EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
28821270Calmodulin-like protein 3 is an estrogen receptor alpha coregulator for gene expression and drug response in a SNP, estrogen, and SERM-dependent fashion.Breast Cancer Res2017 Aug 18Qin Sdoi: 10.1186/s13058-017-0890-x.

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1649637776Missense_MutationnovelH459R0.21
BLCAchr1649730880Missense_MutationnovelE56D0.2
BLCAchr1649636071Missense_MutationnovelQ1027H0.1
BLCAchr1649525405Missense_MutationnovelE1223Q0.69
BLCAchr1649638459SilentNAF231F0.43
BLCAchr1649638728Missense_MutationnovelF142L0.71
BLCAchr1649636166Missense_MutationnovelP996S0.09
BLCAchr1649638530Missense_MutationnovelH208N0.22
BLCAchr1649626216Missense_MutationnovelF1177L0.2
BLCAchr1649637719Missense_MutationNAS478F0.14
BLCAchr1649636160Nonsense_MutationnovelQ998*0.23
BLCAchr1649637954Missense_MutationNAD400N0.41
BLCAchr1649638507Silentrs775209030T215T0.76
BLCAchr1649637078Missense_MutationnovelY692N0.35
BLCAchr1649636823Missense_MutationnovelP777T0.1
BLCAchr1649637320Missense_MutationNAE611V0.45
BLCAchr1649638611Missense_MutationnovelR181C0.51
BLCAchr1649638450SilentnovelT234T0.37
BLCAchr1649637952Silentrs372206769D400D0.1
BLCAchr1649635994Missense_MutationnovelS1053C0.13
BLCAchr1649636714Missense_Mutationrs748113449S813N0.6
BLCAchr1649637556SilentnovelL532L0.23
BLCAchr1649636096Missense_MutationnovelG1019V0.68
BLCAchr1649637290Missense_MutationNAS621L0.41
BLCAchr1649637388In_Frame_DelnovelH588del0.15
BRCAchr1649637521Frame_Shift_DelNAG544Afs*50.43
BRCAchr1649637851Missense_Mutationrs142517429A434V0.31
BRCAchr1649637372Missense_MutationNAA594S0.58
BRCAchr1649626246SilentNAT1167T0.53
BRCAchr1649635842Missense_MutationNAV1104M0.33
BRCAchr1649638855Silentrs376572236Q99Q0.45
BRCAchr1649626234Missense_MutationnovelI1171M0.03
BRCAchr1649635849Silentrs200411543N1101N0.4
BRCAchr1649638777Silentrs140519104L125L0.29
BRCAchr1649637780Missense_MutationNAE458K0.33
BRCAchr16494909383'UTRnovel0.18
BRCAchr1649637552Missense_Mutationrs749382074E534K0.37
BRCAchr1649637699Missense_MutationnovelC485R0.29
BRCAchr1649730821Missense_MutationNAF76C0.67
CESCchr1649626210Silentrs76199401N1179N0.48
CESCchr1649637332Missense_Mutationrs754474774S607L0.45
CESCchr1649638257Missense_MutationNAH299D0.51
CESCchr1649637903Missense_Mutationrs772823132R417W0.24
CESCchr1649637802Missense_MutationNAM450I0.35
CESCchr1649679267Intronrs7604133730.32
CESCchr1649636263Missense_MutationNAI963M0.13
CESCchr1649679292IntronNA0.46
CESCchr1649637775Silentrs370346450H459H0.37
CESCchr1649636506Silentrs369348426S882S0.26
CESCchr1649637282Missense_Mutationrs369619436A624T0.3
CESCchr1649637733Silentrs753825038Q473Q0.09
CESCchr1649637774Missense_MutationNAV460F0.81
CHOLchr1649789519Missense_Mutationrs377503772S15L0.12
CHOLchr1649637724Missense_MutationnovelN476K0.11
COADchr1649637886SilentnovelL422L0.18
COADchr1649635700Missense_MutationNAS1151N0.32
COADchr1649523634Missense_MutationnovelT1272S0.18
COADchr1649637696Missense_MutationnovelP486S0.4
COADchr1649626213Missense_MutationnovelE1178D0.19
COADchr1649636900Missense_Mutationrs143285873R751H0.53
COADchr1649636236SilentNAL972L0.18
COADchr1649636368SilentNAG928G0.29
COADchr1649638633SilentnovelR173R0.09
COADchr1649525375Missense_MutationNAV1233M0.17
COADchr1649637952Silentrs372206769D400D0.24
COADchr1649636417Missense_Mutationrs767903828R912Q0.13
COADchr1649638467Missense_MutationNAR229C0.21
COADchr1649637653Missense_Mutationrs779795080R500H0.1
COADchr1649638027Silentrs375403632S375S0.34
COADchr1649636901Missense_Mutationrs757246232R751C0.37
COADchr1649636873Missense_Mutationrs368885869R760H0.23
