG832A0.2
LUADchr6151325811Intronnovel0.2
LUADchr6151352863Missense_MutationNAT1491I0.12
LUADchr6151353275SilentNAS1628S0.15
LUADchr6151350981Missense_MutationNAQ864K0.16
LUADchr6151305752Silentrs763642797L56L0.24
LUADchr6151352075SilentNAV1228V0.23
LUADchr6151349125Missense_MutationNAR245H0.07
LUADchr6151349531SilentNAP380P0.08
LUADchr6151351782Missense_Mutationrs142987485E1131Q0.24
LUADchr6151350124Missense_Mutationrs150161531C578Y0.43
LUADchr6151350397Missense_MutationnovelP669Q0.3
LUADchr6151348778Silentrs749900365A129A0.09
LUADchr6151350274Missense_MutationnovelE628G0.09
LUADchr6151352972Missense_MutationnovelS1527R0.11
LUADchr6151352445Missense_MutationnovelH1352N0.28
LUADchr6151349027SilentNAA212A0.12
LUADchr6151353134Silentrs374182415H1581H0.18
LUADchr6151351037SilentNAK882K0.18
LUADchr6151350582Missense_MutationnovelG731S0.14
LUADchr6151350025Missense_MutationnovelG545E0.07
LUSCchr6151351286Silentrs774286589V965V0.29
LUSCchr6151352719Missense_MutationnovelT1443K0.27
LUSCchr6151305771Missense_MutationnovelS63T0.16
LUSCchr6151350389Silentrs747947110P666P0.14
LUSCchr6151351020Missense_MutationNAA877T0.13
LUSCchr6151305822Missense_MutationnovelD80Y0.25
LUSCchr6151349333Missense_MutationnovelR314S0.17
LUSCchr6151349820Missense_MutationnovelT477S0.23
LUSCchr6151305874Missense_MutationnovelQ97L0.21
LUSCchr6151348750Missense_MutationNAS120F0.32
LUSCchr6151348751Silentrs777029366S120S0.34
LUSCchr6151349031Missense_Mutationrs757336172D214N0.49
MESOchr6151349806Missense_MutationnovelS472F0.3
OVchr6151352181Missense_MutationnovelT1264S0.25
OVchr6151352153SilentNAT1254T0.49
OVchr6151348892SilentnovelA167A0.29
OVchr6151351670SilentnovelV1093V0.15
OVchr6151348736SilentNAV115V0.34
OVchr6151351853Missense_MutationnovelM1154I0.13
OVchr6151349695Missense_MutationnovelV435A0.08
OVchr6151353407SilentNAT1672T0.36
OVchr6151350274Missense_MutationnovelE628G0.09
PAADchr6151350310Missense_MutationnovelS640N0.05
PAADchr6151350882Missense_MutationnovelA831T0.16
PAADchr6151351592SilentnovelQ1067Q0.2
PAADchr6151348818Missense_MutationnovelP143T0.03
PCPGchr6151350929SilentnovelV846V0.41
PRADchr6151349433Missense_Mutationrs200318359E348K0.1
PRADchr6151350657Missense_Mutationrs758119251V756I0.26
PRADchr6151351992Missense_MutationNAA1201T0.06
PRADchr6151350569Silentrs754437547D726D0.17
PRADchr6151350403Missense_Mutationrs190920353R671H0.18
READchr6151353712Missense_MutationNAS1774F0.61
READchr6151351262Missense_Mutationrs377313534N957K0.28
READchr6151350214Missense_MutationnovelT608N0.33
READchr6151350195Frame_Shift_DelnovelR604Efs*140.3
READchr6151348743Missense_MutationnovelR118G0.12
READchr6151351339Missense_MutationNAG983V0.56
READchr6151351533Missense_MutationnovelE1048K0.4
READchr6151352235Missense_Mutationrs368517285E1282K0.47
READchr6151352387Silentrs142473808P1332P0.35
