EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
22119546Clinical proteomics identified ATP-dependent RNA helicase DDX39 as a novel biomarker to predict poor prognosis of patients with gastrointestinal stromal tumor.J Proteomics2012 Feb 2Kikuta Kdoi: 10.1016/j.jprot.2011.10.005
17548965DDX39, upregulated in lung squamous cell cancer, displays RNA helicase activities and promotes cancer cell growth.Cancer Biol Ther2007 JunSugiura T-

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1914409412Missense_Mutationrs188717433R337Q0.26
BLCAchr1914409442Missense_MutationnovelS327L0.37
BLCAchr1914409132Missense_Mutationrs777641117S391F0.45
BLCAchr1914411068Silentrs142002555L178L0.12
BRCAchr1914409037Missense_MutationNAI423L0.14
BRCAchr1914410986Splice_Regionnovel0.22
BRCAchr1914413082Missense_Mutationrs754645617R47W0.27
BRCAchr1914413182Nonsense_MutationNAY13*0.12
CESCchr1914409911IntronNA0.25
CESCchr1914409766SilentNAL280L0.11
CESCchr1914409379Missense_MutationnovelR348Q0.4
CESCchr1914409951Intronrs7489163910.28
CESCchr1914411129Missense_MutationnovelE158A0.45
CESCchr1914409943Intronnovel0.36
CESCchr1914409828Missense_MutationNAG260S0.5
COADchr1914410244Missense_MutationNAR235Q0.29
COADchr1914413080SilentNAR47R0.13
COADchr1914409442Missense_MutationnovelS327L0.21
COADchr1914409634Silentrs371615674F292F0.35
COADchr1914410278Missense_MutationNAM224V0.41
COADchr1914411539SilentnovelY132Y0.05
COADchr1914411528Missense_MutationNAS136F0.63
ESCAchr1914411598Missense_MutationnovelV113L0.08
ESCAchr1914411554Missense_MutationnovelQ127H0.22
ESCAchr1914409965Intronnovel0.12
GBMchr1914409053Silentrs148589157I417I0.19
HNSCchr1914409753Missense_MutationnovelE285Q0.32
HNSCchr1914410237SilentnovelV237V0.3
KIRCchr1914411056Missense_MutationnovelR182S0.33
LIHCchr19144088933'UTRnovel0.35
LUADchr1914411546Missense_MutationnovelK130R0.76
LUSCchr1914409567Missense_Mutationrs141207973A315T0.15
LUSCchr1914413110SilentnovelS37S0.13
LUSCchr1914409552Frame_Shift_DelnovelM320Wfs*660.29
LUSCchr1914411585Missense_MutationNAV117A0.1
OVchr1914408941SilentnovelR427R0.09
OVchr1914411081Missense_MutationNAR174H0.27
OVchr19144088703'UTRnovel0.16
PAADchr1914410218Missense_MutationnovelD244N0.2
PRADchr1914412600Missense_Mutationrs374281705A96V0.07ResIII
SKCMchr1914411528Missense_MutationNAS136F0.35
SKCMchr1914409600Nonsense_MutationNAQ304*0.42
SKCMchr1914409333Missense_MutationnovelM363I0.4
SKCMchr1914412593Silentrs774517231F98F0.42
SKCMchr1914411113SilentnovelN163N0.17
SKCMchr1914411564Missense_MutationNAL124Q0.37
SKCMchr1914410241Missense_MutationNAP236L0.28
SKCMchr1914409920Intronnovel0.46
SKCMchr1914411061Missense_MutationnovelN181D0.22
STADchr1914410330Missense_MutationNAM206I0.2
STADchr1914411068Silentrs142002555L178L0.16
STADchr1914409077SilentNAN409N0.09
STADchr1914409940Intronnovel0.46
STADchr1914411528Missense_MutationNAS136F0.2
STADchr1914409816Missense_MutationNAY264H0.4
STADchr1914412557Missense_MutationnovelN110K0.3
THCAchr1914412600Missense_Mutationrs374281705A96V0.21ResIII
UCECchr1914412579Missense_MutationNAL103Q0.61ResIII
UCECchr1914412603Missense_MutationnovelT95I0.15ResIII
UCECchr19144193225'UTRnovel0.48
UCECchr1914409426Silentrs772264761F332F0.35
UCECchr1914412593Silentrs774517231F98F0.35
UCECchr1914411072Missense_MutationNAA177V0.42
UCECchr1914411158SilentNAF148F0.24
UCECchr1914413182Silentrs191833585Y13Y0.22
UCECchr19144193385'UTRnovel0.11
UCECchr1914413112Missense_MutationnovelS37P0.06
UCECchr19144089013'UTRnovel0.2
UCECchr1914412637Missense_MutationnovelV84I0.37ResIII
UCECchr1914411071Silentrs775009962A177A0.43
UCECchr1914413081Missense_Mutationrs753497125R47Q0.1
UCECchr19144193165'UTRnovel0.07
UCECchr1914411533SilentnovelR134R0.42
UCECchr1914409567Missense_Mutationrs141207973A315T0.24
UCECchr1914413092SilentnovelS43S0.54
UCECchr1914409829Silentrs556046710H259H0.34
UCECchr1914410266Missense_MutationnovelA228T0.32
UCECchr1914410309SilentnovelI213I0.46
UCECchr19144089233'UTRnovel0.32
UCECchr1914411101Silentrs767315372V167V0.61
UCECchr1914410282SilentnovelQ222Q0.06
UCECchr1914409647Splice_SitenovelX289_splice0.2
UCECchr1914409964Intronrs7607938320.41
UCECchr1914409052Missense_MutationnovelD418N0.31
UCECchr1914410240SilentNAP236P0.4
UCECchr1914411506Missense_MutationnovelK143N0.3
UCECchr1914412577Nonsense_MutationNAQ104*0.26ResIII
UCECchr19144088763'UTRnovel0.25
UCECchr1914411072Missense_MutationNAA177V0.26
UCECchr1914411529Missense_MutationnovelS136P0.41
UCECchr1914410329Missense_MutationnovelR207W0.25