COADchr1649638062Missense_Mutationrs761674679V364M0.27
COADchr1649637282Missense_Mutationrs369619436A624T0.36
COADchr1649635797Missense_Mutationrs146352545G1119S0.25
COADchr1649525442Silentrs376719006P1210P0.39
COADchr1649636056Silentrs145829157T1032T0.25
COADchr1649638814Missense_Mutationrs377052758A113V0.2
COADchr1649638649Missense_MutationNAC168Y0.4
COADchr1649525394Silentrs766215720G1226G0.05
COADchr1649635780Silentrs766652392E1124E0.32
COADchr1649637973Frame_Shift_DelnovelQ394Rfs*360.13
COADchr1649636438Missense_Mutationrs777432098R905Q0.55
COADchr1649635821Missense_MutationNAE1111K0.59
COADchr1649635790Missense_MutationNAR1121H0.21
COADchr1649637925SilentNAY409Y0.18
COADchr1649636098SilentnovelT1018T0.34
COADchr1649637044Missense_Mutationrs144284315S703L0.09
COADchr1649636125Missense_MutationnovelM1009I0.32
COADchr16494911933'UTRnovel0.25
COADchr1649637170Missense_Mutationrs145272522K661T0.08
COADchr1649637959Missense_Mutationrs375001883R398Q0.33
COADchr1649730906Missense_Mutationrs772307020V48M0.16
COADchr1649638249SilentnovelP301P0.18
COADchr1649637120SilentNAL678L0.35
COADchr1649636904Missense_MutationnovelY750H0.06
COADchr1649637445SilentNAT569T0.24
COADchr1649637499Silentrs142344079P551P0.36
COADchr1649525450Missense_MutationnovelD1208N0.63
COADchr1649636180Missense_Mutationrs778205999R991H0.33
COADchr1649636700Missense_MutationnovelA818T0.22
COADchr1649638014Missense_MutationNAR380C0.16
COADchr1649637088Silentrs150555141T688T0.41
COADchr1649637488Missense_MutationNAP555L0.37
COADchr1649637903Missense_Mutationrs772823132R417W0.36
COADchr1649636758SilentNAC798C0.18
COADchr1649636891Missense_MutationNAA754V0.26
COADchr1649730946Silentrs139517505C34C0.39
COADchr1649637977Missense_MutationNAR392Q0.53
COADchr1649635996Silentrs117592972A1052A0.24
COADchr1649730800Missense_Mutationrs200710667T83M0.49
COADchr1649636252Missense_Mutationrs771703239R967H0.42
COADchr1649637174Missense_Mutationrs779555962R660W0.17
COADchr1649638236Missense_Mutationrs763435948D306N0.15
DLBCchr1649638533Missense_MutationnovelD207N0.33
ESCAchr1649822670Missense_Mutationrs776265059V6I0.62
ESCAchr1649635888SilentnovelP1088P0.09
ESCAchr1649636000Missense_Mutationrs750497057A1051V0.25
ESCAchr16494906543'UTRrs620291290.17
ESCAchr1649523692Missense_MutationnovelG1253R0.52
ESCAchr1649638198Silentrs377569533H318H0.59
ESCAchr1649636900Missense_Mutationrs143285873R751H0.5
ESCAchr1649636741Missense_MutationnovelS804N0.32
ESCAchr1649637806Missense_MutationNAS449F0.46
ESCAchr1649635753Missense_MutationnovelE1133D0.32
GBMchr1649525442Silentrs376719006P1210P0.37
GBMchr1649638026Missense_Mutationrs562976839A376T0.48
GBMchr1649635752Missense_MutationnovelD1134Y0.43
GBMchr1649638510Missense_MutationnovelK214N0.24
GBMchr1649636711Missense_MutationnovelK814M0.16
GBMchr1649637258Missense_MutationnovelY632H0.27
GBMchr1649638770Missense_Mutationrs781749862G128S0.26
GBMchr1649730913SilentnovelR45R0.41
GBMchr1649638458Missense_MutationnovelS232P0.17
GBMchr1649637733Missense_MutationnovelQ473H0.16
HNSCchr1649636938SilentnovelH738H0.31
HNSCchr1649637960SilentnovelR398R0.09
HNSCchr1649525464Missense_MutationnovelC1203Y0.14
HNSCchr1649636480Missense_MutationnovelC891Y0.24
HNSCchr1649730883SilentnovelN55N0.2
HNSCchr1649638852SilentnovelL100L0.14
HNSCchr1649636786Missense_Mutationrs767082011T789N0.11
HNSCchr1649730805Missense_MutationnovelD81E0.05
HNSCchr1649638109Missense_MutationnovelP348L0.59
HNSCchr1649636965Missense_MutationnovelF729L0.09
HNSCchr1649637651Missense_Mutationrs750249389V501I0.08
HNSCchr1649636151Missense_MutationnovelE1001K0.14
HNSCchr1649637823Nonsense_MutationnovelC443*0.16
HNSCchr1649635724Missense_MutationnovelH1143L0.16
