EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
28483517MicroRNA-1301 suppresses tumor cell migration and invasion by targeting the p53/UBE4B pathway in multiple human cancer cells.Cancer Lett2017 Aug 10Wang Bdoi: 10.1016/j.canlet.2017.04.038
12700669Screening for gene mutations in a 500 kb neuroblastoma tumor suppressor candidate region in chromosome 1p; mutation and stage-specific expression in UBE4B/UFD2.Oncogene2003 Apr 17Krona C-
24587254Regulation of p53 level by UBE4B in breast cancer.PLoS One2014 Feb 26Zhang Ydoi: 10.1371/journal.pone.0090154

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr110130727Missense_MutationnovelE609K0.39
ACCchr110137106Missense_MutationnovelT755M0.86
BLCAchr110033682SilentnovelL4L0.18
BLCAchr110151485SilentnovelQ950Q0.28
BLCAchr1100336215'UTRnovel0.28
BLCAchr110151396Missense_MutationNAN921D0.12
BLCAchr110171032Intronnovel0.39
BLCAchr110101167Missense_Mutationrs760809804R136Q0.41
BLCAchr110106233SilentnovelF282F0.44
BLCAchr110171251Missense_MutationnovelK1149N0.42
BLCAchr110106455Silentrs758645417L356L0.23
BLCAchr110137071Silentrs371708780G743G0.18
BLCAchr110072073Nonsense_MutationNAQ24*0.19
BLCAchr110171308SilentnovelA1168A0.28
BLCAchr110119583Missense_MutationnovelL470S0.24
BLCAchr110130559SilentnovelL585L0.34
BLCAchr110106490Missense_MutationNAS368F0.16
BLCAchr110179432SilentNAT1239T0.16
BLCAchr110147073SilentnovelL858L0.31
BLCAchr110106200SilentNAL271L0.64
BLCAchr110135020Missense_MutationNAF686L0.18
BLCAchr110171123Intronnovel0.39
BLCAchr110158368Missense_MutationnovelT980I0.38
BRCAchr110106378Missense_Mutationrs372819662R331C0.09
BRCAchr110103081Missense_MutationNAN190S0.35
BRCAchr110130568Silentrs777413135L588L0.36
BRCAchr110106200SilentNAL271L0.23
BRCAchr1100336475'UTRnovel0.09
BRCAchr110171306Missense_MutationNAA1168T0.28
BRCAchr110117583Frame_Shift_InsNAA444Sfs*520.29
BRCAchr110101167Missense_Mutationrs760809804R136Q0.17
BRCAchr110145019Missense_Mutationrs750897247R815C0.67
BRCAchr110102973Missense_MutationNAS154C0.6
BRCAchr110137175Missense_Mutationrs781407095R778H0.26
BRCAchr110103011Missense_MutationNAR167S0.42
BRCAchr110161149Missense_MutationNAK1021E0.21
BRCAchr110126862Silentrs762850040F541F0.29
CESCchr110103030Missense_MutationNAR173Q0.26
CESCchr1101808703'UTRnovel0.29
CESCchr110135106Missense_Mutationrs752526141R715T0.28
CESCchr110158375Frame_Shift_InsnovelT983Nfs*30.08
CESCchr110158377Missense_MutationnovelT983S0.08
CESCchr110137071Silentrs371708780G743G0.45
CESCchr110132460Missense_MutationnovelN668I0.44
CESCchr110137163Missense_Mutationrs546373910R774H0.44
CESCchr110171272Silentrs142901446T1156T0.15
CESCchr1101803173'UTRnovel0.56
CESCchr1100335325'Flanknovel0.25
CESCchr110105523Silentrs145640349S196S0.33
CESCchr110137143SilentnovelL767L0.28
CHOLchr110137166Missense_MutationnovelR775P0.2
CHOLchr110144976Nonsense_MutationnovelW800*0.65
CHOLchr1101808023'UTRnovel0.4
COADchr110151561Missense_MutationNAD976N0.4
COADchr110103089Nonsense_MutationNAE193*0.38