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
READDEL0.08480.23023
THCADEL0.0140.090402

Survival Analysis
CancerP-value Q-value
THYM0.005

Kaplan-Meier Survival Analysis

KIRC0.00012

Kaplan-Meier Survival Analysis

STAD0.0022

Kaplan-Meier Survival Analysis

MESO0.0002

Kaplan-Meier Survival Analysis

SKCM0.019

Kaplan-Meier Survival Analysis

LUSC0.029

Kaplan-Meier Survival Analysis

ESCA0.038

Kaplan-Meier Survival Analysis

KIRP0.018

Kaplan-Meier Survival Analysis

BLCA0.026

Kaplan-Meier Survival Analysis

CESC0.0018

Kaplan-Meier Survival Analysis

LAML0.014

Kaplan-Meier Survival Analysis

LIHC0.00086

Kaplan-Meier Survival Analysis

DLBC0.013

Kaplan-Meier Survival Analysis

LGG0.0023

Kaplan-Meier Survival Analysis

UVM0.00018

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000123136 (Gene tree)
Gene ID
10212
Gene Symbol
DDX39A
Alias
DDXL|BAT1L|URH49|DDX39
Full Name
DExD-box helicase 39A
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
10,586 bases
Position
chr19:14,408,798-14,419,383
Accession
17821
RBP type
canonical RBP
Summary
This gene encodes a member of the DEAD box protein family. These proteins are characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD) and are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of the DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene is thought to play a role in the prognosis of patients with gastrointestinal stromal tumors. A pseudogene of this gene is present on chromosome 13. Alternate splicing results in multiple transcript variants. Additional alternatively spliced transcript variants of this gene have been described, but their full-length nature is not known. [provided by RefSeq, Sep 2013]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000392929ResIIIPF04851.151.5e-0511
ENSP00000467911ResIIIPF04851.151.5e-0511
ENSP00000242776ResIIIPF04851.153.5e-0511
ENSP00000392929DEADPF00270.291.7e-3811
ENSP00000467911DEADPF00270.292e-3811
ENSP00000242776DEADPF00270.293.9e-3811
ENSP00000467411DEADPF00270.291e-2711
ENSP00000466810DEADPF00270.292.3e-1111
ENSP00000464801DEADPF00270.296.1e-1011
ENSP00000465926DEADPF00270.293.3e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
16500893RNA-binding of the human cytomegalovirus transactivator protein UL69, mediated by arginine-rich motifs, is not required for nuclear export of unspliced RNA.Nucleic Acids Res2006 Feb 25Toth Z-
11380625The central MHC gene, BAT1, may encode a protein that down-regulates cytokine production.Genes Cells2001 MayAllcock RJ-
17000901The solution structure of REF2-I reveals interdomain interactions and regions involved in binding mRNA export factors and RNA.RNA2006 NovGolovanov AP-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000588542DDX39A-2071297--- (aa)--
ENST00000454233DDX39A-203922-ENSP00000392929267 (aa)-O00148
ENST00000587730DDX39A-2061813--- (aa)--
ENST00000590315DDX39A-213566-ENSP00000467411189 (aa)-K7EPJ3
ENST00000592632DDX39A-218586--- (aa)--
ENST00000589318DDX39A-2091903--- (aa)--
ENST00000586558DDX39A-2041127--- (aa)--
ENST00000586993DDX39A-205585-ENSP00000464801125 (aa)-K7EIL8
ENST00000592927DDX39A-219823-ENSP0000048583896 (aa)-A0A0D9SEM9
