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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
26824322Cold inducible RNA binding protein upregulation in pituitary corticotroph adenoma induces corticotroph cell proliferation via Erk signaling pathway.Oncotarget2016 Feb 23Jian Fdoi: 10.18632/oncotarget.7037.
26824423Heterogenous ribonucleoprotein A18 (hnRNP A18) promotes tumor growth by increasing protein translation of selected transcripts in cancer cells.Oncotarget2016 Mar 1Chang ETdoi: 10.18632/oncotarget.7020.
25934796Expression of cold-inducible RNA-binding protein (CIRP) in pituitary adenoma and its relationships with tumor recurrence.Med Sci Monit2015 May 2Wang Mdoi: 10.12659/MSM.893128.
19277990Down-regulating cold shock protein genes impairs cancer cell survival and enhances chemosensitivity.J Cell Biochem2009 May 1Zeng Ydoi: 10.1002/jcb.22114.
27395339Cold-inducible RNA-binding protein promotes epithelial-mesenchymal transition by activating ERK and p38 pathways.Biochem Biophys Res Commun2016 Sep 2Lee HNdoi: 10.1016/j.bbrc.2016.07.028
28373441Expression of RNA-binding Motif Protein 3 (RBM3) and Cold-inducible RNA-binding protein (CIRP) Is Associated with Improved Clinical Outcome in Patients with Colon Cancer.Anticancer Res2017 AprJang HH-
27864909The mechanism of CIRP in inhibition of keratinocytes growth arrest and apoptosis following low dose UVB radiation.Mol Carcinog2017 JunLiao Ydoi: 10.1002/mc.22597

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr191271020Silentrs767659188Y29Y0.21
BLCAchr191271440Nonsense_Mutationrs774624754R108*0.28
BLCAchr191270085Intronnovel0.06
BLCAchr1912725643'UTRrs1921331790.61
BLCAchr191272167Intronnovel0.36
BLCAchr191271000Missense_MutationNAE23K0.29RRM_1
BRCAchr191269931IntronNA0.53
BRCAchr191272042Missense_Mutationrs749046630D165N0.27
BRCAchr191272369IntronNA0.31
BRCAchr191272307IntronNA0.24
BRCAchr191271008SilentNAV25V0.21
BRCAchr191271129Intronnovel0.26
BRCAchr191272340Intronrs1482774980.16
BRCAchr1912724493'UTRnovel0.16
CESCchr191270037IntronNA0.23
CESCchr191271013Missense_MutationNAS27L0.66RRM_1
CESCchr191270132Intronrs7638468490.19
CESCchr191272192Intronnovel0.29
CESCchr191271031Missense_MutationNAS33F0.32
COADchr191272335Intronrs7626210320.38
COADchr1912725063'UTRnovel0.13
COADchr191270982Missense_Mutationrs11555031T17A0.45RRM_1
ESCAchr1912683475'Flanknovel0.14
ESCAchr1912682465'FlankNA0.25
GBMchr191270945SilentnovelD4D0.07
HNSCchr191271990Missense_MutationnovelQ147H0.2
HNSCchr191271984SilentnovelR145R0.2
HNSCchr191271943Intronnovel0.32
HNSCchr191271944Intronnovel0.33
HNSCchr1912725533'UTRrs7763855590.32
KICHchr191271792IntronNA0.43
KIRCchr191271914Intronnovel0.26
KIRPchr191272241Intronnovel0.31
KIRPchr191272266Intronnovel0.48
KIRPchr1912725893'UTRnovel0.21
KIRPchr191272032Missense_MutationnovelR161S0.31
LAMLchr191272102Intronrs7785429420.21
LGGchr191271134Splice_Regionnovel0.07
LIHCchr191271586Missense_MutationnovelE129K0.41
LIHCchr191271159Missense_MutationNAR41S0.31
LUADchr191272010Missense_Mutationrs529222296R154Q0.16
LUADchr191270020Intronnovel0.55
LUADchr191270963SilentnovelV10V0.08
LUSCchr191271225Silentrs777298813A63A0.22
LUSCchr191271359Missense_MutationnovelQ81E0.11
LUSCchr191269977Intronnovel0.79
LUSCchr191271558SilentnovelG119G0.69
LUSCchr191270930Splice_Regionnovel0.26
LUSCchr191271176Missense_MutationNAR47L0.39
LUSCchr191269901Intronnovel0.4
MESOchr191271575Missense_Mutationrs747328699G125E0.44
OVchr1912724633'UTRnovel0.06
OVchr191272359Intronnovel0.13
OVchr191271182Missense_MutationNAF49S0.84
OVchr191270966SilentnovelG11G0.03
PAADchr191270153Intronnovel0.35
PAADchr1912726193'UTRnovel0.23
PRADchr191271166Nonsense_MutationNAQ44*0.31
READchr191270939SilentnovelA2A0.31
READchr191272071Intronrs5277050890.42
READchr191270938Missense_MutationnovelA2V0.4
READchr191272155Intronnovel0.39
SKCMchr1912724883'UTRnovel0.1
SKCMchr191272064Intronnovel0.06
SKCMchr191270988Missense_MutationNAE19K0.24RRM_1
SKCMchr191270126Intronnovel0.7
STADchr191272349Intronrs7586501270.26
STADchr1912725713'UTRnovel0.2
STADchr1912725953'UTRnovel0.43
STADchr191269855Intronnovel0.39
STADchr191272160Intronnovel0.4
STADchr191271434Frame_Shift_DelnovelG107Afs*820.35
STADchr191269882Intronnovel0.15
STADchr191272349Intronrs7586501270.19
STADchr191271909Intronnovel0.14
STADchr191271910Intronnovel0.14
UCECchr1912683775'FlankNA0.29
UCECchr191270973Missense_MutationnovelS14G0.14RRM_1
UCECchr191271398Missense_MutationnovelR94S0.16
UCECchr191272053Splice_Regionnovel0.33
UCECchr191272374Intronnovel0.26
UCECchr191272084Intronnovel0.1
UCECchr1912724733'UTRNA0.43
UCECchr191272051Missense_MutationnovelA168S0.2
UCECchr191270121Intronrs7671496450.4
UCECchr1912683865'FlankNA0.3
UCECchr191269984IntronNA0.28
UCECchr191271393Missense_MutationNAG92E0.24
UCECchr191272020Silentrs750904041G157G0.48
UCECchr191271926Intronnovel0.33
UCECchr191272014SilentnovelS155S0.07
UCECchr191272326Intronnovel0.35
UCECchr191271440Nonsense_Mutationrs774624754R108*0.43
UCECchr191270066Intronnovel0.29
UCECchr191271212Missense_MutationnovelD59G0.36
UCECchr1912741753'Flanknovel0.33
UCECchr1912742883'Flanknovel0.29
UCECchr191271550Splice_SitenovelX117_splice0.09
UCECchr1912726503'UTRnovel0.43
UCECchr1912682085'Flanknovel0.29
UCECchr1912742893'Flanknovel0.36
UCECchr191271841Intronnovel0.36
UCECchr191271156SilentnovelD40D0.34
UCECchr191272059Splice_Regionnovel0.28
UCECchr191271007Missense_MutationnovelV25G0.43RRM_1
UCECchr191271585Silentrs748698880F128F0.28
UCECchr191272341Intronrs5453240610.29
UCECchr191271417Missense_MutationNAG100D0.48
UCECchr1912682145'Flanknovel0.33
UCECchr191269976Intronnovel0.47
UCECchr191270199Intronnovel0.31
UCECchr191272433In_Frame_DelNAN171del0.38
UCECchr191271571Frame_Shift_DelnovelN126Tfs*630.23
UCECchr1912681895'Flanknovel0.33
UCECchr191270225Intronnovel0.41
UCECchr191272392Intronrs3764606360.4
UCECchr1912743663'Flanknovel0.17
UCECchr191271566Missense_MutationnovelG122V0.24

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCADEL0.22557.2756e-08
COADDEL0.10647.5925e-05
ESCADEL0.35878.6035e-06
KIRPDEL0.04860.058467
LIHCDEL0.18654.7028e-08
OVDEL0.85321.3528e-139
PAADDEL0.14670.0060878
READDEL0.12730.23023
SKCMDEL0.17440.0059983
THCADEL0.0120.10598
UCSDEL0.758.0449e-14

