EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr10	101782335	Missense_Mutation	NA	F114C	0.23	Nucleoplasmin
BLCA	chr10	101783277	Missense_Mutation	rs773885926	F38L	0.42	Nucleoplasmin
BLCA	chr10	101782581	Missense_Mutation	novel	G74A	0.16	Nucleoplasmin
BLCA	chr10	101783355	Missense_Mutation	novel	L12F	0.15
BRCA	chr10	101782334	Missense_Mutation	novel	F114L	0.25	Nucleoplasmin
BRCA	chr10	101782484	Silent	NA	Q106Q	0.62
CHOL	chr10	101782483	Missense_Mutation	novel	P107S	0.58	Nucleoplasmin
COAD	chr10	101783277	Missense_Mutation	rs773885926	F38L	0.31	Nucleoplasmin
COAD	chr10	101782586	Silent	rs769914016	T72T	0.23
COAD	chr10	101783337	Silent	novel	T18T	0.33
COAD	chr10	101782487	Silent	novel	C105C	0.12
GBM	chr10	101781563	3'UTR	novel		0.2
HNSC	chr10	101782585	Missense_Mutation	rs745777576	E73K	0.07	Nucleoplasmin
HNSC	chr10	101782282	Missense_Mutation	novel	R132G	0.28	Nucleoplasmin
LAML	chr10	101782282	Missense_Mutation	NA	R132W	0.07	Nucleoplasmin
LAML	chr10	101781819	Nonsense_Mutation	novel	E152*	0.03
LUAD	chr10	101782850	Missense_Mutation	NA	A65S	0.31	Nucleoplasmin
OV	chr10	101782507	Missense_Mutation	rs750952873	A99T	0.32	Nucleoplasmin
PAAD	chr10	101782482	Missense_Mutation	novel	P107L	0.18	Nucleoplasmin
PRAD	chr10	101781794	Missense_Mutation	novel	E160G	0.14
SKCM	chr10	101781594	3'UTR	novel		0.32
SKCM	chr10	101782327	Nonsense_Mutation	novel	Q117*	0.14	Nucleoplasmin
STAD	chr10	101783351	Nonsense_Mutation	NA	Q14*	0.37
STAD	chr10	101781764	Missense_Mutation	rs774468944	P170L	0.27
THCA	chr10	101782308	Missense_Mutation	NA	R123L	0.2	Nucleoplasmin
UCEC	chr10	101782520	Silent	rs775197678	I94I	0.33
UCEC	chr10	101781610	3'UTR	rs529747995		0.43
UCEC	chr10	101782532	Silent	rs752340132	D90D	0.26
UCEC	chr10	101781745	Frame_Shift_Ins	novel	*R177Qfs21**	0.4
UCEC	chr10	101781793	Missense_Mutation	novel	E160D	0.16
UCEC	chr10	101781799	Silent	novel	S158S	0.13
UCEC	chr10	101782299	Missense_Mutation	rs771883465	S126L	0.32	Nucleoplasmin
UCEC	chr10	101782520	Silent	rs775197678	I94I	0.37
UCEC	chr10	101781565	3'UTR	novel		0.23
UCEC	chr10	101782351	Missense_Mutation	novel	L109I	0.24	Nucleoplasmin
UCEC	chr10	101782905	Silent	novel	H46H	0.21
UCEC	chr10	101781851	Missense_Mutation	novel	T141M	0.42

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
ACC	DEL	0.1	0.19593
CHOL	DEL	0.2222	0.048655
COAD	DEL	0.1774	9.4741e-07
MESO	DEL	0.2759	0.00015289
OV	DEL	0.3886	5.3759e-12
PAAD	DEL	0.1359	0.169
READ	DEL	0.2424	0.014135
THCA	DEL	0.014	0.011063
THYM	DEL	0.0325	0.10563
UCS	DEL	0.3036	0.1218

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.00011	Kaplan-Meier Survival Analysis
STAD	0.038	Kaplan-Meier Survival Analysis
MESO	0.0003	Kaplan-Meier Survival Analysis
ACC	0.00013	Kaplan-Meier Survival Analysis