READchr6151348931SilentnovelG180G0.1
READchr6151349160Missense_Mutationrs775211883E257K0.48
READchr6151352617Missense_MutationNAK1409T0.43
SARCchr6151350804Missense_MutationnovelV805I0.21
SARCchr6151352292Missense_MutationnovelE1301K0.04
SARCchr6151351692Missense_MutationnovelA1101S0.37
SARCchr6151352767Frame_Shift_DelNAN1461Mfs*260.26
SKCMchr6151351568Silentrs201622303T1059T0.36
SKCMchr6151351742SilentNAP1117P0.36
SKCMchr6151350055Missense_Mutationrs145059917P555L0.4
SKCMchr6151350640Missense_MutationnovelP750L0.28
SKCMchr6151353229Missense_MutationnovelS1613L0.07
SKCMchr6151349813SilentNAE474E0.27
SKCMchr6151350815SilentNAK808K0.37
SKCMchr6151351245Missense_MutationNAE952K0.27
SKCMchr6151351040SilentNAE883E0.65
SKCMchr6151350217Missense_MutationNAP609L0.42
SKCMchr6151352896Missense_MutationnovelG1502E0.06
SKCMchr6151351631SilentnovelQ1080Q0.31
SKCMchr6151351901SilentnovelE1170E0.17
SKCMchr6151350516Missense_MutationNAG709R0.36
SKCMchr6151352318Frame_Shift_DelnovelE1310Rfs*30.21
SKCMchr6151352525SilentNAV1378V0.15
SKCMchr6151351442SilentnovelE1017E0.4
SKCMchr6151352263Missense_MutationnovelG1291V0.21
STADchr6151350255Missense_Mutationrs143476871R622C0.11
STADchr6151353562Missense_MutationNAT1724S0.17
STADchr6151348829Silentrs561437815I146I0.23
STADchr6151352823Missense_Mutationrs775450726D1478N0.27
STADchr6151349187Frame_Shift_DelnovelK266Rfs*120.4
STADchr6151349489Silentrs752192182H366H0.3
STADchr6151353664Missense_MutationnovelA1758V0.41
STADchr6151351230Frame_Shift_DelNAT949Rfs*230.3
STADchr6151350831Nonsense_MutationNAR814*0.1
STADchr6151353197SilentNAQ1602Q0.31
STADchr6151351237Missense_Mutationrs766910226T949M0.3
STADchr6151351864Frame_Shift_InsnovelD1161*0.38
STADchr6151351397Missense_MutationNAM1002I0.64
STADchr6151351090Missense_Mutationrs771644564T900M0.5
STADchr6151351230Frame_Shift_DelNAT949Rfs*230.17
STADchr6151350127Missense_MutationnovelL579P0.25
STADchr6151353207Missense_MutationnovelQ1606E0.36
STADchr6151349314Missense_Mutationrs141729078R308H0.14
STADchr6151353145Frame_Shift_InsnovelD1586Vfs*500.08
STADchr6151351731Missense_MutationNAQ1114K0.33
STADchr6151350218SilentNAP609P0.28
STADchr6151353148Missense_MutationNAD1586G0.32
STADchr6151349109Missense_Mutationrs552053449E240K0.21
STADchr6151352312SilentnovelE1307E0.22
STADchr6151351047Missense_Mutationrs149275104E886K0.24
STADchr6151349877Missense_Mutationrs374740675V496I0.2
STADchr6151351229SilentNAE946E0.09
STADchr6151351475SilentNAG1028G0.13
STADchr6151350312Missense_Mutationrs753094802A641T0.21
STADchr6151351229Frame_Shift_Insrs767490652T949Hfs*40.19
STADchr6151353076Missense_MutationNAV1562A0.18
STADchr6151352767Frame_Shift_DelNAN1461Mfs*260.2
STADchr6151350080Silentrs750541234G563G0.29
THCAchr6151350387Missense_MutationNAP666T0.31
