EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact
TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1948603781Frame_Shift_DelNAQ297Rfs*60.49
ACCchr1948601214SilentnovelP444P0.09
BLCAchr1948613159Missense_Mutationrs552900271E72K0.18FAM83
BLCAchr1948603836Missense_MutationnovelS278R0.21
BLCAchr1948609978Missense_MutationNAR219Q0.6
BLCAchr1948613159Missense_Mutationrs552900271E72K0.67FAM83
BLCAchr1948603745Missense_MutationNAR309C0.19
BLCAchr1948601228Missense_Mutationrs781707903R440C0.23
BLCAchr1948601229SilentnovelL439L0.24
CESCchr1948603651Missense_MutationnovelR340L0.14
CESCchr1948613247SilentnovelG42G0.12
CESCchr1948603781Frame_Shift_DelNAQ297Rfs*60.32
CESCchr1948601134Frame_Shift_InsnovelR471Pfs*780.33
CESCchr1948603745Frame_Shift_DelnovelR309Afs*460.21
COADchr1948613263Missense_MutationNAA37V0.24FAM83
COADchr1948601288Frame_Shift_Delrs778486601E420Kfs*1210.4
COADchr1948612982Missense_MutationnovelY131N0.33
COADchr1948603844Missense_Mutationrs756248260A276T0.34
COADchr1948609979Missense_Mutationrs757251950R219W0.19
COADchr1948610827SilentNAD162D0.23
COADchr1948603780Frame_Shift_Insrs773971919Q297Pfs*330.38
COADchr1948609949Missense_Mutationrs543968839R229W0.6
COADchr1948601141Missense_MutationnovelA469P0.35
COADchr1948603801Missense_Mutationrs775093735P290L0.27
COADchr1948609988Missense_Mutationrs748353296R216C0.23
COADchr1948603781Frame_Shift_DelNAQ297Rfs*60.48
COADchr1948601315Missense_Mutationrs370573825R411W0.61
COADchr1948603845SilentNAD275D0.37
COADchr1948603730Missense_Mutationrs577301127V314M0.31
COADchr1948609932Silentrs201002687T234T0.38
COADchr1948613195Missense_Mutationrs769111757S60G0.42FAM83
ESCAchr1948609988Missense_Mutationrs748353296R216C0.26
ESCAchr1948609928Missense_Mutationrs200129085R236W0.36
GBMchr1948603875SilentnovelL265L0.13
GBMchr1948613197Missense_MutationnovelL59P0.07FAM83
HNSCchr1948603496Missense_Mutationrs267605566E392K0.3
HNSCchr19486010633'UTRrs2006074340.19
HNSCchr1948601206Missense_MutationnovelR447T0.27
LGGchr1948601199Silentrs374545212F449F0.39
LIHCchr1948601355Missense_MutationnovelW397C0.22
LIHCchr1948601356Missense_MutationnovelW397L0.22
LUADchr1948613244Silentrs201699578A43A0.17
LUSCchr1948603844Missense_Mutationrs756248260A276T0.42
LUSCchr1948613068Missense_MutationnovelP102H0.14
LUSCchr1948603517Missense_MutationnovelG385C0.2
LUSCchr1948603797SilentnovelL291L0.21
OVchr1948613166Silentrs755994276A69A0.54
OVchr1948601117Frame_Shift_Insrs766131786Q477Afs*720.09
PRADchr1948603911Splice_Regionrs762595974S253S0.41
PRADchr19486009533'UTRnovel0.38
