EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
28618931	Detection of FAM172A expressed in circulating tumor cells is a feasible method to predict high-risk subgroups of colorectal cancer.	Tumour Biol	2017 Jun	Cui CH	doi: 10.1177/1010428317699126.
23314443	FAM172A induces S phase arrest of HepG2 cells via Notch3.	Oncol Rep	2013 Mar	Feng Z	doi: 10.3892/or.2013.2235
26676844	FAM172A modulates apoptosis and proliferation of colon cancer cells via STAT1 binding to its promoter.	Oncol Rep	2016 Mar	Qian K	doi: 10.3892/or.2015.4485

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
ACC	chr5	93776166	Silent	novel	V367V	0.15
BLCA	chr5	94053179	Missense_Mutation	rs546421741	P52L	0.09
BLCA	chr5	93620959	3'UTR	novel		0.38
BLCA	chr5	93784380	Splice_Region	novel		0.18
BLCA	chr5	93958881	Missense_Mutation	novel	H155Y	0.36	Arb2
BLCA	chr5	93620986	3'UTR	novel		0.33
BLCA	chr5	93621124	Missense_Mutation	rs761854218	D372N	0.29
BRCA	chr5	93958847	Missense_Mutation	NA	A166V	0.5	Arb2
BRCA	chr5	93881477	Missense_Mutation	rs200535189	Y260C	0.24	Arb2
BRCA	chr5	93784399	Missense_Mutation	rs758166608	R336Q	0.16	Arb2
BRCA	chr5	94074720	Nonsense_Mutation	novel	*L11Yfs9**	0.11
CESC	chr5	93958956	Missense_Mutation	novel	E130K	0.41	Arb2
CESC	chr5	93881604	Missense_Mutation	NA	D218H	0.63	Arb2
COAD	chr5	93881576	Missense_Mutation	rs373351314	R227Q	0.21	Arb2
COAD	chr5	94074667	Nonsense_Mutation	novel	E29*	0.29
COAD	chr5	93824187	Silent	rs763583872	F289F	0.41
COAD	chr5	93964515	Silent	NA	T106T	0.3
COAD	chr5	94053214	Nonsense_Mutation	novel	I41*	0.07
COAD	chr5	93784477	Frame_Shift_Ins	novel	*V310Afs9**	0.04	Arb2
COAD	chr5	93784479	Missense_Mutation	novel	D309E	0.01	Arb2
GBM	chr5	93881493	Nonsense_Mutation	novel	E255*	0.18	Arb2
GBM	chr5	94074747	Missense_Mutation	novel	S2Y	0.58
HNSC	chr5	93621067	Nonsense_Mutation	novel	E391*	0.16
HNSC	chr5	93824240	Missense_Mutation	novel	I272F	0.46	Arb2
HNSC	chr5	93784400	Nonsense_Mutation	NA	R336*	0.15	Arb2
HNSC	chr5	93958833	Missense_Mutation	NA	I171V	0.19	Arb2
KIRC	chr5	93784483	Missense_Mutation	novel	A308G	0.29	Arb2
KIRC	chr5	94053214	Nonsense_Mutation	novel	R40_I41ins*	0.04
KIRC	chr5	93881388	Intron	novel		0.38
KIRC	chr5	93881390	Intron	novel		0.38
KIRP	chr5	93620892	3'UTR	novel		0.24
KIRP	chr5	93881510	Frame_Shift_Del	novel	*N249Tfs8**	0.41	Arb2
LGG	chr5	94050822	Nonsense_Mutation	novel	L73*	0.47
LGG	chr5	93964460	Missense_Mutation	novel	P125T	0.31	Arb2
LIHC	chr5	93958831	Silent	novel	I171I	0.36
LIHC	chr5	94053214	Nonsense_Mutation	novel	I41*	0.13
LUAD	chr5	93881539	Missense_Mutation	NA	K239N	0.34	Arb2
LUAD	chr5	93824230	Missense_Mutation	novel	W275L	0.21	Arb2
LUAD	chr5	93776193	Missense_Mutation	NA	E358D	0.27
LUAD	chr5	93958910	Missense_Mutation	rs758327052	T145R	0.27	Arb2
LUAD	chr5	93621046	In_Frame_Del	novel	K396_T397del	0.13
LUSC	chr5	94053186	Missense_Mutation	NA	D50N	0.61
LUSC	chr5	94074697	Missense_Mutation	NA	Q19E	0.15
LUSC	chr5	93824198	Missense_Mutation	novel	N286H	0.06	Arb2