Survival Analysis
CancerP-value Q-value
KIRC0.0013

Kaplan-Meier Survival Analysis

MESO0.014

Kaplan-Meier Survival Analysis

BRCA0.0029

Kaplan-Meier Survival Analysis

ESCA0.013

Kaplan-Meier Survival Analysis

KIRP0.00066

Kaplan-Meier Survival Analysis

PAAD0.00031

Kaplan-Meier Survival Analysis

CESC0.015

Kaplan-Meier Survival Analysis

LAML0.048

Kaplan-Meier Survival Analysis

UCEC0.00024

Kaplan-Meier Survival Analysis

LIHC0.015

Kaplan-Meier Survival Analysis

LGG0.0001

Kaplan-Meier Survival Analysis

CHOL0.048

Kaplan-Meier Survival Analysis

THCA0.047

Kaplan-Meier Survival Analysis

LUAD0.0012

Kaplan-Meier Survival Analysis

UVM0.00012

Kaplan-Meier Survival Analysis

OV0.049

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000099622 (Gene tree)
Gene ID
1153
Gene Symbol
CIRBP
Alias
CIRP
Full Name
cold inducible RNA binding protein
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
15,497 bases
Position
chr19:1,259,384-1,274,880
Accession
1982
RBP type
canonical RBP
Summary
(Cold Inducible RNA Binding Protein) is a Protein Coding gene. Diseases associated with CIRBP include Cryptorchidism, Unilateral Or Bilateral. Among its related pathways are DNA Damage and Neuroscience. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is RBMX.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000467138RRM_1PF00076.224.7e-2611
ENSP00000466238RRM_1PF00076.226.7e-2611
ENSP00000465338RRM_1PF00076.229.8e-2611
ENSP00000465334RRM_1PF00076.222.2e-2511
ENSP00000466712RRM_1PF00076.222.6e-2511
ENSP00000467734RRM_1PF00076.222.9e-2511
ENSP00000467848RRM_1PF00076.222.9e-2511
ENSP00000468645RRM_1PF00076.222.9e-2511
ENSP00000322887RRM_1PF00076.223.1e-2511
ENSP00000465779RRM_1PF00076.223.1e-2511
ENSP00000466110RRM_1PF00076.223.1e-2511
ENSP00000466207RRM_1PF00076.223.1e-2511
ENSP00000468788RRM_1PF00076.223.1e-2511
ENSP00000468097RRM_1PF00076.223.2e-2511
ENSP00000412831RRM_1PF00076.228.1e-2511
ENSP00000465077RRM_1PF00076.229.6e-2511
ENSP00000465558RRM_1PF00076.229.6e-2511
ENSP00000466025RRM_1PF00076.229.6e-2511
ENSP00000466897RRM_1PF00076.229.6e-2511
ENSP00000486590RRM_1PF00076.229.6e-2511
ENSP00000467028RRM_1PF00076.226.9e-0811
ENSP00000468016RRM_1PF00076.222.8e-0611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
18085409Proteomic analysis of RNA-binding proteins in dry seeds of rice after fractionation by ssDNA affinity column chromatography.Biotechnol Lett2008 MayMasaki S-
15075239Oxygen-regulated expression of the RNA-binding proteins RBM3 and CIRP by a HIF-1-independent mechanism.J Cell Sci2004 Apr 1Wellmann S-
27147467Cold-inducible proteins CIRP and RBM3, a unique couple with activities far beyond the cold.Cell Mol Life Sci2016 OctZhu Xdoi: 10.1007/s00018-016-2253-7
28536481TRPV4-dependent induction of a novel mammalian cold-inducible protein SRSF5 as well as CIRP and RBM3.Sci Rep2017 May 23Fujita Tdoi: 10.1038/s41598-017-02473-x.
29175331Involvement of TRPV3 and TRPM8 ion channel proteins in induction of mammalian cold-inducible proteins.Biochem Biophys Res Commun2018 Jan 1Fujita Tdoi: 10.1016/j.bbrc.2017.11.136
28373441Expression of RNA-binding Motif Protein 3 (RBM3) and Cold-inducible RNA-binding protein (CIRP) Is Associated with Improved Clinical Outcome in Patients with Colon Cancer.Anticancer Res2017 AprJang HH-
10793079Decreased expression of mouse Rbm3, a cold-shock protein, in Sertoli cells of cryptorchid testis.Am J Pathol2000 MayDanno S-
23415676Effects of moderate and deep hypothermia on RNA-binding proteins RBM3 and CIRP expressions in murine hippocampal brain slices.Brain Res2013 Apr 4Tong Gdoi: 10.1016/j.brainres.2013.01.041
19277990Down-regulating cold shock protein genes impairs cancer cell survival and enhances chemosensitivity.J Cell Biochem2009 May 1Zeng Ydoi: 10.1002/jcb.22114.
27556928Cold Shock Proteins Are Expressed in the Retina Following Exposure to Low Temperatures.PLoS One2016 Aug 24Larrayoz IMdoi: 10.1371/journal.pone.0161458
29743635Morphoregulatory functions of the RNA-binding motif protein 3 in cell spreading, polarity and migration.Sci Rep2018 May 9Pilotte Jdoi: 10.1038/s41598-018-25668-2.
15308334Osmotic stress of salmon stimulates upregulation of a cold inducible RNA binding protein (CIRP) similar to that of mammals and amphibians.Biochimie2004 JulPan F-
10470498Expression of axolotl RNA-binding protein during development of the Mexican axolotl.Cell Tissue Res1999 AugBhatia R-
13679363Xenopus cold-inducible RNA-binding protein 2 interacts with ElrA, the Xenopus homolog of HuR, and inhibits deadenylation of specific mRNAs.J Biol Chem2003 Nov 28Aoki K-
15305607Changes in gene expression in canola roots induced by ACC-deaminase-containing plant-growth-promoting bacteria.Mol Plant Microbe Interact2004 AugHontzeas N-
15165181Interaction of the plant glycine-rich RNA-binding protein MA16 with a novel nucleolar DEAD box RNA helicase protein from Zea mays.Plant J2004 JunGendra E-
23001445Downregulation of cold-inducible RNA-binding protein activates mitogen-activated protein kinases and impairs spermatogenic function in mouse testes.Asian J Androl2012 NovXia ZPdoi: 10.1038/aja.2012.71
17924945Auto-regulation of the circadian slave oscillator component AtGRP7 and regulation of its targets is impaired by a single RNA recognition motif point mutation.Plant J2007 DecSchoning JC-
22819822Cold-inducible RNA-binding protein (CIRP) regulates target mRNA stabilization in the mouse testis.FEBS Lett2012 Sep 21Xia Zdoi: 10.1016/j.febslet.2012.07.004
22090442Control of barley (Hordeum vulgare L.) development and senescence by the interaction between a chromosome six grain protein content locus, day length, and vernalization.J Exp Bot2012 FebParrott DLdoi: 10.1093/jxb/err360
22013065Structure function analysis of an ADP-ribosyltransferase type III effector and its RNA-binding target in plant immunity.J Biol Chem2011 Dec 16Jeong BRdoi: 10.1074/jbc.M111.290122
21453442Reversible photoswitchable DRONPA-s monitors nucleocytoplasmic transport of an RNA-binding protein in transgenic plants.Traffic2011 JunLummer Mdoi: 10.1111/j.1600-0854.2011.01180.x
25482277Comparative efficacies of six different media for cryopreservation of immature buffalo (Bubalus bubalis) calf testis.Reprod Fertil Dev2016 JunDevi Ldoi: 10.1071/RD14171.