HNSCchr1649637602Missense_MutationnovelF517S0.64
HNSCchr1649730942Missense_Mutationrs756709776Q36E0.19
HNSCchr1649637719Missense_MutationnovelS478C0.22
HNSCchr1649730925Silentrs566780634A41A0.14
HNSCchr1649638467Missense_MutationNAR229C0.1
HNSCchr1649635784Missense_MutationnovelP1123L0.27
HNSCchr1649638237Silentrs764527468V305V0.25
KICHchr1649637283Silentrs151294188S623S0.3
KIRCchr1649638644Missense_MutationnovelY170N0.23
KIRCchr1649523698Missense_MutationNAV1251L0.19
KIRCchr1649636933Missense_MutationNAA740V0.16
KIRCchr1649636090Missense_MutationNAR1021H0.34
KIRCchr1649636866SilentNAE762E0.27
KIRPchr1649636957Missense_MutationNAK732M0.13
KIRPchr1649637367Missense_MutationnovelH595Q0.31
KIRPchr1649636274Missense_MutationNAM960V0.19
KIRPchr1649730783Missense_Mutationrs146233664R89C0.29
KIRPchr1649636956Missense_MutationNAK732N0.56
LAMLchr1649637368Missense_MutationnovelH595R0.13
LAMLchr1649638409Missense_MutationnovelK248M0.06
LAMLchr1649822672Missense_MutationnovelR5K0.2
LGGchr16494912483'UTRnovel0.26
LGGchr1649525393Missense_Mutationrs760436403G1227S0.31
LGGchr1649638577Missense_MutationnovelK192R0.12
LIHCchr1649637109SilentnovelL681L0.32
LIHCchr1649626170Nonsense_MutationnovelE1193*0.69
LIHCchr1649525393Missense_Mutationrs760436403G1227S0.25
LIHCchr16494912623'UTRnovel0.29
LIHCchr1649730931SilentNAS39S0.84
LIHCchr1649637388Missense_MutationNAH588Q0.36
LIHCchr1649637627Missense_MutationNAN509H0.38
LIHCchr1649637423Missense_MutationnovelI577F0.43
LIHCchr1649637079SilentnovelH691H0.27
LUADchr1649636320SilentNAG944G0.32
LUADchr1649637851Missense_MutationNAA434E0.42
LUADchr1649636429Frame_Shift_InsnovelD908Gfs*100.3
LUADchr1649638138SilentnovelV338V0.22
LUADchr1649636149Missense_MutationNAE1001D0.2
LUADchr1649638525SilentNAL209L0.21
LUADchr16494912273'UTRnovel0.18
LUADchr1649636492Missense_MutationNAG887V0.26
LUADchr1649637237Missense_MutationNAL639F0.11
LUADchr1649637332Nonsense_MutationNAS607*0.3
LUADchr1649637810Missense_MutationNAD448Y0.73
LUADchr1649636509SilentnovelA881A0.08
LUADchr1649525432Missense_MutationnovelL1214I0.08
LUADchr1649637603Missense_MutationnovelF517V0.11
LUADchr1649637958SilentNAR398R0.11
LUADchr1649638339SilentnovelT271T0.18
LUADchr1649637908Missense_MutationNAS415Y0.35
LUADchr1649638842Missense_MutationNAA104P0.67
LUADchr1649637421SilentnovelI577I0.23
LUADchr1649626201Missense_MutationNAE1182D0.21
LUADchr1649636833Missense_MutationNAH773Q0.2
LUADchr1649636293SilentnovelR953R0.13
LUADchr1649636294Missense_MutationnovelR953L0.14
LUADchr1649636292Missense_MutationNAG954C0.36
LUADchr1649637977Missense_MutationnovelR392L0.11
LUADchr16494911493'UTRnovel0.1
LUADchr1649638068Missense_MutationnovelG362C0.21
LUADchr1649635859Missense_MutationnovelR1098L0.29
LUADchr1649637630Missense_MutationnovelA508S0.17
LUADchr1649491296SilentnovelT1278T0.89
LUADchr1649637288Missense_MutationnovelA622S0.2
LUADchr1649635791Missense_MutationnovelR1121S0.3
LUADchr1649638757Missense_MutationNAG132E0.14
LUADchr1649637040SilentnovelV704V0.45
LUADchr1649635716Missense_MutationNAL1146I0.38
LUADchr1649523738Splice_RegionNAV1237V0.81
LUADchr1649638219SilentNAL311L0.32
LUADchr1649789499Missense_MutationnovelV22L0.35
LUADchr1649636431SilentNAR907R0.13
LUADchr1649635700Missense_MutationnovelS1151I0.53
LUADchr16494912493'UTRnovel0.16
LUADchr1649637472Missense_MutationNAM560I0.26
LUADchr1649789541Nonsense_MutationnovelE8*0.5
LUADchr1649525401Missense_Mutationrs753674596G1224V0.29
LUADchr1649637469Missense_MutationNAE561D0.24
LUADchr1649822656Splice_SitenovelX6_splice0.52
LUADchr1649636670Missense_MutationNAE828K0.12
LUADchr1649636002SilentNAS1050S0.52
LUADchr1649636234Missense_Mutationrs773947241T973M0.18