MESO	chr5	93620948	3'UTR	novel		0.3
MESO	chr5	93620824	3'UTR	novel		0.52
OV	chr5	93784446	Frame_Shift_Del	novel	*T320Rfs25**	0.19	Arb2
PRAD	chr5	93621085	Missense_Mutation	novel	I385L	0.44
PRAD	chr5	93881524	Silent	novel	Y244Y	0.3
READ	chr5	93824187	Silent	rs763583872	F289F	0.26
READ	chr5	94074695	Missense_Mutation	novel	Q19H	0.39
SKCM	chr5	94053200	Missense_Mutation	novel	E45V	0.62
SKCM	chr5	93881615	Missense_Mutation	novel	Q214L	0.31	Arb2
SKCM	chr5	93958968	Missense_Mutation	novel	V126I	0.36	Arb2
SKCM	chr5	93824187	Silent	rs763583872	F289F	0.3
SKCM	chr5	93881684	Missense_Mutation	NA	G191E	0.4	Arb2
SKCM	chr5	93958936	Silent	NA	F136F	0.34
STAD	chr5	94050787	Missense_Mutation	NA	N85H	0.13
STAD	chr5	93881637	Nonsense_Mutation	NA	E207*	0.1	Arb2
STAD	chr5	93881585	Missense_Mutation	novel	A224E	0.07	Arb2
STAD	chr5	93881468	Splice_Site	novel	X262_splice	0.36
STAD	chr5	93964460	Missense_Mutation	NA	P125S	0.3	Arb2
STAD	chr5	93881529	Missense_Mutation	NA	F243L	0.38	Arb2
STAD	chr5	94074765	5'UTR	novel		0.15
THCA	chr5	93881432	Intron	novel		0.08
THCA	chr5	93881585	Missense_Mutation	novel	A224E	0.06	Arb2
THCA	chr5	93881586	Nonsense_Mutation	novel	A224*	0.06	Arb2
UCEC	chr5	93784405	Missense_Mutation	NA	T334M	0.45	Arb2
UCEC	chr5	93776231	Missense_Mutation	NA	W346R	0.38	Arb2
UCEC	chr5	93958900	Missense_Mutation	NA	Q148H	0.16	Arb2
UCEC	chr5	93881604	Missense_Mutation	NA	D218H	0.13	Arb2
UCEC	chr5	94050762	Missense_Mutation	NA	W93L	0.38
UCEC	chr5	94074644	Splice_Site	NA	X36_splice	0.35
UCEC	chr5	93881493	Nonsense_Mutation	novel	E255*	0.42	Arb2
UCEC	chr5	93958784	Missense_Mutation	novel	A187D	0.4	Arb2
UCEC	chr5	93784405	Missense_Mutation	NA	T334M	0.37	Arb2
UCEC	chr5	93621053	Silent	NA	A395A	0.5
UCEC	chr5	93881537	Missense_Mutation	rs770845342	R240Q	0.44	Arb2
UCEC	chr5	94074655	Missense_Mutation	NA	A33S	0.13
UCEC	chr5	94050787	Missense_Mutation	NA	N85H	0.33
UCEC	chr5	93881436	Intron	novel		0.34
UCEC	chr5	94053186	Frame_Shift_Ins	novel	*D50Rfs2**	0.43
UCEC	chr5	93784494	Missense_Mutation	novel	I304M	0.4	Arb2
UCEC	chr5	93620797	3'UTR	novel		0.38
UCEC	chr5	93964515	Silent	NA	T106T	0.18
UCEC	chr5	94050731	Missense_Mutation	NA	E103D	0.2	Arb2
UCEC	chr5	94050756	Missense_Mutation	novel	Q95R	0.2
UCEC	chr5	93958800	Missense_Mutation	rs771012587	P182S	0.29	Arb2
UCEC	chr5	93958915	Silent	novel	A143A	0.5
UCEC	chr5	93784490	Nonsense_Mutation	novel	R306*	0.4	Arb2
UCEC	chr5	93881538	Nonsense_Mutation	novel	R240*	0.43	Arb2
UCEC	chr5	93620705	3'UTR	novel		0.36
UCEC	chr5	93621030	Missense_Mutation	NA	A403V	0.44
UCEC	chr5	93958955	Nonsense_Mutation	novel	*E130Vfs6**	0.08	Arb2
UCEC	chr5	93620830	3'UTR	novel		0.43
UCEC	chr5	93881565	Missense_Mutation	NA	D231Y	0.29	Arb2
UCEC	chr5	94074655	Missense_Mutation	novel	A33T	0.21
UCEC	chr5	94053181	Silent	novel	E51E	0.47
UCEC	chr5	94053187	Missense_Mutation	NA	K49N	0.3
UCEC	chr5	93776186	Silent	novel	L361L	0.45
UCEC	chr5	93881537	Missense_Mutation	rs770845342	R240Q	0.32	Arb2