ENST00000593026DDX39A-221657--- (aa)--
ENST00000589675DDX39A-210829-ENSP00000467911255 (aa)-K7EQN7
ENST00000590696DDX39A-215563-ENSP0000046704092 (aa)-K7ENP6
ENST00000242776DDX39A-2011471XM_006722606ENSP00000242776427 (aa)XP_006722669O00148
ENST00000590556DDX39A-214575--- (aa)--
ENST00000324340DDX39A-2021355-ENSP00000322749322 (aa)-O00148
ENST00000591275DDX39A-216484-ENSP00000465926108 (aa)-K7EL56
ENST00000590260DDX39A-212988--- (aa)--
ENST00000590239DDX39A-211565-ENSP00000466810130 (aa)-K7EN69
ENST00000593008DDX39A-220538--- (aa)--
ENST00000592391DDX39A-2171080--- (aa)--
ENST00000588692DDX39A-2081478-ENSP00000467862267 (aa)-O00148
Gene Model
Click here to download ENSG00000123136's gene model file
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000123136rs1171119161914418270?Mean corpuscular hemoglobin30595370EFO_0004527
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000123136's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000123136DDX39A7530.189ENSG00000278053DDX525043.103
ENSG00000123136DDX39A9332.222ENSG00000124228DDX278130.088
ENSG00000123136DDX39A7734.337ENSG00000136271DDX568835.366
ENSG00000123136DDX39A9431.868ENSG00000168872DDX19A9432.181
ENSG00000123136DDX39A9230.682ENSG00000123064DDX549430.653
ENSG00000123136DDX39A9237.079ENSG00000105671DDX498032.481
ENSG00000123136DDX39A8230.084ENSG00000109832DDX259442.188
ENSG00000123136DDX39A9240.909ENSG00000156976EIF4A29038.649
ENSG00000123136DDX39A9539.560ENSG00000110367DDX68236.591
ENSG00000123136DDX39A9239.773ENSG00000141543EIF4A38936.216
ENSG00000123136DDX39A9739.785ENSG00000067048DDX3Y6130.807
ENSG00000123136DDX39A9037.931ENSG00000213782DDX477534.582
ENSG00000123136DDX39A9739.785ENSG00000215301DDX3X7931.496
ENSG00000123136DDX39A9430.208ENSG00000111364DDX558530.675
ENSG00000123136DDX39A9339.326ENSG00000161960EIF4A19841.221
ENSG00000123136DDX39A10089.953ENSG00000198563DDX39B10089.953
ENSG00000123136DDX39A9834.375ENSG00000088205DDX185230.618
ENSG00000123136DDX39A9333.708ENSG00000118197DDX597830.120
ENSG00000123136DDX39A9431.868ENSG00000157349DDX19B9632.410
ENSG00000123136DDX39A9135.632ENSG00000198231DDX425131.016
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000123136DDX39A10085.385ENSAPOG00000009309-10081.019Acanthochromis_polyacanthus
ENSG00000123136DDX39A10090.164ENSAPOG00000013540ddx39aa10090.164Acanthochromis_polyacanthus
ENSG00000123136DDX39A10097.658ENSAMEG00000013379DDX39A9897.658Ailuropoda_melanoleuca
ENSG00000123136DDX39A10090.421ENSACIG00000007948-10090.164Amphilophus_citrinellus
ENSG00000123136DDX39A10090.632ENSACIG00000020898DDX39A10090.632Amphilophus_citrinellus
ENSG00000123136DDX39A10090.398ENSAOCG00000007403-10090.398Amphiprion_ocellaris
ENSG00000123136DDX39A10090.398ENSAOCG00000011728DDX39A10090.398Amphiprion_ocellaris
ENSG00000123136DDX39A10090.398ENSAPEG00000017193-10090.398Amphiprion_percula
ENSG00000123136DDX39A10090.398ENSAPEG00000001421DDX39A10090.398Amphiprion_percula
ENSG00000123136DDX39A10091.121ENSATEG00000012052DDX39A9690.632Anabas_testudineus
ENSG00000123136DDX39A10091.355ENSATEG00000004275ddx39aa10090.867Anabas_testudineus
ENSG00000123136DDX39A10093.443ENSACAG00000010756DDX39A10093.443Anolis_carolinensis
