EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
19136632The tumor suppressor Cdc73 functionally associates with CPSF and CstF 3' mRNA processing factors.Proc Natl Acad Sci U S A2009 Jan 20Rozenblatt-Rosen Odoi: 10.1073/pnas.0812023106

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr29440545Missense_MutationnovelS272L0.31
BLCAchr29433948Splice_SitenovelX201_splice0.31
BLCAchr29430848SilentnovelY103Y0.45
BLCAchr29428802Missense_MutationnovelL30I0.52
BLCAchr29440539Missense_MutationnovelY270C0.32
BLCAchr29432541Silentrs761040737T124T0.15
BLCAchr29441885Missense_MutationnovelG335A0.27
BLCAchr29436225Silentrs554338304G208G0.29
BLCAchr29443638Missense_MutationNAR407C0.34CPSF73-100_C
BLCAchr29441827Missense_MutationNAH316Y0.48
BLCAchr29440645Missense_MutationnovelF305L0.23
BRCAchr29430828Missense_MutationNAH97D0.18
BRCAchr29471389Missense_MutationnovelL635I0.08
BRCAchr29472931Missense_MutationNAE657Q0.37
BRCAchr29467720Missense_MutationNAK600N0.36
BRCAchr29430878Splice_RegionnovelV113V0.08
BRCAchr29430004In_Frame_DelNAL68del0.12
BRCAchr29456949Missense_MutationNAL540F0.16
BRCAchr29456983Frame_Shift_DelNAN553Ifs*40.3
CESCchr294730423'UTRnovel0.2
CESCchr29433878Missense_Mutationrs759928669Y176C0.35
CESCchr29428788Missense_MutationnovelR25I0.23
CESCchr29428815Missense_MutationNAG34E0.3
CESCchr29440543SilentnovelA271A0.31
CESCchr29448222Missense_MutationnovelE423K0.17CPSF73-100_C
COADchr29471394Silentrs762972969S636S0.35
COADchr29429925Splice_Regionrs139906430L39L0.28
COADchr29432682Silentrs773798533G171G0.44
COADchr29432579Missense_MutationNAT137I0.24
COADchr29455752Missense_MutationNAL533W0.11
COADchr29430760Missense_MutationnovelL74S0.27
ESCAchr29433909Nonsense_MutationnovelH187Lfs*90.36
ESCAchr29443517Missense_MutationnovelH366Q0.2
GBMchr29459564Missense_MutationnovelD578Y0.52
GBMchr29440500Missense_MutationnovelW257L0.07
GBMchr29423806SilentnovelQ11Q0.22
GBMchr29472961Nonsense_MutationnovelE667*0.27
HNSCchr29440618SilentnovelQ296Q0.17
HNSCchr29436251Missense_MutationnovelE217G0.27
HNSCchr29441932Missense_MutationnovelG351S0.3
KIRCchr29440601Missense_MutationNAD291N0.27
KIRCchr29448312Missense_MutationNAA453T0.28
KIRPchr29423804Missense_MutationnovelQ11E0.41
KIRPchr29430860In_Frame_DelnovelS108_D109del0.34
LGGchr29433898Missense_MutationnovelQ183K0.4
LGGchr29467775Nonsense_MutationnovelQ619*0.07
LGGchr29430873Missense_MutationnovelK112E0.46
LIHCchr29433902Missense_MutationNAE184G0.3
LIHCchr29472994Missense_MutationnovelE678K0.41
LUADchr29430872SilentNAV111V0.33
LUADchr29448236Missense_MutationnovelL427F0.07CPSF73-100_C
LUADchr29432664SilentnovelF165F0.12
LUADchr29448300Missense_Mutationrs757160812R449W0.21
LUSCchr29443523Missense_MutationnovelM368I0.29
LUSCchr29441934SilentNAG351G0.12
LUSCchr29455715Missense_MutationnovelG521C0.05
LUSCchr29455716Missense_MutationnovelG521V0.06
