EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
19915612Genetic variants cis-regulating Xrn2 expression contribute to the risk of spontaneous lung tumor.Oncogene2010 Feb 18Lu Ydoi: 10.1038/onc.2009.396
16147866A novel splice variant of human XRN2 gene is mainly expressed in blood leukocyte.DNA Seq2005 AprLi J-
28319071XRN2 promotes EMT and metastasis through regulating maturation of miR-10a.Oncogene2017 Jul 6Zhang Hdoi: 10.1038/onc.2017.39

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2021334075Splice_Regionnovel0.22
BLCAchr2021331608Missense_MutationnovelI208M0.45XRN_N
BLCAchr2021340768SilentnovelA442A0.19
BLCAchr2021340738SilentnovelF432F0.05
BLCAchr2021354828Missense_MutationnovelR659Q0.21
BLCAchr2021386959Missense_MutationnovelG914W0.12
BLCAchr2021382029Missense_MutationnovelP874S0.17
BLCAchr2021332347Missense_MutationNAF255L0.1
BLCAchr2021328565Missense_MutationNAR108C0.21XRN_N
BRCAchr2021326596Missense_MutationNAG104R0.35XRN_N
BRCAchr2021333703Splice_SiteNAX312_splice0.17
BRCAchr2021333781SilentnovelF337F0.09
BRCAchr2021348411Missense_Mutationrs376273044R615Q0.2
BRCAchr2021332440Frame_Shift_InsnovelH287Ifs*60.06
BRCAchr20213033875'UTRrs7690349380.3
CESCchr2021328608Nonsense_MutationNAS122*0.24XRN_N
CESCchr2021354799SilentNAL649L0.57
CESCchr2021333774Nonsense_MutationNAW335*0.32
CESCchr2021386974Missense_MutationNAP919A0.46
CESCchr2021346441Missense_MutationNAR519Q0.41
CESCchr2021365657SilentnovelR803R0.25
CESCchr2021382001SilentnovelR864R0.3
CESCchr2021386953SilentnovelL912L0.38
CESCchr20213894653'UTRrs1114273690.36
CESCchr2021365450Missense_MutationnovelE762V0.09
CESCchr2021348247Silentrs138790989T589T0.17
CESCchr2021303455SilentNAV19V0.36
COADchr2021348410Missense_Mutationrs753036714R615W0.24
COADchr2021356646Nonsense_MutationNAE727*0.41
COADchr2021326316Missense_MutationnovelA38V0.07XRN_N
COADchr2021333550Nonsense_MutationnovelE289*0.15
COADchr20213894003'UTRnovel0.07
COADchr2021331782Missense_MutationnovelD222Y0.22XRN_N
COADchr2021330668Missense_MutationNAD180V0.32XRN_N
COADchr2021365625Missense_Mutationrs377677641R793W0.34
COADchr2021328565Missense_MutationNAR108C0.45XRN_N
COADchr2021333952SilentNAD361D0.53
COADchr2021356109SilentnovelL684L0.04
COADchr2021328587Missense_MutationNAR115H0.27XRN_N
COADchr2021332320Silentrs774996547P246P0.35
COADchr2021346460SilentnovelF525F0.21
COADchr2021340813Silentrs372167550P457P0.38
COADchr2021339068Nonsense_MutationNAE420*0.2
ESCAchr2021386902Missense_Mutationrs769237988R895W0.08
GBMchr2021386983SilentNAR922R0.3
GBMchr20213894033'UTRnovel0.17
GBMchr2021328644Missense_MutationnovelR134Q0.38XRN_N
GBMchr2021344124Missense_MutationnovelS482Y0.21
GBMchr2021332320Silentrs774996547P246P0.21
GBMchr2021348200Missense_MutationnovelD574Y0.21
GBMchr2021333968Nonsense_MutationnovelY367*0.04
HNSCchr2021386903Missense_Mutationrs771948880R895Q0.19
HNSCchr2021348231Missense_MutationnovelD584A0.1
HNSCchr2021326279Missense_MutationnovelP26S0.11XRN_N
HNSCchr2021333547Missense_MutationnovelD288N0.12