HNSC	0.00072	Kaplan-Meier Survival Analysis
SKCM	0.0084	Kaplan-Meier Survival Analysis
PRAD	0.02	Kaplan-Meier Survival Analysis
KIRP	0.0011	Kaplan-Meier Survival Analysis
PAAD	0.022	Kaplan-Meier Survival Analysis
LIHC	0.018	Kaplan-Meier Survival Analysis
LGG	0.00013	Kaplan-Meier Survival Analysis
LUAD	0.021	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000107833 (Gene tree)
Gene ID: 10360
Gene Symbol: NPM3
Alias: N
Full Name: nucleophosmin/nucleoplasmin 3
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 2,089 bases
Position: chr10:101,781,325-101,783,413
Accession: 7931
RBP type: canonical RBP
Summary: The protein encoded by this gene is related to the nuclear chaperone phosphoproteins, nucleoplasmin and nucleophosmin. This protein is strongly expressed in diverse cell types where it localizes primarily to the nucleus. Based on its similarity to nucleoplasmin and nucleophosmin, this protein likely functions as a molecular chaperone in the cell nucleus. [provided by RefSeq, Oct 2008]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000359128	Nucleoplasmin	PF03066.15	4.6e-35	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
22362753	Function of homo- and hetero-oligomers of human nucleoplasmin/nucleophosmin family proteins NPM1, NPM2 and NPM3 during sperm chromatin remodeling.	Nucleic Acids Res	2012 Jun	Okuwaki M	doi: 10.1093/nar/gks162

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000474993	NPM3-204	755	-	-	- (aa)	-	-
ENST00000468544	NPM3-203	393	-	-	- (aa)	-	-
ENST00000462391	NPM3-202	481	-	-	- (aa)	-	-
ENST00000370110	NPM3-201	877	-	ENSP00000359128	178 (aa)	-	O75607

Gene Model

Click here to download ENSG00000107833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000107833's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000107833	NPM3	70	38.889	ENSG00000158806	NPM2	84	36.145
ENSG00000107833	NPM3	62	44.545	ENSG00000181163	NPM1	51	45.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000107833	NPM3	79	50.350	ENSAPOG00000013083	npm3	66	52.778	Acanthochromis_polyacanthus
ENSG00000107833	NPM3	100	96.067	ENSAMEG00000017639	-	100	96.067	Ailuropoda_melanoleuca
ENSG00000107833	NPM3	85	72.549	ENSAMEG00000019414	-	90	72.549	Ailuropoda_melanoleuca
ENSG00000107833	NPM3	61	50.909	ENSACIG00000022586	npm3	67	51.852	Amphilophus_citrinellus
ENSG00000107833	NPM3	79	48.936	ENSAOCG00000009376	npm3	87	48.936	Amphiprion_ocellaris
ENSG00000107833	NPM3	79	48.936	ENSAPEG00000015863	npm3	87	48.936	Amphiprion_percula
ENSG00000107833	NPM3	79	49.296	ENSATEG00000022752	npm3	87	49.296	Anabas_testudineus
ENSG00000107833	NPM3	76	65.926	ENSAPLG00000010935	NPM3	86	65.926	Anas_platyrhynchos
ENSG00000107833	NPM3	58	66.019	ENSACAG00000011936	NPM3	85	62.143	Anolis_carolinensis
ENSG00000107833	NPM3	100	97.191	ENSANAG00000027082	-	100	97.191	Aotus_nancymaae