LUSCchr29432562SilentnovelS131S0.26
LUSCchr29430794Missense_MutationnovelQ85H0.08
LUSCchr29448253Missense_MutationNAR433Q0.28CPSF73-100_C
LUSCchr29443646Missense_MutationnovelL409F0.14CPSF73-100_C
OVchr29441892SilentnovelS337S0.06
OVchr29428763Splice_SitenovelX18_splice0.04
OVchr29436293Missense_MutationnovelN231I0.05
OVchr29471412Missense_MutationNAK642N0.43
PRADchr29455720SilentNAP522P0.11
READchr29448300Missense_Mutationrs757160812R449W0.41
READchr29452965Missense_MutationnovelG483V0.31
READchr29441953Missense_MutationnovelC358G0.2
SARCchr29423920Intronnovel0.23
SARCchr29456951Missense_MutationnovelE541G0.09
SARCchr29467790Intronnovel0.26
SKCMchr29467734Missense_MutationNAL605S0.38
SKCMchr29436338Missense_MutationNAA246D0.1
SKCMchr29429941Missense_MutationnovelP45S0.38
SKCMchr29443575Missense_MutationnovelM386L0.29CPSF73-100_C
SKCMchr29455719Missense_MutationNAP522L0.28
SKCMchr29430755SilentNAF72F0.35
SKCMchr29432602Missense_MutationnovelE145K0.17
SKCMchr294237565'UTRrs1921125950.23
STADchr29440610Missense_MutationNAR294C0.15
STADchr29471394Silentrs762972969S636S0.12
STADchr29441864Missense_MutationNAS328Y0.16
THCAchr294730473'UTRnovel0.11
THCAchr29430864Missense_MutationNAD109N0.34
UCECchr294730873'UTRrs7578707520.27
UCECchr29456982Frame_Shift_InsnovelN553Kfs*210.35
UCECchr294730823'UTRnovel0.38
UCECchr29457018SilentnovelV563V0.39
UCECchr29430775Missense_MutationnovelA79D0.41
UCECchr29441945Missense_MutationnovelA355V0.31
UCECchr29436289Missense_MutationnovelV230I0.11
UCECchr29472949Missense_MutationnovelE663K0.31
UCECchr29441909Missense_MutationNAS343I0.14
UCECchr29473003Missense_MutationnovelT681S0.04
UCECchr29440514Nonsense_MutationNAE262*0.13
UCECchr29471384Missense_MutationNAS633Y0.25
UCECchr29430872SilentNAV111V0.12
UCECchr29441845Missense_MutationNAP322S0.42
UCECchr29452980Missense_MutationnovelR488I0.34
UCECchr29429963Missense_MutationnovelA52D0.29
UCECchr29453011Silentrs141972024C498C0.44
UCECchr29436286Missense_Mutationrs779316073I229V0.37
UCECchr294730873'UTRnovel0.26
UCECchr29436263Missense_MutationnovelR221I0.45
UCECchr29432683Missense_Mutationrs763418256V172M0.44
UCECchr29452922Missense_MutationnovelF469V0.33
UCECchr29471361SilentnovelD625D0.33
UCECchr29433904Missense_MutationnovelD185Y0.51
UCECchr29453012Missense_Mutationrs765101532D499N0.55
UCECchr29423825Splice_SitenovelX17_splice0.12
UCECchr29471395Missense_Mutationrs199631426V637I0.25
UCECchr29440583Missense_MutationnovelY285H0.33
UCECchr29448252Nonsense_Mutationrs199913516R433*0.4CPSF73-100_C
UCECchr29433919Missense_MutationnovelA190T0.15
UCECchr29440548Missense_MutationnovelS273Y0.36
UCECchr29440548Missense_MutationnovelS273Y0.42
UCECchr29429925Splice_Regionrs139906430L39L0.41
UCECchr29455701Missense_MutationnovelA516V0.09
UCECchr29471393Missense_MutationnovelS636N0.33