24957607Structural basis of nucleic acid binding by Nicotiana tabacum glycine-rich RNA-binding protein: implications for its RNA chaperone function.Nucleic Acids Res2014 JulKhan Fdoi: 10.1093/nar/gku468
24281950A glycine-rich RNA-binding protein affects gibberellin biosynthesis in Arabidopsis.Mol Biol Rep2014 JanLohr Bdoi: 10.1007/s11033-013-2878-7
23434876A new set of reversibly photoswitchable fluorescent proteins for use in transgenic plants.Mol Plant2013 SepLummer Mdoi: 10.1093/mp/sst040
27364162Cellular Functions of RNA-Binding Motif Protein 3 (RBM3): Clues in Hypothermia, Cancer Biology and Apoptosis.Protein Pept Lett2016Al-Astal HI-
30154017Cold-inducible RNA-binding protein-derived peptide C23 attenuates inflammation and tissue injury in a murine model of intestinal ischemia-reperfusion.Surgery2018 DecMcGinn JTdoi: 10.1016/j.surg.2018.06.048
18753264Identification of cold-shock protein RBM3 as a possible regulator of skeletal muscle size through expression profiling.Am J Physiol Regul Integr Comp Physiol2008 OctDupont-Versteegden EEdoi: 10.1152/ajpregu.90455.2008
30517002Identification of G-Quadruplex-Binding Protein from the Exploration of RGG Motif/G-Quadruplex Interactions.J Am Chem Soc2018 Dec 26Huang ZLdoi: 10.1021/jacs.8b09329
20088860Zinc finger-containing glycine-rich RNA-binding protein in Oryza sativa has an RNA chaperone activity under cold stress conditions.Plant Cell Environ2010 MayKim JYdoi: 10.1111/j.1365-3040.2009.02101.x
19527663Quantitative analysis of single-molecule RNA-protein interaction.Biophys J2009 Jun 17Fuhrmann Adoi: 10.1016/j.bpj.2009.03.022.
19214433Flooding stress-induced glycine-rich RNA-binding protein from Nicotiana tabacum.Mol Cells2009 Jan 31Lee MOdoi: 10.1007/s10059-009-0004-4
18576621Changes in conformational dynamics of mRNA upon AtGRP7 binding studied by fluorescence correlation spectroscopy.J Am Chem Soc2008 Jul 23Schuttpelz Mdoi: 10.1021/ja801994z
17967451The cold-inducible RNA-binding protein migrates from the nucleus to cytoplasmic stress granules by a methylation-dependent mechanism and acts as a translational repressor.Exp Cell Res2007 Dec 10De Leeuw F-
21779801Molecular characterization and expression analysis of a glycine-rich RNA-binding protein gene from Malus hupehensis Rehd.Mol Biol Rep2012 AprWang Sdoi: 10.1007/s11033-011-1197-0
23912241The RNA chaperone and protein chaperone activity of Arabidopsis glycine-rich RNA-binding protein 4 and 7 is determined by the propensity for the formation of high molecular weight complexes.Protein J2013 AugHan JHdoi: 10.1007/s10930-013-9504-3.
30840177Identification and characterisation of a glycine-rich RNA-binding protein as an endogenous suppressor of RNA silencing from Nicotiana glutinosa.Planta2019 JunHuang Xdoi: 10.1007/s00425-019-03122-5
16100116APBP-1, a DNA/RNA-binding protein, interacts with the chick aggrecan regulatory region.J Biol Chem2005 Oct 21Pirok EW 3rd-
19940440Potential contributions of heat shock proteins to temperature-dependent sex determination in the American alligator.Sex Dev2010Kohno Sdoi: 10.1159/000260374
25495582Structural and biochemical analysis of the Hordeum vulgare L. HvGR-RBP1 protein, a glycine-rich RNA-binding protein involved in the regulation of barley plant development and stress response.Biochemistry2014 Dec 23Tripet BPdoi: 10.1021/bi5007223
25449834Proteomic analysis of oil bodies in mature Jatropha curcas seeds with different lipid content.J Proteomics2015 Jan 15Liu Hdoi: 10.1016/j.jprot.2014.10.013
26324889Identification of the VERNALIZATION 4 gene reveals the origin of spring growth habit in ancient wheats from South Asia.Proc Natl Acad Sci U S A2015 Sep 29Kippes Ndoi: 10.1073/pnas.1514883112
28409548RBMS3 Inhibits the Proliferation and Metastasis of Breast Cancer Cells.Oncol Res2018 Jan 19Yang Ydoi: 10.3727/096504017X14871200709504
29084609Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7.Genome Biol2017 Oct 31Meyer Kdoi: 10.1186/s13059-017-1332-x.
9747799Cloning and characterization of cold-regulated glycine-rich RNA-binding protein genes from leafy spurge (Euphorbia esula L.) and comparison to heterologous genomic clones.Plant Mol Biol1998 Nov 1Horvath DP-
9617823A glycine-rich RNA-binding protein gene is differentially expressed during acute hypersensitive response following Tobacco Mosaic Virus infection in tobacco.Plant Mol Biol1998 JunNaqvi SM-
9602141XCIRP (Xenopus homolog of cold-inducible RNA-binding protein) is expressed transiently in developing pronephros and neural tissue.Gene1998 May 12Uochi T-
9571190Diurnal change of the cold-inducible RNA-binding protein (Cirp) expression in mouse brain.Biochem Biophys Res Commun1998 Apr 17Nishiyama H-
9422546Decreased expression of cold-inducible RNA-binding protein (CIRP) in male germ cells at elevated temperature.Am J Pathol1998 JanNishiyama H-
9434172Cloning and characterization of human CIRP (cold-inducible RNA-binding protein) cDNA and chromosomal assignment of the gene.Gene1997 Dec 19Nishiyama H-
9238008AtGRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana.Proc Natl Acad Sci U S A1997 Aug 5Heintzen C-
9151692A glycine-rich RNA-binding protein mediating cold-inducible suppression of mammalian cell growth.J Cell Biol1997 May 19Nishiyama H-
8704137cDNA encoding a wheat (Triticum aestivum cv. Chinese spring) glycine-rich RNA-binding protein.Plant Mol Biol1996 MarGuiltinan MJ-
8641279Transfer of rps19 to the nucleus involves the gain of an RNP-binding motif which may functionally replace RPS13 in Arabidopsis mitochondria.EMBO J1996 May 1Sanchez H-
8639753A low-temperature-responsive gene from barley encodes a protein with single-stranded nucleic acid-binding activity which is phosphorylated in vitro.Plant Mol Biol1996 MarDunn MA-
8541495Analysis of randomly isolated cDNAs from developing endosperm of rice (Oryza sativa L.): evaluation of expressed sequence tags, and expression levels of mRNAs.Plant Mol Biol1995 NovLiu J-
16600183Cold-inducible RNA binding protein is required for the expression of adhesion molecules and embryonic cell movement in Xenopus laevis.Biochem Biophys Res Commun2006 May 26Peng Y-
16608866The role of a zinc finger-containing glycine-rich RNA-binding protein during the cold adaptation process in Arabidopsis thaliana.Plant Cell Physiol2006 JunKim YO-
16614778Gene expression and genetic mapping analyses of a perennial ryegrass glycine-rich RNA-binding protein gene suggest a role in cold adaptation.Mol Genet Genomics2006 AprShinozuka H-
