EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr9130695554Missense_Mutationrs748977410R62T0.3ECR1_N
BLCAchr91307038483'UTRnovel0.1
BLCAchr9130693820Missense_MutationNAA10V0.26
BRCAchr9130702087Intronnovel0.2
BRCAchr9130695491Splice_SiteNAX42_splice0.27
CESCchr9130699363Missense_MutationnovelR132T0.4
CESCchr91306937795'UTRnovel0.17
COADchr9130693849Missense_Mutationrs140638723R20S0.37
COADchr9130695492Splice_RegionNAR41R0.3
ESCAchr9130697589Missense_MutationnovelG78S0.58
GBMchr9130702199Missense_MutationnovelH187Q0.33
HNSCchr91307038693'UTRnovel0.37
HNSCchr9130698179Nonsense_MutationnovelW96*0.3
HNSCchr9130693896SilentnovelT35T0.51
HNSCchr91307038823'UTRnovel0.15
HNSCchr91307038843'UTRnovel0.08
KIRPchr9130703767Frame_Shift_DelnovelE292Gfs*570.49
LUADchr9130698175Missense_MutationnovelR95M0.29
LUADchr9130702183Missense_MutationnovelQ182L0.27
LUADchr9130693914Splice_SitenovelX41_splice0.32
LUSCchr9130702286Frame_Shift_InsnovelF219Lfs*120.35
LUSCchr9130702136Splice_RegionnovelL166L0.49
LUSCchr9130695489Splice_Regionnovel0.1
OVchr9130703076Missense_MutationNAE232D0.17
OVchr91307039463'UTRnovel0.33
OVchr9130695584Nonsense_MutationnovelL72*0.04
OVchr9130701930Intronnovel0.33
READchr9130693839Missense_MutationnovelE16D0.36
READchr9130703092Missense_Mutationrs561877923R238W0.51
SARCchr9130701062Intronnovel0.33
SKCMchr91306937795'UTRnovel0.19
SKCMchr9130700914SilentNAT158T0.3
SKCMchr9130703071Nonsense_Mutationrs149299789R231*0.15
SKCMchr9130703122SilentnovelR248R0.3
STADchr9130702162Missense_MutationNAS175F0.19
THCAchr91307039293'UTRnovel0.15
THCAchr91307039313'UTRnovel0.15
UCECchr9130702250Nonsense_MutationnovelW204*0.2
UCECchr9130693878Frame_Shift_DelNAD31Ifs*330.49ECR1_N
UCECchr9130693843SilentnovelL18L0.33
UCECchr9130699339Missense_MutationnovelS124Y0.34
UCECchr9130698168Nonsense_MutationNAQ93*0.4
UCECchr9130700872Silentrs112276515E144E0.31
UCECchr9130701972Intronnovel0.5
UCECchr91307038623'UTRnovel0.41
UCECchr9130693885Missense_MutationnovelT32A0.16ECR1_N
UCECchr9130702070Intronnovel0.47
UCECchr9130697606SilentnovelI83I0.42
UCECchr91307037933'UTRrs2015008230.46
UCECchr9130703700Missense_MutationNAD270N0.43
UCECchr9130702288Missense_MutationnovelG217E0.21
UCECchr91307039373'UTRnovel0.2
UCECchr9130700874Missense_MutationnovelV145A0.28
UCECchr9130702240Missense_MutationnovelG201D0.44
UCECchr91307039163'UTRnovel0.24
UCECchr9130700930Missense_MutationnovelG164R0.35

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BRCADEL0.20560.070727
LAMLDEL0.01050.24147
LGGAMP0.06040.21332
LIHCDEL0.24590.12467
OVDEL0.54922.9521e-06
THCADEL0.04010.24038
THYMDEL0.01630.022012
UCECDEL0.21890.0022334
UCSDEL0.60710.089783