LUADchr1649637908Missense_Mutationrs760242467S415F0.52
LUADchr1649636152Missense_MutationNAE1000D0.1
LUADchr1649638756SilentNAG132G0.23
LUADchr1649730927Missense_MutationNAA41S0.11
LUADchr1649636069Missense_MutationNAT1028K0.21
LUADchr1649636501Missense_MutationNAP884H0.2
LUADchr1649636343SilentNAR937R0.58
LUADchr1649636077Nonsense_MutationNAC1025*0.3
LUADchr1649635759Missense_MutationnovelS1131R0.09
LUADchr1649636478Missense_MutationnovelG892R0.15
LUADchr1649637009Missense_MutationnovelH715N0.18
LUADchr1649636795Missense_MutationnovelC786F0.85
LUADchr1649638771Silentrs746399268L127L0.66
LUADchr1649637383Missense_MutationNAN590S0.21
LUADchr1649525442SilentNAP1210P0.18
LUADchr1649637151Frame_Shift_DelnovelC667*0.12
LUSCchr1649636670Missense_MutationNAE828K0.25
LUSCchr1649635839Missense_MutationnovelG1105C0.24
LUSCchr1649638736Missense_MutationNAP139H0.16
LUSCchr1649636854Missense_MutationNAQ766H0.46
LUSCchr1649638464Missense_MutationNAG230C0.38
LUSCchr1649636253Missense_MutationNAR967S0.56
LUSCchr1649789509Missense_MutationnovelW18C0.13
LUSCchr1649635963SilentnovelL1063L0.11
LUSCchr1649636009Missense_MutationnovelG1048V0.17
LUSCchr1649635849Silentrs200411543N1101N0.18
LUSCchr1649638466Missense_MutationNAR229H0.36
LUSCchr1649635853Missense_MutationNAA1100G0.5
LUSCchr1649638292Missense_MutationnovelP287Q0.25
LUSCchr1649730840Missense_MutationNAD70Y0.26
LUSCchr1649635870SilentnovelG1094G0.73
LUSCchr1649638025Missense_MutationnovelA376D0.29
LUSCchr1649636681Missense_MutationnovelK824M0.4
LUSCchr1649638228Missense_MutationnovelN308K0.29
LUSCchr1649636725Frame_Shift_DelnovelC809*0.17
LUSCchr1649637297SilentnovelR619R0.28
LUSCchr1649636881Missense_MutationNAW757C0.23
LUSCchr1649637215Missense_MutationNAS646I0.38
LUSCchr1649637982Silentrs61747467P390P0.25
LUSCchr1649635942SilentNAL1070L0.18
LUSCchr1649638095Missense_MutationnovelH353Y0.11
LUSCchr1649638171Missense_MutationnovelM327I0.27
LUSCchr1649637244Silentrs765545274Q636Q0.33
LUSCchr1649638323Missense_MutationNAE277K0.44
LUSCchr1649635847Missense_MutationnovelG1102V0.38
LUSCchr1649637134Missense_MutationNAS673F0.14
LUSCchr1649636874Missense_Mutationrs764927116R760C0.2
LUSCchr1649636875SilentNAF759F0.21
LUSCchr1649635697Missense_MutationnovelG1152E0.18
LUSCchr1649638471Nonsense_MutationnovelC227*0.21
LUSCchr1649637717In_Frame_DelnovelV471_S478del0.17
LUSCchr1649636865Missense_MutationnovelA763P0.32
LUSCchr1649638608Missense_MutationnovelD182N0.1
LUSCchr1649523642Missense_MutationNAF1269L0.06
LUSCchr1649523726SilentNAA1241A0.18
LUSCchr1649638707Missense_MutationnovelR149S0.09
LUSCchr1649635972SilentnovelL1060L0.63
LUSCchr1649637060Missense_Mutationrs148732968D698N0.41
LUSCchr1649730879Missense_MutationnovelD57Y0.18
LUSCchr1649638142Missense_MutationNAG337V0.12
LUSCchr1649637759Missense_MutationNAK465E0.37
LUSCchr1649635944Missense_MutationnovelL1070F0.24
LUSCchr1649636869Missense_MutationNAK761N0.51
LUSCchr1649638091Missense_MutationnovelS354I0.23
LUSCchr1649638292Missense_MutationnovelP287Q0.16
LUSCchr1649523734Missense_MutationnovelV1239F0.85
LUSCchr1649635758Missense_MutationnovelA1132T0.19
LUSCchr1649730864Missense_MutationnovelE62K0.16
MESOchr1649638654Missense_MutationnovelF166L0.11
OVchr1649638671Frame_Shift_DelnovelH156Qfs*220.24
OVchr1649730846Missense_MutationnovelT68P0.14
OVchr1649637109SilentnovelL681L0.56
OVchr1649730859Missense_MutationnovelD63E0.07
OVchr1649789500Silentrs116537749S21S0.18
OVchr1649638624Missense_MutationnovelK176N0.23
OVchr1649730804SilentNAL82L0.27
OVchr1649638115Missense_Mutationrs753225898R346Q0.14
OVchr1649638533Missense_MutationNAD207Y0.34
OVchr1649638643Missense_MutationnovelY170F0.21