COADchr110130514SilentNAR570R0.07
COADchr110106531Missense_Mutationrs548707778A382T0.4
COADchr110137175Missense_Mutationrs781407095R778H0.21
COADchr110103094Splice_SiteNAX194_splice0.33
COADchr110171178Missense_MutationNAL1125H0.6
COADchr110171246Missense_MutationNAP1148S0.3
COADchr110132410SilentNAG651G0.33
COADchr110146972Missense_MutationnovelR825W0.37
COADchr110168178Missense_MutationnovelR1081C0.22
COADchr110072034Missense_Mutationrs761955109R11W0.37
COADchr110137205Missense_MutationNAR788I0.46
COADchr110106374SilentNAR329R0.34
COADchr110171152Frame_Shift_InsNAL1117Ffs*80.36
COADchr110178690Missense_MutationnovelR1191Q0.2
COADchr110179536Missense_Mutationrs758014435T1274M0.41
COADchr110137165Missense_MutationNAR775C0.1
COADchr110161163SilentnovelR1025R0.09
COADchr110132449SilentNAV664V0.2
COADchr110119510Splice_Regionnovel0.39
COADchr110117555Silentrs749053336I431I0.18
COADchr110161220SilentNAS1044S0.16
COADchr110149269Frame_Shift_DelNAF894Lfs*190.23
COADchr110105631SilentNAI232I0.34
COADchr110105734Missense_MutationNAS267P0.37
COADchr110147066Missense_Mutationrs148514322R856H0.36
COADchr110149282Splice_RegionnovelQ897delinsHQTTR0.1
COADchr110151491Missense_MutationNAF952L0.29
COADchr110130513Missense_Mutationrs541907403R570Q0.22
ESCAchr110158429Missense_MutationnovelF1000L0.06
ESCAchr110072050Missense_MutationnovelR16P0.14
ESCAchr110171204Missense_Mutationrs1801442R1134C0.35
GBMchr110171108Intronnovel0.15
GBMchr110161227Nonsense_MutationNAR1047*0.28
GBMchr110132385Missense_MutationnovelI643N0.15
GBMchr110178808SilentnovelD1230D0.31
GBMchr110132410SilentNAG651G0.23
GBMchr110106497SilentnovelQ370Q0.5
GBMchr110137158Missense_MutationnovelS772R0.38
GBMchr110161233Missense_MutationnovelH1049N0.47
GBMchr110179494Missense_MutationnovelR1260Q0.15
GBMchr110179476Missense_MutationnovelD1254G0.08
GBMchr1101799613'UTRnovel0.12
HNSCchr110171266SilentnovelQ1154Q0.23
HNSCchr110134991Missense_MutationnovelD677H0.07
HNSCchr110072166Missense_MutationnovelL55V0.12
HNSCchr110151460Missense_MutationnovelN942I0.13
HNSCchr110072099SilentnovelP32P0.29
HNSCchr1100335875'Flanknovel0.2
HNSCchr110179935SilentNAE1296E0.16
HNSCchr110149228Missense_Mutationrs770338844A879V0.14
HNSCchr110147019Silentrs546274495L840L0.13
HNSCchr110106389SilentnovelT334T0.23
KIRCchr110161284Missense_Mutationrs371058351R1066W0.09
KIRCchr1101799733'UTRrs7787336070.43
KIRCchr110178698In_Frame_DelnovelG1194del0.31
KIRCchr110103003Missense_MutationNAK164T0.19
KIRCchr110102968Missense_MutationNAE152D0.24
KIRCchr110106499Missense_Mutationrs375249164R371K0.28
KIRPchr110117582Missense_MutationnovelE440D0.44
KIRPchr110117568SilentNAR436R0.1
LAMLchr110171169Missense_MutationnovelN1122T0.25
LGGchr110122021Missense_MutationNAG500D0.15
LIHCchr110130590Missense_MutationnovelS596C0.25
LIHCchr110151366Missense_MutationnovelI911V0.87
LIHCchr110161174Missense_MutationNAM1029T0.4
LIHCchr110135147Missense_MutationnovelA729P0.44
LIHCchr110137147Missense_Mutationrs761724316I769V0.45