HNSCchr2021333548Missense_MutationnovelD288V0.12
HNSCchr2021356095Missense_MutationnovelL679P0.11
HNSCchr2021344119Missense_MutationnovelF480L0.39
HNSCchr2021365588SilentnovelV780V0.23
HNSCchr2021331598Missense_MutationnovelE205G0.3XRN_N
HNSCchr2021354861Missense_MutationnovelT670I0.14
KIRCchr2021356106Missense_MutationNAV683L0.32
KIRCchr2021333775Missense_MutationNAW335C0.28
KIRCchr2021333723Frame_Shift_InsnovelM319Kfs*120.04
KIRCchr2021340822SilentNAA460A0.26
KIRPchr2021340788Missense_MutationnovelP449R0.31
LAMLchr2021365444Missense_MutationnovelF760Y0.11
LGGchr2021346414Splice_SitenovelX510_splice0.11
LGGchr2021356119Missense_MutationNAG687E0.11
LIHCchr2021389308SilentNAP941P0.49
LIHCchr2021382043SilentnovelQ878Q0.16
LIHCchr2021365437Missense_MutationNAP758S0.42
LIHCchr2021332300Missense_MutationnovelG240S0.4XRN_N
LIHCchr20213033725'UTRnovel0.34
LIHCchr2021348389Missense_MutationnovelN608Y0.28
LIHCchr2021331782Missense_MutationnovelD222Y0.45XRN_N
LUADchr2021357738Missense_MutationnovelI734K0.06
LUADchr2021348206Missense_MutationnovelE576Q0.27
LUADchr2021389281SilentnovelP932P0.24
LUADchr2021356626Missense_MutationnovelG720E0.2
LUADchr2021346537Missense_MutationNAR551K0.22
LUADchr2021368526Frame_Shift_DelnovelY841Tfs*100.16
LUADchr2021333583Missense_MutationNAE300Q0.12
LUADchr2021386876Missense_MutationnovelG886V0.17
LUADchr2021365614Missense_MutationNAS789C0.16
LUADchr2021348395Missense_MutationNAL610I0.4
LUSCchr2021328628Missense_MutationnovelA129T0.26XRN_N
LUSCchr20213894203'UTRnovel0.5
LUSCchr2021346491Missense_Mutationrs148676805R536W0.05
LUSCchr2021344138Missense_MutationnovelS487P0.11
LUSCchr2021332415Missense_MutationnovelG278V0.2
LUSCchr2021326293SilentnovelN30N0.21
LUSCchr2021382016Missense_MutationnovelW869C0.48
LUSCchr2021365605Missense_MutationnovelW786L0.24
LUSCchr2021334104SilentNAV384V0.1
LUSCchr2021333563Missense_MutationnovelS293I0.51
LUSCchr2021326313Missense_MutationnovelD37G0.09XRN_N
LUSCchr2021368569Nonsense_MutationNAQ855*0.35
LUSCchr2021346500Missense_MutationnovelV539M0.08
LUSCchr2021331594Missense_MutationnovelG204R0.1XRN_N
LUSCchr2021344148Missense_MutationnovelG490A0.26
LUSCchr2021326569Missense_MutationnovelR95G0.27XRN_N
LUSCchr2021356158Missense_MutationnovelY700C0.42
LUSCchr2021331571Missense_MutationnovelS196F0.23XRN_N
OVchr2021346460Missense_MutationnovelF525L0.04
PAADchr2021326289Missense_Mutationrs373315919C29Y0.15XRN_N
PAADchr2021333762Missense_MutationnovelS331I0.19
PAADchr2021365580Missense_MutationnovelA778S0.16
READchr2021332320Silentrs774996547P246P0.3
READchr2021339060Missense_MutationNAR417Q0.15
READchr20213033415'UTRnovel0.52
READchr20213893823'UTRnovel0.28
READchr2021333580Nonsense_MutationnovelG299*0.38
READchr2021386989Missense_MutationNAD924Y0.1
READchr2021330515Missense_MutationNAR154S0.43XRN_N
READchr2021348413Missense_MutationNAK616E0.52
SKCMchr2021354836SilentNAL662L0.17
SKCMchr20213893403'UTRnovel0.23
SKCMchr2021333613Missense_MutationNAR310C0.29
SKCMchr2021330506SilentnovelI151I0.31