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
CHOL	DEL	0.1389	0.16947
COAD	DEL	0.2284	1.1167e-13
HNSC	DEL	0.3621	1.5585e-09
LUAD	DEL	0.3004	7.4776e-05
LUSC	DEL	0.6687	0.002071
MESO	DEL	0.1379	0.20184
STAD	DEL	0.3039	2.8835e-08
THCA	DEL	0.002	0.23456

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.00011	Kaplan-Meier Survival Analysis
STAD	0.018	Kaplan-Meier Survival Analysis
MESO	0.021	Kaplan-Meier Survival Analysis
UCS	0.0017	Kaplan-Meier Survival Analysis
HNSC	0.02	Kaplan-Meier Survival Analysis
SKCM	0.0077	Kaplan-Meier Survival Analysis
BRCA	0.0072	Kaplan-Meier Survival Analysis
KIRP	0.05	Kaplan-Meier Survival Analysis
PAAD	0.0027	Kaplan-Meier Survival Analysis
PCPG	0.045	Kaplan-Meier Survival Analysis
READ	0.018	Kaplan-Meier Survival Analysis
KICH	0.00084	Kaplan-Meier Survival Analysis
GBM	0.049	Kaplan-Meier Survival Analysis
LGG	0.0001	Kaplan-Meier Survival Analysis
THCA	0.021	Kaplan-Meier Survival Analysis
LUAD	0.038	Kaplan-Meier Survival Analysis
OV	0.0072	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

Expression

Transcripts

Gene Model

Phenotype

GWAS

PPI

Ortholog

Gene Ontology

Description

Ensembl ID: ENSG00000113391 (Gene tree)
Gene ID: 83989
Gene Symbol: FAM172A
Alias: DKFZP564D172|Toupee|C5orf21
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Specie: Homo_sapiens
Strand: Minus strand
Length: 493,975 bases
Position: chr5:93,617,725-94,111,699
Accession: 25365
Summary: FAM172A (Family With Sequence Similarity 172 Member A) is a Protein Coding gene. Diseases associated with FAM172A include Charge Syndrome.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000423841	Arb2	PF09757.9	6.1e-09	1	1
ENSP00000379294	Arb2	PF09757.9	9.5e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000395965	FAM172A-201	4312	XM_005272103	ENSP00000379294	416 (aa)	XP_005272160	Q8WUF8
ENST00000504768	FAM172A-203	803	-	-	- (aa)	-	-
ENST00000510445	FAM172A-208	557	-	-	- (aa)	-	-
ENST00000511139	FAM172A-209	310	-	-	- (aa)	-	-
ENST00000505869	FAM172A-204	1387	-	ENSP00000426284	306 (aa)	-	Q8WUF8
ENST00000509163	FAM172A-206	1369	XM_005272110	ENSP00000423841	370 (aa)	XP_005272167	Q8WUF8
ENST00000509739	FAM172A-207	1031	XM_005272108	ENSP00000421834	269 (aa)	XP_005272165	B4DMI0
ENST00000502503	FAM172A-202	1392	-	ENSP00000424097	305 (aa)	-	E9PBM2
ENST00000506398	FAM172A-205	965	-	-	- (aa)	-	-