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCAAMP0.30640.033813
CESCAMP0.23390.099937
KIRPDEL0.02780.08832
LUSCDEL0.06590.20634
OVDEL0.14510.087942
PAADDEL0.09240.2014
TGCTAMP0.280.0050216
UCECDEL0.0390.18809

Survival Analysis
CancerP-value Q-value
THYM0.0075

Kaplan-Meier Survival Analysis

KIRC0.0038

Kaplan-Meier Survival Analysis

MESO0.0041

Kaplan-Meier Survival Analysis

ACC0.016

Kaplan-Meier Survival Analysis

LUSC0.012

Kaplan-Meier Survival Analysis

KIRP0.013

Kaplan-Meier Survival Analysis

PCPG0.046

Kaplan-Meier Survival Analysis

BLCA0.028

Kaplan-Meier Survival Analysis

UCEC0.0079

Kaplan-Meier Survival Analysis

GBM0.05

Kaplan-Meier Survival Analysis

LIHC0.0001

Kaplan-Meier Survival Analysis

LUAD0.042

Kaplan-Meier Survival Analysis

UVM0.024

Kaplan-Meier Survival Analysis

OV0.011

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000119203 (Gene tree)
Gene ID
51692
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
49,574 bases
Position
chr2:9,423,537-9,473,110
Accession
2326
RBP type
canonical RBP
Summary
This gene encodes a member of the metallo-beta-lactamase family. The encoded protein is a 73kDa subunit of the cleavage and polyadenylation specificity factor and functions as an endonuclease that recognizes the pre-mRNA 3'-cleavage site AAUAAA prior to polyadenylation. It also cleaves after the pre-mRNA sequence ACCCA during histone 3'-end pre-mRNA processing. [provided by RefSeq, Oct 2012]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000418957CPSF73-100_CPF11718.89.3e-5411
ENSP00000238112CPSF73-100_CPF11718.81.1e-5311
ENSP00000418957Beta-CaspPF10996.81.7e-3311
ENSP00000238112Beta-CaspPF10996.81.9e-3311
ENSP00000238112Lactamase_BPF00753.274.3e-1811
ENSP00000418957Lactamase_BPF00753.279.5e-1511
ENSP00000419744Lactamase_BPF00753.279.1e-1111
ENSP00000418957RMMBLPF07521.124.5e-2111
ENSP00000238112RMMBLPF07521.125e-2111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
17128255Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease.Nature2006 Dec 14Mandel CR-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000475482CPSF3-203871-ENSP00000419744136 (aa)-C9JZH6
ENST00000489403CPSF3-204688--- (aa)--
ENST00000460593CPSF3-2023157-ENSP00000418957647 (aa)-G5E9W3
ENST00000238112CPSF3-2012345-ENSP00000238112684 (aa)-Q9UKF6
ENST00000489629CPSF3-205547--- (aa)--
Gene Model
Click here to download ENSG00000119203's gene model file
Pathways
Pathway IDPathway NameSource
hsa03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000119203's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000119203CPSF39837.857ENSG00000127054INTS119941.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000119203CPSF3100100.000ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSG00000119203CPSF310098.529ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSG00000119203CPSF3100100.000ENSAMEG00000008493CPSF310099.415Ailuropoda_melanoleuca
ENSG00000119203CPSF39786.508ENSACIG00000023663CPSF39986.508Amphilophus_citrinellus