ENSG00000123136DDX39A10098.595ENSANAG00000036829-10098.595Aotus_nancymaae
ENSG00000123136DDX39A9683.696ENSANAG00000025403-9972.770Aotus_nancymaae
ENSG00000123136DDX39A10090.421ENSACLG00000001214DDX39A10089.930Astatotilapia_calliptera
ENSG00000123136DDX39A10089.953ENSACLG00000004945-10089.696Astatotilapia_calliptera
ENSG00000123136DDX39A10088.993ENSAMXG00000015256-10088.993Astyanax_mexicanus
ENSG00000123136DDX39A10091.803ENSAMXG00000018631DDX39A10091.803Astyanax_mexicanus
ENSG00000123136DDX39A10096.487ENSBTAG00000021820DDX39A10096.487Bos_taurus
ENSG00000123136DDX39A9876.850WBGene00001840hel-19976.134Caenorhabditis_elegans
ENSG00000123136DDX39A10099.074ENSCJAG00000004760DDX39A10097.378Callithrix_jacchus
ENSG00000123136DDX39A10097.892ENSCAFG00000016355DDX39A10097.892Canis_familiaris
ENSG00000123136DDX39A10097.892ENSCAFG00020007399DDX39A10097.892Canis_lupus_dingo
ENSG00000123136DDX39A10096.721ENSCHIG00000019059DDX39A10096.721Capra_hircus
ENSG00000123136DDX39A10097.658ENSTSYG00000030248DDX39A10097.658Carlito_syrichta
ENSG00000123136DDX39A10096.721ENSCAPG00000010901DDX39A10096.721Cavia_aperea
ENSG00000123136DDX39A10096.487ENSCPOG00000008615DDX39A10096.487Cavia_porcellus
ENSG00000123136DDX39A10099.297ENSCCAG00000034932DDX39A10099.297Cebus_capucinus
ENSG00000123136DDX39A100100.000ENSCATG00000044440DDX39A100100.000Cercocebus_atys
ENSG00000123136DDX39A10096.487ENSCLAG00000015069DDX39A10096.487Chinchilla_lanigera
ENSG00000123136DDX39A100100.000ENSCSAG00000006342DDX39A100100.000Chlorocebus_sabaeus
ENSG00000123136DDX39A10089.231ENSCPBG00000011879DDX39A10089.019Chrysemys_picta_bellii
ENSG00000123136DDX39A9188.689ENSCING00000005175-9886.091Ciona_intestinalis
ENSG00000123136DDX39A9288.579ENSCSAVG00000002162-9885.851Ciona_savignyi
ENSG00000123136DDX39A100100.000ENSCANG00000037031-100100.000Colobus_angolensis_palliatus
ENSG00000123136DDX39A10098.913ENSCANG00000034172-10096.721Colobus_angolensis_palliatus
ENSG00000123136DDX39A10097.222ENSCGRG00001001611Ddx3910096.721Cricetulus_griseus_chok1gshd
ENSG00000123136DDX39A10097.222ENSCGRG00000014915Ddx3910096.721Cricetulus_griseus_crigri
ENSG00000123136DDX39A10088.525ENSCSEG00000003434ddx39aa10088.525Cynoglossus_semilaevis
ENSG00000123136DDX39A10089.696ENSCSEG00000015474DDX39A9989.696Cynoglossus_semilaevis
ENSG00000123136DDX39A10084.259ENSCVAG00000005146-9498.039Cyprinodon_variegatus
ENSG00000123136DDX39A10089.461ENSCVAG00000007477DDX39A10089.461Cyprinodon_variegatus
ENSG00000123136DDX39A10091.101ENSDARG00000006225ddx39aa10091.101Danio_rerio
ENSG00000123136DDX39A10091.803ENSDARG00000015111ddx39ab10091.803Danio_rerio
ENSG00000123136DDX39A10094.565ENSDNOG00000049340DDX39A9177.000Dasypus_novemcinctus
ENSG00000123136DDX39A10096.487ENSDORG00000013041Ddx3910096.487Dipodomys_ordii
ENSG00000123136DDX39A9982.824FBgn0014189Hel25E9982.824Drosophila_melanogaster
ENSG00000123136DDX39A10093.519ENSETEG00000016559DDX39A9981.991Echinops_telfairi
ENSG00000123136DDX39A10089.486ENSEBUG00000010042ddx39aa9889.252Eptatretus_burgeri
ENSG00000123136DDX39A10097.658ENSEASG00005015272DDX39A10097.658Equus_asinus_asinus
ENSG00000123136DDX39A10097.658ENSECAG00000040285DDX39A10097.658Equus_caballus