SKCMchr2021382026Missense_MutationnovelP873S0.21
SKCMchr2021333960Missense_MutationnovelV364A0.29
SKCMchr2021368534Missense_MutationNAG843A0.27
SKCMchr2021333753Missense_MutationNAV328A0.3
SKCMchr2021348225Missense_MutationNAP582L0.32
SKCMchr2021389278Nonsense_MutationNAY931*0.09
SKCMchr2021333825Missense_MutationNAS352L0.11
SKCMchr2021354850SilentNAY666Y0.25
SKCMchr2021330627SilentNAF166F0.15
STADchr2021332347SilentNAF255F0.18
STADchr2021332346Missense_MutationnovelF255Y0.41
STADchr2021326312Missense_MutationNAD37N0.15XRN_N
STADchr2021389326SilentnovelY947Y0.24
STADchr2021348365Missense_MutationNAG600R0.03
STADchr2021365638Missense_MutationNAP797R0.17
STADchr2021326491Missense_MutationNAP69A0.11XRN_N
STADchr2021331583Missense_MutationNAA200V0.41XRN_N
STADchr2021389283Missense_Mutationrs774005334R933K0.34
STADchr2021357751SilentnovelP738P0.16
STADchr2021386897Missense_MutationNAW893L0.1
STADchr2021365607Frame_Shift_InsnovelS789Ifs*140.19
STADchr2021348253Splice_RegionNAP591P0.16
STADchr2021344094Missense_MutationNAP472L0.31
STADchr2021340751Missense_MutationNAI437L0.13
STADchr2021334077Splice_SiteNAX376_splice0.07
STADchr2021386902Missense_Mutationrs769237988R895W0.32
STADchr2021326520Missense_MutationNAM78I0.11XRN_N
STADchr2021326580SilentNAL98L0.58
STADchr2021328656Missense_MutationNAE138G0.13XRN_N
STADchr2021326356SilentnovelL51L0.35
TGCTchr2021339060Missense_MutationNAR417Q0.27
UCECchr2021339075Missense_MutationNAR422I0.31
UCECchr2021389322Missense_MutationNAR946K0.3
UCECchr2021332342Nonsense_MutationNAE254*0.27XRN_N
UCECchr2021344137Silentrs201613539P486P0.4
UCECchr2021348179Missense_MutationNAH567N0.38
UCECchr2021357773Missense_MutationnovelT746P0.29
UCECchr2021333825Missense_MutationNAS352L0.4
UCECchr2021328612SilentnovelK123K0.4
UCECchr2021328566Missense_MutationNAR108H0.57XRN_N
UCECchr2021326285Nonsense_MutationNAE28*0.43XRN_N
UCECchr2021326319Missense_MutationNAS39N0.2XRN_N
UCECchr2021330702SilentNAL191L0.2
UCECchr2021333954Missense_Mutationrs371978482R362H0.41
UCECchr2021326310Missense_MutationNAV36A0.36XRN_N
UCECchr2021326403Missense_MutationNAD67G0.14XRN_N
UCECchr2021356631Missense_MutationNAF722L0.24
UCECchr2021344094Missense_MutationNAP472L0.57
UCECchr2021389311SilentnovelP942P0.19
UCECchr2021346441Missense_MutationNAR519Q0.33
UCECchr20213897283'UTRnovel0.31
UCECchr2021332426Nonsense_MutationnovelE282*0.16
UCECchr2021346537Missense_MutationNAR551I0.19
UCECchr2021356635Missense_MutationNAS723Y0.12
UCECchr2021332320Silentrs774996547P246P0.42
UCECchr2021339068Nonsense_MutationNAE420*0.4
UCECchr2021357735Splice_SitenovelX733_splice0.45
UCECchr2021382046Missense_MutationnovelQ879H0.06
UCECchr20213897783'UTRnovel0.06
UCECchr2021333750Missense_MutationnovelD327A0.39
UCECchr2021346522Missense_MutationnovelL546R0.43
UCECchr2021356092Missense_MutationnovelS678N0.32
UCECchr2021333716Nonsense_MutationnovelE316*0.41
UCECchr2021357740Missense_MutationnovelV735I0.38
UCECchr20213894413'UTRnovel0.4
UCECchr20213897953'UTRnovel0.46