THCAchr6151349224Missense_MutationnovelS278N0.07
UCECchr6151351906Missense_MutationnovelD1172G0.22
UCECchr6151350393Nonsense_MutationNAE668*0.34
UCECchr6151350839Missense_MutationNAK816N0.36
UCECchr6151353718Missense_MutationNAK1776T0.36
UCECchr6151348821Missense_Mutationrs146335151E144K0.09
UCECchr6151349944Missense_MutationNAK518T0.29
UCECchr6151353045Missense_MutationnovelN1552H0.38
UCECchr6151351423Missense_MutationNAD1011G0.3
UCECchr6151353284SilentnovelS1631S0.1
UCECchr6151351918Missense_MutationnovelP1176L0.17
UCECchr6151352806Missense_MutationnovelA1472D0.47
UCECchr6151349898SilentnovelL503L0.2
UCECchr6151305880Missense_MutationnovelE99G0.44
UCECchr6151350925Missense_MutationnovelA845V0.53
UCECchr6151349199Nonsense_MutationNAE270*0.23
UCECchr6151349566Missense_MutationNAS392Y0.33
UCECchr6151348875Missense_MutationnovelP162S0.53
UCECchr6151350311Silentrs186475520S640S0.36
UCECchr6151351120Missense_MutationnovelS910Y0.44
UCECchr6151351364Silentrs370701327T991T0.34
UCECchr6151353267Missense_MutationnovelA1626S0.39
UCECchr6151305863SilentnovelA93A0.2
UCECchr6151350638Silentrs762123639S749S0.41
UCECchr6151352839Missense_MutationnovelS1483L0.29
UCECchr6151349134Missense_MutationnovelS248I0.39
UCECchr6151349299Missense_MutationnovelG303D0.31
UCECchr6151350988Frame_Shift_DelnovelS868Afs*240.42
UCECchr6151352285SilentnovelK1298K0.57
UCECchr6151352886Missense_MutationnovelD1499N0.52
UCECchr6151353412Missense_MutationnovelS1674Y0.19
UCECchr6151353706Missense_MutationnovelR1772I0.13
UCECchr6151351656Nonsense_MutationnovelE1089*0.2
UCECchr6151352659Missense_MutationNAA1423V0.24
UCECchr6151349628Nonsense_MutationNAE413*0.34
UCECchr6151351277Silentrs573213287G962G0.19
UCECchr6151352046Nonsense_MutationNAE1219*0.36
UCECchr6151348751Silentrs777029366S120S0.3
UCECchr6151350265Missense_Mutationrs774124521R625Q0.26
UCECchr6151351959Missense_Mutationrs771722071E1190K0.1
UCECchr6151352222Silentrs756720446D1277D0.13
UCECchr6151352322Nonsense_MutationNAE1311*0.25
UCECchr6151352719Missense_Mutationrs760044084T1443M0.23
UCECchr6151353041SilentNAV1550V0.08
UCECchr6151353158Silentrs149415779D1589D0.29
UCECchr61513559893'UTRnovel0.41
UCECchr6151350926Silentrs752752017A845A0.8
UCECchr6151351992Missense_MutationNAA1201T0.07
UCECchr6151350080Silentrs750541234G563G0.17
UCECchr6151348974Missense_MutationnovelT195A0.52
UCECchr6151351800Missense_MutationnovelT1137A0.45
UCECchr6151350052Missense_MutationnovelS554Y0.5
UCECchr6151353326Missense_MutationNAE1645D0.18
UCECchr6151351237Missense_Mutationrs766910226T949M0.29
UCECchr6151350567Missense_MutationnovelD726N0.38
UCECchr6151350474Missense_MutationnovelG695W0.55
UCECchr6151351643Silentrs780939900S1084S0.35
UCECchr6151352324Missense_MutationNAE1311D0.43
UCECchr6151352471Silentrs374901951H1360H0.42