PRADchr1948609938Silentrs763535279S232S0.54
READchr1948601315Missense_Mutationrs370573825R411W0.26
SKCMchr1948603797Silentrs369917515L291L0.41
SKCMchr1948613289Silentrs369914216S28S0.5
SKCMchr1948603807Missense_MutationNAS288F0.28
SKCMchr1948603725SilentNAS315S1
SKCMchr1948601135Missense_Mutationrs561108431R471W0.47
SKCMchr1948603903Nonsense_MutationnovelW256*0.25
SKCMchr1948609903Missense_MutationnovelG244D0.35
SKCMchr1948601151Silentrs369505013P465P0.52
SKCMchr1948609888Missense_MutationNAS249L0.8
SKCMchr1948601136SilentNAP470P0.22
SKCMchr1948603792Missense_MutationNAP293L0.39
SKCMchr1948603802Missense_MutationNAP290S0.64
SKCMchr1948603551SilentNAS373S0.37
SKCMchr1948601201Missense_MutationNAF449I0.22
SKCMchr1948603544Missense_MutationNAD376N0.28
SKCMchr1948603784Missense_MutationnovelP296S0.58
SKCMchr1948603785SilentnovelP295P0.58
SKCMchr1948613162Missense_MutationNAA71T0.46FAM83
SKCMchr1948613331Silentrs749886755S14S0.4
SKCMchr1948613332Missense_Mutationrs745322852S14F0.38FAM83
STADchr1948601135Frame_Shift_Delrs754029394R471Gfs*700.29
STADchr1948609991Missense_Mutationrs778310926V215I0.26
STADchr1948603594Missense_Mutationrs773075907R359H0.53
STADchr1948613254Missense_MutationNAS40N0.29FAM83
STADchr1948603781Frame_Shift_DelNAQ297Rfs*60.28
STADchr1948603781Frame_Shift_DelNAQ297Rfs*60.41
STADchr1948603822Missense_Mutationrs202240553T283M0.19
STADchr1948603720Missense_MutationNAR317H0.33
STADchr1948610700Frame_Shift_DelnovelV205*0.43
STADchr1948603781Frame_Shift_DelNAQ297Rfs*60.21
STADchr1948603569Frame_Shift_Insrs748927204A368Gfs*210.29
STADchr1948609997Missense_Mutationrs749545424V213M0.38
THCAchr1948613295SilentNAL26L0.4
UCECchr1948609932Silentrs201002687T234T0.32
UCECchr1948601355Nonsense_MutationNAW397*0.32
UCECchr1948613104Missense_Mutationrs749433968T90I0.45FAM83
UCECchr1948613070Nonsense_MutationnovelW101*0.27
UCECchr1948603781Frame_Shift_DelNAQ297Rfs*60.41
UCECchr1948601262Silentrs376162806G428G0.32
UCECchr1948601346Missense_MutationNAK400N0.33
UCECchr1948601258Missense_MutationNAA430T0.17
UCECchr1948603781Frame_Shift_DelNAQ297Rfs*60.22
UCECchr1948610838Missense_Mutationrs774422280V159M0.33
UCECchr1948610745Missense_Mutationrs773253521R190C0.51
UCECchr1948603781Frame_Shift_DelNAQ297Rfs*60.62
UCECchr1948603594Missense_Mutationrs773075907R359H0.21
UCECchr1948603692Silentrs766951316P326P0.6
UCECchr1948613128Missense_MutationnovelS82I0.1FAM83
UCECchr1948609876Missense_MutationnovelS253I0.32
UCECchr1948610780Missense_MutationNAT178M0.36
UCECchr1948601317Missense_MutationnovelQ410L0.19