OVchr16494912383'UTRnovel0.19
PAADchr1649637173Missense_Mutationrs200218868R660Q0.18
PAADchr16494911723'UTRnovel0.09
PAADchr1649635854Missense_Mutationrs778755872A1100T0.18
PAADchr1649636180Missense_Mutationrs778205999R991H0.19
PAADchr1649638198Silentrs377569533H318H0.27
PRADchr1649636234Missense_Mutationrs773947241T973M0.1
PRADchr1649635996Silentrs117592972A1052A0.18
READchr16494911413'UTRnovel0.43
READchr1649730852Missense_MutationnovelI66F0.08
READchr1649525432Missense_MutationnovelL1214I0.3
READchr1649636550Missense_MutationNAA868T0.43
READchr1649637060Missense_Mutationrs148732968D698N0.44
READchr1649637681Missense_Mutationrs138661785D491N0.32
READchr1649638522Missense_Mutationrs751260245K210N0.41
READchr1649637875Missense_MutationnovelE426V0.23
READchr1649523632Missense_MutationnovelE1273K0.17
READchr1649637282Missense_Mutationrs369619436A624T0.25
SARCchr1649636752Missense_MutationnovelI800M0.19
SARCchr1649636233Silentrs768277837T973T0.54
SKCMchr1649635791Missense_Mutationrs199542804R1121C0.24
SKCMchr1649637636Missense_MutationNAP506A0.38
SKCMchr1649636692SilentNAI820I0.45
SKCMchr1649730971Missense_MutationnovelG26E0.31
SKCMchr1649637255Missense_MutationNAP633S0.36
SKCMchr1649636671SilentnovelR827R0.36
SKCMchr1649635755Missense_MutationnovelE1133K0.25
SKCMchr1649730840Missense_Mutationrs149531360D70N0.34
SKCMchr1649637574SilentNAF526F0.42
SKCMchr1649637478SilentnovelS558S0.65
SKCMchr1649637479Missense_MutationnovelS558F0.64
SKCMchr1649635932Missense_Mutationrs373906393R1074C0.31
SKCMchr1649637329Missense_MutationNAS608Y0.14
SKCMchr1649636059SilentNAS1031S0.31
SKCMchr1649638674Missense_MutationNAH160Y0.46
SKCMchr1649523683Missense_MutationnovelD1256N0.56
SKCMchr1649523735SilentNAF1238F0.24
SKCMchr1649636620SilentNAG844G0.26
SKCMchr1649638054SilentNAS366S0.13
SKCMchr1649637574SilentNAF526F0.97
SKCMchr1649635863Missense_MutationNAA1097T0.55
SKCMchr16494911983'UTRnovel0.31
SKCMchr1649626209Missense_MutationnovelE1180K0.22
SKCMchr1649636882Nonsense_MutationnovelW757*0.14
SKCMchr1649637552Missense_Mutationrs749382074E534K0.37
SKCMchr1649730781Silentrs776280102R89R0.12
SKCMchr1649637574SilentNAF526F0.23
SKCMchr1649637498Missense_Mutationrs750884387V552M0.25
SKCMchr1649638193Missense_MutationNAN320S0.39
SKCMchr1649637654Missense_Mutationrs376465155R500C0.42
SKCMchr1649636520Missense_MutationNAD878N0.53
SKCMchr1649636964Missense_MutationNAD730N0.46
SKCMchr1649638357Silentrs201499268C265C0.26
SKCMchr1649637951Missense_Mutationrs757406757G401R0.44
SKCMchr1649638668Missense_Mutationrs761575829D162N0.12
SKCMchr1649637478SilentnovelS558S0.44
SKCMchr1649637479Missense_MutationnovelS558F0.43
SKCMchr1649730959Missense_MutationNAG30E0.38
SKCMchr1649637047Missense_MutationNAS702F0.15
SKCMchr1649638323Missense_MutationNAE277K0.38
SKCMchr1649635673Missense_MutationNAS1160L0.32
SKCMchr1649730820Silentrs138148545F76F0.42
SKCMchr1649730959Missense_MutationNAG30E0.3
SKCMchr1649637310SilentnovelS614S0.33
SKCMchr1649637311Missense_MutationNAS614F0.34
SKCMchr1649638771Silentrs746399268L127L0.32
SKCMchr1649637292Silentrs747790367L620L0.15
SKCMchr1649637349Silentrs376118736A601A0.13
SKCMchr1649637350Missense_MutationNAA601V0.12
SKCMchr1649636342Missense_MutationNAR937Q0.26zf-C2H2
SKCMchr1649637685Silentrs776964253F489F0.16
SKCMchr1649637919Silentrs776280246C411C0.49
SKCMchr1649636691SilentnovelL821L0.56
SKCMchr1649636692SilentNAI820I0.56
SKCMchr1649637744Missense_MutationNAP470S0.52
SKCMchr1649638000Silentrs748728165P384P0.37
SKCMchr1649638805Missense_Mutationrs376833288T116M0.35
SKCMchr1649636874Missense_Mutationrs764927116R760C0.32
SKCMchr1649637994SilentNAS386S0.18