UCECchr6151348896Missense_MutationnovelD169Y0.28
UCECchr6151352936SilentnovelV1515V0.4
UCECchr6151350218SilentNAP609P0.37
UCECchr6151351705Missense_MutationnovelP1105H0.45
UCECchr6151351926Missense_Mutationrs747371302D1179N0.73
UCECchr6151351149Nonsense_MutationnovelE920*0.15
UCECchr6151351340SilentNAG983G0.35
UCECchr6151352823Missense_Mutationrs775450726D1478N0.31
UCECchr6151352766Frame_Shift_InsnovelN1461Kfs*20.48
UCECchr6151348830Missense_Mutationrs138659689E147K0.34
UCECchr6151352795Frame_Shift_InsnovelG1469Wfs*460.6
UCECchr61513562713'UTRnovel0.44
UCECchr6151353404SilentnovelG1671G0.5
UCECchr6151351809Frame_Shift_InsNAA1141Sfs*210.38
UCECchr6151349412Missense_Mutationrs561110627G341R0.36
UCECchr6151348830Missense_Mutationrs138659689E147K0.29
UCECchr6151351815Missense_Mutationrs200662204E1142K0.39
UCECchr6151352220Missense_MutationnovelD1277N0.12
UCECchr61513560293'UTRnovel0.19
UCECchr6151351211SilentnovelE940E0.41
UCECchr6151350311Silentrs186475520S640S0.39
UCECchr6151350881Silentrs202238535D830D0.39
UCECchr6151353618Missense_MutationnovelE1743K0.53
UCECchr6151350623Silentrs576942154P744P0.37
UCECchr61513563413'UTRnovel0.67
UCECchr6151351877SilentNAS1162S0.47
UCECchr6151351230Frame_Shift_DelNAT949Rfs*230.51
UCECchr6151305825Missense_MutationNAL81I0.21
UCECchr6151350012Missense_MutationNAD541Y0.23
UCECchr6151348835SilentnovelQ148Q0.27
UCECchr6151351893Missense_MutationnovelD1168Y0.38
UCECchr6151352756Missense_MutationnovelE1455D0.33
UCECchr6151325846Intronnovel0.17
UCECchr6151305785Silentrs755282610G67G0.35
UCECchr6151349824Missense_MutationnovelQ478R0.46
UCECchr6151352960SilentnovelE1523E0.37
UCECchr61513561843'UTRnovel0.09
UCECchr6151350014Silentrs367749583D541D0.36
UCECchr6151352298Missense_MutationNAA1303T0.05
UCECchr6151350185Silentrs779577166S598S0.45
UCECchr6151353278SilentNAD1629D0.44
UCECchr6151352659Missense_MutationNAA1423V0.35
UCECchr6151305752Silentrs763642797L56L0.13
UCECchr6151348884Missense_MutationNAS165A0.3
UCECchr6151350696SilentNAR769R0.46
UCECchr6151352408SilentnovelV1339V0.31
UCECchr6151349975SilentnovelL528L0.34
UCECchr6151352839Missense_MutationnovelS1483L0.37
UCECchr6151353368Silentrs200457723V1659V0.04
UCECchr6151325757Intronnovel0.64
UCECchr6151351080Missense_Mutationrs746212006A897T0.14
UCECchr6151351698Missense_MutationnovelT1103A0.39
UCECchr6151351835SilentnovelK1148K0.27
UCECchr6151348964Missense_MutationnovelE191D0.06
UCECchr6151351364Silentrs370701327T991T0.1
UCECchr6151352812Missense_MutationnovelP1474H0.64
UCECchr6151351941Missense_MutationnovelG1184C0.56
UCECchr6151350569Silentrs754437547D726D0.36
UCECchr6151350887SilentnovelG832G0.25
UCECchr6151352978SilentnovelA1529A0.37
UCECchr6151353237Nonsense_MutationnovelE1616*0.32
UCSchr6151349967Missense_MutationnovelK526Q0.41
UCSchr6151350357Nonsense_MutationnovelE656*0.28