ENSG00000107833	NPM3	83	92.517	ENSANAG00000023832	-	63	92.537	Aotus_nancymaae
ENSG00000107833	NPM3	95	74.556	ENSANAG00000023070	-	80	83.582	Aotus_nancymaae
ENSG00000107833	NPM3	100	80.337	ENSANAG00000033290	-	94	77.381	Aotus_nancymaae
ENSG00000107833	NPM3	79	53.191	ENSACLG00000007854	npm3	87	53.191	Astatotilapia_calliptera
ENSG00000107833	NPM3	60	55.660	ENSAMXG00000039828	npm3	56	55.046	Astyanax_mexicanus
ENSG00000107833	NPM3	99	90.395	ENSBTAG00000016335	NPM3	94	88.623	Bos_taurus
ENSG00000107833	NPM3	100	94.944	ENSCJAG00000017650	NPM3	94	95.238	Callithrix_jacchus
ENSG00000107833	NPM3	94	94.611	ENSCAFG00000009919	NPM3	87	92.090	Canis_familiaris
ENSG00000107833	NPM3	94	94.611	ENSCAFG00020009185	NPM3	99	92.090	Canis_lupus_dingo
ENSG00000107833	NPM3	99	61.364	ENSCHIG00000016052	-	92	62.048	Capra_hircus
ENSG00000107833	NPM3	99	90.395	ENSCHIG00000024055	-	94	88.623	Capra_hircus
ENSG00000107833	NPM3	94	53.892	ENSCAPG00000016606	NPM3	94	51.190	Cavia_aperea
ENSG00000107833	NPM3	94	89.286	ENSCPOG00000006301	NPM3	95	87.500	Cavia_porcellus
ENSG00000107833	NPM3	94	95.238	ENSCCAG00000031043	-	94	95.238	Cebus_capucinus
ENSG00000107833	NPM3	100	78.652	ENSCCAG00000029457	-	94	77.976	Cebus_capucinus
ENSG00000107833	NPM3	100	99.438	ENSCATG00000013755	NPM3	100	99.438	Cercocebus_atys
ENSG00000107833	NPM3	100	99.438	ENSCSAG00000005509	NPM3	100	99.438	Chlorocebus_sabaeus
ENSG00000107833	NPM3	94	61.905	ENSCPBG00000003817	NPM3	97	61.677	Chrysemys_picta_bellii
ENSG00000107833	NPM3	100	97.753	ENSCANG00000020300	NPM3	100	97.753	Colobus_angolensis_palliatus
ENSG00000107833	NPM3	100	82.584	ENSCGRG00001013345	Npm3	94	80.357	Cricetulus_griseus_chok1gshd
ENSG00000107833	NPM3	78	79.856	ENSCGRG00000015351	Npm3	85	76.596	Cricetulus_griseus_crigri
ENSG00000107833	NPM3	79	46.622	ENSCSEG00000007944	npm3	92	46.154	Cynoglossus_semilaevis
ENSG00000107833	NPM3	64	49.573	ENSCVAG00000003305	npm3	67	51.351	Cyprinodon_variegatus
ENSG00000107833	NPM3	61	53.704	ENSDARG00000103594	npm3	66	53.704	Danio_rerio
ENSG00000107833	NPM3	100	88.202	ENSDORG00000003491	Npm3	94	86.905	Dipodomys_ordii
ENSG00000107833	NPM3	94	86.228	ENSETEG00000006307	NPM3	94	86.228	Echinops_telfairi
ENSG00000107833	NPM3	94	92.857	ENSEASG00005008834	NPM3	100	91.011	Equus_asinus_asinus
ENSG00000107833	NPM3	94	92.857	ENSECAG00000007524	NPM3	100	91.011	Equus_caballus
ENSG00000107833	NPM3	63	53.571	ENSELUG00000021730	npm3	83	47.518	Esox_lucius
ENSG00000107833	NPM3	100	91.011	ENSFCAG00000007178	NPM3	100	91.011	Felis_catus
ENSG00000107833	NPM3	65	66.087	ENSFALG00000008586	NPM3	91	60.403	Ficedula_albicollis
ENSG00000107833	NPM3	62	86.486	ENSFDAG00000016537	NPM3	100	83.784	Fukomys_damarensis
ENSG00000107833	NPM3	61	51.852	ENSFHEG00000003983	npm3	69	51.852	Fundulus_heteroclitus