16569452Cirp protects against tumor necrosis factor-alpha-induced apoptosis via activation of extracellular signal-regulated kinase.Biochim Biophys Acta2006 MarSakurai T-
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29345380CIRP increases ICAM-1+ phenotype of neutrophils exhibiting elevated iNOS and NETs in sepsis.J Leukoc Biol2018 AprOde Ydoi: 10.1002/JLB.3A0817-327RR
29361038Cold-inducible RNA-binding protein (CIRP) induces translation of the cell-cycle inhibitor p27Kip1.Nucleic Acids Res2018 Apr 6Roilo Mdoi: 10.1093/nar/gkx1317.
29432179PARP-1-dependent recruitment of cold-inducible RNA-binding protein promotes double-strand break repair and genome stability.Proc Natl Acad Sci U S A2018 Feb 20Chen JKdoi: 10.1073/pnas.1713912115
29434211A cold-inducible RNA-binding protein (CIRP)-derived peptide attenuates inflammation and organ injury in septic mice.Sci Rep2018 Feb 12Zhang Fdoi: 10.1038/s41598-017-13139-z.
29463416Irradiation of rainbow trout at early life stages results in a proteomic legacy in adult gills. Part A; proteomic responses in the irradiated fish and in non-irradiated bystander fish.Environ Res2018 MaySmith RWdoi: 10.1016/j.envres.2017.12.023
29632721The Toll like receptor 4 ligand cold-inducible RNA-binding protein as vaccination platform against cancer.Oncoimmunology2017 Dec 21Villanueva Ldoi: 10.1080/2162402X.2017.1409321
29740470A Glycine-Rich RNA-Binding Protein, CsGR-RBP3, Is Involved in Defense Responses Against Cold Stress in Harvested Cucumber (Cucumis sativus L.) Fruit.Front Plant Sci2018 Apr 23Wang Bdoi: 10.3389/fpls.2018.00540
29849797Expression of cold-inducible RNA-binding protein (CIRP) in renal cell carcinoma and the effect of CIRP downregulation cell proliferation and chemosensitivity to gemcitabine.Oncol Lett2018 MayZhou KWdoi: 10.3892/ol.2018.8338
29967286Genome-Wide Association Analyses Reveal the Importance of Alternative Splicing in Diversifying Gene Function and Regulating Phenotypic Variation in Maize.Plant Cell2018 JulChen Qdoi: 10.1105/tpc.18.00109
29981150The Mechanism of CIRP in Regulation of STAT3 Phosphorylation and Bag-1/S Expression Upon UVB Radiation.Photochem Photobiol2018 NovSun Wdoi: 10.1111/php.12981
30148763CIRP Induces Neutrophil Reverse Transendothelial Migration in Sepsis.Shock2019 MayJin Hdoi: 10.1097/SHK.0000000000001257.
30288703The Mechanism Enabling Hibernation in Mammals.Adv Exp Med Biol2018Horii Ydoi: 10.1007/978-981-13-1244-1_3.
30315244CIRBP is a novel oncogene in human bladder cancer inducing expression of HIF-1α.Cell Death Dis2018 Oct 12Lu Mdoi: 10.1038/s41419-018-1109-5.
30396738Cold-inducible RNA-binding protein as a novel target to alleviate blood-brain barrier damage induced by cardiopulmonary bypass.J Thorac Cardiovasc Surg2018 Sep 29Liu Mdoi: 10.1016/j.jtcvs.2018.08.100
30399610Infants Uniquely Express High Levels of RBM3 and Other Cold-Adaptive Neuroprotectant Proteins in the Human Brain.Dev Neurosci2018Jackson TCdoi: 10.1159/000493637
30461215The regulation of CIRBP by transforming growth factor beta during heat shock-induced testicular injury.Andrology2019 MarRao Mdoi: 10.1111/andr.12566
30471729Functional screening of salt tolerance genes from a halophyte Sporobolus virginicus and transcriptomic and metabolomic analysis of salt tolerant plants expressing glycine-rich RNA-binding protein.Plant Sci2019 JanTada Ydoi: 10.1016/j.plantsci.2018.10.019
30645013Extracellular CIRP (eCIRP) and inflammation.J Leukoc Biol2019 JulAziz Mdoi: 10.1002/JLB.3MIR1118-443R
30691879C23, an oligopeptide derived from cold-inducible RNA-binding protein, suppresses inflammation and reduces lung injury in neonatal sepsis.J Pediatr Surg2019 Jan 4Denning NLdoi: 10.1016/j.jpedsurg.2018.12.020
30720431Cold-inducible RNA-binding protein (CIRBP) adjusts clock-gene expression and REM-sleep recovery following sleep deprivation.Elife2019 Feb 5Hoekstra MMdoi: 10.7554/eLife.43400.
30742790Effects of cold-inducible RNA-binding protein on the proliferation and apoptosis of spermatogenic cells in vitro following heat stress.Reprod Fertil Dev2019 AprCheng Gdoi: 10.1071/RD18469.
30878570Therapeutic hypothermia protects photoreceptors through activating Cirbp pathway.Neurochem Int2019 JunSun YJdoi: 10.1016/j.neuint.2019.03.006
30881126CIRP regulates BEV-induced cell migration in gliomas.Cancer Manag Res2019 Mar 11Liu YXdoi: 10.2147/CMAR.S191249
30909542Effects of Cold-inducible RNA-binding Protein (CIRP) on Liver Glycolysis during Acute Cold Exposure in C57BL/6 Mice.Int J Mol Sci2019 Mar 23Liu Pdoi: 10.3390/ijms20061470.
31000768Cold-inducible RNA-binding Protein Induces Neutrophil Extracellular Traps in the Lungs during Sepsis.Sci Rep2019 Apr 18Ode Ydoi: 10.1038/s41598-019-42762-1.
31019028Chronic hypoxia-induced Cirbp hypermethylation attenuates hypothermic cardioprotection via down-regulation of ubiquinone biosynthesis.Sci Transl Med2019 Apr 24Liu Ydoi: 10.1126/scitranslmed.aat8406.
31029098An annual cycle of gene regulation in the red-legged salamander mental gland: from hypertrophy to expression of rapidly evolving pheromones.BMC Dev Biol2019 Apr 27Wilburn DBdoi: 10.1186/s12861-019-0190-z.
31054221Plasma Cold-Inducible RNA-Binding Protein Predicts Lung Dysfunction After Cardiovascular Surgery Following Cardiopulmonary Bypass: A Prospective Observational Study.Med Sci Monit2019 May 4Chen Xdoi: 10.12659/MSM.914318.
31146675Extracellular cold inducible RNA-binding protein mediates binge alcohol-induced brain hypoactivity and impaired cognition in mice.Mol Med2019 May 30Jacob Adoi: 10.1186/s10020-019-0092-3.
31188649Mild hypothermia causes a shift in the alternative splicing of cold-inducible RNA-binding protein transcripts in Syrian hamsters.Am J Physiol Regul Integr Comp Physiol2019 Aug 1Horii Ydoi: 10.1152/ajpregu.00012.2019
31231308The MAPK Pathway-Based Drug Therapeutic Targets in Pituitary Adenomas.Front Endocrinol (Lausanne)2019 May 22Lu Mdoi: 10.3389/fendo.2019.00330
31241165Regulation Of Flowering Time By The RNA-binding Proteins AtGRP7 And AtGRP8.Plant Cell Physiol2019 Jun 26Steffen Adoi: 10.1093/pcp/pcz124
31271215Cold-inducible RNA-binding protein maintains intestinal barrier during deep hypothermic circulatory arrest.Interact Cardiovasc Thorac Surg2019 Jul 4Li Ydoi: 10.1093/icvts/ivz147