Gene Model

Click here to download 's gene model file

Phenotype

ensgID	Trait	pValue	Pubmed ID
ENSG00000113391	Respiratory Function Tests	1.49124712248664E-7	17903307
ENSG00000113391	Respiratory Function Tests	1.8826612439496E-8	17903307
ENSG00000113391	Respiratory Function Tests	6.74895090126207E-6	17903307
ENSG00000113391	Body Mass Index	7.22887279638772E-7	17903300
ENSG00000113391	Body Mass Index	1.10469151797701E-5	17903300
ENSG00000113391	Body Weight	2.67278059279839E-6	17903300
ENSG00000113391	Body Weight	5.96812595477305E-6	17903300
ENSG00000113391	Body Weight	1.58845836324054E-7	17903300
ENSG00000113391	Body Weight	8.26936159252969E-6	17903300
ENSG00000113391	Body Weight	3.44588844138233E-6	17903300
ENSG00000113391	Body Weight	3.63822870074558E-7	17903300
ENSG00000113391	Platelet Function Tests	1.9066600E-005	-
ENSG00000113391	Platelet Function Tests	2.7864800E-005	-

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000113391	rs113647342	5	93762365	T	Neuroticism	29255261	z score increase	5.479	EFO_0007660
ENSG00000113391	rs6874223	5	93877763	A	Neuroticism	29255261	z score increase	4.87	EFO_0007660
ENSG00000113391	rs72786644	5	93702893	A	Educational attainment (MTAG)	30038396	[0.0085-0.0151] unit increase	0.0118	EFO_0004784
ENSG00000113391	rs72788321	5	93967339	G	Self-reported math ability	30038396	[0.029-0.052] unit increase	0.0405	EFO_0004875
ENSG00000113391	rs115136616	5	93685410	C	Highest math class taken	30038396	[0.026-0.047] unit decrease	0.0367	EFO_0004875
ENSG00000113391	rs71641008	5	94077633	T	Self-reported math ability (MTAG)	30038396	[0.022-0.041] unit decrease	0.0314	EFO_0004875
ENSG00000113391	rs62366053	5	94053622	?	Reaction time	29844566	[0.0051-0.0119] unit decrease	0.0085001	EFO_0008393
ENSG00000113391	rs12332731	5	93697376	A	Educational attainment (years of education)	30038396	[0.01-0.017] unit increase	0.0135	EFO_0004784
ENSG00000113391	rs55736786	5	93758412	T	Hippocampal tail volume (corrected for total hippocampal volume)	30279459	NR mm3 decrease	8.59	EFO_0009398
ENSG00000113391	rs10061069	5	93735924	G	Depression	30718901	[1.02-1.03]	1.025641	EFO_0003761
ENSG00000113391	rs71641008	5	94077633	?	Aspartate aminotransferase levels in low alcohol consumption	30589442	[0.044-0.109] unit increase	0.0763	EFO_0004736\|EFO_0007878
ENSG00000113391	rs13184801	5	93760836	G	Neuroticism	30643256	[0.0063-0.0132] unit decrease	0.009756338	EFO_0007660
ENSG00000113391	rs13184801	5	93760836	G	Depressive symptoms	30643256	[0.004-0.0085] unit decrease	0.006273017	EFO_0007006
ENSG00000113391	rs10061069	5	93735924	C	Well-being spectrum (multivariate analysis)	30643256	[0.0039-0.0082] unit decrease	0.006036171	EFO_0007869