Survival Analysis
CancerP-value Q-value
KIRC0.02

Kaplan-Meier Survival Analysis

STAD0.039

Kaplan-Meier Survival Analysis

SARC0.047

Kaplan-Meier Survival Analysis

ACC0.00011

Kaplan-Meier Survival Analysis

HNSC0.046

Kaplan-Meier Survival Analysis

SKCM0.049

Kaplan-Meier Survival Analysis

PRAD0.012

Kaplan-Meier Survival Analysis

KIRP0.0029

Kaplan-Meier Survival Analysis

COAD0.039

Kaplan-Meier Survival Analysis

PAAD0.022

Kaplan-Meier Survival Analysis

LIHC0.00032

Kaplan-Meier Survival Analysis

LGG0.00028

Kaplan-Meier Survival Analysis

LUAD0.013

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000130713 (Gene tree)
Gene ID
23404
Gene Symbol
EXOSC2
Alias
hRrp4p|Rrp4p|RRP4|p7
Full Name
exosome component 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
11,174 bases
Position
chr9:130,693,721-130,704,894
Accession
17097
RBP type
canonical RBP
Summary
(Exosome Component 2) is a Protein Coding gene. Diseases associated with EXOSC2 include Short Stature, Hearing Loss, Retinitis Pigmentosa, And Distinctive Facies and Late-Onset Retinal Degeneration. Among its related pathways are PERK regulates gene expression and Deadenylation-dependent mRNA decay. Gene Ontology (GO) annotations related to this gene include RNA binding and exoribonuclease activity. An important paralog of this gene is EXOSC3.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000361425ECR1_NPF14382.67.4e-1511
ENSP00000418463ECR1_NPF14382.69.6e-1511
ENSP00000361426ECR1_NPF14382.61.2e-1411
ENSP00000444917ECR1_NPF14382.61.2e-1411
ENSP00000361427ECR1_NPF14382.61.3e-1411
ENSP00000361433ECR1_NPF14382.61.3e-1411
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
118098815' exonuclease containing S1 and KH RNA-binding domains.'>Arabidopsis thaliana exosome subunit AtRrp4p is a hydrolytic 3'-->5' exonuclease containing S1 and KH RNA-binding domains.Nucleic Acids Res2002 Feb 1Chekanova JA-
23324612The archaeal DnaG protein needs Csl4 for binding to the exosome and enhances its interaction with adenine-rich RNAs.RNA Biol2013 MarHou Ldoi: 10.4161/rna.23450
17380186RNA channelling by the archaeal exosome.EMBO Rep2007 MayLorentzen E-
29159940Nop5 interacts with the archaeal RNA exosome.FEBS Lett2017 DecGauernack ASdoi: 10.1002/1873-3468.12915
12947419An exosome-like complex in Sulfolobus solfataricus.EMBO Rep2003 SepEvguenieva-Hackenberg E-
22503705Heterogeneous complexes of the RNA exosome in Sulfolobus solfataricus.Biochimie2012 JulWitharana Cdoi: 10.1016/j.biochi.2012.03.026
21713675The archaeal exosome.Adv Exp Med Biol2011Evguenieva-Hackenberg Edoi: 10.1007/978-1-4419-7841-7_3.
21618872The archaeal exosome.Adv Exp Med Biol2010Evguenieva-Hackenberg E-
20488184The evolutionarily conserved subunits Rrp4 and Csl4 confer different substrate specificities to the archaeal exosome.FEBS Lett2010 Jul 2Roppelt Vdoi: 10.1016/j.febslet.2010.05.014
25326320Archaeal DnaG contains a conserved N-terminal RNA-binding domain and enables tailing of rRNA by the exosome.Nucleic Acids Res2014 Nov 10Hou Ldoi: 10.1093/nar/gku969
