EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr202463160Missense_MutationnovelG163V0.09
BLCAchr202462701Missense_MutationNAP207R0.22
BLCAchr202461784Missense_MutationNAP232L0.38
BLCAchr202462659Missense_Mutationrs767441589R221Q0.18
BLCAchr202465778Missense_MutationNAV66G0.25LSM
BLCAchr202463848Missense_MutationnovelG107R0.2
BLCAchr202463849Silentrs112240907I106I0.41
BLCAchr202465739Nonsense_MutationnovelS79*0.17LSM
BLCAchr2024708075'UTRnovel0.71
BRCAchr202462577Intronnovel0.2
BRCAchr2024706975'UTRrs7471932340.2
BRCAchr202461875Intronnovel0.1
BRCAchr202470689Frame_Shift_InsnovelM1?0.3
BRCAchr202463874Missense_MutationnovelA98V0.1
BRCAchr202463016IntronNA0.17
CESCchr2024707415'UTRrs7781466400.18
CESCchr2024707295'UTRnovel0.06
CESCchr202461899Intronrs7513649010.33
CESCchr202461882Intronrs2019570680.47
COADchr202463030IntronNA0.28
COADchr202467627SilentNAC45C0.14
COADchr202461915Intronnovel0.1
COADchr2024617083'UTRnovel0.36
COADchr202462758Missense_MutationNAM188T0.28
COADchr202467642Missense_MutationNAL40F0.77LSM
ESCAchr202462432Intronnovel0.5
GBMchr202463133Missense_Mutationrs376998028R172H0.51
HNSCchr202463158Missense_MutationnovelA164S0.28
HNSCchr2024707805'UTRnovel0.28
KICHchr202461772Missense_Mutationrs778892584R236H0.3
KIRCchr202467753SilentnovelV3V0.37
KIRCchr202461772Missense_Mutationrs778892584R236H0.3
LIHCchr202462649SilentNAP224P0.11
LUADchr202467727Missense_MutationNAH12R0.46LSM
LUADchr202465753SilentNAG74G0.07
LUADchr202461781Missense_Mutationrs558249175P233L0.09
LUSCchr202463780SilentnovelG129G0.24
LUSCchr2024617403'UTRnovel0.33
LUSCchr202465728Nonsense_MutationnovelE83*0.15
LUSCchr202463772Missense_MutationNAR132L0.37
LUSCchr202461788Missense_MutationnovelP231A0.14
LUSCchr2024616573'UTRnovel0.45
LUSCchr202465726Missense_MutationNAE83D0.3
OVchr202462223Intronrs3691898200.3
OVchr202467744Silentrs745345351S6S0.25
PRADchr202461830Intronrs5528102220.18
PRADchr202461891Intronrs7771694020.39
PRADchr202462573Intronnovel0.1
READchr202465758Nonsense_MutationNAR73*0.15LSM
READchr2024707305'UTRnovel0.44
READchr202467668Missense_MutationNAK32E0.43LSM
SARCchr202461930Intronnovel0.19
SKCMchr202463881Missense_MutationnovelP96S0.49
SKCMchr202463810Silentrs775215815P119P0.38
SKCMchr202461785Missense_MutationNAP232T0.28
SKCMchr202463219SilentNAT143T0.25
SKCMchr2024707915'UTRnovel0.29
SKCMchr202462746Missense_MutationnovelP192L0.49
SKCMchr202463121Missense_Mutationrs752259594P176L0.27
SKCMchr202462649Silentrs761783476P224P0.63
SKCMchr202465752Missense_MutationNAE75K0.47LSM
SKCMchr202463120SilentNAP176P0.08
SKCMchr202462648Missense_MutationNAP225S0.45
SKCMchr202461782Missense_Mutationrs777647417P233S0.17
SKCMchr202463819Silentrs200248925A116A0.44
SKCMchr202463839Missense_MutationNAA110P0.37
SKCMchr202461927Intronnovel0.42
SKCMchr202462720Missense_MutationNAP201S0.36
STADchr202465774Silentrs749104286L67L0.16
STADchr202463094Frame_Shift_DelnovelP185Lfs*40.28
STADchr2024617183'UTRrs7762297600.27
STADchr202461772Missense_Mutationrs778892584R236H0.21
UCECchr202462545Intronnovel0.34
UCECchr202465813Missense_MutationnovelK54N0.2LSM
UCECchr202462407Intronnovel0.41
UCECchr202461857Intronnovel0.24
UCECchr202465786SilentNAE63E0.4
UCECchr202462638Missense_Mutationrs759671047R228Q0.39
UCECchr202467612Missense_MutationnovelK50N0.29LSM
UCECchr202461834IntronNA0.41
UCECchr2024616993'UTRnovel0.17
UCECchr202463016IntronNA0.26
UCECchr202462676Missense_Mutationrs542141818M215I0.18
UCECchr202463758Missense_MutationNAP137T0.12
UCECchr202467688Missense_Mutationrs750433171R25Q0.23LSM
UCECchr202467240Intronnovel0.28