ENSG00000107833	NPM3	79	47.518	ENSGMOG00000004317	npm3	94	46.667	Gadus_morhua
ENSG00000107833	NPM3	78	64.029	ENSGALG00000032329	NPM3	93	63.309	Gallus_gallus
ENSG00000107833	NPM3	60	53.271	ENSGAFG00000009135	npm3	94	48.684	Gambusia_affinis
ENSG00000107833	NPM3	60	54.717	ENSGACG00000007294	npm3	62	54.717	Gasterosteus_aculeatus
ENSG00000107833	NPM3	78	69.565	ENSGAGG00000004081	NPM3	88	63.750	Gopherus_agassizii
ENSG00000107833	NPM3	100	99.438	ENSGGOG00000027500	NPM3	100	99.438	Gorilla_gorilla
ENSG00000107833	NPM3	61	52.778	ENSHBUG00000023704	npm3	68	52.778	Haplochromis_burtoni
ENSG00000107833	NPM3	95	85.207	ENSHGLG00000019118	NPM3	100	82.022	Heterocephalus_glaber_female
ENSG00000107833	NPM3	78	85.507	ENSHGLG00100010926	NPM3	100	82.609	Heterocephalus_glaber_male
ENSG00000107833	NPM3	61	48.624	ENSHCOG00000019322	npm3	88	45.270	Hippocampus_comes
ENSG00000107833	NPM3	79	51.064	ENSIPUG00000008204	npm3	87	48.936	Ictalurus_punctatus
ENSG00000107833	NPM3	99	89.831	ENSSTOG00000022621	NPM3	94	89.820	Ictidomys_tridecemlineatus
ENSG00000107833	NPM3	100	91.011	ENSJJAG00000018907	Npm3	94	88.690	Jaculus_jaculus
ENSG00000107833	NPM3	61	54.630	ENSKMAG00000020800	npm3	75	47.368	Kryptolebias_marmoratus
ENSG00000107833	NPM3	79	47.518	ENSLBEG00000015651	npm3	87	47.518	Labrus_bergylta
ENSG00000107833	NPM3	93	47.093	ENSLOCG00000000705	-	96	46.951	Lepisosteus_oculatus
ENSG00000107833	NPM3	94	92.857	ENSLAFG00000023022	NPM3	95	91.667	Loxodonta_africana
ENSG00000107833	NPM3	100	99.438	ENSMFAG00000041878	NPM3	100	99.438	Macaca_fascicularis
ENSG00000107833	NPM3	100	98.876	ENSMMUG00000015774	NPM3	100	98.876	Macaca_mulatta
ENSG00000107833	NPM3	100	99.438	ENSMNEG00000039999	NPM3	100	99.438	Macaca_nemestrina
ENSG00000107833	NPM3	100	99.438	ENSMLEG00000038129	NPM3	100	99.438	Mandrillus_leucophaeus
ENSG00000107833	NPM3	81	48.630	ENSMAMG00000002698	npm3	90	48.630	Mastacembelus_armatus
ENSG00000107833	NPM3	63	52.679	ENSMZEG00005003091	npm3	67	53.704	Maylandia_zebra
ENSG00000107833	NPM3	94	83.929	ENSMAUG00000015218	Npm3	94	82.143	Mesocricetus_auratus
ENSG00000107833	NPM3	94	94.048	ENSMICG00000044119	NPM3	94	91.667	Microcebus_murinus
ENSG00000107833	NPM3	94	84.431	ENSMOCG00000013601	Npm3	99	84.181	Microtus_ochrogaster
ENSG00000107833	NPM3	79	47.518	ENSMMOG00000010681	npm3	87	47.518	Mola_mola
ENSG00000107833	NPM3	98	69.101	ENSMODG00000011689	NPM3	94	70.000	Monodelphis_domestica
ENSG00000107833	NPM3	66	47.899	ENSMALG00000016787	npm3	91	46.104	Monopterus_albus
ENSG00000107833	NPM3	94	83.929	MGP_CAROLIEiJ_G0023020	Npm3	100	82.022	Mus_caroli
ENSG00000107833	NPM3	94	85.119	ENSMUSG00000056209	Npm3	100	82.584	Mus_musculus
ENSG00000107833	NPM3	100	84.831	MGP_PahariEiJ_G0014510	Npm3	94	83.333	Mus_pahari