24789718Structure and function of the archaeal exosome.Wiley Interdiscip Rev RNA2014 Sep-OctEvguenieva-Hackenberg Edoi: 10.1002/wrna.1234
28288106The Rrp4-exosome complex recruits and channels substrate RNA by a unique mechanism.Nat Chem Biol2017 MayCvetkovic MAdoi: 10.1038/nchembio.2328
17159918Structural and biochemical characterization of the yeast exosome component Rrp40.EMBO Rep2007 JanOddone A-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000430138EXOSC2-2052533--- (aa)--
ENST00000495699EXOSC2-210709-ENSP00000418463237 (aa)-A3KFL5
ENST00000463488EXOSC2-206699--- (aa)--
ENST00000546165EXOSC2-2111956-ENSP00000444917267 (aa)-Q13868
ENST00000372352EXOSC2-2031957-ENSP00000361427285 (aa)-A3KFL2
ENST00000372351EXOSC2-2021885XM_006717023ENSP00000361426263 (aa)XP_006717086Q13868
ENST00000372350EXOSC2-201606-ENSP00000361425200 (aa)-A3KFL1
ENST00000467138EXOSC2-2072766--- (aa)--
ENST00000490641EXOSC2-208699--- (aa)--
ENST00000491115EXOSC2-209739--- (aa)--
ENST00000372358EXOSC2-2042040XM_005272176ENSP00000361433293 (aa)XP_005272233Q13868
Gene Model
Click here to download ENSG00000130713's gene model file
Pathways
Pathway IDPathway NameSource
hsa03018RNA degradationKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000130713Hemoglobin A, Glycosylated9.4700000E-00519875614
ENSG00000130713Hemoglobin A, Glycosylated9.4530000E-00519875614
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000130713's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000130713EXOSC29575.269ENSAPOG00000008861exosc29778.491Acanthochromis_polyacanthus
ENSG00000130713EXOSC210096.928ENSAMEG00000016239EXOSC210096.928Ailuropoda_melanoleuca
ENSG00000130713EXOSC210077.474ENSACIG00000019054exosc210077.474Amphilophus_citrinellus
ENSG00000130713EXOSC210077.474ENSAOCG00000004983exosc210077.474Amphiprion_ocellaris
ENSG00000130713EXOSC210077.474ENSAOCG00000008577exosc210077.474Amphiprion_ocellaris
ENSG00000130713EXOSC210077.474ENSAPEG00000014088exosc210077.474Amphiprion_percula
ENSG00000130713EXOSC210078.498ENSATEG00000018680exosc210078.498Anabas_testudineus
ENSG00000130713EXOSC29687.589ENSAPLG00000012516EXOSC29787.589Anas_platyrhynchos
ENSG00000130713EXOSC29985.274ENSACAG00000002706EXOSC29985.274Anolis_carolinensis
ENSG00000130713EXOSC210076.792ENSACLG00000013613exosc210076.792Astatotilapia_calliptera
ENSG00000130713EXOSC210080.339ENSAMXG00000042605exosc210080.339Astyanax_mexicanus
ENSG00000130713EXOSC210096.246ENSBTAG00000048071EXOSC210096.246Bos_taurus
ENSG00000130713EXOSC29143.284WBGene00022232exos-28843.284Caenorhabditis_elegans
ENSG00000130713EXOSC210099.317ENSCJAG00000020537EXOSC210099.317Callithrix_jacchus
ENSG00000130713EXOSC29996.233ENSCAFG00000019941EXOSC29996.233Canis_familiaris
ENSG00000130713EXOSC210096.246ENSCAFG00020024047EXOSC210096.246Canis_lupus_dingo
ENSG00000130713EXOSC210096.246ENSCHIG00000021398EXOSC210096.246Capra_hircus
ENSG00000130713EXOSC210095.563ENSTSYG00000001805EXOSC210095.563Carlito_syrichta
ENSG00000130713EXOSC210091.809ENSCPOG00000005902EXOSC210091.809Cavia_porcellus