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.14440.030954
LUADDEL0.20160.15188
OVAMP0.49570.059168
TGCTDEL0.18670.14117

Survival Analysis
CancerP-value Q-value
THYM0.015

Kaplan-Meier Survival Analysis

KIRC0.00018

Kaplan-Meier Survival Analysis

SARC0.023

Kaplan-Meier Survival Analysis

MESO0.00017

Kaplan-Meier Survival Analysis

ACC0.013

Kaplan-Meier Survival Analysis

ESCA0.0033

Kaplan-Meier Survival Analysis

KIRP0.047

Kaplan-Meier Survival Analysis

LAML0.013

Kaplan-Meier Survival Analysis

LIHC0.0021

Kaplan-Meier Survival Analysis

DLBC0.024

Kaplan-Meier Survival Analysis

LGG0.00071

Kaplan-Meier Survival Analysis

CHOL0.028

Kaplan-Meier Survival Analysis

LUAD0.012

Kaplan-Meier Survival Analysis

UVM0.00013

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000125835 (Gene tree)
Gene ID
6628
Gene Symbol
SNRPB
Alias
COD|SmB/SmB'|Sm-B/B'|snRNP-B|SNRPB1
Full Name
small nuclear ribonucleoprotein polypeptides B and B1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
9,220 bases
Position
chr20:2,461,634-2,470,853
Accession
11153
RBP type
canonical RBP
Summary
The protein encoded by this gene is one of several nuclear proteins that are found in common among U1, U2, U4/U6, and U5 small ribonucleoprotein particles (snRNPs). These snRNPs are involved in pre-mRNA splicing, and the encoded protein may also play a role in pre-mRNA splicing or snRNP structure. Autoantibodies from patients with systemic lupus erythematosus frequently recognize epitopes on the encoded protein. Two transcript variants encoding different isoforms (B and B') have been found for this gene. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000370746LSMPF01423.222.6e-1911
ENSP00000412566LSMPF01423.222.8e-1911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
27287018Functional genomics analyses of RNA-binding proteins reveal the splicing regulator SNRPB as an oncogenic candidate in glioblastoma.Genome Biol2016 Jun 10Correa BRdoi: 10.1186/s13059-016-0990-4.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000381342SNRPB-2011154-ENSP00000370746231 (aa)-P14678
ENST00000438552SNRPB-2021008-ENSP00000412566240 (aa)-P14678
ENST00000474384SNRPB-203985-ENSP0000047457970 (aa)-S4R3P3
Gene Model
Click here to download ENSG00000125835's gene model file
Pathways
Pathway IDPathway NameSource
hsa03040SpliceosomeKEGG
hsa05322Systemic lupus erythematosusKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000125835's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000125835SNRPB9692.760ENSG00000128739SNRPN10096.450
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000125835SNRPB7498.077ENSAPOG00000019606snrpb5694.643Acanthochromis_polyacanthus
ENSG00000125835SNRPB99100.000ENSAMEG00000011353SNRPB98100.000Ailuropoda_melanoleuca
ENSG00000125835SNRPB7692.571ENSACIG00000014480snrpb7194.444Amphilophus_citrinellus