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
CESCDEL0.09150.027508
KIRPDEL0.04860.054726
LUADDEL0.25781.5526e-05
LUSCDEL0.21161.1877e-06
OVDEL0.47842.441e-17
PAADDEL0.0870.035089
READDEL0.09090.23023
TGCTDEL0.28670.0046229
UCSDEL0.23210.12448

Survival Analysis
CancerP-value Q-value
KIRC0.0001

Kaplan-Meier Survival Analysis

SARC0.041

Kaplan-Meier Survival Analysis

MESO0.0063

Kaplan-Meier Survival Analysis

ACC0.0001

Kaplan-Meier Survival Analysis

HNSC0.00038

Kaplan-Meier Survival Analysis

SKCM0.0011

Kaplan-Meier Survival Analysis

KIRP0.00032

Kaplan-Meier Survival Analysis

BLCA0.024

Kaplan-Meier Survival Analysis

CESC0.013

Kaplan-Meier Survival Analysis

LIHC0.021

Kaplan-Meier Survival Analysis

CHOL0.031

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000105523 (Gene tree)
Gene ID
54854
Gene Symbol
FAM83E
Alias
FLJ20200
Full Name
family with sequence similarity 83 member E
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
14,255 bases
Position
chr19:48,600,600-48,614,854
Accession
25972
RBP type
canonical RBP
Summary
FAM83E (Family With Sequence Similarity 83 Member E) is a Protein Coding gene. An important paralog of this gene is FAM83G.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000263266FAM83PF07894.127.7e-10011
ENSP00000470271FAM83PF07894.121.8e-2811
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000263266FAM83E-2011926XM_005259019ENSP00000263266478 (aa)XP_005259076Q2M2I3
ENST00000593772FAM83E-202565-ENSP0000047027191 (aa)-M0QZ37
ENST00000599126FAM83E-204477--- (aa)--
ENST00000595110FAM83E-203590--- (aa)--
Gene Model
Click here to download ENSG00000105523's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000105523Myocardial Infarction1.4500000E-005-
ENSG00000105523Hypertension1.0931092E-005-
ENSG00000105523Alzheimer Disease8E-626993346
ENSG00000105523Neurodegenerative Diseases8E-626993346
ENSG00000105523Carcinoembryonic Antigen5E-824941225
ENSG00000105523Carcinoembryonic Antigen7E-1224941225
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000105523rs4338521948613847?Elevated serum carcinoembryonic antigen levels24941225EFO_0005760
ENSG00000105523rs4338521948613847?Posterior cortical atrophy and Alzheimer's disease26993346[NR]1.6849171EFO_0000249|Orphanet_54247
ENSG00000105523rs713578341948604360?Serum alkaline phosphatase levels29403010[0.046-0.069] unit increase novel0.05724EFO_0004533
ENSG00000105523rs26178051948609038TBlood protein levels30072576[0.11-0.24] unit decrease0.175EFO_0007937
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000105523's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000105523FAM83E8277.333ENSAMEG00000014894-9980.069Ailuropoda_melanoleuca
ENSG00000105523FAM83E9662.069ENSACAG00000016022FAM83E10051.756Anolis_carolinensis
ENSG00000105523FAM83E10087.734ENSANAG00000021014FAM83E10087.734Aotus_nancymaae
ENSG00000105523FAM83E9976.815ENSBTAG00000046291FAM83E9976.411Bos_taurus
ENSG00000105523FAM83E9894.382ENSCJAG00000000384FAM83E10087.318Callithrix_jacchus
ENSG00000105523FAM83E9983.333ENSCAFG00000003971FAM83E9977.485Canis_familiaris