ENSG00000119203CPSF39782.803ENSACIG00000009846cpsf39982.803Amphilophus_citrinellus
ENSG00000119203CPSF3100100.000ENSAOCG00000010077CPSF39887.941Amphiprion_ocellaris
ENSG00000119203CPSF310098.529ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSG00000119203CPSF310098.529ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSG00000119203CPSF3100100.000ENSAPEG00000021167CPSF39887.941Amphiprion_percula
ENSG00000119203CPSF3100100.000ENSATEG00000014525CPSF39883.235Anabas_testudineus
ENSG00000119203CPSF310098.529ENSATEG00000003959cpsf39885.420Anabas_testudineus
ENSG00000119203CPSF3100100.000ENSAPLG00000006941CPSF39895.238Anas_platyrhynchos
ENSG00000119203CPSF39893.071ENSACAG00000001759CPSF39993.071Anolis_carolinensis
ENSG00000119203CPSF3100100.000ENSANAG00000031254CPSF310093.129Aotus_nancymaae
ENSG00000119203CPSF310098.529ENSACLG00000014484cpsf39985.714Astatotilapia_calliptera
ENSG00000119203CPSF39786.349ENSACLG00000018846CPSF39986.349Astatotilapia_calliptera
ENSG00000119203CPSF3100100.000ENSAMXG00000004786cpsf39888.235Astyanax_mexicanus
ENSG00000119203CPSF3100100.000ENSBTAG00000019735CPSF310099.561Bos_taurus
ENSG00000119203CPSF310069.565WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSG00000119203CPSF3100100.000ENSCJAG00000006276CPSF310099.415Callithrix_jacchus
ENSG00000119203CPSF3100100.000ENSCAFG00000003375CPSF39599.415Canis_familiaris
ENSG00000119203CPSF3100100.000ENSCAFG00020026799CPSF310099.838Canis_lupus_dingo
ENSG00000119203CPSF35797.403ENSCHIG00000009354-9998.230Capra_hircus
ENSG00000119203CPSF3100100.000ENSCHIG00000013973CPSF310099.561Capra_hircus
ENSG00000119203CPSF3100100.000ENSTSYG00000002967CPSF310099.708Carlito_syrichta
ENSG00000119203CPSF3100100.000ENSCAPG00000013851CPSF310097.901Cavia_aperea
ENSG00000119203CPSF3100100.000ENSCPOG00000011299CPSF310097.953Cavia_porcellus
ENSG00000119203CPSF3100100.000ENSCCAG00000036730CPSF310099.561Cebus_capucinus
ENSG00000119203CPSF3100100.000ENSCATG00000014770CPSF39999.828Cercocebus_atys
ENSG00000119203CPSF3100100.000ENSCLAG00000002727CPSF310097.515Chinchilla_lanigera
ENSG00000119203CPSF3100100.000ENSCSAG00000007125CPSF310091.959Chlorocebus_sabaeus
ENSG00000119203CPSF386100.000ENSCHOG00000000180CPSF38572.105Choloepus_hoffmanni
ENSG00000119203CPSF3100100.000ENSCPBG00000014074CPSF39995.455Chrysemys_picta_bellii
ENSG00000119203CPSF310078.676ENSCING00000007214-9868.129Ciona_intestinalis
ENSG00000119203CPSF3100100.000ENSCANG00000034435CPSF310086.550Colobus_angolensis_palliatus
ENSG00000119203CPSF3100100.000ENSCGRG00001013134Cpsf310098.830Cricetulus_griseus_chok1gshd
ENSG00000119203CPSF3100100.000ENSCGRG00000018319Cpsf310098.830Cricetulus_griseus_crigri
ENSG00000119203CPSF310099.265ENSCSEG00000002021CPSF39986.553Cynoglossus_semilaevis
ENSG00000119203CPSF310099.265ENSCVAG00000015067CPSF39888.235Cyprinodon_variegatus
ENSG00000119203CPSF36092.683ENSCVAG00000022058-8694.783Cyprinodon_variegatus
ENSG00000119203CPSF3100100.000ENSDARG00000027649cpsf39888.971Danio_rerio
ENSG00000119203CPSF310097.794ENSDNOG00000008940CPSF39597.664Dasypus_novemcinctus