31293389Combined Cyclosporin A and Hypothermia Treatment Inhibits Activation of BV-2 Microglia but Induces an Inflammatory Response in an Ischemia/Reperfusion Hippocampal Slice Culture Model.Front Cell Neurosci2019 Jun 25Wowro SJdoi: 10.3389/fncel.2019.00273
16595739Effect of moderate hypothermia on gene expression by THP-1 cells: a DNA microarray study.Physiol Genomics2006 Jun 16Sonna LA-
9245737Increased transcript level of RBM3, a member of the glycine-rich RNA-binding protein family, in human cells in response to cold stress.Biochem Biophys Res Commun1997 Jul 30Danno S-
11574538The UV-inducible RNA-binding protein A18 (A18 hnRNP) plays a protective role in the genotoxic stress response.J Biol Chem2001 Dec 14Yang C-
19900510A new generation of proto-oncogenes: cold-inducible RNA binding proteins.Biochim Biophys Acta2010 JanLleonart MEdoi: 10.1016/j.bbcan.2009.11.001
19070373Solea senegalensis genes responding to lipopolysaccharide and copper sulphate challenges: large-scale identification by suppression subtractive hybridization and absolute quantification of transcriptional profiles by real-time RT-PCR.Aquat Toxicol2009 Mar 9Prieto-Alamo MJdoi: 10.1016/j.aquatox.2008.11.001
23792593Cold-induced RNA-binding proteins regulate circadian gene expression by controlling alternative polyadenylation.Sci Rep2013Liu Ydoi: 10.1038/srep02054.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000589266CIRBP-223616-ENSP0000046713880 (aa)-K7ENX8
ENST00000591622CIRBP-233548--- (aa)--
ENST00000592815CIRBP-240334-ENSP0000046702838 (aa)-K7ENN6
ENST00000588230CIRBP-2171013-ENSP00000465558297 (aa)-D6W5Y5
ENST00000586636CIRBP-210938-ENSP00000464906168 (aa)-K7EPM4
ENST00000591659CIRBP-234587-ENSP00000468097173 (aa)-K7ER40
ENST00000591055CIRBP-230928-ENSP00000466216135 (aa)-K7ELT6
ENST00000585914CIRBP-2061052XM_011527668ENSP00000467948202 (aa)XP_011525970K7EQR7
ENST00000592051CIRBP-236573-ENSP0000046801632 (aa)-K7EQX4
ENST00000585913CIRBP-205833-ENSP00000467449168 (aa)-K7EPM4
ENST00000593283CIRBP-244758--- (aa)--
ENST00000586773CIRBP-211942XM_017026237ENSP00000468645168 (aa)XP_016881726K7EPM4
ENST00000591097CIRBP-2311507-ENSP0000046822960 (aa)-K7EIF7
ENST00000621399CIRBP-2451044--- (aa)--
ENST00000588411CIRBP-219619-ENSP00000465338105 (aa)-K7EJV5
ENST00000586548CIRBP-2081734-ENSP00000466712159 (aa)-K7EMY9
ENST00000592412CIRBP-238532-ENSP0000046787679 (aa)-K7EQL0
ENST00000591376CIRBP-232830-ENSP0000046483079 (aa)-K7EQL0
ENST00000588090CIRBP-2161459-ENSP00000466207172 (aa)-Q14011
ENST00000590188CIRBP-227361--- (aa)--
ENST00000589235CIRBP-2221073-ENSP00000467848168 (aa)-K7EPM4
ENST00000590704CIRBP-2291456--- (aa)--
ENST00000588344CIRBP-218370-ENSP0000046623889 (aa)-K7ELV6
ENST00000591935CIRBP-235746-ENSP00000467734168 (aa)-K7EPM4
ENST00000585630CIRBP-204870-ENSP00000466110172 (aa)-Q14011
ENST00000588030CIRBP-2151509-ENSP00000468788172 (aa)-Q14011
ENST00000413636CIRBP-2021606-ENSP00000412831263 (aa)-Q14011
ENST00000587169CIRBP-2123028-ENSP0000046511479 (aa)-K7EQL0
ENST00000587896CIRBP-2141081-ENSP00000466025297 (aa)-D6W5Y5
ENST00000628979CIRBP-2461043-ENSP00000486590297 (aa)-D6W5Y5
ENST00000589686CIRBP-224532-ENSP00000465334148 (aa)-K7EJV1
ENST00000593048CIRBP-241650-ENSP0000046779179 (aa)-K7EQL0
ENST00000593128CIRBP-243796--- (aa)--
ENST00000592234CIRBP-237571-ENSP0000046613173 (aa)-K7ELL4
ENST00000444172CIRBP-203584-ENSP0000040751258 (aa)-F6WMK9
ENST00000592467CIRBP-239796--- (aa)--
ENST00000588917CIRBP-2201087--- (aa)--
ENST00000586472CIRBP-2071303-ENSP00000465779172 (aa)-Q14011
ENST00000586555CIRBP-209716--- (aa)--
ENST00000320936CIRBP-2011328XM_006722637ENSP00000322887172 (aa)XP_006722700Q14011
ENST00000589710CIRBP-2251835-ENSP00000466897297 (aa)-D6W5Y5
ENST00000587323CIRBP-2131092-ENSP00000465077297 (aa)-D6W5Y5
ENST00000590347CIRBP-2283117-ENSP00000467307135 (aa)-K7ELT6
ENST00000593093CIRBP-2423528NR_023312-- (aa)--
ENST00000589161CIRBP-221769--- (aa)--
ENST00000590171CIRBP-226905-ENSP0000046472860 (aa)-K7EIF7
Gene Model
Click here to download ENSG00000099622's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000099622's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000099622CIRBP9335.135ENSG00000112081SRSF38231.325
ENSG00000099622CIRBP9041.667ENSG00000188529SRSF105037.805
ENSG00000099622CIRBP8450.000ENSG00000152430BOLL5146.667
ENSG00000099622CIRBP9157.534ENSG00000136527TRA2B5245.918
ENSG00000099622CIRBP9837.500ENSG00000196361ELAVL36437.500
ENSG00000099622CIRBP9143.836ENSG00000177733HNRNPA05743.421
ENSG00000099622CIRBP9146.479ENSG00000139675HNRNPA1L27044.737
ENSG00000099622CIRBP9132.877ENSG00000265241RBM8A7132.000
ENSG00000099622CIRBP9743.243ENSG00000071626DAZAP15541.379
ENSG00000099622CIRBP9031.944ENSG00000115128SF3B65531.944
ENSG00000099622CIRBP9535.526ENSG00000115875SRSF77036.000
ENSG00000099622CIRBP9956.962ENSG00000242389RBMY1E9156.000
ENSG00000099622CIRBP9155.172ENSG00000138668HNRNPD9343.662
ENSG00000099622CIRBP9956.962ENSG00000234414RBMY1A19156.000
ENSG00000099622CIRBP9134.247ENSG00000104852SNRNP705532.692
ENSG00000099622CIRBP9642.647ENSG00000101104PABPC1L6740.260
ENSG00000099622CIRBP9031.944ENSG00000149187CELF18335.385
ENSG00000099622CIRBP9333.784ENSG00000124193SRSF66134.066
ENSG00000099622CIRBP9343.243ENSG00000132819RBM386941.667
ENSG00000099622CIRBP9933.333ENSG00000104177MYEF26133.333
ENSG00000099622CIRBP9962.025ENSG00000147274RBMX9463.014
ENSG00000099622CIRBP9147.887ENSG00000170144HNRNPA35746.053
ENSG00000099622CIRBP9956.962ENSG00000244395RBMY1D9156.000
ENSG00000099622CIRBP9335.135ENSG00000090621PABPC46732.184
ENSG00000099622CIRBP9538.158ENSG00000111786SRSF97736.842
ENSG00000099622CIRBP9838.462ENSG00000140488CELF65538.356
ENSG00000099622CIRBP9145.205ENSG00000115053NCL5743.299
ENSG00000099622CIRBP9962.025ENSG00000213516RBMXL17553.390
ENSG00000099622CIRBP9033.571ENSG00000106682EIF4H5831.544
ENSG00000099622CIRBP9047.222ENSG00000161547SRSF27141.053
ENSG00000099622CIRBP9437.500ENSG00000107105ELAVL27736.364
ENSG00000099622CIRBP10047.368ENSG00000153944MSI27544.000
ENSG00000099622CIRBP9940.506ENSG00000151923TIAL16838.824
ENSG00000099622CIRBP9433.333ENSG00000130811EIF3G6133.333
ENSG00000099622CIRBP9636.471ENSG00000152795HNRNPDL5936.709
ENSG00000099622CIRBP9631.765ENSG00000076053RBM75831.944
ENSG00000099622CIRBP9438.889ENSG00000070756PABPC18438.095
ENSG00000099622CIRBP9833.333ENSG00000066044ELAVL17533.333