ENSG00000105523FAM83E9983.333ENSCAFG00020026383FAM83E9977.485Canis_lupus_dingo
ENSG00000105523FAM83E9982.222ENSCHIG00000015933FAM83E10074.648Capra_hircus
ENSG00000105523FAM83E9984.444ENSTSYG00000025468FAM83E10074.949Carlito_syrichta
ENSG00000105523FAM83E8788.608ENSCAPG00000010952FAM83E10067.540Cavia_aperea
ENSG00000105523FAM83E8788.608ENSCPOG00000032844FAM83E10069.618Cavia_porcellus
ENSG00000105523FAM83E9893.258ENSCCAG00000021138FAM83E10088.358Cebus_capucinus
ENSG00000105523FAM83E10094.561ENSCATG00000044898FAM83E10094.561Cercocebus_atys
ENSG00000105523FAM83E8789.873ENSCLAG00000010586FAM83E10071.919Chinchilla_lanigera
ENSG00000105523FAM83E10094.770ENSCSAG00000002834FAM83E10094.770Chlorocebus_sabaeus
ENSG00000105523FAM83E9665.517ENSCPBG00000008317FAM83E6857.986Chrysemys_picta_bellii
ENSG00000105523FAM83E10094.351ENSCANG00000027719FAM83E10094.351Colobus_angolensis_palliatus
ENSG00000105523FAM83E9780.682ENSCGRG00001016120Fam83e9970.732Cricetulus_griseus_chok1gshd
ENSG00000105523FAM83E9779.545ENSCGRG00000002432Fam83e9970.468Cricetulus_griseus_crigri
ENSG00000105523FAM83E9683.908ENSDNOG00000040377FAM83E9674.600Dasypus_novemcinctus
ENSG00000105523FAM83E9679.310ENSDORG00000010595Fam83e9973.320Dipodomys_ordii
ENSG00000105523FAM83E9945.055ENSEBUG00000010414FAM83E5741.837Eptatretus_burgeri
ENSG00000105523FAM83E10078.182ENSEASG00005004610FAM83E10077.172Equus_asinus_asinus
ENSG00000105523FAM83E10077.980ENSECAG00000020402FAM83E10076.970Equus_caballus
ENSG00000105523FAM83E9679.310ENSEEUG00000015833FAM83E10072.653Erinaceus_europaeus
ENSG00000105523FAM83E10078.689ENSFCAG00000018559FAM83E10077.869Felis_catus
ENSG00000105523FAM83E10067.213ENSFDAG00000000076FAM83E10067.418Fukomys_damarensis
ENSG00000105523FAM83E9664.368ENSGAGG00000013984FAM83E8854.009Gopherus_agassizii
ENSG00000105523FAM83E10098.745ENSGGOG00000008727FAM83E10098.745Gorilla_gorilla
ENSG00000105523FAM83E10071.255ENSHGLG00000005067FAM83E10071.053Heterocephalus_glaber_female
ENSG00000105523FAM83E10066.398ENSHGLG00100015660FAM83E10066.197Heterocephalus_glaber_male
ENSG00000105523FAM83E9985.556ENSSTOG00000026049FAM83E10079.550Ictidomys_tridecemlineatus
ENSG00000105523FAM83E9977.778ENSJJAG00000018549Fam83e9973.663Jaculus_jaculus
ENSG00000105523FAM83E8959.259ENSLACG00000008573FAM83E9445.000Latimeria_chalumnae
ENSG00000105523FAM83E6672.222ENSLAFG00000029646FAM83E9470.988Loxodonta_africana
ENSG00000105523FAM83E10094.770ENSMFAG00000027835FAM83E10094.770Macaca_fascicularis
ENSG00000105523FAM83E10093.515ENSMMUG00000022156FAM83E10093.515Macaca_mulatta
ENSG00000105523FAM83E10090.586ENSMNEG00000033849FAM83E10088.912Macaca_nemestrina
ENSG00000105523FAM83E9093.902ENSMLEG00000031128-9994.444Mandrillus_leucophaeus
ENSG00000105523FAM83E9980.000ENSMAUG00000010116Fam83e9871.310Mesocricetus_auratus
ENSG00000105523FAM83E9986.667ENSMICG00000043555FAM83E10063.730Microcebus_murinus
ENSG00000105523FAM83E9782.955ENSMOCG00000010689Fam83e9971.690Microtus_ochrogaster
ENSG00000105523FAM83E9758.947ENSMODG00000014096-9960.377Monodelphis_domestica
ENSG00000105523FAM83E9779.545MGP_CAROLIEiJ_G0029741Fam83e9970.287Mus_caroli