ENSG00000107833	NPM3	100	85.393	MGP_SPRETEiJ_G0023941	Npm3	94	82.143	Mus_spretus
ENSG00000107833	NPM3	94	92.857	ENSMPUG00000016894	NPM3	94	91.071	Mustela_putorius_furo
ENSG00000107833	NPM3	97	87.861	ENSMLUG00000004961	NPM3	92	89.634	Myotis_lucifugus
ENSG00000107833	NPM3	94	86.826	ENSNGAG00000022833	-	94	85.030	Nannospalax_galili
ENSG00000107833	NPM3	99	77.966	ENSNGAG00000000155	-	93	76.647	Nannospalax_galili
ENSG00000107833	NPM3	100	99.438	ENSNLEG00000029281	-	100	99.438	Nomascus_leucogenys
ENSG00000107833	NPM3	100	96.629	ENSNLEG00000018637	-	100	96.629	Nomascus_leucogenys
ENSG00000107833	NPM3	77	78.102	ENSMEUG00000003465	-	93	80.620	Notamacropus_eugenii
ENSG00000107833	NPM3	56	72.727	ENSMEUG00000002619	-	100	72.727	Notamacropus_eugenii
ENSG00000107833	NPM3	56	69.697	ENSMEUG00000004931	-	100	69.697	Notamacropus_eugenii
ENSG00000107833	NPM3	93	89.157	ENSOPRG00000009229	NPM3	93	86.747	Ochotona_princeps
ENSG00000107833	NPM3	97	84.971	ENSODEG00000006704	NPM3	96	81.548	Octodon_degus
ENSG00000107833	NPM3	64	47.458	ENSONIG00000009513	npm3	67	52.727	Oreochromis_niloticus
ENSG00000107833	NPM3	94	92.814	ENSOCUG00000016819	NPM3	94	91.018	Oryctolagus_cuniculus
ENSG00000107833	NPM3	61	52.778	ENSORLG00000008492	npm3	75	53.774	Oryzias_latipes
ENSG00000107833	NPM3	61	52.778	ENSORLG00020002450	npm3	70	53.774	Oryzias_latipes_hni
ENSG00000107833	NPM3	79	51.773	ENSORLG00015006856	npm3	68	52.778	Oryzias_latipes_hsok
ENSG00000107833	NPM3	65	49.138	ENSOMEG00000002666	npm3	72	49.138	Oryzias_melastigma
ENSG00000107833	NPM3	100	91.573	ENSOGAG00000010001	NPM3	94	89.286	Otolemur_garnettii
ENSG00000107833	NPM3	99	89.831	ENSOARG00000016916	NPM3	94	88.623	Ovis_aries
ENSG00000107833	NPM3	100	100.000	ENSPPAG00000040517	NPM3	100	100.000	Pan_paniscus
ENSG00000107833	NPM3	94	92.262	ENSPPRG00000012611	-	100	90.449	Panthera_pardus
ENSG00000107833	NPM3	94	91.071	ENSPTIG00000005390	NPM3	100	91.011	Panthera_tigris_altaica
ENSG00000107833	NPM3	100	100.000	ENSPTRG00000002875	NPM3	100	100.000	Pan_troglodytes
ENSG00000107833	NPM3	100	99.438	ENSPANG00000021046	NPM3	100	99.438	Papio_anubis
ENSG00000107833	NPM3	79	40.714	ENSPKIG00000007609	npm3	57	43.396	Paramormyrops_kingsleyae
ENSG00000107833	NPM3	60	56.075	ENSPMGG00000020204	npm3	92	47.020	Periophthalmus_magnuspinnatus
ENSG00000107833	NPM3	94	86.905	ENSPEMG00000007731	Npm3	94	85.119	Peromyscus_maniculatus_bairdii
ENSG00000107833	NPM3	60	54.206	ENSPFOG00000014692	npm3	66	54.206	Poecilia_formosa
ENSG00000107833	NPM3	60	54.206	ENSPLAG00000009956	npm3	66	54.206	Poecilia_latipinna
ENSG00000107833	NPM3	57	54.455	ENSPMEG00000011795	npm3	92	51.449	Poecilia_mexicana
ENSG00000107833	NPM3	60	54.206	ENSPREG00000020765	npm3	89	48.966	Poecilia_reticulata
ENSG00000107833	NPM3	100	98.333	ENSPPYG00000002589	NPM3	87	98.333	Pongo_abelii