ENSG00000130713EXOSC210099.317ENSCCAG00000019749EXOSC210099.317Cebus_capucinus
ENSG00000130713EXOSC210099.317ENSCATG00000025389-10099.317Cercocebus_atys
ENSG00000130713EXOSC210096.587ENSCLAG00000006195EXOSC210096.761Chinchilla_lanigera
ENSG00000130713EXOSC210099.317ENSCSAG00000014760EXOSC210099.317Chlorocebus_sabaeus
ENSG00000130713EXOSC210097.270ENSCHOG00000000858EXOSC210097.270Choloepus_hoffmanni
ENSG00000130713EXOSC29986.986ENSCPBG00000022626EXOSC29986.986Chrysemys_picta_bellii
ENSG00000130713EXOSC29959.174ENSCING00000014934-9461.672Ciona_intestinalis
ENSG00000130713EXOSC29961.086ENSCSAVG00000003684-10061.957Ciona_savignyi
ENSG00000130713EXOSC29992.123ENSCANG00000029298-9992.123Colobus_angolensis_palliatus
ENSG00000130713EXOSC210099.317ENSCANG00000039828-10099.317Colobus_angolensis_palliatus
ENSG00000130713EXOSC210095.222ENSCGRG00001013981Exosc210095.222Cricetulus_griseus_chok1gshd
ENSG00000130713EXOSC210095.222ENSCGRG00000017629Exosc210095.222Cricetulus_griseus_crigri
ENSG00000130713EXOSC210076.792ENSCSEG00000016539exosc210076.792Cynoglossus_semilaevis
ENSG00000130713EXOSC210076.451ENSCVAG00000022260exosc210076.451Cyprinodon_variegatus
ENSG00000130713EXOSC210077.966ENSDARG00000028688exosc210077.966Danio_rerio
ENSG00000130713EXOSC210089.908ENSDNOG00000025767-10097.378Dasypus_novemcinctus
ENSG00000130713EXOSC210093.857ENSDORG00000009238Exosc210093.857Dipodomys_ordii
ENSG00000130713EXOSC28961.450FBgn0034879Rrp48961.132Drosophila_melanogaster
ENSG00000130713EXOSC29478.623ENSETEG00000016130-9978.623Echinops_telfairi
ENSG00000130713EXOSC210097.270ENSEASG00005008475EXOSC28697.270Equus_asinus_asinus
ENSG00000130713EXOSC210097.270ENSECAG00000007897EXOSC28697.270Equus_caballus
ENSG00000130713EXOSC210078.644ENSELUG00000013641exosc210078.644Esox_lucius
ENSG00000130713EXOSC210096.928ENSFCAG00000025936EXOSC210096.928Felis_catus
ENSG00000130713EXOSC29883.275ENSFALG00000001446EXOSC29883.275Ficedula_albicollis
ENSG00000130713EXOSC210095.563ENSFDAG00000017196EXOSC210095.563Fukomys_damarensis
ENSG00000130713EXOSC210077.133ENSFHEG00000018571exosc210077.133Fundulus_heteroclitus
ENSG00000130713EXOSC210073.379ENSGMOG00000011785exosc29973.379Gadus_morhua
ENSG00000130713EXOSC29985.616ENSGALG00000040373EXOSC29985.616Gallus_gallus
ENSG00000130713EXOSC29976.027ENSGAFG00000010283exosc29976.027Gambusia_affinis
ENSG00000130713EXOSC210075.427ENSGACG00000016805exosc210076.647Gasterosteus_aculeatus
ENSG00000130713EXOSC28790.196ENSGAGG00000021026EXOSC29690.196Gopherus_agassizii
ENSG00000130713EXOSC210099.317ENSGGOG00000010578EXOSC210099.317Gorilla_gorilla
ENSG00000130713EXOSC210077.474ENSHBUG00000022437exosc210077.474Haplochromis_burtoni
ENSG00000130713EXOSC210096.928ENSHGLG00000012834EXOSC210097.166Heterocephalus_glaber_female
ENSG00000130713EXOSC210096.928ENSHGLG00100007092EXOSC210097.166Heterocephalus_glaber_male
ENSG00000130713EXOSC210075.427ENSHCOG00000019130exosc210075.427Hippocampus_comes
ENSG00000130713EXOSC210077.891ENSIPUG00000015397exosc210077.891Ictalurus_punctatus