ENSG00000125835SNRPB7498.077ENSAOCG00000006876snrpb6994.643Amphiprion_ocellaris
ENSG00000125835SNRPB6393.182ENSAPEG00000008846-8877.586Amphiprion_percula
ENSG00000125835SNRPB7498.077ENSAPEG00000021585snrpb7194.643Amphiprion_percula
ENSG00000125835SNRPB7498.077ENSATEG00000009836snrpb6994.048Anabas_testudineus
ENSG00000125835SNRPB9295.305ENSACAG00000002053SNRPB9295.305Anolis_carolinensis
ENSG00000125835SNRPB100100.000ENSANAG00000024443-100100.000Aotus_nancymaae
ENSG00000125835SNRPB9993.043ENSANAG00000036271-7693.122Aotus_nancymaae
ENSG00000125835SNRPB7498.077ENSACLG00000014707snrpb6994.643Astatotilapia_calliptera
ENSG00000125835SNRPB7498.077ENSAMXG00000029434snrpb7094.048Astyanax_mexicanus
ENSG00000125835SNRPB8170.492ENSBTAG00000024548-8270.492Bos_taurus
ENSG00000125835SNRPB10099.567ENSBTAG00000001038SNRPB10099.567Bos_taurus
ENSG00000125835SNRPB9392.056ENSCJAG00000023097-7992.063Callithrix_jacchus
ENSG00000125835SNRPB7494.231ENSCJAG00000041673-7194.545Callithrix_jacchus
ENSG00000125835SNRPB100100.000ENSCJAG00000020971-100100.000Callithrix_jacchus
ENSG00000125835SNRPB100100.000ENSCAFG00000006693-100100.000Canis_familiaris
ENSG00000125835SNRPB8188.421ENSCAFG00000031109-7984.737Canis_familiaris
ENSG00000125835SNRPB6695.652ENSCAFG00020013247-6987.931Canis_lupus_dingo
ENSG00000125835SNRPB100100.000ENSCAFG00020016981-100100.000Canis_lupus_dingo
ENSG00000125835SNRPB6795.745ENSCAFG00020020370-6197.826Canis_lupus_dingo
ENSG00000125835SNRPB5194.444ENSCAFG00020016234-7590.909Canis_lupus_dingo
ENSG00000125835SNRPB8673.846ENSCAFG00020003638-8473.846Canis_lupus_dingo
ENSG00000125835SNRPB10099.567ENSCHIG00000025449-10099.567Capra_hircus
ENSG00000125835SNRPB8068.333ENSCHIG00000024610-7674.510Capra_hircus
ENSG00000125835SNRPB100100.000ENSTSYG00000014498-100100.000Carlito_syrichta
ENSG00000125835SNRPB9776.889ENSTSYG00000032303-5579.333Carlito_syrichta
ENSG00000125835SNRPB99100.000ENSCAPG00000012669SNRPB100100.000Cavia_aperea
ENSG00000125835SNRPB100100.000ENSCPOG00000039408SNRPB100100.000Cavia_porcellus
ENSG00000125835SNRPB7386.275ENSCCAG00000035140-8986.275Cebus_capucinus
ENSG00000125835SNRPB100100.000ENSCCAG00000026002SNRPB100100.000Cebus_capucinus
ENSG00000125835SNRPB100100.000ENSCATG00000030230SNRPB100100.000Cercocebus_atys
ENSG00000125835SNRPB10098.750ENSCLAG00000012442SNRPB10098.750Chinchilla_lanigera
ENSG00000125835SNRPB100100.000ENSCSAG00000010840SNRPB100100.000Chlorocebus_sabaeus
ENSG00000125835SNRPB10096.667ENSCPBG00000026801SNRPB10096.667Chrysemys_picta_bellii
ENSG00000125835SNRPB100100.000ENSCANG00000019461SNRPB100100.000Colobus_angolensis_palliatus
ENSG00000125835SNRPB100100.000ENSCGRG00001023046Snrpb100100.000Cricetulus_griseus_chok1gshd
ENSG00000125835SNRPB96100.000ENSCGRG00000010423Snrpb98100.000Cricetulus_griseus_crigri
ENSG00000125835SNRPB74100.000ENSCSEG00000020328snrpb7094.643Cynoglossus_semilaevis
ENSG00000125835SNRPB74100.000ENSDARG00000011125snrpb6994.643Danio_rerio