LUADchr110137083SilentNAP747P0.42
LUADchr1101800013'UTRrs7759303520.11
LUADchr110179542Frame_Shift_DelnovelE1277Cfs*80.37
LUADchr110178714Missense_MutationNAI1199T0.26
LUADchr110130798Splice_SitenovelX632_splice0.2
LUADchr110171113Intronnovel0.19
LUADchr110106524SilentNAL379L0.1
LUADchr110178697SilentNAA1193A0.43
LUADchr110151500Missense_MutationnovelM955I0.23
LUADchr1100336395'UTRnovel0.7
LUADchr110072181Missense_Mutationrs376582075M60V0.15
LUADchr110171052Intronnovel0.45
LUADchr110149226SilentNAA878A0.2
LUADchr110137178Missense_MutationNAR779T0.17
LUADchr110168199Missense_MutationNAA1088S0.11
LUADchr110151538Missense_MutationNAP968L0.22
LUADchr110147008Nonsense_MutationNAE837*0.27
LUADchr110135065Missense_MutationnovelI701M0.22
LUADchr110147054Missense_MutationNAQ852L0.27
LUADchr110171081Intronnovel0.71
LUADchr110095567Missense_MutationNAM106I0.34
LUADchr110178779Missense_MutationNAA1221S0.08
LUADchr110095551Nonsense_MutationnovelS101*0.38
LUADchr110137118Missense_MutationNAF759C0.08
LUSCchr110095495SilentnovelV82V0.38
LUSCchr110171037Intronnovel0.3
LUSCchr110106324Missense_MutationnovelH313Y0.27
LUSCchr110105533Missense_MutationnovelD200Y0.25
LUSCchr110179530Missense_MutationnovelR1272L0.24
LUSCchr110119590Silentrs778728074L472L0.47
LUSCchr1101800433'UTRnovel0.18
LUSCchr110106219Missense_MutationnovelP278A0.15
LUSCchr110072168SilentnovelL55L0.18
LUSCchr110168268Missense_MutationnovelP1111A0.35
LUSCchr110130751Missense_Mutationrs374640200I617V0.1
LUSCchr110179905SilentnovelL1286L0.42
LUSCchr110168189SilentnovelR1084R0.21
OVchr110178719Missense_MutationnovelI1201L0.18
OVchr1100336435'UTRnovel0.25
OVchr110137120Missense_MutationnovelL760F0.1
OVchr1101799833'UTRnovel0.1
OVchr110151502Missense_MutationnovelI956T0.06
OVchr110126833Frame_Shift_DelnovelK532Rfs*70.22
OVchr110103000Missense_MutationnovelC163S0.06
OVchr110178700SilentNAG1194G0.56
OVchr1101799603'UTRrs7512111140.2
OVchr1101800053'UTRnovel0.17
PAADchr110144992Missense_MutationnovelA806T0.08
PAADchr110179479Missense_Mutationrs767677267R1255H0.11
PAADchr1101800983'UTRnovel0.27
PRADchr110171272Silentrs142901446T1156T0.26
PRADchr110171308SilentnovelA1168A0.3
READchr110171150Nonsense_MutationNAR1116*0.44
READchr110072206Missense_MutationNAG68D0.18
READchr110072132Silentrs774747080A43A0.24
READchr110168166Frame_Shift_InsnovelQ1078Lfs*450.43
READchr110101167Missense_Mutationrs760809804R136Q0.41
READchr110117564Silentrs762901445F434F0.42
READchr110171090Intronnovel0.36
READchr110105526Missense_MutationNAD197E0.31
READchr110161189Missense_MutationNAT1034M0.43
SKCMchr110126843Missense_MutationNAS535F0.5
SKCMchr110168202SilentNAL1089L0.23
SKCMchr110106274Missense_MutationNAP296L0.42
SKCMchr110135032SilentNAF690F0.43
SKCMchr110095516SilentNAP89P0.06
SKCMchr110121983SilentnovelF487F0.06
SKCMchr110168169Nonsense_MutationNAQ1078*0.23
SKCMchr110171305Silentrs757111718F1167F0.3
SKCMchr110130531Missense_Mutationrs755327612S576F0.68
SKCMchr110144937Splice_Regionnovel0.23
SKCMchr110179522SilentnovelP1269P0.47