ENSG00000105523FAM83E9780.682ENSMUSG00000054161Fam83e9970.287Mus_musculus
ENSG00000105523FAM83E9779.545MGP_PahariEiJ_G0012966Fam83e9969.325Mus_pahari
ENSG00000105523FAM83E9780.682MGP_SPRETEiJ_G0030839Fam83e9970.287Mus_spretus
ENSG00000105523FAM83E10074.747ENSMPUG00000003926FAM83E10074.545Mustela_putorius_furo
ENSG00000105523FAM83E9980.000ENSMLUG00000009261-9982.562Myotis_lucifugus
ENSG00000105523FAM83E9681.609ENSNGAG00000018652Fam83e9972.211Nannospalax_galili
ENSG00000105523FAM83E9096.341ENSNLEG00000027349-7597.619Nomascus_leucogenys
ENSG00000105523FAM83E8974.074ENSMEUG00000000624FAM83E9760.175Notamacropus_eugenii
ENSG00000105523FAM83E9075.000ENSOPRG00000007483-8171.687Ochotona_princeps
ENSG00000105523FAM83E8589.610ENSODEG00000017511FAM83E10071.515Octodon_degus
ENSG00000105523FAM83E8566.234ENSOANG00000012773-9957.436Ornithorhynchus_anatinus
ENSG00000105523FAM83E8181.081ENSOCUG00000013907-6177.019Oryctolagus_cuniculus
ENSG00000105523FAM83E10077.666ENSOGAG00000003559FAM83E10076.459Otolemur_garnettii
ENSG00000105523FAM83E9978.889ENSOARG00000011909FAM83E10071.429Ovis_aries
ENSG00000105523FAM83E10098.901ENSPPAG00000042307-10099.206Pan_paniscus
ENSG00000105523FAM83E10078.279ENSPPRG00000023653FAM83E10077.459Panthera_pardus
ENSG00000105523FAM83E10099.582ENSPTRG00000011243FAM83E10099.582Pan_troglodytes
ENSG00000105523FAM83E10094.770ENSPANG00000002014FAM83E10094.770Papio_anubis
ENSG00000105523FAM83E9185.542ENSPEMG00000011008Fam83e9971.748Peromyscus_maniculatus_bairdii
ENSG00000105523FAM83E8868.750ENSPCIG00000001024FAM83E9656.156Phascolarctos_cinereus
ENSG00000105523FAM83E10093.617ENSPPYG00000010204-10097.674Pongo_abelii
ENSG00000105523FAM83E9073.810ENSPCAG00000011234FAM83E7175.875Procavia_capensis
ENSG00000105523FAM83E9988.889ENSPCOG00000014605FAM83E10081.276Propithecus_coquereli
ENSG00000105523FAM83E8981.481ENSPVAG00000009522FAM83E10078.894Pteropus_vampyrus
ENSG00000105523FAM83E9780.682ENSRNOG00000021039Fam83e9970.697Rattus_norvegicus
ENSG00000105523FAM83E10094.770ENSRBIG00000035409FAM83E10094.770Rhinopithecus_bieti
ENSG00000105523FAM83E10094.770ENSRROG00000028721FAM83E10094.770Rhinopithecus_roxellana
ENSG00000105523FAM83E9794.318ENSSBOG00000016816FAM83E10086.335Saimiri_boliviensis_boliviensis
ENSG00000105523FAM83E9978.889ENSSARG00000010353-7476.923Sorex_araneus
ENSG00000105523FAM83E8866.250ENSSPUG00000013904FAM83E8750.469Sphenodon_punctatus
ENSG00000105523FAM83E10076.200ENSSSCG00000025975FAM83E10076.600Sus_scrofa
ENSG00000105523FAM83E9883.146ENSTBEG00000000955FAM83E10069.289Tupaia_belangeri
ENSG00000105523FAM83E9985.556ENSTTRG00000008177FAM83E9978.279Tursiops_truncatus
ENSG00000105523FAM83E10077.374ENSUAMG00000010673FAM83E10076.364Ursus_americanus
ENSG00000105523FAM83E8979.012ENSUMAG00000000616FAM83E10065.432Ursus_maritimus
ENSG00000105523FAM83E9982.222ENSVVUG00000023172FAM83E9977.688Vulpes_vulpes
ENSG00000105523FAM83E8558.442ENSXETG00000030110FAM83E10041.769Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0019901protein kinase binding24736947.IPIFunction
To top

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us