ENSG00000125835SNRPB100100.000ENSDNOG00000015545-100100.000Dasypus_novemcinctus
ENSG00000125835SNRPB7498.077ENSDNOG00000007896-7194.220Dasypus_novemcinctus
ENSG00000125835SNRPB9799.552ENSDORG00000029558Snrpb10099.565Dipodomys_ordii
ENSG00000125835SNRPB7671.698FBgn0262601SmB7470.470Drosophila_melanogaster
ENSG00000125835SNRPB74100.000ENSETEG00000006830SNRPB7477.381Echinops_telfairi
ENSG00000125835SNRPB7492.308ENSEBUG00000007467SNRPB6288.591Eptatretus_burgeri
ENSG00000125835SNRPB10099.567ENSEASG00005012991SNRPB10099.567Equus_asinus_asinus
ENSG00000125835SNRPB100100.000ENSECAG00000011944SNRPB100100.000Equus_caballus
ENSG00000125835SNRPB98100.000ENSEEUG00000015568SNRPB8298.276Erinaceus_europaeus
ENSG00000125835SNRPB7498.077ENSELUG00000014564snrpb7193.210Esox_lucius
ENSG00000125835SNRPB7473.077ENSFCAG00000041049-6473.077Felis_catus
ENSG00000125835SNRPB100100.000ENSFCAG00000034090-100100.000Felis_catus
ENSG00000125835SNRPB9796.121ENSFALG00000004866SNRPB10096.121Ficedula_albicollis
ENSG00000125835SNRPB100100.000ENSFDAG00000009937SNRPB100100.000Fukomys_damarensis
ENSG00000125835SNRPB6080.952ENSFHEG00000006534-7863.768Fundulus_heteroclitus
ENSG00000125835SNRPB10096.250ENSGALG00000035421SNRPN10096.250Gallus_gallus
ENSG00000125835SNRPB7198.000ENSGAFG00000019558snrpb7294.012Gambusia_affinis
ENSG00000125835SNRPB7498.077ENSGACG00000003262snrpb7094.643Gasterosteus_aculeatus
ENSG00000125835SNRPB10096.667ENSGAGG00000001308SNRPB10096.667Gopherus_agassizii
ENSG00000125835SNRPB100100.000ENSGGOG00000016138SNRPB100100.000Gorilla_gorilla
ENSG00000125835SNRPB7498.077ENSHBUG00000008369snrpb6994.643Haplochromis_burtoni
ENSG00000125835SNRPB100100.000ENSHGLG00000016241-100100.000Heterocephalus_glaber_female
ENSG00000125835SNRPB7492.308ENSHGLG00000016505-7290.000Heterocephalus_glaber_female
ENSG00000125835SNRPB100100.000ENSHGLG00100012877-100100.000Heterocephalus_glaber_male
ENSG00000125835SNRPB7492.308ENSHGLG00100004178-7290.000Heterocephalus_glaber_male
ENSG00000125835SNRPB7498.077ENSHCOG00000014888snrpb7094.643Hippocampus_comes
ENSG00000125835SNRPB74100.000ENSIPUG00000024569SNRPB7094.643Ictalurus_punctatus
ENSG00000125835SNRPB10098.333ENSSTOG00000033664-10098.333Ictidomys_tridecemlineatus
ENSG00000125835SNRPB9481.944ENSSTOG00000027821-6299.265Ictidomys_tridecemlineatus
ENSG00000125835SNRPB100100.000ENSJJAG00000024170Snrpb100100.000Jaculus_jaculus
ENSG00000125835SNRPB74100.000ENSKMAG00000014494snrpb6895.238Kryptolebias_marmoratus
ENSG00000125835SNRPB7498.077ENSLBEG00000005678snrpb7094.643Labrus_bergylta
ENSG00000125835SNRPB9693.213ENSLACG00000011459SNRPB9293.213Latimeria_chalumnae
ENSG00000125835SNRPB74100.000ENSLOCG00000002687snrpb7095.238Lepisosteus_oculatus
ENSG00000125835SNRPB9996.053ENSLAFG00000017588SNRPB9996.053Loxodonta_africana
ENSG00000125835SNRPB100100.000ENSMFAG00000038756SNRPB100100.000Macaca_fascicularis