ENSG00000119203CPSF3100100.000ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSG00000119203CPSF310080.147FBgn0261065Cpsf739867.305Drosophila_melanogaster
ENSG00000119203CPSF389100.000ENSETEG00000003893CPSF310085.561Echinops_telfairi
ENSG00000119203CPSF310092.647ENSEBUG00000009018cpsf39878.797Eptatretus_burgeri
ENSG00000119203CPSF3100100.000ENSEASG00005003970CPSF310099.415Equus_asinus_asinus
ENSG00000119203CPSF3100100.000ENSECAG00000019911CPSF310099.415Equus_caballus
ENSG00000119203CPSF310083.918ENSEEUG00000015422CPSF310083.918Erinaceus_europaeus
ENSG00000119203CPSF3100100.000ENSELUG00000013775cpsf39888.088Esox_lucius
ENSG00000119203CPSF3100100.000ENSFCAG00000007852CPSF310099.561Felis_catus
ENSG00000119203CPSF3100100.000ENSFALG00000006572CPSF310095.518Ficedula_albicollis
ENSG00000119203CPSF3100100.000ENSFDAG00000006317CPSF39997.361Fukomys_damarensis
ENSG00000119203CPSF36368.780ENSFHEG00000012186CPSF39968.780Fundulus_heteroclitus
ENSG00000119203CPSF310098.529ENSFHEG00000014774cpsf39885.125Fundulus_heteroclitus
ENSG00000119203CPSF36093.902ENSFHEG00000012215-6094.828Fundulus_heteroclitus
ENSG00000119203CPSF310099.265ENSGMOG00000003157cpsf39886.618Gadus_morhua
ENSG00000119203CPSF3100100.000ENSGALG00000016424CPSF39995.154Gallus_gallus
ENSG00000119203CPSF39782.830ENSGAFG00000019449cpsf39982.830Gambusia_affinis
ENSG00000119203CPSF310099.265ENSGAFG00000008016CPSF39888.071Gambusia_affinis
ENSG00000119203CPSF37293.362ENSGAGG00000025583CPSF39393.362Gopherus_agassizii
ENSG00000119203CPSF3100100.000ENSGGOG00000001757CPSF310099.843Gorilla_gorilla
ENSG00000119203CPSF36381.481ENSHBUG00000014332CPSF39981.481Haplochromis_burtoni
ENSG00000119203CPSF310098.529ENSHBUG00000001188cpsf39985.609Haplochromis_burtoni
ENSG00000119203CPSF3100100.000ENSHGLG00000000666CPSF39996.930Heterocephalus_glaber_female
ENSG00000119203CPSF3100100.000ENSHGLG00100007765CPSF39996.930Heterocephalus_glaber_male
ENSG00000119203CPSF3100100.000ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSG00000119203CPSF310098.529ENSHCOG00000007251cpsf39984.897Hippocampus_comes
ENSG00000119203CPSF310099.265ENSIPUG00000023488cpsf39887.059Ictalurus_punctatus
ENSG00000119203CPSF3100100.000ENSSTOG00000004476CPSF310098.830Ictidomys_tridecemlineatus
ENSG00000119203CPSF3100100.000ENSJJAG00000023415Cpsf310097.807Jaculus_jaculus
ENSG00000119203CPSF310097.794ENSKMAG00000002806cpsf39884.831Kryptolebias_marmoratus
ENSG00000119203CPSF310099.265ENSKMAG00000007317CPSF39887.647Kryptolebias_marmoratus
ENSG00000119203CPSF310098.529ENSLBEG00000020569cpsf39478.971Labrus_bergylta
ENSG00000119203CPSF3100100.000ENSLBEG00000013492CPSF39889.043Labrus_bergylta
ENSG00000119203CPSF35879.625ENSLBEG00000015018-9979.625Labrus_bergylta
ENSG00000119203CPSF3100100.000ENSLACG00000008308CPSF39883.947Latimeria_chalumnae
ENSG00000119203CPSF3100100.000ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSG00000119203CPSF310099.265ENSLAFG00000009467CPSF310097.647Loxodonta_africana
ENSG00000119203CPSF3100100.000ENSMFAG00000001339CPSF310099.708Macaca_fascicularis
ENSG00000119203CPSF3100100.000ENSMMUG00000018038CPSF310099.691Macaca_mulatta