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000113391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy	Species
ENSG00000113391	FAM172A	83	37.991	ENSAPLG00000011555	-	97	38.961	Anas_platyrhynchos
ENSG00000113391	FAM172A	100	89.873	ENSAPLG00000004055	FAM172A	97	88.366	Anas_platyrhynchos
ENSG00000113391	FAM172A	88	91.139	ENSACAG00000013305	FAM172A	95	89.344	Anolis_carolinensis
ENSG00000113391	FAM172A	90	95.000	ENSANAG00000035869	FAM172A	93	95.455	Aotus_nancymaae
ENSG00000113391	FAM172A	100	98.734	ENSBTAG00000050195	FAM172A	100	97.356	Bos_taurus
ENSG00000113391	FAM172A	100	99.038	ENSCJAG00000010444	FAM172A	100	99.038	Callithrix_jacchus
ENSG00000113391	FAM172A	89	98.378	ENSCAFG00000008064	FAM172A	99	98.378	Canis_familiaris
ENSG00000113391	FAM172A	100	98.734	ENSCAFG00020006210	FAM172A	100	96.875	Canis_lupus_dingo
ENSG00000113391	FAM172A	100	98.734	ENSCHIG00000008440	FAM172A	100	97.115	Capra_hircus
ENSG00000113391	FAM172A	87	96.992	ENSTSYG00000006286	FAM172A	85	96.992	Carlito_syrichta
ENSG00000113391	FAM172A	63	97.500	ENSCAPG00000014103	-	100	97.500	Cavia_aperea
ENSG00000113391	FAM172A	100	98.734	ENSCCAG00000023116	FAM172A	100	98.558	Cebus_capucinus
ENSG00000113391	FAM172A	100	97.468	ENSCLAG00000005472	FAM172A	100	97.468	Chinchilla_lanigera
ENSG00000113391	FAM172A	95	51.852	ENSCPBG00000004402	-	96	44.173	Chrysemys_picta_bellii
ENSG00000113391	FAM172A	94	98.958	ENSCANG00000040412	FAM172A	98	98.958	Colobus_angolensis_palliatus
ENSG00000113391	FAM172A	100	97.596	ENSDNOG00000004689	FAM172A	100	97.596	Dasypus_novemcinctus
ENSG00000113391	FAM172A	100	92.459	ENSDORG00000013558	Fam172a	97	92.459	Dipodomys_ordii
ENSG00000113391	FAM172A	89	40.000	ENSEBUG00000016097	-	62	40.000	Eptatretus_burgeri
ENSG00000113391	FAM172A	100	96.203	ENSECAG00000018274	FAM172A	97	94.568	Equus_caballus
ENSG00000113391	FAM172A	91	95.522	ENSEEUG00000002887	FAM172A	97	84.444	Erinaceus_europaeus
ENSG00000113391	FAM172A	99	68.901	ENSELUG00000017647	fam172a	96	69.287	Esox_lucius
ENSG00000113391	FAM172A	100	98.734	ENSFCAG00000025443	FAM172A	100	97.837	Felis_catus
ENSG00000113391	FAM172A	96	44.011	ENSFALG00000006501	-	100	44.011	Ficedula_albicollis
ENSG00000113391	FAM172A	88	89.538	ENSFALG00000009072	FAM172A	95	90.141	Ficedula_albicollis
ENSG00000113391	FAM172A	100	89.459	ENSGALG00000014661	FAM172A	97	89.109	Gallus_gallus
ENSG00000113391	FAM172A	92	56.923	ENSGAGG00000022828	-	93	45.609	Gopherus_agassizii
ENSG00000113391	FAM172A	100	93.671	ENSGAGG00000003839	FAM172A	97	92.079	Gopherus_agassizii
ENSG00000113391	FAM172A	100	99.279	ENSGGOG00000010296	FAM172A	100	99.279	Gorilla_gorilla
ENSG00000113391	FAM172A	100	96.203	ENSHGLG00000011178	FAM172A	100	96.203	Heterocephalus_glaber_female
ENSG00000113391	FAM172A	89	97.019	ENSHGLG00100013340	FAM172A	100	96.203	Heterocephalus_glaber_male
ENSG00000113391	FAM172A	100	98.734	ENSSTOG00000009918	FAM172A	100	97.356	Ictidomys_tridecemlineatus
ENSG00000113391	FAM172A	98	47.671	ENSLACG00000001532	si:ch73-41e3.7	100	46.950	Latimeria_chalumnae
ENSG00000113391	FAM172A	100	75.871	ENSLOCG00000001629	fam172a	97	77.037	Lepisosteus_oculatus
ENSG00000113391	FAM172A	94	98.611	ENSMFAG00000001171	FAM172A	98	98.611	Macaca_fascicularis
ENSG00000113391	FAM172A	100	99.459	ENSMNEG00000039938	FAM172A	98	98.611	Macaca_nemestrina
ENSG00000113391	FAM172A	57	43.949	ENSMGAG00000016079	-	74	43.949	Meleagris_gallopavo
ENSG00000113391	FAM172A	100	98.734	ENSMICG00000030403	FAM172A	100	98.558	Microcebus_murinus
ENSG00000113391	FAM172A	100	96.203	ENSMOCG00000003613	Fam172a	100	94.054	Microtus_ochrogaster