ENSG00000123136DDX39A9990.995ENSEEUG00000015035DDX39A10090.995Erinaceus_europaeus
ENSG00000123136DDX39A10091.101ENSELUG00000010581DDX39A10090.632Esox_lucius
ENSG00000123136DDX39A10091.101ENSELUG00000006779-9190.995Esox_lucius
ENSG00000123136DDX39A10097.892ENSFCAG00000013488DDX39A10097.892Felis_catus
ENSG00000123136DDX39A10096.956ENSFDAG00000014649DDX39A10096.956Fukomys_damarensis
ENSG00000123136DDX39A10089.953ENSFHEG00000009716-10089.461Fundulus_heteroclitus
ENSG00000123136DDX39A10090.187ENSFHEG00000002643ddx39aa10089.930Fundulus_heteroclitus
ENSG00000123136DDX39A9390.977ENSGMOG00000011287-9789.336Gadus_morhua
ENSG00000123136DDX39A9990.758ENSGMOG00000014316DDX39A9990.758Gadus_morhua
ENSG00000123136DDX39A10085.321ENSGAFG00000014768-10083.372Gambusia_affinis
ENSG00000123136DDX39A10089.953ENSGAFG00000010170ddx39aa10089.696Gambusia_affinis
ENSG00000123136DDX39A10089.930ENSGACG00000006096DDX39A10089.930Gasterosteus_aculeatus
ENSG00000123136DDX39A10090.187ENSGACG00000019335ddx39aa10089.930Gasterosteus_aculeatus
ENSG00000123136DDX39A10093.911ENSGAGG00000007527DDX39A10093.911Gopherus_agassizii
ENSG00000123136DDX39A100100.000ENSGGOG00000005414DDX39A100100.000Gorilla_gorilla
ENSG00000123136DDX39A10090.421ENSHBUG00000020257DDX39A10089.930Haplochromis_burtoni
ENSG00000123136DDX39A10089.953ENSHBUG00000003748ddx39aa10089.696Haplochromis_burtoni
ENSG00000123136DDX39A10096.253ENSHGLG00000018263DDX39A10096.253Heterocephalus_glaber_female
ENSG00000123136DDX39A9991.943ENSHGLG00100007165DDX39A9391.943Heterocephalus_glaber_male
ENSG00000123136DDX39A10088.290ENSHCOG00000018674ddx39aa10088.290Hippocampus_comes
ENSG00000123136DDX39A10087.822ENSHCOG00000009111-10087.822Hippocampus_comes
ENSG00000123136DDX39A10091.335ENSIPUG00000021552ddx39aa10091.335Ictalurus_punctatus
ENSG00000123136DDX39A10091.101ENSIPUG00000021341DDX39A10091.101Ictalurus_punctatus
ENSG00000123136DDX39A10097.892ENSSTOG00000013762DDX39A10097.892Ictidomys_tridecemlineatus
ENSG00000123136DDX39A9983.688ENSJJAG00000017826-9683.688Jaculus_jaculus
ENSG00000123136DDX39A10096.019ENSJJAG00000004337-10096.019Jaculus_jaculus
ENSG00000123136DDX39A10090.421ENSKMAG00000000831-10090.164Kryptolebias_marmoratus
ENSG00000123136DDX39A9989.647ENSKMAG00000011231DDX39A9689.151Kryptolebias_marmoratus
ENSG00000123136DDX39A10088.525ENSLBEG00000002817DDX39A9588.525Labrus_bergylta
ENSG00000123136DDX39A10088.525ENSLBEG00000025618-10088.525Labrus_bergylta
ENSG00000123136DDX39A10092.740ENSLACG00000015063DDX39A10092.506Latimeria_chalumnae
ENSG00000123136DDX39A10092.272ENSLOCG00000006534DDX39A10092.272Lepisosteus_oculatus
ENSG00000123136DDX39A10096.956ENSLAFG00000022777DDX39A10096.956Loxodonta_africana
ENSG00000123136DDX39A100100.000ENSMFAG00000044174DDX39A100100.000Macaca_fascicularis
ENSG00000123136DDX39A100100.000ENSMMUG00000005723DDX39A100100.000Macaca_mulatta
ENSG00000123136DDX39A100100.000ENSMNEG00000044292DDX39A100100.000Macaca_nemestrina
ENSG00000123136DDX39A100100.000ENSMLEG00000007602DDX39A100100.000Mandrillus_leucophaeus
ENSG00000123136DDX39A10090.867ENSMAMG00000000971ddx39aa10090.867Mastacembelus_armatus