ENSG00000130713EXOSC210096.246ENSSTOG00000005999EXOSC210096.246Ictidomys_tridecemlineatus
ENSG00000130713EXOSC210095.222ENSJJAG00000003188Exosc210095.222Jaculus_jaculus
ENSG00000130713EXOSC29977.397ENSKMAG00000017397exosc29977.397Kryptolebias_marmoratus
ENSG00000130713EXOSC210076.792ENSLBEG00000019269exosc210076.792Labrus_bergylta
ENSG00000130713EXOSC210083.673ENSLACG00000015530EXOSC210083.673Latimeria_chalumnae
ENSG00000130713EXOSC210097.279ENSLAFG00000006984EXOSC210097.279Loxodonta_africana
ENSG00000130713EXOSC210099.317ENSMFAG00000000597-10099.317Macaca_fascicularis
ENSG00000130713EXOSC210085.666ENSMFAG00000034160-8485.666Macaca_fascicularis
ENSG00000130713EXOSC210098.947ENSMMUG00000012498EXOSC210098.947Macaca_mulatta
ENSG00000130713EXOSC210086.689ENSMNEG00000028704-9186.689Macaca_nemestrina
ENSG00000130713EXOSC210099.317ENSMNEG00000031861-10099.317Macaca_nemestrina
ENSG00000130713EXOSC210099.317ENSMLEG00000042587-10099.317Mandrillus_leucophaeus
ENSG00000130713EXOSC210085.666ENSMLEG00000029891-9185.666Mandrillus_leucophaeus
ENSG00000130713EXOSC210077.816ENSMAMG00000012466exosc210077.816Mastacembelus_armatus
ENSG00000130713EXOSC210076.451ENSMZEG00005018737exosc210076.451Maylandia_zebra
ENSG00000130713EXOSC29985.616ENSMGAG00000005450EXOSC29985.616Meleagris_gallopavo
ENSG00000130713EXOSC210094.881ENSMAUG00000008299Exosc210094.881Mesocricetus_auratus
ENSG00000130713EXOSC210097.611ENSMICG00000015495EXOSC210097.611Microcebus_murinus
ENSG00000130713EXOSC210094.881ENSMOCG00000008262Exosc210094.881Microtus_ochrogaster
ENSG00000130713EXOSC210078.157ENSMMOG00000009616exosc210078.157Mola_mola
ENSG00000130713EXOSC210092.833ENSMODG00000012114EXOSC210092.833Monodelphis_domestica
ENSG00000130713EXOSC210077.474ENSMALG00000022132exosc210077.474Monopterus_albus
ENSG00000130713EXOSC210093.857MGP_CAROLIEiJ_G0023415Exosc210094.595Mus_caroli
ENSG00000130713EXOSC210093.857ENSMUSG00000039356Exosc210094.595Mus_musculus
ENSG00000130713EXOSC210094.198MGP_PahariEiJ_G0024872Exosc210094.595Mus_pahari
ENSG00000130713EXOSC210093.857MGP_SPRETEiJ_G0024332Exosc210094.595Mus_spretus
ENSG00000130713EXOSC210096.246ENSMPUG00000012686EXOSC210096.246Mustela_putorius_furo
ENSG00000130713EXOSC210096.949ENSMLUG00000008776EXOSC210096.949Myotis_lucifugus
ENSG00000130713EXOSC210095.222ENSNGAG00000019383Exosc210095.222Nannospalax_galili
ENSG00000130713EXOSC210077.133ENSNBRG00000005453exosc210077.133Neolamprologus_brichardi
ENSG00000130713EXOSC2100100.000ENSNLEG00000012533EXOSC2100100.000Nomascus_leucogenys
ENSG00000130713EXOSC210075.229ENSMEUG00000000795EXOSC210072.014Notamacropus_eugenii
ENSG00000130713EXOSC28396.970ENSOPRG00000008688EXOSC26596.970Ochotona_princeps
ENSG00000130713EXOSC210093.174ENSODEG00000016880-10093.174Octodon_degus
ENSG00000130713EXOSC28793.701ENSODEG00000019513-10093.701Octodon_degus
ENSG00000130713EXOSC210077.133ENSONIG00000014086exosc210077.133Oreochromis_niloticus
ENSG00000130713EXOSC210084.642ENSOANG00000001044EXOSC210084.642Ornithorhynchus_anatinus