SKCMchr110171185Silentrs147245303Q1127Q0.18
SKCMchr110122045Missense_MutationNAT508I0.34
SKCMchr110171247Missense_MutationnovelP1148L0.51
SKCMchr110179953Missense_MutationNAH1302Q0.26
SKCMchr110137081Missense_MutationNAP747S0.25
SKCMchr110137082Missense_MutationnovelP747L0.25
SKCMchr110106444Missense_MutationNAP353S0.43
SKCMchr110101166Nonsense_MutationNAR136*0.37
SKCMchr110171023Intronnovel0.21
SKCMchr110168202SilentNAL1089L0.32
SKCMchr110135099Missense_MutationNAH713Y0.71
SKCMchr110119510Splice_Regionnovel0.57
SKCMchr110168198Silentrs758182185L1087L0.23
SKCMchr110146973Missense_Mutationrs761228558R825Q0.35
SKCMchr110151541Missense_MutationNAS969F0.96
SKCMchr110135015Missense_MutationnovelG685R0.47
SKCMchr110144986Missense_Mutationrs775692397P804S0.09
SKCMchr110106259Missense_Mutationrs199643842P291L0.17
SKCMchr110168249SilentnovelV1104V0.38
SKCMchr110158423SilentNAT998T0.93
SKCMchr110106308SilentNAS307S0.36
SKCMchr110106502Missense_MutationnovelP372L0.51
SKCMchr110101182Missense_Mutationrs374692148S141N0.42
SKCMchr110161212SilentnovelL1042L0.39
SKCMchr1101799673'UTRrs3741513750.08
STADchr110095534SilentNAT95T0.25
STADchr110130761Frame_Shift_DelnovelN621Tfs*130.29
STADchr110147007Silentrs765004153D836D0.3
STADchr110095533Missense_Mutationrs749630439T95M0.23
STADchr110151340Missense_Mutationrs200375353A902V0.2
STADchr1101799653'UTRrs7644840000.39
STADchr110130525Missense_Mutationrs754119546P574L0.29
STADchr110106407Silentrs762532676A340A0.3
STADchr110117584Frame_Shift_Delrs758215455A444Hfs*140.45
STADchr110106456Missense_Mutationrs772803836A357T0.1
STADchr110119555Missense_Mutationrs751961761R461C0.2
STADchr110102956SilentNAS148S0.3
STADchr1101800183'UTRnovel0.35
STADchr110137162Missense_Mutationrs765404233R774C0.24
STADchr110179419Missense_MutationnovelP1235H0.15
STADchr110147007Silentrs765004153D836D0.48
STADchr110171151Missense_MutationNAR1116Q0.27
STADchr110132447Missense_MutationnovelV664I0.12
STADchr110135137Silentrs146689339T725T0.44
STADchr110095525Missense_MutationnovelS92R0.3
STADchr110122035SilentnovelL505L0.54
STADchr110171246Missense_MutationNAP1148A0.43
STADchr110178735Missense_MutationNAL1206R0.09
STADchr1101799663'UTRnovel0.44
STADchr110179426Missense_MutationNAM1237I0.4
STADchr110171223Missense_MutationNAN1140T0.29
STADchr110151558Missense_MutationNAT975A0.11
STADchr110072034Missense_Mutationrs761955109R11W0.26
STADchr110072131Missense_MutationNAA43V0.17
STADchr110168189SilentnovelR1084R0.16
STADchr110106455Silentrs758645417L356L0.28
STADchr110095513SilentNAS88S0.35
STADchr110137175Missense_Mutationrs781407095R778H0.09
THCAchr110149282Splice_RegionnovelQ897delinsHQTTR0.08
UCECchr110101175Missense_MutationNAK139Q0.31
UCECchr110145007Missense_MutationNAE811K0.38
UCECchr110171150Nonsense_MutationNAR1116*0.08
UCECchr1101807943'UTRnovel0.24
UCECchr110161174In_Frame_InsnovelL1030_T1035dup0.19
UCECchr110106280Missense_Mutationrs772153110R298H0.48
UCECchr110106391Missense_MutationNAV335A0.23
UCECchr1101811163'UTRnovel0.5