ENSG00000123136DDX39A10090.398ENSMAMG00000009916DDX39A10090.398Mastacembelus_armatus
ENSG00000123136DDX39A10090.421ENSMZEG00005002864DDX39A10089.930Maylandia_zebra
ENSG00000123136DDX39A10089.953ENSMZEG00005023935ddx39aa10089.696Maylandia_zebra
ENSG00000123136DDX39A10097.222ENSMAUG00000008459Ddx3910096.721Mesocricetus_auratus
ENSG00000123136DDX39A10097.892ENSMICG00000015325DDX39A10097.892Microcebus_murinus
ENSG00000123136DDX39A10097.222ENSMOCG00000016890Ddx399296.682Microtus_ochrogaster
ENSG00000123136DDX39A10088.525ENSMMOG00000006328DDX39A10088.525Mola_mola
ENSG00000123136DDX39A10090.867ENSMMOG00000008895-10090.867Mola_mola
ENSG00000123136DDX39A10095.316ENSMODG00000002448DDX39A8895.316Monodelphis_domestica
ENSG00000123136DDX39A10090.398ENSMALG00000002697DDX39A10090.398Monopterus_albus
ENSG00000123136DDX39A10090.867ENSMALG00000022576ddx39aa10090.867Monopterus_albus
ENSG00000123136DDX39A10097.222MGP_CAROLIEiJ_G0031277Ddx3910097.190Mus_caroli
ENSG00000123136DDX39A10097.222ENSMUSG00000005481Ddx3910097.190Mus_musculus
ENSG00000123136DDX39A10097.222MGP_PahariEiJ_G0022883Ddx3910097.190Mus_pahari
ENSG00000123136DDX39A10097.222MGP_SPRETEiJ_G0032396Ddx3910097.190Mus_spretus
ENSG00000123136DDX39A10097.190ENSMPUG00000003051DDX39A10097.190Mustela_putorius_furo
ENSG00000123136DDX39A10093.846ENSMLUG00000028448-9994.601Myotis_lucifugus
ENSG00000123136DDX39A10091.667ENSMLUG00000029622-9990.164Myotis_lucifugus
ENSG00000123136DDX39A10091.200ENSMLUG00000000939-10090.632Myotis_lucifugus
ENSG00000123136DDX39A10097.424ENSMLUG00000009280-9897.424Myotis_lucifugus
ENSG00000123136DDX39A10092.000ENSMLUG00000026217-9992.723Myotis_lucifugus
ENSG00000123136DDX39A9693.478ENSMLUG00000013597-9983.726Myotis_lucifugus
ENSG00000123136DDX39A10096.487ENSNGAG00000010734Ddx3910096.487Nannospalax_galili
ENSG00000123136DDX39A10089.953ENSNBRG00000001661ddx39aa10089.696Neolamprologus_brichardi
ENSG00000123136DDX39A10090.421ENSNBRG00000010679DDX39A10089.930Neolamprologus_brichardi
ENSG00000123136DDX39A100100.000ENSNLEG00000013515DDX39A10092.974Nomascus_leucogenys
ENSG00000123136DDX39A10091.667ENSMEUG00000005450DDX39A10081.991Notamacropus_eugenii
ENSG00000123136DDX39A9891.489ENSODEG00000017817-10089.461Octodon_degus
ENSG00000123136DDX39A10094.614ENSODEG00000009068-10094.614Octodon_degus
ENSG00000123136DDX39A9682.609ENSODEG00000001453-10077.315Octodon_degus
ENSG00000123136DDX39A10095.785ENSODEG00000019523-10095.785Octodon_degus
ENSG00000123136DDX39A10089.953ENSONIG00000018177ddx39aa10089.696Oreochromis_niloticus
ENSG00000123136DDX39A10090.421ENSONIG00000008122DDX39A10089.930Oreochromis_niloticus
ENSG00000123136DDX39A9684.783ENSOANG00000005137DDX39A9577.857Ornithorhynchus_anatinus
ENSG00000123136DDX39A9676.087ENSOCUG00000002496DDX39A10069.252Oryctolagus_cuniculus
ENSG00000123136DDX39A10089.953ENSORLG00000000279ddx39aa10089.696Oryzias_latipes
ENSG00000123136DDX39A10089.227ENSORLG00000010565DDX39A10089.227Oryzias_latipes
ENSG00000123136DDX39A10089.953ENSORLG00020019315ddx39aa10089.696Oryzias_latipes_hni
ENSG00000123136DDX39A10089.227ENSORLG00020004181DDX39A10089.227Oryzias_latipes_hni
ENSG00000123136DDX39A10089.227ENSORLG00015000447-10089.227Oryzias_latipes_hsok