ENSG00000119203CPSF3100100.000ENSMNEG00000039447CPSF310086.988Macaca_nemestrina
ENSG00000119203CPSF3100100.000ENSMLEG00000026825CPSF310099.854Mandrillus_leucophaeus
ENSG00000119203CPSF39785.285ENSMAMG00000008835CPSF39985.285Mastacembelus_armatus
ENSG00000119203CPSF310099.265ENSMAMG00000003076cpsf39885.714Mastacembelus_armatus
ENSG00000119203CPSF310098.529ENSMZEG00005014358cpsf39985.609Maylandia_zebra
ENSG00000119203CPSF3100100.000ENSMZEG00005006258CPSF39888.529Maylandia_zebra
ENSG00000119203CPSF3100100.000ENSMGAG00000013995CPSF310095.202Meleagris_gallopavo
ENSG00000119203CPSF35897.074ENSMAUG00000000166Cpsf310097.074Mesocricetus_auratus
ENSG00000119203CPSF3100100.000ENSMICG00000002363CPSF310094.006Microcebus_murinus
ENSG00000119203CPSF3100100.000ENSMOCG00000020067Cpsf310094.152Microtus_ochrogaster
ENSG00000119203CPSF310099.265ENSMMOG00000018212CPSF39882.326Mola_mola
ENSG00000119203CPSF37585.294ENSMMOG00000011923CPSF38477.857Mola_mola
ENSG00000119203CPSF3100100.000ENSMODG00000014703CPSF310096.093Monodelphis_domestica
ENSG00000119203CPSF39190.698ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSG00000119203CPSF310098.529ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSG00000119203CPSF3100100.000MGP_CAROLIEiJ_G0017640Cpsf310098.538Mus_caroli
ENSG00000119203CPSF3100100.000ENSMUSG00000054309Cpsf310098.538Mus_musculus
ENSG00000119203CPSF3100100.000MGP_PahariEiJ_G0029397Cpsf310098.392Mus_pahari
ENSG00000119203CPSF3100100.000MGP_SPRETEiJ_G0018481Cpsf310098.538Mus_spretus
ENSG00000119203CPSF3100100.000ENSMPUG00000013213CPSF310098.977Mustela_putorius_furo
ENSG00000119203CPSF3100100.000ENSMLUG00000010636CPSF310098.394Myotis_lucifugus
ENSG00000119203CPSF3100100.000ENSNGAG00000019836Cpsf310098.684Nannospalax_galili
ENSG00000119203CPSF39786.349ENSNBRG00000010525CPSF39986.349Neolamprologus_brichardi
ENSG00000119203CPSF310098.529ENSNBRG00000004770cpsf39985.169Neolamprologus_brichardi
ENSG00000119203CPSF3100100.000ENSNLEG00000013359CPSF310099.708Nomascus_leucogenys
ENSG00000119203CPSF39966.718ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSG00000119203CPSF3100100.000ENSOPRG00000008902CPSF310089.620Ochotona_princeps
ENSG00000119203CPSF3100100.000ENSODEG00000003129CPSF310097.076Octodon_degus
ENSG00000119203CPSF310098.529ENSONIG00000018812cpsf39985.756Oreochromis_niloticus
ENSG00000119203CPSF38796.454ENSOANG00000008577CPSF310096.454Ornithorhynchus_anatinus
ENSG00000119203CPSF3100100.000ENSOCUG00000003728CPSF310098.977Oryctolagus_cuniculus
ENSG00000119203CPSF310097.059ENSORLG00000018854cpsf39983.554Oryzias_latipes
ENSG00000119203CPSF310097.059ENSORLG00020013331cpsf39983.554Oryzias_latipes_hni
ENSG00000119203CPSF310097.059ENSORLG00015011017cpsf39983.554Oryzias_latipes_hsok
ENSG00000119203CPSF310096.324ENSOMEG00000010647cpsf39483.700Oryzias_melastigma
ENSG00000119203CPSF310089.620ENSOGAG00000001680CPSF310089.620Otolemur_garnettii
ENSG00000119203CPSF3100100.000ENSOARG00000015073CPSF310099.561Ovis_aries
ENSG00000119203CPSF3100100.000ENSPPAG00000042457CPSF310099.854Pan_paniscus