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCADEL0.36030.00027473
KIRCDEL0.24437.439e-11
KIRPDEL0.10420.054498
LGGDEL0.14420.0054594
MESODEL0.41380.05642
PAADDEL0.3750.11274
SKCMDEL0.55591.5442e-06
THYMDEL0.14630.10691
UVMDEL0.2750.0054289

Survival Analysis
CancerP-value Q-value
KIRC0.00016

Kaplan-Meier Survival Analysis

STAD0.00091

Kaplan-Meier Survival Analysis

MESO0.0069

Kaplan-Meier Survival Analysis

ACC0.00014

Kaplan-Meier Survival Analysis

HNSC0.045

Kaplan-Meier Survival Analysis

SKCM0.0029

Kaplan-Meier Survival Analysis

PRAD0.043

Kaplan-Meier Survival Analysis

LUSC0.0066

Kaplan-Meier Survival Analysis

BLCA0.0065

Kaplan-Meier Survival Analysis

LAML0.00032

Kaplan-Meier Survival Analysis

UCEC0.001

Kaplan-Meier Survival Analysis

LGG0.00031

Kaplan-Meier Survival Analysis

THCA0.028

Kaplan-Meier Survival Analysis

LUAD0.0001

Kaplan-Meier Survival Analysis

OV0.007

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000131016 (Gene tree)
Gene ID
9590
Gene Symbol
AKAP12
Alias
AKAP250|SSeCKS
Full Name
A-kinase anchoring protein 12
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
118,561 bases
Position
chr6:151,239,999-151,358,559
Accession
370
RBP type
non-canonical RBP
Summary
The A-kinase anchor proteins (AKAPs) are a group of structurally diverse proteins, which have the common function of binding to the regulatory subunit of protein kinase A (PKA) and confining the holoenzyme to discrete locations within the cell. This gene encodes a member of the AKAP family. The encoded protein is expressed in endothelial cells, cultured fibroblasts, and osteosarcoma cells. It associates with protein kinases A and C and phosphatase, and serves as a scaffold protein in signal transduction. This protein and RII PKA colocalize at the cell periphery. This protein is a cell growth-related protein. Antibodies to this protein can be produced by patients with myasthenia gravis. Alternative splicing of this gene results in two transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000354675AKAP12-2026287-ENSP000003467021684 (aa)-Q02952
ENST00000402676AKAP12-2048432XM_017011517ENSP000003845371782 (aa)XP_016867006Q02952
ENST00000253332AKAP12-2016597-ENSP000002533321782 (aa)-Q02952
ENST00000490177AKAP12-205561--- (aa)--
ENST00000359755AKAP12-2036190XM_005267235ENSP000003527941677 (aa)XP_005267292Q02952
Gene Model
Click here to download ENSG00000131016's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000131016Abdominal Fat9.05760492161663E-617903300
ENSG00000131016Waist-Hip Ratio2.5530000E-005-
ENSG00000131016Platelet Function Tests6.4900000E-006-
ENSG00000131016Platelet Function Tests1.8772000E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000131016rs69297156151247738?Alzheimer's disease progression score29860282[NR] unit decrease0.05EFO_0006514
ENSG00000131016rs121758636151262834?Peripheral arterial disease (traffic-related air pollution interaction)27082954[20.79-25.77]23.28EFO_0004265|EFO_0007908
ENSG00000131016rs2006622046151351815GHeel bone mineral density30598549[0.15-0.3] unit decrease0.225037EFO_0009270
ENSG00000131016rs77737816151240978GMale-pattern baldness30573740[0.012-0.026] unit decrease0.0193578EFO_0007825
ENSG00000131016rs48697236151258297TBlond vs. brown/black hair color30531825NR1.058EFO_0003924
ENSG00000131016rs93970406151259630ABrown vs. black hair color30531825NR1.079EFO_0003924
ENSG00000131016rs104348956151256604?Hair color30595370EFO_0007822
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000131016's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005515protein binding20029029.IPIFunction
GO:0005737cytoplasm10858453.TASComponent
GO:0005829cytosol-IDAComponent
GO:0005856cytoskeleton-IEAComponent
GO:0005886plasma membrane-IDAComponent
GO:0005925focal adhesion21423176.HDAComponent
GO:0005938cell cortex-IEAComponent
GO:0006605protein targeting-IEAProcess
GO:0007186G protein-coupled receptor signaling pathway10858453.TASProcess
GO:0007193adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway17081159.IMPProcess
GO:0008179adenylate cyclase binding17081159.IPIFunction
GO:0010738regulation of protein kinase A signaling17081159.IMPProcess
GO:0010739positive regulation of protein kinase A signaling-IEAProcess
GO:0050804modulation of chemical synaptic transmission-IEAProcess
GO:0051018protein kinase A binding-IEAFunction
GO:0090036regulation of protein kinase C signaling-IEAProcess
GO:0098685Schaffer collateral - CA1 synapse-IEAComponent
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