ENSG00000113391	FAM172A	100	92.405	ENSMODG00000020131	FAM172A	97	90.594	Monodelphis_domestica
ENSG00000113391	FAM172A	100	93.791	MGP_PahariEiJ_G0015818	Fam172a	100	94.937	Mus_pahari
ENSG00000113391	FAM172A	100	100.000	ENSNGAG00000019570	Fam172a	100	97.568	Nannospalax_galili
ENSG00000113391	FAM172A	98	96.990	ENSNLEG00000013903	FAM172A	98	96.990	Nomascus_leucogenys
ENSG00000113391	FAM172A	88	90.741	ENSOANG00000011068	FAM172A	95	91.292	Ornithorhynchus_anatinus
ENSG00000113391	FAM172A	97	97.772	ENSOCUG00000007299	FAM172A	96	97.531	Oryctolagus_cuniculus
ENSG00000113391	FAM172A	100	96.394	ENSOGAG00000015189	FAM172A	100	96.394	Otolemur_garnettii
ENSG00000113391	FAM172A	89	98.734	ENSOARG00000016711	FAM172A	85	94.355	Ovis_aries
ENSG00000113391	FAM172A	96	97.619	ENSPPAG00000030542	FAM172A	99	97.619	Pan_paniscus
ENSG00000113391	FAM172A	100	98.734	ENSPPRG00000006653	FAM172A	100	97.837	Panthera_pardus
ENSG00000113391	FAM172A	100	98.734	ENSPTIG00000012681	FAM172A	100	97.837	Panthera_tigris_altaica
ENSG00000113391	FAM172A	96	97.619	ENSPTRG00000017074	FAM172A	99	97.619	Pan_troglodytes
ENSG00000113391	FAM172A	94	98.611	ENSPANG00000011687	FAM172A	98	98.611	Papio_anubis
ENSG00000113391	FAM172A	97	74.167	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSG00000113391	FAM172A	59	93.750	ENSPSIG00000010144	-	100	93.750	Pelodiscus_sinensis
ENSG00000113391	FAM172A	100	97.468	ENSPEMG00000009604	-	100	97.468	Peromyscus_maniculatus_bairdii
ENSG00000113391	FAM172A	100	93.671	ENSPCIG00000028612	FAM172A	97	90.594	Phascolarctos_cinereus
ENSG00000113391	FAM172A	100	90.335	ENSPCOG00000024072	FAM172A	96	95.378	Propithecus_coquereli
ENSG00000113391	FAM172A	89	94.465	ENSRNOG00000013844	Fam172a	100	94.465	Rattus_norvegicus
ENSG00000113391	FAM172A	81	78.027	ENSRBIG00000028680	-	79	93.820	Rhinopithecus_bieti
ENSG00000113391	FAM172A	94	98.958	ENSRROG00000023807	FAM172A	98	98.958	Rhinopithecus_roxellana
ENSG00000113391	FAM172A	100	98.798	ENSSBOG00000019860	FAM172A	100	98.798	Saimiri_boliviensis_boliviensis
ENSG00000113391	FAM172A	100	93.671	ENSSHAG00000013743	FAM172A	97	90.594	Sarcophilus_harrisii
ENSG00000113391	FAM172A	100	88.608	ENSSPUG00000008161	FAM172A	97	88.614	Sphenodon_punctatus
ENSG00000113391	FAM172A	100	98.734	ENSSSCG00000027608	FAM172A	100	98.108	Sus_scrofa
ENSG00000113391	FAM172A	100	88.608	ENSTGUG00000000715	FAM172A	100	87.368	Taeniopygia_guttata
ENSG00000113391	FAM172A	88	62.295	ENSTGUG00000013623	-	100	47.321	Taeniopygia_guttata
ENSG00000113391	FAM172A	77	79.747	ENSTNIG00000009902	fam172a	99	59.036	Tetraodon_nigroviridis
ENSG00000113391	FAM172A	100	94.595	ENSTTRG00000001521	FAM172A	97	94.321	Tursiops_truncatus
ENSG00000113391	FAM172A	100	98.734	ENSUMAG00000005442	FAM172A	100	98.317	Ursus_maritimus
ENSG00000113391	FAM172A	100	98.734	ENSVVUG00000022112	FAM172A	100	96.875	Vulpes_vulpes
ENSG00000113391	FAM172A	97	43.443	ENSXETG00000033027	-	99	42.708	Xenopus_tropicalis
ENSG00000113391	FAM172A	100	82.210	ENSXETG00000011592	fam172a	96	82.512	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISS	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005783	endoplasmic reticulum	-	IDA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0014032	neural crest cell development	-	ISS	Process
GO:0031048	chromatin silencing by small RNA	21873635.	IBA	Process
GO:0035197	siRNA binding	21873635.	IBA	Function

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

Expression

Transcripts

Gene Model

Phenotype

GWAS

PPI

Ortholog

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.