SKCMchr1649635905Missense_MutationNAD1083H0.53
SKCMchr1649638540SilentNAS204S0.25
SKCMchr1649636704SilentnovelF816F0.5
SKCMchr16494912103'UTRnovel0.1
SKCMchr1649637958SilentNAR398R0.24
SKCMchr1649636670Missense_MutationNAE828K0.43
SKCMchr1649637544Silentrs780174138I536I0.46
SKCMchr1649636580SilentnovelL858L0.44
SKCMchr1649636983SilentNAT723T0.43
SKCMchr1649637044Missense_Mutationrs144284315S703L0.28
SKCMchr1649730840Missense_Mutationrs149531360D70N0.63
SKCMchr1649730963Missense_MutationnovelE29K0.69
SKCMchr1649635702SilentNAT1150T0.41
SKCMchr1649636699Missense_MutationNAA818V0.18
SKCMchr1649636929SilentNAV741V0.38
STADchr1649636300Missense_Mutationrs200057861T951M0.28zf-C2H2
STADchr1649637813SilentnovelL447L0.26
STADchr16494912343'UTRrs3697700260.32
STADchr1649637060Missense_Mutationrs148732968D698N0.18
STADchr1649636056Silentrs145829157T1032T0.17
STADchr1649638484Missense_MutationnovelK223R0.22
STADchr1649730946Silentrs139517505C34C0.15
STADchr1649638026Frame_Shift_DelnovelA376Pfs*130.2
STADchr1649638035Missense_MutationNAD373N0.2
STADchr1649638507SilentNAT215T0.11
STADchr1649637500Missense_MutationNAP551Q0.48
STADchr1649637606Missense_MutationNAA516T0.3
STADchr1649636038Silentrs749408750H1038H0.26
STADchr1649637339Missense_MutationNAP605T0.25
STADchr1649730925Silentrs566780634A41A0.26
STADchr1649637661SilentNAE497E0.31
STADchr1649638084Missense_MutationNAS356R0.26
STADchr1649730946Silentrs139517505C34C0.42
STADchr1649636111Missense_Mutationrs762582497R1014H0.33
STADchr1649636314SilentnovelR946R0.42
STADchr1649637386Missense_MutationnovelK589R0.48
STADchr1649636512Silentrs376264701D880D0.11
STADchr1649637174Missense_Mutationrs779555962R660W0.23
STADchr1649636114Missense_MutationNAL1013P0.15
STADchr1649637086Missense_Mutationrs745433383S689L0.32
STADchr1649637170Missense_Mutationrs145272522K661T0.23
STADchr1649637800Missense_MutationNAP451H0.06
STADchr1649636898Missense_MutationNAC752R0.25
STADchr16494911453'UTRnovel0.24
STADchr1649637341Missense_MutationnovelS604N0.12
STADchr1649637960Missense_Mutationrs368847069R398W0.23
STADchr1649635849Silentrs200411543N1101N0.16
STADchr1649636519Missense_MutationNAD878G0.19
STADchr1649637853Silentrs777932033H433H0.2
STADchr1649638610Missense_Mutationrs778240903R181H0.22
STADchr1649638795Silentrs371181840I119I0.29
STADchr1649637044Missense_Mutationrs144284315S703L0.44
STADchr1649637637SilentNAG505G0.28
STADchr1649730819Missense_MutationNAE77K0.26
STADchr1649789530SilentNAA11A0.25
STADchr16494912153'UTRnovel0.29
STADchr1649636242SilentNAS970S0.29
STADchr1649636413Silentrs571689478P913P0.37
STADchr1649635954Silentrs748651721C1066C0.45
STADchr16494912593'UTRnovel0.27
UCECchr1649636555Missense_MutationNAP866H0.36
UCECchr1649636964Missense_MutationNAD730N0.3
UCECchr1649637588Missense_MutationNAC522R0.32
UCECchr1649730887Missense_MutationNAR54K0.29
UCECchr1649636775Missense_MutationnovelE793K0.35
UCECchr1649637485Missense_Mutationrs573032120T556M0.18
UCECchr1649637684Missense_Mutationrs771331763A490T0.15
UCECchr1649638484Missense_MutationnovelK223T0.1
UCECchr1649730971Missense_MutationnovelG26E0.19
UCECchr1649730972Splice_SitenovelX26_splice0.31
UCECchr1649636232Missense_MutationnovelL974F0.39
UCECchr1649637241Silentrs144950533C637C0.09
UCECchr1649626228Silentrs373620289C1173C0.16
UCECchr1649636965Silentrs138278000F729F0.62
UCECchr1649525391SilentnovelG1227G0.09
UCECchr1649637780Missense_MutationNAE458K0.41
UCECchr1649730891Missense_MutationnovelE53K0.35
UCECchr1649637853Silentrs777932033H433H0.26
UCECchr1649638594Missense_MutationnovelK186N0.56
UCECchr1649638240SilentNAF304F0.3
UCECchr1649635697Missense_MutationNAG1152V0.19
UCECchr1649638246Missense_MutationNAE302D0.26