ENSG00000123136DDX39A10089.953ENSORLG00015019274ddx39aa10089.696Oryzias_latipes_hsok
ENSG00000123136DDX39A10089.227ENSOMEG00000009789-10089.227Oryzias_melastigma
ENSG00000123136DDX39A10089.720ENSOMEG00000010444ddx39aa10089.461Oryzias_melastigma
ENSG00000123136DDX39A10090.000ENSOGAG00000029626-9988.028Otolemur_garnettii
ENSG00000123136DDX39A9689.130ENSOGAG00000025638-9986.461Otolemur_garnettii
ENSG00000123136DDX39A10097.892ENSOGAG00000010280-10097.892Otolemur_garnettii
ENSG00000123136DDX39A10096.721ENSOARG00000005744DDX39A9196.721Ovis_aries
ENSG00000123136DDX39A100100.000ENSPPAG00000040065DDX39A100100.000Pan_paniscus
ENSG00000123136DDX39A10097.892ENSPPRG00000003506DDX39A10097.892Panthera_pardus
ENSG00000123136DDX39A10097.892ENSPTIG00000017287DDX39A10097.892Panthera_tigris_altaica
ENSG00000123136DDX39A100100.000ENSPTRG00000010590DDX39A100100.000Pan_troglodytes
ENSG00000123136DDX39A100100.000ENSPTRG00000042673-100100.000Pan_troglodytes
ENSG00000123136DDX39A100100.000ENSPANG00000015036DDX39A100100.000Papio_anubis
ENSG00000123136DDX39A10092.290ENSPKIG00000006284DDX39A10091.569Paramormyrops_kingsleyae
ENSG00000123136DDX39A10092.037ENSPKIG00000007272-10092.037Paramormyrops_kingsleyae
ENSG00000123136DDX39A9191.954ENSPSIG00000011417DDX39A10096.129Pelodiscus_sinensis
ENSG00000123136DDX39A9989.623ENSPMGG00000021765-9789.623Periophthalmus_magnuspinnatus
ENSG00000123136DDX39A10090.654ENSPMGG00000016520DDX39A10090.164Periophthalmus_magnuspinnatus
ENSG00000123136DDX39A10087.963ENSPEMG00000014184-9981.560Peromyscus_maniculatus_bairdii
ENSG00000123136DDX39A10096.296ENSPEMG00000017767-10096.253Peromyscus_maniculatus_bairdii
ENSG00000123136DDX39A10085.385ENSPMAG00000009017ddx39aa10082.751Petromyzon_marinus
ENSG00000123136DDX39A10095.550ENSPCIG00000029788DDX39A10095.550Phascolarctos_cinereus
ENSG00000123136DDX39A10089.953ENSPFOG00000010070DDX39A10089.461Poecilia_formosa
ENSG00000123136DDX39A10089.720ENSPFOG00000000914ddx39aa10089.461Poecilia_formosa
ENSG00000123136DDX39A10089.953ENSPLAG00000009821DDX39A10089.461Poecilia_latipinna
ENSG00000123136DDX39A10089.720ENSPLAG00000008645-10089.461Poecilia_latipinna
ENSG00000123136DDX39A10089.720ENSPMEG00000021471-10089.461Poecilia_mexicana
ENSG00000123136DDX39A10089.720ENSPMEG00000010187DDX39A10089.227Poecilia_mexicana
ENSG00000123136DDX39A10090.187ENSPREG00000017406ddx39aa10089.930Poecilia_reticulata
ENSG00000123136DDX39A10089.720ENSPREG00000013989DDX39A10089.227Poecilia_reticulata
ENSG00000123136DDX39A100100.000ENSPPYG00000009642DDX39A100100.000Pongo_abelii
ENSG00000123136DDX39A10094.444ENSPCAG00000005768DDX39A10077.986Procavia_capensis
ENSG00000123136DDX39A10097.190ENSPCOG00000024047-10097.190Propithecus_coquereli
ENSG00000123136DDX39A10095.370ENSPCOG00000027926-10095.082Propithecus_coquereli
ENSG00000123136DDX39A10097.658ENSPVAG00000006950DDX39A10097.658Pteropus_vampyrus
ENSG00000123136DDX39A10089.953ENSPNYG00000016438-10089.696Pundamilia_nyererei
ENSG00000123136DDX39A10090.421ENSPNYG00000001498DDX39A10089.930Pundamilia_nyererei
ENSG00000123136DDX39A10091.803ENSPNAG00000014271DDX39A10091.803Pygocentrus_nattereri
ENSG00000123136DDX39A10090.164ENSPNAG00000022623-10090.164Pygocentrus_nattereri