ENSG00000107833	NPM3	100	93.820	ENSPCOG00000014704	NPM3	94	91.667	Propithecus_coquereli
ENSG00000107833	NPM3	94	93.452	ENSPVAG00000004038	NPM3	94	91.667	Pteropus_vampyrus
ENSG00000107833	NPM3	79	52.482	ENSPNYG00000009300	npm3	67	52.778	Pundamilia_nyererei
ENSG00000107833	NPM3	62	54.955	ENSPNAG00000014779	npm3	71	54.955	Pygocentrus_nattereri
ENSG00000107833	NPM3	100	82.584	ENSRNOG00000017622	Npm3	94	80.952	Rattus_norvegicus
ENSG00000107833	NPM3	98	79.310	ENSRBIG00000042048	-	90	90.278	Rhinopithecus_bieti
ENSG00000107833	NPM3	100	97.753	ENSRBIG00000039086	-	100	97.753	Rhinopithecus_bieti
ENSG00000107833	NPM3	100	97.753	ENSRROG00000029912	NPM3	100	97.753	Rhinopithecus_roxellana
ENSG00000107833	NPM3	96	96.471	ENSSBOG00000027661	NPM3	100	96.471	Saimiri_boliviensis_boliviensis
ENSG00000107833	NPM3	92	64.072	ENSSHAG00000008567	NPM3	94	63.529	Sarcophilus_harrisii
ENSG00000107833	NPM3	60	50.943	ENSSFOG00015013651	npm3	67	50.467	Scleropages_formosus
ENSG00000107833	NPM3	79	48.227	ENSSMAG00000003907	npm3	87	48.227	Scophthalmus_maximus
ENSG00000107833	NPM3	79	51.064	ENSSDUG00000022843	npm3	87	51.064	Seriola_dumerili
ENSG00000107833	NPM3	79	51.064	ENSSLDG00000002811	npm3	87	51.064	Seriola_lalandi_dorsalis
ENSG00000107833	NPM3	86	63.462	ENSSPUG00000011875	NPM3	96	60.897	Sphenodon_punctatus
ENSG00000107833	NPM3	83	49.660	ENSSPAG00000002553	npm3	91	49.660	Stegastes_partitus
ENSG00000107833	NPM3	99	90.395	ENSSSCG00000010568	NPM3	94	88.623	Sus_scrofa
ENSG00000107833	NPM3	62	68.468	ENSTGUG00000009948	NPM3	83	69.091	Taeniopygia_guttata
ENSG00000107833	NPM3	82	49.315	ENSTRUG00000011661	npm3	90	49.315	Takifugu_rubripes
ENSG00000107833	NPM3	66	51.282	ENSTNIG00000016518	npm3	67	50.862	Tetraodon_nigroviridis
ENSG00000107833	NPM3	100	95.506	ENSUAMG00000024072	NPM3	73	95.506	Ursus_americanus
ENSG00000107833	NPM3	100	95.506	ENSUMAG00000023016	NPM3	73	95.506	Ursus_maritimus
ENSG00000107833	NPM3	94	94.643	ENSVPAG00000003120	NPM3	100	91.573	Vicugna_pacos
ENSG00000107833	NPM3	94	94.611	ENSVVUG00000000945	NPM3	87	92.090	Vulpes_vulpes
ENSG00000107833	NPM3	81	46.341	ENSXETG00000014472	npm3	65	58.929	Xenopus_tropicalis
ENSG00000107833	NPM3	63	52.679	ENSXCOG00000012121	npm3	88	51.701	Xiphophorus_couchianus
ENSG00000107833	NPM3	63	52.679	ENSXMAG00000013473	npm3	88	51.701	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0005515	protein binding	22190034.25416956.	IPI	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	-	IDA	Component
GO:0006338	chromatin remodeling	21873635.	IBA	Process
GO:0006364	rRNA processing	-	IEA	Process
GO:0009303	rRNA transcription	-	IEA	Process
GO:0015629	actin cytoskeleton	-	IDA	Component
GO:0042393	histone binding	21873635.	IBA	Function

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.