UCECchr1649638743Missense_MutationNAP137S0.36
UCECchr16498227375'UTRnovel0.11
UCECchr1649789489Missense_MutationnovelA25V0.15
UCECchr1649638049Missense_MutationnovelS368N0.18
UCECchr1649638177SilentnovelC325C0.38
UCECchr1649637838SilentnovelQ438Q0.09
UCECchr1649525450Missense_MutationnovelD1208N0.22
UCECchr16494909933'UTRnovel0.7
UCECchr1649626209Missense_MutationnovelE1180K0.47
UCECchr1649636049Missense_MutationnovelL1035F0.29
UCECchr1649637338Missense_MutationnovelP605L0.06
UCECchr16494911493'UTRnovel0.31
UCECchr1649636439Missense_MutationnovelR905W0.4
UCECchr1649638350Missense_MutationnovelC268R0.42
UCECchr1649636315Missense_Mutationrs757677116R946Q0.44zf-C2H2
UCECchr1649636457Missense_MutationnovelV899M0.53
UCECchr1649636965Silentrs138278000F729F0.15
UCECchr1649638328Missense_Mutationrs553506281T275M0.1
UCECchr16494906633'UTRnovel0.58
UCECchr16494911203'UTRnovel0.19
UCECchr1649636507Missense_Mutationrs777639594S882L0.56
UCECchr1649637770Missense_Mutationrs200959271R461H0.5
UCECchr1649638022Missense_MutationnovelS377Y0.55
UCECchr1649638240SilentNAF304F0.37
UCECchr1649638770Missense_Mutationrs781749862G128S0.5
UCECchr16494912363'UTRnovel0.55
UCECchr1649638684Silentrs550048605H156H0.13
UCECchr16494907773'UTRnovel0.29
UCECchr16494909383'UTRnovel0.44
UCECchr1649636488SilentnovelC888C0.2
UCECchr1649636861Missense_MutationnovelD764G0.41
UCECchr1649638677Missense_MutationnovelI159F0.43
UCECchr1649637880SilentNAV424V0.27
UCECchr1649635816Silentrs372366526P1112P0.33
UCECchr1649638133Missense_MutationNAC340F0.26
UCECchr1649525420Missense_MutationNAI1218V0.33
UCECchr1649637485Missense_Mutationrs573032120T556M0.11
UCECchr1649638347Missense_Mutationrs745876102E269K0.17
UCECchr1649636000Missense_Mutationrs750497057A1051V0.49
UCECchr1649637684Missense_Mutationrs771331763A490T0.31
UCECchr16494910993'UTRnovel0.3
UCECchr1649638240SilentNAF304F0.33
UCECchr1649730782Missense_Mutationrs745597535R89H0.49
UCECchr1649636180Missense_Mutationrs778205999R991H0.38
UCECchr1649637282Missense_Mutationrs369619436A624T0.38
UCECchr1649638240SilentNAF304F0.49
UCECchr1649638581Missense_MutationNAD191N0.43
UCECchr1649637339Missense_MutationNAP605T0.39
UCECchr1649636253Missense_Mutationrs773112623R967C0.24
UCECchr1649637651Missense_Mutationrs750249389V501I0.44
UCECchr1649525406Silentrs371710780F1222F0.07
UCECchr1649626216Silentrs370042590F1177F0.2
UCECchr1649637626Missense_MutationnovelN509S0.18
UCECchr1649525373SilentnovelV1233V0.48
UCECchr1649638814Missense_MutationNAA113E0.04
UCECchr1649637296Missense_Mutationrs201174934R619Q0.27
UCECchr1649638357Silentrs201499268C265C0.43
UCECchr1649636672Missense_MutationNAR827Q0.48
UCECchr1649638466Missense_MutationNAR229H0.52
UCECchr1649636512Silentrs376264701D880D0.27
UCECchr1649636433Missense_Mutationrs544721667R907W0.38
UCECchr1649637552Missense_Mutationrs749382074E534K0.39
UCECchr1649525453Missense_MutationnovelF1207L0.2
UCECchr1649636893Silentrs758301410T753T0.35
UCECchr1649637622SilentnovelP510P0.2
UCECchr1649637885Missense_MutationnovelA423T0.32
UCECchr1649637771Missense_Mutationrs569507095R461C0.4
UCECchr1649638026Missense_Mutationrs562976839A376T0.3
UCECchr1649638791Missense_MutationNAD121Y0.27
UCECchr16494911403'UTRnovel0.4
UCECchr1649523696SilentnovelV1251V0.27
UCECchr1649635902Missense_Mutationrs759221881V1084I0.37
UCECchr1649636226Missense_MutationnovelE976K0.44
UCECchr1649637108Missense_MutationnovelT682S0.4
UCECchr1649637629Missense_MutationNAA508V0.26
UCECchr1649638000Silentrs748728165P384P0.37
UCECchr1649730799Silentrs762110313T83T0.36
UVMchr1649635691Missense_Mutationrs532940886R1154Q0.31
UVMchr1649638347Missense_Mutationrs745876102E269K0.29