ENSG00000099622CIRBP9956.962ENSG00000242875RBMY1B9156.000
ENSG00000099622CIRBP9940.506ENSG00000116001TIA18840.741
ENSG00000099622CIRBP9638.889ENSG00000162374ELAVL46838.889
ENSG00000099622CIRBP9837.179ENSG00000254535PABPC4L6237.349
ENSG00000099622CIRBP9130.263ENSG00000179950PUF606230.263
ENSG00000099622CIRBP9147.887ENSG00000122566HNRNPA2B17946.053
ENSG00000099622CIRBP10073.750ENSG00000102317RBM310057.059
ENSG00000099622CIRBP9138.356ENSG00000131051RBM395235.714
ENSG00000099622CIRBP9139.726ENSG00000114503NCBP26638.043
ENSG00000099622CIRBP9642.857ENSG00000197451HNRNPAB6640.741
ENSG00000099622CIRBP9146.479ENSG00000135486HNRNPA19041.860
ENSG00000099622CIRBP9332.432ENSG00000100650SRSF57833.708
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000099622CIRBP10075.000ENSAMEG00000012653RBM39864.912Ailuropoda_melanoleuca
ENSG00000099622CIRBP100100.000ENSAMEG00000003278CIRBP10070.111Ailuropoda_melanoleuca
ENSG00000099622CIRBP10076.250ENSACAG00000013718-10061.935Anolis_carolinensis
ENSG00000099622CIRBP10084.375ENSACAG00000023931-10067.785Anolis_carolinensis
ENSG00000099622CIRBP100100.000ENSACAG00000000441CIRBP10082.955Anolis_carolinensis
ENSG00000099622CIRBP10062.500ENSANAG00000028569-10050.000Aotus_nancymaae
ENSG00000099622CIRBP10091.250ENSANAG00000027805-9479.651Aotus_nancymaae
ENSG00000099622CIRBP10073.750ENSANAG00000028883-9662.791Aotus_nancymaae
ENSG00000099622CIRBP100100.000ENSANAG00000036495-10097.093Aotus_nancymaae
ENSG00000099622CIRBP100100.000ENSBTAG00000007480CIRBP10081.193Bos_taurus
ENSG00000099622CIRBP10072.500ENSBTAG00000025848RBM310061.494Bos_taurus
ENSG00000099622CIRBP10073.750ENSCJAG00000047341-9662.791Callithrix_jacchus
ENSG00000099622CIRBP10058.750ENSCJAG00000047359-9351.562Callithrix_jacchus
ENSG00000099622CIRBP100100.000ENSCJAG00000005504CIRBP10097.093Callithrix_jacchus
ENSG00000099622CIRBP10072.500ENSCAFG00000016002-10059.036Canis_familiaris
ENSG00000099622CIRBP100100.000ENSCAFG00000019506CIRBP10094.054Canis_familiaris
ENSG00000099622CIRBP10072.500ENSCAFG00000015485RBM310061.364Canis_familiaris
ENSG00000099622CIRBP10068.421ENSCAFG00020021344-9066.667Canis_lupus_dingo
ENSG00000099622CIRBP100100.000ENSCAFG00020017138CIRBP10094.054Canis_lupus_dingo
ENSG00000099622CIRBP10070.000ENSCAFG00020020106-8865.217Canis_lupus_dingo
ENSG00000099622CIRBP10073.750ENSCAFG00020017705-8267.647Canis_lupus_dingo
ENSG00000099622CIRBP100100.000ENSCHIG00000021288CIRBP10098.256Capra_hircus
ENSG00000099622CIRBP10072.500ENSCHIG00000009007RBM310060.920Capra_hircus
ENSG00000099622CIRBP10067.500ENSTSYG00000035938-10057.639Carlito_syrichta
ENSG00000099622CIRBP9758.065ENSTSYG00000027687-10040.556Carlito_syrichta
ENSG00000099622CIRBP10068.421ENSTSYG00000033076-10054.118Carlito_syrichta
ENSG00000099622CIRBP10075.000ENSTSYG00000008670-10063.529Carlito_syrichta
ENSG00000099622CIRBP10063.750ENSTSYG00000031540-8750.413Carlito_syrichta
ENSG00000099622CIRBP9563.158ENSTSYG00000034265-10048.045Carlito_syrichta
ENSG00000099622CIRBP10068.421ENSTSYG00000035220-8856.098Carlito_syrichta
ENSG00000099622CIRBP10073.750ENSCAPG00000005923RBM310064.535Cavia_aperea
ENSG00000099622CIRBP10075.000ENSCPOG00000003553RBM310065.116Cavia_porcellus
ENSG00000099622CIRBP10096.250ENSCPOG00000019403CIRBP10090.751Cavia_porcellus
ENSG00000099622CIRBP100100.000ENSCCAG00000034994CIRBP10097.093Cebus_capucinus
ENSG00000099622CIRBP10060.000ENSCCAG00000035552-10051.748Cebus_capucinus
ENSG00000099622CIRBP10073.750ENSCCAG00000038019-9662.791Cebus_capucinus
ENSG00000099622CIRBP9973.418ENSCATG00000038524-9956.213Cercocebus_atys
ENSG00000099622CIRBP10073.750ENSCATG00000029986-9957.396Cercocebus_atys
ENSG00000099622CIRBP100100.000ENSCATG00000042253CIRBP10099.419Cercocebus_atys
ENSG00000099622CIRBP100100.000ENSCLAG00000016087CIRBP10097.093Chinchilla_lanigera
ENSG00000099622CIRBP10075.000ENSCLAG00000002908RBM310065.882Chinchilla_lanigera
ENSG00000099622CIRBP10073.750ENSCSAG00000013242RBM310057.059Chlorocebus_sabaeus
ENSG00000099622CIRBP100100.000ENSCSAG00000012245CIRBP100100.000Chlorocebus_sabaeus
ENSG00000099622CIRBP10071.250ENSCHOG00000007642RBM310060.947Choloepus_hoffmanni
ENSG00000099622CIRBP10084.375ENSCPBG00000021863-10072.289Chrysemys_picta_bellii
ENSG00000099622CIRBP10073.750ENSCPBG00000021859RBM310070.659Chrysemys_picta_bellii
ENSG00000099622CIRBP100100.000ENSCPBG00000022930CIRBP10091.329Chrysemys_picta_bellii
ENSG00000099622CIRBP10072.500ENSCANG00000014668-10055.882Colobus_angolensis_palliatus
ENSG00000099622CIRBP10060.526ENSCANG00000031890-10047.887Colobus_angolensis_palliatus
ENSG00000099622CIRBP10073.750ENSCANG00000037907-10057.059Colobus_angolensis_palliatus
ENSG00000099622CIRBP100100.000ENSCANG00000037000CIRBP100100.000Colobus_angolensis_palliatus
ENSG00000099622CIRBP10075.000ENSCGRG00001018909Rbm310065.294Cricetulus_griseus_chok1gshd
ENSG00000099622CIRBP10075.000ENSCGRG00000014636Rbm310065.294Cricetulus_griseus_crigri
ENSG00000099622CIRBP10099.048ENSCGRG00000013689Cirbp10095.349Cricetulus_griseus_crigri
ENSG00000099622CIRBP10071.250ENSDNOG00000035132-9060.465Dasypus_novemcinctus
ENSG00000099622CIRBP10075.000ENSDNOG00000048200-9355.909Dasypus_novemcinctus
ENSG00000099622CIRBP10075.000ENSDNOG00000032565-10062.941Dasypus_novemcinctus
ENSG00000099622CIRBP10073.750ENSDNOG00000040748-9355.000Dasypus_novemcinctus
ENSG00000099622CIRBP10071.250ENSDNOG00000041625-9353.846Dasypus_novemcinctus
ENSG00000099622CIRBP9063.889ENSDNOG00000040147-8453.939Dasypus_novemcinctus
ENSG00000099622CIRBP10073.750ENSDNOG00000049801-10061.932Dasypus_novemcinctus
ENSG00000099622CIRBP10071.053ENSDNOG00000033435-9650.327Dasypus_novemcinctus
ENSG00000099622CIRBP10073.750ENSDNOG00000042033-8157.447Dasypus_novemcinctus
ENSG00000099622CIRBP10062.500ENSDNOG00000040058-9647.771Dasypus_novemcinctus
ENSG00000099622CIRBP10075.000ENSDNOG00000010420-7364.706Dasypus_novemcinctus
ENSG00000099622CIRBP9245.695ENSDNOG00000037833-9440.278Dasypus_novemcinctus
ENSG00000099622CIRBP10060.526ENSDNOG00000043650-8847.445Dasypus_novemcinctus
ENSG00000099622CIRBP100100.000ENSDORG00000023540Cirbp10098.256Dipodomys_ordii
ENSG00000099622CIRBP10075.000ENSDORG00000000182Rbm310066.471Dipodomys_ordii
ENSG00000099622CIRBP10051.250ENSEASG00005023389-8845.714Equus_asinus_asinus
ENSG00000099622CIRBP10071.053ENSEASG00005008251RBM310058.427Equus_asinus_asinus
ENSG00000099622CIRBP100100.000ENSEASG00005021677CIRBP9482.547Equus_asinus_asinus