ENSG00000125835SNRPB100100.000ENSMMUG00000010050SNRPB100100.000Macaca_mulatta
ENSG00000125835SNRPB100100.000ENSMNEG00000027954SNRPB100100.000Macaca_nemestrina
ENSG00000125835SNRPB100100.000ENSMLEG00000022346SNRPB100100.000Mandrillus_leucophaeus
ENSG00000125835SNRPB7398.039ENSMAMG00000009294snrpb6794.611Mastacembelus_armatus
ENSG00000125835SNRPB7498.077ENSMZEG00005011856snrpb6994.643Maylandia_zebra
ENSG00000125835SNRPB9085.714ENSMAUG00000020656-65100.000Mesocricetus_auratus
ENSG00000125835SNRPB74100.000ENSMAUG00000006516-80100.000Mesocricetus_auratus
ENSG00000125835SNRPB9785.333ENSMICG00000015983-8789.947Microcebus_murinus
ENSG00000125835SNRPB10099.567ENSMICG00000016519SNRPB10099.567Microcebus_murinus
ENSG00000125835SNRPB7492.308ENSMOCG00000021362-7273.410Microtus_ochrogaster
ENSG00000125835SNRPB10099.567ENSMOCG00000002892-10099.567Microtus_ochrogaster
ENSG00000125835SNRPB7992.857ENSMMOG00000013226snrpb7194.611Mola_mola
ENSG00000125835SNRPB7498.077ENSMALG00000020839snrpb5694.048Monopterus_albus
ENSG00000125835SNRPB10099.567MGP_CAROLIEiJ_G0024293Snrpb10099.567Mus_caroli
ENSG00000125835SNRPB10099.567ENSMUSG00000027404Snrpb10099.567Mus_musculus
ENSG00000125835SNRPB10099.567MGP_PahariEiJ_G0025738Snrpb10099.567Mus_pahari
ENSG00000125835SNRPB10099.567MGP_SPRETEiJ_G0025213Snrpb10099.567Mus_spretus
ENSG00000125835SNRPB100100.000ENSMPUG00000009283SNRPB100100.000Mustela_putorius_furo
ENSG00000125835SNRPB10096.667ENSMLUG00000016951SNRPB10096.667Myotis_lucifugus
ENSG00000125835SNRPB100100.000ENSNGAG00000012051Snrpb100100.000Nannospalax_galili
ENSG00000125835SNRPB7890.055ENSNBRG00000006353snrpb6293.293Neolamprologus_brichardi
ENSG00000125835SNRPB100100.000ENSNLEG00000029067SNRPB100100.000Nomascus_leucogenys
ENSG00000125835SNRPB9797.333ENSMEUG00000015625SNRPB10097.333Notamacropus_eugenii
ENSG00000125835SNRPB10095.417ENSODEG00000016060-10095.417Octodon_degus
ENSG00000125835SNRPB100100.000ENSODEG00000004305-100100.000Octodon_degus
ENSG00000125835SNRPB7498.077ENSONIG00000000248snrpb6994.643Oreochromis_niloticus
ENSG00000125835SNRPB10097.083ENSOCUG00000028215-10097.083Oryctolagus_cuniculus
ENSG00000125835SNRPB9394.884ENSOCUG00000021456-7895.767Oryctolagus_cuniculus
ENSG00000125835SNRPB10099.583ENSOCUG00000014042-10099.583Oryctolagus_cuniculus
ENSG00000125835SNRPB7793.296ENSOCUG00000022423-8696.429Oryctolagus_cuniculus
ENSG00000125835SNRPB9271.831ENSOCUG00000026813-6370.946Oryctolagus_cuniculus
ENSG00000125835SNRPB7498.077ENSORLG00000021862snrpb6994.643Oryzias_latipes
ENSG00000125835SNRPB100100.000ENSOGAG00000016149SNRPB100100.000Otolemur_garnettii
ENSG00000125835SNRPB10099.567ENSOARG00000006740SNRPB10099.567Ovis_aries
ENSG00000125835SNRPB100100.000ENSPPAG00000036314SNRPB100100.000Pan_paniscus
ENSG00000125835SNRPB9967.123ENSPPRG00000024804-9067.123Panthera_pardus
ENSG00000125835SNRPB100100.000ENSPPRG00000003233-100100.000Panthera_pardus
ENSG00000125835SNRPB7378.431ENSPPRG00000018908-7077.419Panthera_pardus