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
CESCDEL0.14580.017271
CHOLDEL0.19440.23475
SARCDEL0.48250.0011106
SKCMDEL0.27790.036923
TGCTAMP0.08670.035574
UCECDEL0.22084.7164e-05

Survival Analysis
CancerP-value Q-value
KIRC0.0074

Kaplan-Meier Survival Analysis

STAD0.007

Kaplan-Meier Survival Analysis

ACC0.0018

Kaplan-Meier Survival Analysis

SKCM0.036

Kaplan-Meier Survival Analysis

LUSC0.016

Kaplan-Meier Survival Analysis

LAML0.003

Kaplan-Meier Survival Analysis

KICH0.011

Kaplan-Meier Survival Analysis

LIHC0.04

Kaplan-Meier Survival Analysis

LGG0.00046

Kaplan-Meier Survival Analysis

THCA0.045

Kaplan-Meier Survival Analysis

UVM0.0028

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000102935 (Gene tree)
Gene ID
23090
Gene Symbol
ZNF423
Alias
KIAA0760|OAZ|hOAZ|Ebfaz|Zfp104|NPHP14|JBTS19
Full Name
zinc finger protein 423
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
370,396 bases
Position
chr16:49,487,524-49,857,919
Accession
16762
RBP type
canonical RBP
Summary
The protein encoded by this gene is a nuclear protein that belongs to the family of Kruppel-like C2H2 zinc finger proteins. It functions as a DNA-binding transcription factor by using distinct zinc fingers in different signaling pathways. Thus, it is thought that this gene may have multiple roles in signal transduction during development. Mutations in this gene are associated with nephronophthisis-14 and Joubert syndrome-19. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2012]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000455588zf-C2H2PF00096.264.2e-5716
ENSP00000455588zf-C2H2PF00096.264.2e-5726
ENSP00000455588zf-C2H2PF00096.264.2e-5736
ENSP00000455588zf-C2H2PF00096.264.2e-5746
ENSP00000455588zf-C2H2PF00096.264.2e-5756
ENSP00000455588zf-C2H2PF00096.264.2e-5766
ENSP00000457664zf-C2H2PF00096.264.2e-5716
ENSP00000457664zf-C2H2PF00096.264.2e-5726
ENSP00000457664zf-C2H2PF00096.264.2e-5736
ENSP00000457664zf-C2H2PF00096.264.2e-5746
ENSP00000457664zf-C2H2PF00096.264.2e-5756
ENSP00000457664zf-C2H2PF00096.264.2e-5766
ENSP00000457928zf-C2H2PF00096.264.2e-5716
ENSP00000457928zf-C2H2PF00096.264.2e-5726
ENSP00000457928zf-C2H2PF00096.264.2e-5736
ENSP00000457928zf-C2H2PF00096.264.2e-5746
ENSP00000457928zf-C2H2PF00096.264.2e-5756
ENSP00000457928zf-C2H2PF00096.264.2e-5766
ENSP00000262383zf-C2H2PF00096.261.9e-5616
ENSP00000262383zf-C2H2PF00096.261.9e-5626
ENSP00000262383zf-C2H2PF00096.261.9e-5636
ENSP00000262383zf-C2H2PF00096.261.9e-5646
ENSP00000262383zf-C2H2PF00096.261.9e-5656
ENSP00000262383zf-C2H2PF00096.261.9e-5666
ENSP00000455426zf-C2H2PF00096.261.9e-5616
ENSP00000455426zf-C2H2PF00096.261.9e-5626
ENSP00000455426zf-C2H2PF00096.261.9e-5636
ENSP00000455426zf-C2H2PF00096.261.9e-5646
ENSP00000455426zf-C2H2PF00096.261.9e-5656
ENSP00000455426zf-C2H2PF00096.261.9e-5666
ENSP00000442321zf-C2H2PF00096.264.8e-5616
ENSP00000442321zf-C2H2PF00096.264.8e-5626
ENSP00000442321zf-C2H2PF00096.264.8e-5636
ENSP00000442321zf-C2H2PF00096.264.8e-5646
ENSP00000442321zf-C2H2PF00096.264.8e-5656
ENSP00000442321zf-C2H2PF00096.264.8e-5666
ENSP00000455061zf-C2H2PF00096.264.8e-5616
ENSP00000455061zf-C2H2PF00096.264.8e-5626
ENSP00000455061zf-C2H2PF00096.264.8e-5636
ENSP00000455061zf-C2H2PF00096.264.8e-5646
ENSP00000455061zf-C2H2PF00096.264.8e-5656
ENSP00000455061zf-C2H2PF00096.264.8e-5666
ENSP00000442321zf-metPF12874.70.0006613
ENSP00000442321zf-metPF12874.70.0006623
ENSP00000442321zf-metPF12874.70.0006633
ENSP00000455061zf-metPF12874.70.0006613
ENSP00000455061zf-metPF12874.70.0006623
ENSP00000455061zf-metPF12874.70.0006633
ENSP00000455588zf-metPF12874.70.0009513
ENSP00000455588zf-metPF12874.70.0009523
ENSP00000455588zf-metPF12874.70.0009533
ENSP00000457664zf-metPF12874.70.0009513
ENSP00000457664zf-metPF12874.70.0009523
ENSP00000457664zf-metPF12874.70.0009533
ENSP00000457928zf-metPF12874.70.0009513
ENSP00000457928zf-metPF12874.70.0009523
ENSP00000457928zf-metPF12874.70.0009533
ENSP00000262383zf-metPF12874.70.001413
ENSP00000262383zf-metPF12874.70.001423
ENSP00000262383zf-metPF12874.70.001433
ENSP00000455426zf-metPF12874.70.001413
ENSP00000455426zf-metPF12874.70.001423
ENSP00000455426zf-metPF12874.70.001433
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000562871ZNF423-2054514XM_005255856ENSP000004579281224 (aa)XP_005255913Q2M1K9
ENST00000535559ZNF423-2024201-ENSP000004423211167 (aa)-F5H7S1
ENST00000567169ZNF423-2074017-ENSP000004550611167 (aa)-F5H7S1
ENST00000562520ZNF423-2044018-ENSP000004576641224 (aa)-Q2M1K9
ENST00000262383ZNF423-2014578XM_017023076ENSP000002623831284 (aa)XP_016878565Q2M1K9
ENST00000561648ZNF423-2037907XM_006721171ENSP000004554261284 (aa)XP_006721234Q2M1K9
ENST00000568094ZNF423-208456-ENSP00000479288102 (aa)-A0A087WV99
ENST00000563137ZNF423-2064911XM_017023077ENSP000004555881224 (aa)XP_016878566Q2M1K9
Gene Model
Click here to download ENSG00000102935's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000102935Fibrinogen5.7490000E-005-
ENSG00000102935Cell Adhesion Molecules9.8620000E-006-
ENSG00000102935Cell Adhesion Molecules8.2910000E-005-
ENSG00000102935Cell Adhesion Molecules9.7140000E-005-
ENSG00000102935Erythrocyte Count2.2020000E-005-
ENSG00000102935Leukoaraiosis9.5010925E-005-
ENSG00000102935Asthma4.1398350E-005-
ENSG00000102935Platelet Function Tests7.4154449E-006-
ENSG00000102935Platelet Function Tests4.4408920E-015-
ENSG00000102935Receptors, Transferrin2.7460000E-005-
ENSG00000102935Behavior3E-618821565
ENSG00000102935Cannabis6E-625987507
ENSG00000102935Age of Onset