ENSG00000099622CIRBP10051.250ENSECAG00000002141-9948.235Equus_caballus
ENSG00000099622CIRBP10075.000ENSECAG00000024257RBM310064.706Equus_caballus
ENSG00000099622CIRBP8246.512ENSECAG00000038298-6541.237Equus_caballus
ENSG00000099622CIRBP100100.000ENSECAG00000028247CIRBP5194.318Equus_caballus
ENSG00000099622CIRBP9496.667ENSELUG00000019617-9673.620Esox_lucius
ENSG00000099622CIRBP9483.333ENSELUG00000004652-6865.306Esox_lucius
ENSG00000099622CIRBP10061.250ENSFCAG00000021952-9657.647Felis_catus
ENSG00000099622CIRBP10075.000ENSFCAG00000002245RBM310063.793Felis_catus
ENSG00000099622CIRBP10068.421ENSFCAG00000030938-8963.855Felis_catus
ENSG00000099622CIRBP100100.000ENSFCAG00000013724CIRBP10097.674Felis_catus
ENSG00000099622CIRBP100100.000ENSFALG00000014000CIRBP10080.925Ficedula_albicollis
ENSG00000099622CIRBP100100.000ENSFDAG00000002848CIRBP10097.093Fukomys_damarensis
ENSG00000099622CIRBP10075.000ENSFDAG00000007909RBM310065.882Fukomys_damarensis
ENSG00000099622CIRBP100100.000ENSGALG00000030918CIRBP10095.349Gallus_gallus
ENSG00000099622CIRBP10084.375ENSGAGG00000016473-10072.289Gopherus_agassizii
ENSG00000099622CIRBP10075.000ENSGAGG00000016475RBM310071.084Gopherus_agassizii
ENSG00000099622CIRBP10073.750ENSGGOG00000005864RBM310057.059Gorilla_gorilla
ENSG00000099622CIRBP100100.000ENSGGOG00000002338CIRBP100100.000Gorilla_gorilla
ENSG00000099622CIRBP9363.514ENSGGOG00000025080-9355.556Gorilla_gorilla
ENSG00000099622CIRBP10071.053ENSHGLG00000013635-10057.988Heterocephalus_glaber_female
ENSG00000099622CIRBP10075.000ENSHGLG00000006552RBM310065.294Heterocephalus_glaber_female
ENSG00000099622CIRBP10072.500ENSHGLG00000010919-10062.676Heterocephalus_glaber_female
ENSG00000099622CIRBP100100.000ENSHGLG00000005839CIRBP10097.093Heterocephalus_glaber_female
ENSG00000099622CIRBP10072.500ENSHGLG00100014556-10062.676Heterocephalus_glaber_male
ENSG00000099622CIRBP10071.053ENSHGLG00100015330-10057.988Heterocephalus_glaber_male
ENSG00000099622CIRBP100100.000ENSHGLG00100004955CIRBP10097.093Heterocephalus_glaber_male
ENSG00000099622CIRBP10090.625ENSHGLG00100005516-10073.256Heterocephalus_glaber_male
ENSG00000099622CIRBP10075.000ENSHGLG00100017487-10065.294Heterocephalus_glaber_male
ENSG00000099622CIRBP9483.333ENSIPUG00000007089RBM39961.765Ictalurus_punctatus
ENSG00000099622CIRBP100100.000ENSSTOG00000027646CIRBP10097.674Ictidomys_tridecemlineatus
ENSG00000099622CIRBP10075.000ENSSTOG00000027493-10065.294Ictidomys_tridecemlineatus
ENSG00000099622CIRBP10075.000ENSJJAG00000012962-10063.529Jaculus_jaculus
ENSG00000099622CIRBP100100.000ENSJJAG00000013649Cirbp10095.349Jaculus_jaculus
ENSG00000099622CIRBP9046.795ENSJJAG00000022888-9550.000Jaculus_jaculus
ENSG00000099622CIRBP9685.714ENSLACG00000014490-6379.808Latimeria_chalumnae
ENSG00000099622CIRBP9888.750ENSLOCG00000005031-7381.481Lepisosteus_oculatus
ENSG00000099622CIRBP9591.667ENSLOCG00000000112-8685.577Lepisosteus_oculatus
ENSG00000099622CIRBP9892.308ENSLOCG00000000106-9970.000Lepisosteus_oculatus
ENSG00000099622CIRBP10075.000ENSLAFG00000007003-10065.476Loxodonta_africana
ENSG00000099622CIRBP100100.000ENSLAFG00000032156-10086.047Loxodonta_africana
ENSG00000099622CIRBP10063.158ENSLAFG00000029211-9948.171Loxodonta_africana
ENSG00000099622CIRBP10073.750ENSMFAG00000003694RBM310057.059Macaca_fascicularis
ENSG00000099622CIRBP100100.000ENSMFAG00000034048CIRBP100100.000Macaca_fascicularis
ENSG00000099622CIRBP9973.418ENSMFAG00000003836-8958.462Macaca_fascicularis
ENSG00000099622CIRBP100100.000ENSMMUG00000022101CIRBP100100.000Macaca_mulatta
ENSG00000099622CIRBP9973.418ENSMMUG00000037648-9956.213Macaca_mulatta
ENSG00000099622CIRBP10071.053ENSMMUG00000018349-8270.270Macaca_mulatta
ENSG00000099622CIRBP10073.750ENSMNEG00000042115-10057.059Macaca_nemestrina
ENSG00000099622CIRBP100100.000ENSMNEG00000033116CIRBP100100.000Macaca_nemestrina
ENSG00000099622CIRBP9973.418ENSMNEG00000000984-9956.213Macaca_nemestrina
ENSG00000099622CIRBP100100.000ENSMLEG00000038347CIRBP10099.419Mandrillus_leucophaeus
ENSG00000099622CIRBP9972.152ENSMLEG00000027951-9954.438Mandrillus_leucophaeus
ENSG00000099622CIRBP10073.750ENSMLEG00000041745-10057.059Mandrillus_leucophaeus
ENSG00000099622CIRBP100100.000ENSMGAG00000010253CIRBP8994.706Meleagris_gallopavo
ENSG00000099622CIRBP10071.250ENSMAUG00000008646-10057.857Mesocricetus_auratus
ENSG00000099622CIRBP10098.750ENSMAUG00000002162CIRP10094.767Mesocricetus_auratus
ENSG00000099622CIRBP10075.000ENSMAUG00000016488-10065.294Mesocricetus_auratus
ENSG00000099622CIRBP10075.000ENSMICG00000047440-10063.953Microcebus_murinus
ENSG00000099622CIRBP10073.750ENSMICG00000028982-10057.471Microcebus_murinus
ENSG00000099622CIRBP10065.789ENSMICG00000045835-9854.887Microcebus_murinus
ENSG00000099622CIRBP100100.000ENSMICG00000038000CIRBP10097.093Microcebus_murinus
ENSG00000099622CIRBP10099.048ENSMOCG00000012643Cirbp10094.767Microtus_ochrogaster
ENSG00000099622CIRBP10075.000ENSMOCG00000001511Rbm310064.706Microtus_ochrogaster
ENSG00000099622CIRBP100100.000ENSMODG00000005290CIRBP7593.605Monodelphis_domestica
ENSG00000099622CIRBP10099.048MGP_CAROLIEiJ_G0015568Cirbp10099.074Mus_caroli
ENSG00000099622CIRBP10075.000MGP_CAROLIEiJ_G0032914-9069.136Mus_caroli
ENSG00000099622CIRBP10099.048ENSMUSG00000045193Cirbp10099.074Mus_musculus
ENSG00000099622CIRBP10075.000ENSMUSG00000031167Rbm310064.706Mus_musculus
ENSG00000099622CIRBP10098.750MGP_PahariEiJ_G0030981Cirbp10098.148Mus_pahari
ENSG00000099622CIRBP10075.000MGP_PahariEiJ_G0031463Rbm310064.706Mus_pahari
ENSG00000099622CIRBP10099.048MGP_SPRETEiJ_G0016386Cirbp10099.074Mus_spretus
ENSG00000099622CIRBP10075.000MGP_SPRETEiJ_G0034063Rbm310064.706Mus_spretus
ENSG00000099622CIRBP10075.000ENSMPUG00000013632RBM310064.118Mustela_putorius_furo
ENSG00000099622CIRBP8097.761ENSMPUG00000008455-10084.971Mustela_putorius_furo
ENSG00000099622CIRBP10075.000ENSMLUG00000003996RBM310062.712Myotis_lucifugus
ENSG00000099622CIRBP100100.000ENSMLUG00000015007CIRBP10098.256Myotis_lucifugus
ENSG00000099622CIRBP10075.000ENSNGAG00000012951Rbm310064.706Nannospalax_galili
ENSG00000099622CIRBP10099.048ENSNGAG00000001192Cirbp10095.238Nannospalax_galili
ENSG00000099622CIRBP10071.250ENSNLEG00000019350-10055.294Nomascus_leucogenys
ENSG00000099622CIRBP100100.000ENSNLEG00000028393-100100.000Nomascus_leucogenys
ENSG00000099622CIRBP10062.500ENSNLEG00000031601-10049.664Nomascus_leucogenys
ENSG00000099622CIRBP10073.750ENSNLEG00000028027-10057.647Nomascus_leucogenys