ENSG00000125835SNRPB99100.000ENSPTIG00000007468SNRPB99100.000Panthera_tigris_altaica
ENSG00000125835SNRPB100100.000ENSPTRG00000013176SNRPB100100.000Pan_troglodytes
ENSG00000125835SNRPB100100.000ENSPANG00000020362SNRPB100100.000Papio_anubis
ENSG00000125835SNRPB74100.000ENSPKIG00000002865snrpb7094.048Paramormyrops_kingsleyae
ENSG00000125835SNRPB9996.653ENSPSIG00000014125SNRPB9896.653Pelodiscus_sinensis
ENSG00000125835SNRPB7790.449ENSPMGG00000016349snrpb6992.025Periophthalmus_magnuspinnatus
ENSG00000125835SNRPB100100.000ENSPEMG00000007948Snrpb100100.000Peromyscus_maniculatus_bairdii
ENSG00000125835SNRPB7494.231ENSPMAG00000004923SNRPB10093.258Petromyzon_marinus
ENSG00000125835SNRPB9997.908ENSPCIG00000004694SNRPB9997.908Phascolarctos_cinereus
ENSG00000125835SNRPB7398.039ENSPFOG00000011802snrpb6395.973Poecilia_formosa
ENSG00000125835SNRPB6697.826ENSPLAG00000014130snrpb5995.556Poecilia_latipinna
ENSG00000125835SNRPB6697.826ENSPREG00000015515snrpb6295.556Poecilia_reticulata
ENSG00000125835SNRPB100100.000ENSPPYG00000010841SNRPB100100.000Pongo_abelii
ENSG00000125835SNRPB100100.000ENSPCOG00000013686SNRPB100100.000Propithecus_coquereli
ENSG00000125835SNRPB9898.678ENSPVAG00000017013SNRPB8098.678Pteropus_vampyrus
ENSG00000125835SNRPB7498.077ENSPNYG00000014788snrpb6994.643Pundamilia_nyererei
ENSG00000125835SNRPB74100.000ENSPNAG00000016126snrpb7094.643Pygocentrus_nattereri
ENSG00000125835SNRPB100100.000ENSRNOG00000006961Snrpb100100.000Rattus_norvegicus
ENSG00000125835SNRPB10099.583ENSRBIG00000040505SNRPB10099.583Rhinopithecus_bieti
ENSG00000125835SNRPB100100.000ENSRROG00000036094SNRPB100100.000Rhinopithecus_roxellana
ENSG00000125835SNRPB100100.000ENSSBOG00000027310SNRPB100100.000Saimiri_boliviensis_boliviensis
ENSG00000125835SNRPB10098.333ENSSHAG00000010394SNRPB10098.333Sarcophilus_harrisii
ENSG00000125835SNRPB74100.000ENSSFOG00015002870snrpb7093.452Scleropages_formosus
ENSG00000125835SNRPB7498.077ENSSMAG00000006766snrpb7094.048Scophthalmus_maximus
ENSG00000125835SNRPB7498.077ENSSDUG00000018539snrpb6994.643Seriola_dumerili
ENSG00000125835SNRPB7498.077ENSSLDG00000022391snrpb6994.643Seriola_lalandi_dorsalis
ENSG00000125835SNRPB73100.000ENSSARG00000003084SNRPB7484.884Sorex_araneus
ENSG00000125835SNRPB9996.653ENSSPUG00000015659SNRPB10096.653Sphenodon_punctatus
ENSG00000125835SNRPB7498.077ENSSPAG00000021992snrpb6994.643Stegastes_partitus
ENSG00000125835SNRPB10099.567ENSSSCG00000040857-10099.567Sus_scrofa
ENSG00000125835SNRPB10080.087ENSSSCG00000011966-9175.943Sus_scrofa
ENSG00000125835SNRPB7398.039ENSTGUG00000005684SNRPB5996.429Taeniopygia_guttata
ENSG00000125835SNRPB7498.077ENSTRUG00000023094snrpb7294.048Takifugu_rubripes
ENSG00000125835SNRPB7498.077ENSTNIG00000002991snrpb7094.048Tetraodon_nigroviridis
ENSG00000125835SNRPB7475.000ENSUAMG00000016301-7075.000Ursus_americanus
ENSG00000125835SNRPB75100.000ENSUAMG00000005984-83100.000Ursus_americanus