UCECchr110117556Missense_MutationnovelE432K0.18
UCECchr110121992Silentrs768817664P490P0.33
UCECchr110102956SilentNAS148S0.08
UCECchr110178796Silentrs753144500S1226S0.3
UCECchr1101804023'UTRnovel0.17
UCECchr110132445Missense_Mutationrs766800561A663V0.39
UCECchr110171028Intronnovel0.23
UCECchr110129404Missense_MutationNAL551F0.23
UCECchr110146997Missense_MutationNAG833D0.26
UCECchr110178688Missense_MutationnovelM1190I0.08
UCECchr110103089Nonsense_MutationNAE193*0.28
UCECchr110144970Missense_MutationNAS798R0.2
UCECchr110130513Missense_Mutationrs541907403R570Q0.19
UCECchr110151485Missense_MutationnovelQ950H0.17
UCECchr110130807Silentrs141707832L635L0.4
UCECchr110158406Missense_MutationnovelR993C0.46
UCECchr1101808023'UTRnovel0.41
UCECchr110106405Missense_MutationnovelA340T0.26
UCECchr110072031Nonsense_MutationnovelR10*0.48
UCECchr110101166Nonsense_MutationNAR136*0.11
UCECchr1101806813'UTRnovel0.42
UCECchr110130769Missense_Mutationrs777007475R623C0.47
UCECchr110132475Missense_MutationnovelQ673R0.36
UCECchr110130551Missense_MutationNAR583W0.21
UCECchr110101179Missense_Mutationrs759485063R140Q0.29
UCECchr110179515Missense_Mutationrs766812302T1267M0.23
UCECchr110137071Silentrs371708780G743G0.21
UCECchr110171205Missense_Mutationrs201844344R1134H0.35
UCECchr1101800003'UTRrs5490451050.25
UCECchr110117584Frame_Shift_Delrs758215455A444Hfs*140.4
UCECchr1101809223'UTRnovel0.47
UCECchr110095534SilentNAT95T0.49
UCECchr110137113Nonsense_MutationnovelC757*0.41
UCECchr1101805473'UTRnovel0.39
UCECchr1101806483'UTRnovel0.37
UCECchr1101808023'UTRnovel0.41
UCECchr110103016SilentnovelV168V0.3
UCECchr110130605Missense_MutationNAA601T0.43
UCECchr1101800983'UTRnovel0.2
UCECchr110151341SilentnovelA902A0.35
UCECchr110149274SilentnovelF894F0.21
UCECchr110178797Missense_MutationnovelD1227N0.35
UCECchr1101805483'UTRnovel0.17
UCECchr110106469Missense_MutationnovelQ361R0.35
UCECchr110106379Missense_Mutationrs180983516R331H0.41
UCECchr110161186Missense_MutationnovelD1033G0.12
UCECchr110171251Missense_MutationnovelK1149N0.18
UCECchr1101810803'UTRnovel0.27
UCECchr110106557SilentnovelR390R0.2
UCECchr110135089Silentrs776093046T709T0.19
UCECchr110151429Missense_MutationnovelA932T0.07
UCECchr110179947Silentrs140883136S1300S0.08
UCECchr110179519Frame_Shift_DelnovelF1270Sfs*60.32
UCECchr110147037Missense_MutationNAF846L0.4
UCECchr110130744SilentNAG614G0.38
UCECchr110171305Silentrs757111718F1167F0.09
UCECchr110102975Missense_MutationnovelE155K0.13
UCECchr110106383SilentNAP332P0.38
UCECchr1101803233'UTRnovel0.46
UCECchr1101810593'UTRnovel0.36
UCECchr110095534SilentNAT95T0.34
UCECchr110179490Missense_MutationnovelL1259M0.34
UCECchr1101801493'UTRnovel0.23
UCECchr110105601SilentnovelF222F0.48
UCECchr110106309Missense_MutationnovelT308A0.39
UCECchr110105732Missense_MutationnovelS266I0.1
UCECchr110146966Missense_MutationnovelL823M0.29
UCECchr110171313Missense_MutationnovelA1170D0.45
UCECchr110105679Silentrs201265548G248G0.31
UCECchr110121980SilentnovelS486S0.36