ENSG00000099622CIRBP10098.095ENSODEG00000012711-10097.093Octodon_degus
ENSG00000099622CIRBP10071.053ENSODEG00000009372-10053.788Octodon_degus
ENSG00000099622CIRBP10096.875ENSODEG00000000843-10075.000Octodon_degus
ENSG00000099622CIRBP10075.000ENSODEG00000020479-10065.882Octodon_degus
ENSG00000099622CIRBP10068.750ENSODEG00000019976-10058.824Octodon_degus
ENSG00000099622CIRBP10072.500ENSODEG00000019283-10060.000Octodon_degus
ENSG00000099622CIRBP9770.270ENSODEG00000003511-10048.824Octodon_degus
ENSG00000099622CIRBP10060.526ENSODEG00000003178-9550.296Octodon_degus
ENSG00000099622CIRBP8887.143ENSODEG00000011721-10080.247Octodon_degus
ENSG00000099622CIRBP10071.250ENSODEG00000019234-10061.176Octodon_degus
ENSG00000099622CIRBP8064.029ENSOANG00000012483RBM310059.589Ornithorhynchus_anatinus
ENSG00000099622CIRBP100100.000ENSOANG00000012230CIRBP10094.767Ornithorhynchus_anatinus
ENSG00000099622CIRBP10073.750ENSOCUG00000002271RBM310061.932Oryctolagus_cuniculus
ENSG00000099622CIRBP10057.500ENSOCUG00000027309-6753.846Oryctolagus_cuniculus
ENSG00000099622CIRBP10099.048ENSOGAG00000029550CIRBP10096.532Otolemur_garnettii
ENSG00000099622CIRBP10075.000ENSOGAG00000026654RBM310063.529Otolemur_garnettii
ENSG00000099622CIRBP10072.500ENSOARG00000012250RBM310059.777Ovis_aries
ENSG00000099622CIRBP100100.000ENSOARG00000011412CIRBP8998.256Ovis_aries
ENSG00000099622CIRBP10061.250ENSPPAG00000036405-10055.263Pan_paniscus
ENSG00000099622CIRBP100100.000ENSPPAG00000033562CIRBP100100.000Pan_paniscus
ENSG00000099622CIRBP10073.750ENSPPAG00000034179RBM310057.059Pan_paniscus
ENSG00000099622CIRBP10068.421ENSPPRG00000011438-6863.291Panthera_pardus
ENSG00000099622CIRBP10071.053ENSPPRG00000013361-9065.432Panthera_pardus
ENSG00000099622CIRBP100100.000ENSPPRG00000008838CIRBP10098.256Panthera_pardus
ENSG00000099622CIRBP10075.000ENSPPRG00000013315RBM310063.793Panthera_pardus
ENSG00000099622CIRBP100100.000ENSPTIG00000012111CIRBP10098.256Panthera_tigris_altaica
ENSG00000099622CIRBP10075.000ENSPTIG00000017702RBM310063.793Panthera_tigris_altaica
ENSG00000099622CIRBP10061.250ENSPTIG00000003747-5160.714Panthera_tigris_altaica
ENSG00000099622CIRBP10073.750ENSPTRG00000021864RBM310057.059Pan_troglodytes
ENSG00000099622CIRBP10061.250ENSPTRG00000044048-10055.263Pan_troglodytes
ENSG00000099622CIRBP100100.000ENSPTRG00000010192CIRBP100100.000Pan_troglodytes
ENSG00000099622CIRBP9973.418ENSPANG00000005561-9553.378Papio_anubis
ENSG00000099622CIRBP9972.152ENSPANG00000010520-10056.209Papio_anubis
ENSG00000099622CIRBP10073.750ENSPANG00000034727-10057.059Papio_anubis
ENSG00000099622CIRBP100100.000ENSPANG00000032449CIRBP100100.000Papio_anubis
ENSG00000099622CIRBP10084.375ENSPKIG00000024430CIRBP8374.257Paramormyrops_kingsleyae
ENSG00000099622CIRBP10073.750ENSPSIG00000007145RBM310068.208Pelodiscus_sinensis
ENSG00000099622CIRBP100100.000ENSPSIG00000002812CIRBP10091.329Pelodiscus_sinensis
ENSG00000099622CIRBP10099.048ENSPEMG00000022859Cirbp10095.349Peromyscus_maniculatus_bairdii
ENSG00000099622CIRBP10075.000ENSPEMG00000012411Rbm310065.882Peromyscus_maniculatus_bairdii
ENSG00000099622CIRBP100100.000ENSPCIG00000011223-7295.833Phascolarctos_cinereus
ENSG00000099622CIRBP10096.875ENSPCIG00000015913-8976.786Phascolarctos_cinereus
ENSG00000099622CIRBP10073.750ENSPPYG00000020314RBM310057.059Pongo_abelii
ENSG00000099622CIRBP10060.000ENSPPYG00000000510-8860.465Pongo_abelii
ENSG00000099622CIRBP10073.750ENSPCOG00000017170-9270.886Propithecus_coquereli
ENSG00000099622CIRBP10073.750ENSPCOG00000014346-10058.721Propithecus_coquereli
ENSG00000099622CIRBP10072.500ENSPCOG00000013194-10059.060Propithecus_coquereli
ENSG00000099622CIRBP100100.000ENSPCOG00000028262CIRBP10097.093Propithecus_coquereli
ENSG00000099622CIRBP100100.000ENSPVAG00000005629CIRBP10097.674Pteropus_vampyrus
ENSG00000099622CIRBP10075.000ENSPVAG00000015630RBM310064.706Pteropus_vampyrus
ENSG00000099622CIRBP10075.000ENSRNOG00000005387Rbm310065.294Rattus_norvegicus
ENSG00000099622CIRBP10099.048ENSRNOG00000015999Cirbp10095.349Rattus_norvegicus
ENSG00000099622CIRBP100100.000ENSRBIG00000031290CIRBP100100.000Rhinopithecus_bieti
ENSG00000099622CIRBP10073.750ENSRBIG00000040498RBM310057.059Rhinopithecus_bieti
ENSG00000099622CIRBP10073.750ENSRROG00000034767RBM310057.059Rhinopithecus_roxellana
ENSG00000099622CIRBP100100.000ENSRROG00000022862CIRBP100100.000Rhinopithecus_roxellana
ENSG00000099622CIRBP9762.162ENSRROG00000035651-9748.980Rhinopithecus_roxellana
ENSG00000099622CIRBP10068.750ENSSBOG00000020829-9568.750Saimiri_boliviensis_boliviensis
ENSG00000099622CIRBP10068.750ENSSBOG00000035691-7368.919Saimiri_boliviensis_boliviensis
ENSG00000099622CIRBP10073.750ENSSBOG00000005354-9060.484Saimiri_boliviensis_boliviensis
ENSG00000099622CIRBP100100.000ENSSBOG00000021043CIRBP10097.674Saimiri_boliviensis_boliviensis
ENSG00000099622CIRBP100100.000ENSSHAG00000006035CIRBP10094.186Sarcophilus_harrisii
ENSG00000099622CIRBP10097.368ENSSPUG00000006459CIRBP10085.057Sphenodon_punctatus
ENSG00000099622CIRBP10073.750ENSSPUG00000000444RBM310069.697Sphenodon_punctatus
ENSG00000099622CIRBP10084.375ENSSPUG00000000450-9076.712Sphenodon_punctatus
ENSG00000099622CIRBP10068.421ENSSSCG00000005430-10051.163Sus_scrofa
ENSG00000099622CIRBP10073.750ENSSSCG00000021591-10062.209Sus_scrofa
ENSG00000099622CIRBP10065.000ENSSSCG00000030003-10049.686Sus_scrofa
ENSG00000099622CIRBP100100.000ENSSSCG00000013427CIRBP10097.093Sus_scrofa
ENSG00000099622CIRBP100100.000ENSTGUG00000000884CIRBP10094.611Taeniopygia_guttata
ENSG00000099622CIRBP100100.000ENSTTRG00000011049CIRBP10097.093Tursiops_truncatus
ENSG00000099622CIRBP10073.750ENSTTRG00000008587RBM310064.118Tursiops_truncatus
ENSG00000099622CIRBP10075.000ENSUAMG00000013289RBM310064.706Ursus_americanus
ENSG00000099622CIRBP100100.000ENSUAMG00000014659CIRBP10095.135Ursus_americanus
ENSG00000099622CIRBP10075.000ENSUMAG00000007785RBM310064.706Ursus_maritimus
ENSG00000099622CIRBP100100.000ENSUMAG00000005794CIRBP8395.135Ursus_maritimus
ENSG00000099622CIRBP10075.000ENSVVUG00000017670RBM310063.953Vulpes_vulpes
ENSG00000099622CIRBP100100.000ENSVVUG00000022844-7898.256Vulpes_vulpes
ENSG00000099622CIRBP10071.053ENSVVUG00000006737-9469.512Vulpes_vulpes
ENSG00000099622CIRBP10085.000ENSXETG00000003281cirbp9973.256Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003730mRNA 3'-UTR binding21873635.IBAFunction
GO:0003730mRNA 3'-UTR binding11574538.16513844.IDA