ENSG00000119203CPSF3100100.000ENSPPRG00000016790CPSF310099.269Panthera_pardus
ENSG00000119203CPSF3100100.000ENSPTIG00000003920CPSF310099.213Panthera_tigris_altaica
ENSG00000119203CPSF3100100.000ENSPTRG00000011638CPSF310099.854Pan_troglodytes
ENSG00000119203CPSF3100100.000ENSPANG00000016798CPSF310099.561Papio_anubis
ENSG00000119203CPSF3100100.000ENSPKIG00000023646cpsf39989.302Paramormyrops_kingsleyae
ENSG00000119203CPSF3100100.000ENSPSIG00000016144CPSF310093.704Pelodiscus_sinensis
ENSG00000119203CPSF36379.259ENSPMGG00000015311CPSF39979.259Periophthalmus_magnuspinnatus
ENSG00000119203CPSF35798.701ENSPMGG00000015314-8398.182Periophthalmus_magnuspinnatus
ENSG00000119203CPSF38690.756ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSG00000119203CPSF3100100.000ENSPEMG00000017668Cpsf310098.538Peromyscus_maniculatus_bairdii
ENSG00000119203CPSF310094.853ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSG00000119203CPSF3100100.000ENSPCIG00000009823CPSF39897.699Phascolarctos_cinereus
ENSG00000119203CPSF310098.529ENSPFOG00000015922cpsf39984.751Poecilia_formosa
ENSG00000119203CPSF310099.265ENSPFOG00000010418-9887.776Poecilia_formosa
ENSG00000119203CPSF35798.701ENSPLAG00000021271-76100.000Poecilia_latipinna
ENSG00000119203CPSF36280.693ENSPLAG00000021300-9980.693Poecilia_latipinna
ENSG00000119203CPSF310098.529ENSPLAG00000000882cpsf39984.751Poecilia_latipinna
ENSG00000119203CPSF310098.529ENSPMEG00000018309cpsf39984.897Poecilia_mexicana
ENSG00000119203CPSF35798.701ENSPMEG00000021545-76100.000Poecilia_mexicana
ENSG00000119203CPSF39882.075ENSPREG00000014875cpsf39982.671Poecilia_reticulata
ENSG00000119203CPSF310099.265ENSPREG00000004482CPSF39882.474Poecilia_reticulata
ENSG00000119203CPSF3100100.000ENSPPYG00000012666CPSF310095.322Pongo_abelii
ENSG00000119203CPSF39999.259ENSPCAG00000015042CPSF310063.748Procavia_capensis
ENSG00000119203CPSF3100100.000ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSG00000119203CPSF3100100.000ENSPVAG00000005324CPSF39999.413Pteropus_vampyrus
ENSG00000119203CPSF38792.500ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSG00000119203CPSF310098.529ENSPNYG00000004405cpsf39985.609Pundamilia_nyererei
ENSG00000119203CPSF3100100.000ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSG00000119203CPSF3100100.000ENSRNOG00000052418Cpsf39998.534Rattus_norvegicus
ENSG00000119203CPSF310099.265ENSRBIG00000041615CPSF39995.209Rhinopithecus_bieti
ENSG00000119203CPSF3100100.000ENSRROG00000033792CPSF310099.854Rhinopithecus_roxellana
ENSG00000119203CPSF310054.861YLR277CYSH19540.671Saccharomyces_cerevisiae
ENSG00000119203CPSF3100100.000ENSSBOG00000027263CPSF310093.478Saimiri_boliviensis_boliviensis
ENSG00000119203CPSF3100100.000ENSSHAG00000007024CPSF310097.807Sarcophilus_harrisii
ENSG00000119203CPSF3100100.000ENSSFOG00015002108cpsf39989.574Scleropages_formosus
ENSG00000119203CPSF3100100.000ENSSMAG00000020534CPSF39587.654Scophthalmus_maximus
ENSG00000119203CPSF3100100.000ENSSDUG00000018498CPSF39888.088Seriola_dumerili
ENSG00000119203CPSF310098.529ENSSDUG00000002828cpsf39685.609Seriola_dumerili