ENSG00000130713EXOSC210095.222ENSOCUG00000007138EXOSC210095.222Oryctolagus_cuniculus
ENSG00000130713EXOSC210077.474ENSORLG00000007443exosc210077.474Oryzias_latipes
ENSG00000130713EXOSC210077.133ENSORLG00020018902exosc210077.133Oryzias_latipes_hni
ENSG00000130713EXOSC210077.474ENSORLG00015006767exosc210077.474Oryzias_latipes_hsok
ENSG00000130713EXOSC210076.451ENSOMEG00000003533exosc210076.451Oryzias_melastigma
ENSG00000130713EXOSC210097.952ENSOGAG00000007558EXOSC210097.952Otolemur_garnettii
ENSG00000130713EXOSC210095.932ENSOARG00000007438EXOSC210095.932Ovis_aries
ENSG00000130713EXOSC2100100.000ENSPPAG00000034796EXOSC2100100.000Pan_paniscus
ENSG00000130713EXOSC210096.587ENSPPRG00000001089EXOSC210096.587Panthera_pardus
ENSG00000130713EXOSC210096.587ENSPTIG00000021163EXOSC210096.587Panthera_tigris_altaica
ENSG00000130713EXOSC2100100.000ENSPTRG00000045766-100100.000Pan_troglodytes
ENSG00000130713EXOSC2100100.000ENSPTRG00000021476EXOSC2100100.000Pan_troglodytes
ENSG00000130713EXOSC210099.317ENSPANG00000025966EXOSC210099.317Papio_anubis
ENSG00000130713EXOSC29980.277ENSPKIG00000004271exosc29880.277Paramormyrops_kingsleyae
ENSG00000130713EXOSC29987.671ENSPSIG00000006743EXOSC29987.671Pelodiscus_sinensis
ENSG00000130713EXOSC28679.051ENSPMGG00000010980exosc29979.051Periophthalmus_magnuspinnatus
ENSG00000130713EXOSC210094.881ENSPEMG00000006345Exosc210094.881Peromyscus_maniculatus_bairdii
ENSG00000130713EXOSC210076.271ENSPMAG00000001280exosc210076.271Petromyzon_marinus
ENSG00000130713EXOSC210093.174ENSPCIG00000024122EXOSC29793.174Phascolarctos_cinereus
ENSG00000130713EXOSC29976.451ENSPFOG00000019819exosc29976.451Poecilia_formosa
ENSG00000130713EXOSC29976.712ENSPLAG00000004605exosc29976.712Poecilia_latipinna
ENSG00000130713EXOSC29976.712ENSPMEG00000010976exosc29976.712Poecilia_mexicana
ENSG00000130713EXOSC29976.370ENSPREG00000014306exosc29976.370Poecilia_reticulata
ENSG00000130713EXOSC210099.659ENSPPYG00000019695EXOSC210099.659Pongo_abelii
ENSG00000130713EXOSC210096.928ENSPCAG00000013400EXOSC210096.928Procavia_capensis
ENSG00000130713EXOSC210097.952ENSPCOG00000017639EXOSC210097.952Propithecus_coquereli
ENSG00000130713EXOSC210095.563ENSPVAG00000001513EXOSC210095.563Pteropus_vampyrus
ENSG00000130713EXOSC210077.474ENSPNYG00000007383exosc210077.474Pundamilia_nyererei
ENSG00000130713EXOSC210080.272ENSPNAG00000014281exosc210080.272Pygocentrus_nattereri
ENSG00000130713EXOSC210094.881ENSRNOG00000009245Exosc210094.881Rattus_norvegicus
ENSG00000130713EXOSC29992.808ENSRBIG00000029791-9992.808Rhinopithecus_bieti
ENSG00000130713EXOSC210098.976ENSRBIG00000031203-10098.976Rhinopithecus_bieti
ENSG00000130713EXOSC29991.096ENSRROG00000043609-9991.096Rhinopithecus_roxellana
ENSG00000130713EXOSC210098.976ENSRROG00000010827-10098.976Rhinopithecus_roxellana
ENSG00000130713EXOSC28650.000YHR069C-8241.554Saccharomyces_cerevisiae
ENSG00000130713EXOSC210098.976ENSSBOG00000022712EXOSC210098.976Saimiri_boliviensis_boliviensis
ENSG00000130713EXOSC210092.150ENSSHAG00000016050EXOSC210092.150Sarcophilus_harrisii