ENSG00000123136DDX39A10096.721ENSRNOG00000004373Ddx39a10096.721Rattus_norvegicus
ENSG00000123136DDX39A100100.000ENSRBIG00000036352DDX39A100100.000Rhinopithecus_bieti
ENSG00000123136DDX39A100100.000ENSRROG00000027985DDX39A100100.000Rhinopithecus_roxellana
ENSG00000123136DDX39A10098.595ENSSBOG00000034939DDX39A10098.595Saimiri_boliviensis_boliviensis
ENSG00000123136DDX39A10095.785ENSSHAG00000005494DDX39A10095.785Sarcophilus_harrisii
ENSG00000123136DDX39A10091.335ENSSFOG00015005701DDX39A10091.335Scleropages_formosus
ENSG00000123136DDX39A10092.272ENSSFOG00015007928ddx39a10092.272Scleropages_formosus
ENSG00000123136DDX39A10090.398ENSSMAG00000002831DDX39A10090.398Scophthalmus_maximus
ENSG00000123136DDX39A10089.696ENSSMAG00000016567ddx39aa10089.696Scophthalmus_maximus
ENSG00000123136DDX39A10091.355ENSSDUG00000020224ddx39aa10090.867Seriola_dumerili
ENSG00000123136DDX39A10084.259ENSSDUG00000023694-10077.344Seriola_dumerili
ENSG00000123136DDX39A9689.130ENSSDUG00000009075DDX39A10093.064Seriola_dumerili
ENSG00000123136DDX39A9689.130ENSSLDG00000002882-10092.775Seriola_lalandi_dorsalis
ENSG00000123136DDX39A10090.632ENSSLDG00000017643DDX39A10090.632Seriola_lalandi_dorsalis
ENSG00000123136DDX39A10087.156ENSSLDG00000010812-8882.906Seriola_lalandi_dorsalis
ENSG00000123136DDX39A9469.327ENSSLDG00000006386-9669.849Seriola_lalandi_dorsalis
ENSG00000123136DDX39A10090.398ENSSPAG00000019372DDX39A10090.398Stegastes_partitus
ENSG00000123136DDX39A10090.398ENSSPAG00000006186-10090.398Stegastes_partitus
ENSG00000123136DDX39A10083.206ENSTRUG00000019985-9983.173Takifugu_rubripes
ENSG00000123136DDX39A9780.645ENSTRUG00000000807-9473.900Takifugu_rubripes
ENSG00000123136DDX39A10091.121ENSTRUG00000022930DDX39A10090.632Takifugu_rubripes
ENSG00000123136DDX39A10096.956ENSTTRG00000007931DDX39A10096.956Tursiops_truncatus
ENSG00000123136DDX39A10097.658ENSUAMG00000020022DDX39A10097.658Ursus_americanus
ENSG00000123136DDX39A10097.917ENSUMAG00000004317DDX39A9997.658Ursus_maritimus
ENSG00000123136DDX39A10097.892ENSVVUG00000026939DDX39A10097.892Vulpes_vulpes
ENSG00000123136DDX39A10090.164ENSXETG00000020607ddx39a9990.164Xenopus_tropicalis
ENSG00000123136DDX39A10089.227ENSXCOG00000015586DDX39A10089.227Xiphophorus_couchianus
ENSG00000123136DDX39A10089.953ENSXMAG00000006547ddx39aa10089.696Xiphophorus_maculatus
ENSG00000123136DDX39A10089.720ENSXMAG00000008939DDX39A10089.227Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome15047853.IGIProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0004386helicase activity-IEAFunction
GO:0005515protein binding14667819.15047853.16189514.21044950.21859714.23652018.25416956.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus21859714.IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005737cytoplasm21859714.IDAComponent
GO:0006405RNA export from nucleus-TASProcess
GO:0006406mRNA export from nucleus15047853.IGIProcess
GO:0016020membrane19946888.HDAComponent
GO:0016607nuclear speck-IDAComponent
GO:0016887ATPase activity20844015.EXPFunction
GO:0031124mRNA 3'-end processing-TASProcess
GO:0042802identical protein binding25416956.IPIFunction
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