ENSG00000125835SNRPB6997.917ENSUMAG00000002123-6497.842Ursus_maritimus
ENSG00000125835SNRPB7475.000ENSUMAG00000011571-6375.000Ursus_maritimus
ENSG00000125835SNRPB10099.583ENSVVUG00000025654-10099.583Vulpes_vulpes
ENSG00000125835SNRPB73100.000ENSVVUG00000018297-5243.713Vulpes_vulpes
ENSG00000125835SNRPB9971.233ENSVVUG00000011423-9571.233Vulpes_vulpes
ENSG00000125835SNRPB9779.736ENSVVUG00000010086-8581.122Vulpes_vulpes
ENSG00000125835SNRPB9295.475ENSXETG00000027266snrpb9395.475Xenopus_tropicalis
ENSG00000125835SNRPB5188.889ENSXCOG00000017217snrpb8989.333Xiphophorus_couchianus
ENSG00000125835SNRPB6697.826ENSXMAG00000028767snrpb5895.556Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000387spliceosomal snRNP assembly18984161.IDAProcess
GO:0000387spliceosomal snRNP assembly-TASProcess
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome11991638.ICProcess
GO:0000398mRNA splicing, via spliceosome28076346.28781166.IDAProcess
GO:0000398mRNA splicing, via spliceosome-TASProcess
GO:0003723RNA binding22681889.HDAFunction
GO:0003723RNA binding18082603.IPIFunction
GO:0005515protein binding8076607.11714716.11748230.12065586.12975319.16087681.18951082.18984161.19325628.22365833.IPIFunction
GO:0005634nucleus28076346.28781166.IDAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005681spliceosomal complex2531083.TASComponent
GO:0005682U5 snRNP21873635.IBAComponent
GO:0005683U7 snRNP11574479.IDAComponent
GO:0005685U1 snRNP21873635.IBAComponent
GO:0005685U1 snRNP21113136.25555158.IDAComponent
GO:0005686U2 snRNP21873635.IBAComponent
GO:0005687U4 snRNP21873635.IBAComponent
GO:0005687U4 snRNP21516107.IDAComponent
GO:0005689U12-type spliceosomal complex15146077.IDAComponent
GO:0005697telomerase holoenzyme complex18082603.IDAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005829cytosol18984161.IDAComponent
GO:0005829cytosol-TASComponent
GO:0006369termination of RNA polymerase II transcription-TASProcess
GO:0006479protein methylation18495660.IDAProcess
GO:0008334histone mRNA metabolic process-TASProcess
GO:0008380RNA splicing2531083.TASProcess
GO:0030532small nuclear ribonucleoprotein complex2531083.TASComponent
GO:0034709methylosome18984161.IDAComponent
GO:0034719SMN-Sm protein complex18984161.IDAComponent
GO:0046540U4/U6 x U5 tri-snRNP complex21873635.IBAComponent
GO:0046540U4/U6 x U5 tri-snRNP complex26912367.IDAComponent
GO:0051170import into nucleus-TASProcess
GO:0070034telomerase RNA binding18082603.IPIFunction
GO:0071004U2-type prespliceosome21873635.IBAComponent
GO:0071005U2-type precatalytic spliceosome28781166.IDAComponent
GO:0071007U2-type catalytic step 2 spliceosome28076346.IDAComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome11991638.IDAComponent
GO:0071204histone pre-mRNA 3'end processing complex-IEAComponent
GO:0071208histone pre-mRNA DCP binding-IEAFunction
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