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
CESCDEL0.10510.00029523
CHOLDEL0.80563.3987e-23
DLBCDEL0.10420.011841
HNSCDEL0.13797.0766e-07
KIRCDEL0.14582.3538e-09
KIRPDEL0.17361.462e-09
LUADDEL0.14150.0024765
LUSCDEL0.35732.5882e-07
MESODEL0.34482.434e-07
READDEL0.38792.1758e-10
TGCTDEL0.180.00046313
UCSDEL0.30360.0051125

Survival Analysis
CancerP-value Q-value
KIRC0.0001

Kaplan-Meier Survival Analysis

SARC0.0005

Kaplan-Meier Survival Analysis

ACC0.0045

Kaplan-Meier Survival Analysis

SKCM0.027

Kaplan-Meier Survival Analysis

BRCA0.039

Kaplan-Meier Survival Analysis

CESC0.047

Kaplan-Meier Survival Analysis

KICH0.049

Kaplan-Meier Survival Analysis

LIHC0.0054

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000130939 (Gene tree)
Gene ID
10277
Gene Symbol
UBE4B
Alias
UBOX3|E4|UFD2|KIAA0684
Full Name
ubiquitination factor E4B
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
148,408 bases
Position
chr1:10,032,832-10,181,239
Accession
12500
RBP type
non-canonical RBP
Summary
The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, and ubiquitin-protein ligases, or E3s. This gene encodes an additional conjugation factor, E4, which is involved in multiubiquitin chain assembly. This gene is also the strongest candidate in the neuroblastoma tumor suppressor genes. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000253251UBE4B-2014772XM_017000036ENSP000002532511173 (aa)XP_016855525O95155
ENST00000462658UBE4B-204573--- (aa)--
ENST00000377153UBE4B-2031273-ENSP00000366358100 (aa)-B1AQ61
ENST00000488228UBE4B-210560-ENSP0000046817898 (aa)-K7ERA7
ENST00000487244UBE4B-209818--- (aa)--
ENST00000466379UBE4B-2062299--- (aa)--
ENST00000343090UBE4B-2025267XM_005263422ENSP000003430011302 (aa)XP_005263479O95155
ENST00000465408UBE4B-205355--- (aa)--
ENST00000470736UBE4B-207827-ENSP00000467258276 (aa)-K7EP75
ENST00000475795UBE4B-208871--- (aa)--
Gene Model
Click here to download ENSG00000130939's gene model file
Pathways
Pathway IDPathway NameSource
hsa04120Ubiquitin mediated proteolysisKEGG
hsa04141Protein processing in endoplasmic reticulumKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000130939Coronary Artery Disease1.1790000E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000130939rs187585530110107367AAtrial fibrillation29892015[1.36-1.77]1.55EFO_0000275
ENSG00000130939rs187585530110107367AAtrial fibrillation29892015[1.36-1.77]1.55EFO_0000275
ENSG00000130939rs12144133110144128?White blood cell count30595370EFO_0004308
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000130939's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000151ubiquitin ligase complex11802788.TASComponent
GO:0000209protein polyubiquitination21873635.IBAProcess
GO:0003222ventricular trabecula myocardium morphogenesis-IEAProcess
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm-ISSComponent
GO:0006511ubiquitin-dependent protein catabolic process11802788.TASProcess
GO:0006513protein monoubiquitination-IEAProcess
GO:0008626granzyme-mediated apoptotic signaling pathway11802788.IDAProcess
GO:0009411response to UV11802788.IDAProcess
GO:0019899enzyme binding-ISSFunction
GO:0030433ubiquitin-dependent ERAD pathway21873635.IBAProcess
GO:0031175neuron projection development-IEAProcess
GO:0034450ubiquitin-ubiquitin ligase activity21873635.IBAFunction
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process23509263.IDAProcess
GO:0051117ATPase binding-IEAFunction
GO:0051865protein autoubiquitination-IEAProcess
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