ENSG00000130713EXOSC210078.840ENSSFOG00015011245exosc210078.840Scleropages_formosus
ENSG00000130713EXOSC210076.792ENSSMAG00000003112exosc210076.792Scophthalmus_maximus
ENSG00000130713EXOSC210076.689ENSSDUG00000004634exosc210076.689Seriola_dumerili
ENSG00000130713EXOSC210077.474ENSSLDG00000010616exosc210077.474Seriola_lalandi_dorsalis
ENSG00000130713EXOSC29987.119ENSSPUG00000013391EXOSC29987.119Sphenodon_punctatus
ENSG00000130713EXOSC210077.474ENSSPAG00000022947exosc210077.474Stegastes_partitus
ENSG00000130713EXOSC210097.952ENSSSCG00000005704EXOSC210097.952Sus_scrofa
ENSG00000130713EXOSC29982.534ENSTGUG00000004697EXOSC29982.534Taeniopygia_guttata
ENSG00000130713EXOSC210073.720ENSTRUG00000022436exosc210073.720Takifugu_rubripes
ENSG00000130713EXOSC210089.761ENSTTRG00000015159EXOSC210089.761Tursiops_truncatus
ENSG00000130713EXOSC210088.991ENSUAMG00000009651EXOSC29993.863Ursus_americanus
ENSG00000130713EXOSC210096.587ENSUMAG00000018726EXOSC210096.587Ursus_maritimus
ENSG00000130713EXOSC210096.246ENSVVUG00000027665EXOSC210096.246Vulpes_vulpes
ENSG00000130713EXOSC210079.522ENSXETG00000001340exosc210079.522Xenopus_tropicalis
ENSG00000130713EXOSC29976.712ENSXMAG00000005265exosc29976.712Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:00001753'-5'-exoribonuclease activity8600032.TASFunction
GO:0000176nuclear exosome (RNase complex)21873635.IBAComponent
GO:0000176nuclear exosome (RNase complex)26166824.IDAComponent
GO:0000177cytoplasmic exosome (RNase complex)21873635.IBAComponent
GO:0000178exosome (RNase complex)21873635.IBAComponent
GO:0000178exosome (RNase complex)20531389.IDAComponent
GO:0000467exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)21873635.IBAProcess
GO:0003723RNA binding21873635.IBAFunction
GO:0004532exoribonuclease activity17174896.IDAFunction
GO:0005515protein binding11719186.12419256.15231747.15687258.16396833.17545563.18326031.20531386.20531389.21255825.26496610.IPIFunction
GO:0005634nucleus17545563.IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus-IDAComponent
GO:0005737cytoplasm17545563.IDAComponent
GO:0005829cytosol-TASComponent
GO:0006364rRNA processing-TASProcess
GO:00083127S RNA binding8600032.TASFunction
GO:0030307positive regulation of cell growth17545563.IMPProcess
GO:0034427nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'21873635.IBAProcess
GO:0034475U4 snRNA 3'-end processing21873635.IBAProcess
GO:0043488regulation of mRNA stability-TASProcess
GO:0043928exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay21873635.IBAProcess
GO:0043928exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay-TASProcess
GO:0071034CUT catabolic process21873635.IBAProcess
GO:0071035nuclear polyadenylation-dependent rRNA catabolic process21873635.IBAProcess
GO:0071038nuclear polyadenylation-dependent tRNA catabolic process21873635.IBAProcess
GO:0071049nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription21873635.IBAProcess
GO:0071051polyadenylation-dependent snoRNA 3'-end processing21873635.IBAProcess
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