ENSG00000119203CPSF3100100.000ENSSLDG00000005234CPSF39888.088Seriola_lalandi_dorsalis
ENSG00000119203CPSF310098.529ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSG00000119203CPSF310081.433ENSSARG00000005186CPSF310081.433Sorex_araneus
ENSG00000119203CPSF310099.265ENSSPUG00000015525CPSF39792.399Sphenodon_punctatus
ENSG00000119203CPSF310098.529ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSG00000119203CPSF3100100.000ENSSPAG00000002906CPSF39887.794Stegastes_partitus
ENSG00000119203CPSF3100100.000ENSSSCG00000020799CPSF39999.414Sus_scrofa
ENSG00000119203CPSF3100100.000ENSTGUG00000013016CPSF39995.595Taeniopygia_guttata
ENSG00000119203CPSF36272.727ENSTRUG00000013905CPSF39972.727Takifugu_rubripes
ENSG00000119203CPSF310099.265ENSTRUG00000007030cpsf39784.853Takifugu_rubripes
ENSG00000119203CPSF35798.701ENSTRUG00000021819-8597.273Takifugu_rubripes
ENSG00000119203CPSF310085.294ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSG00000119203CPSF3100100.000ENSTTRG00000000861CPSF38898.387Tursiops_truncatus
ENSG00000119203CPSF3100100.000ENSUAMG00000007535CPSF39896.334Ursus_americanus
ENSG00000119203CPSF3100100.000ENSUMAG00000003676CPSF310099.382Ursus_maritimus
ENSG00000119203CPSF3100100.000ENSVPAG00000008041CPSF310095.741Vicugna_pacos
ENSG00000119203CPSF3100100.000ENSVVUG00000002194CPSF310099.415Vulpes_vulpes
ENSG00000119203CPSF3100100.000ENSXETG00000008263cpsf39890.162Xenopus_tropicalis
ENSG00000119203CPSF35798.701ENSXCOG00000003932-7799.091Xiphophorus_couchianus
ENSG00000119203CPSF35779.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSG00000119203CPSF310098.529ENSXCOG00000019695cpsf39985.044Xiphophorus_couchianus
ENSG00000119203CPSF310099.265ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus
ENSG00000119203CPSF310098.529ENSXMAG00000009784cpsf39984.751Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome-TASProcess
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding-ISSFunction
GO:0004521endoribonuclease activity21873635.IBAFunction
GO:0004521endoribonuclease activity-ISSFunction
GO:0005515protein binding18288197.18688255.21102410.IPIFunction
GO:0005654nucleoplasm-TASComponent
GO:0005847mRNA cleavage and polyadenylation specificity factor complex21873635.IBAComponent
GO:0005847mRNA cleavage and polyadenylation specificity factor complex18305108.21102410.IDAComponent
GO:0006369termination of RNA polymerase II transcription-TASProcess
GO:0006378mRNA polyadenylation21873635.IBAProcess
GO:0006379mRNA cleavage8929409.TASProcess
GO:0006398mRNA 3'-end processing by stem-loop binding and cleavage21873635.IBAProcess
GO:0006398mRNA 3'-end processing by stem-loop binding and cleavage18688255.IDAProcess
GO:0006406mRNA export from nucleus-TASProcess
GO:00084095'-3' exonuclease activity21873635.IBAFunction
GO:00084095'-3' exonuclease activity-ISSFunction
GO:0031124mRNA 3'-end processing-TASProcess
GO:0046872metal ion binding-IEAFunction
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic-IEAProcess
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