UCECchr2021326302Missense_MutationNAK33N0.48XRN_N
UCECchr2021348367Silentrs776581644G600G0.26
UCECchr2021365647Missense_MutationNAG800D0.4
UCECchr2021346511Silentrs143832454Y542Y0.47
UCECchr2021332426Nonsense_MutationnovelE282*0.32
UCECchr2021333579Silentrs199788463E298E0.18
UCECchr2021333560Missense_MutationnovelD292A0.44
UCECchr2021333608Missense_MutationnovelV308D0.07
UCECchr2021340812Missense_Mutationrs139083502P457L0.49
UCECchr2021328642SilentnovelQ133Q0.3
UCECchr2021368498Missense_MutationnovelY831C0.37
UCECchr2021389322Missense_MutationnovelR946I0.5
UCECchr20213897953'UTRnovel0.49
UCECchr2021344098Silentrs535403975S473S0.37
UCECchr20213895853'UTRnovel0.36
UCECchr2021331804Missense_MutationnovelL229S0.07XRN_N
UCECchr2021332320Silentrs774996547P246P0.31
UCECchr2021326600Missense_MutationNAV105A0.17XRN_N
UCECchr20213897953'UTRnovel0.25
UCECchr2021328628Missense_MutationNAA129S0.29XRN_N
UCECchr2021356159SilentNAY700Y0.3
UCECchr2021328608Missense_MutationnovelS122L0.44XRN_N
UCECchr2021365635In_Frame_InsnovelL799_G800insTASSASQVHAIPLPQL0.02
UCECchr20213897953'UTRnovel0.36
UCECchr2021346451Missense_Mutationrs138301797K522N0.39
UCECchr2021346537Missense_MutationNAR551I0.17
UCECchr2021332320Silentrs774996547P246P0.15
UCECchr2021356635Missense_MutationNAS723Y0.34
UCECchr20213895573'UTRnovel0.4
UCECchr2021326596Missense_MutationNAG104R0.26XRN_N
UCECchr2021382017Nonsense_Mutationrs756100274R870*0.21
UCECchr20213894843'UTRnovel0.43
UCECchr2021344145Missense_MutationnovelL489S0.33
UCECchr20213897953'UTRnovel0.38
UCECchr2021331781SilentNAH221H0.36
UCECchr2021333991SilentNAT374T0.32
UCECchr2021348416Missense_MutationNAL617I0.27
UCECchr2021389327Missense_MutationnovelN948D0.04
UCECchr2021365680Missense_MutationnovelD811G0.28
UCECchr20213897413'UTRnovel0.41
UCECchr20213894053'UTRnovel0.48

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.12220.030954
PAADAMP0.1250.0668

Survival Analysis
CancerP-value Q-value
KIRC0.0022

Kaplan-Meier Survival Analysis

SARC0.0062

Kaplan-Meier Survival Analysis

MESO0.037

Kaplan-Meier Survival Analysis

SKCM0.0031

Kaplan-Meier Survival Analysis

PAAD0.0058

Kaplan-Meier Survival Analysis

READ0.0022

Kaplan-Meier Survival Analysis

KICH0.011

Kaplan-Meier Survival Analysis

LIHC0.00011

Kaplan-Meier Survival Analysis

LGG0.00011

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000088930 (Gene tree)
Gene ID
22803
Gene Symbol
XRN2
Alias
N
Full Name
5'-3' exoribonuclease 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
86,524 bases
Position
chr20:21,303,304-21,389,827
Accession
12836
RBP type
canonical RBP
Summary
This gene encodes a 5'-3' exonuclease that promotes transcription termination at cotranscriptional cleavage sites. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2015]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000366396XRN_NPF03159.183.4e-10211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
30374086SAMMSON fosters cancer cell fitness by concertedly enhancing mitochondrial and cytosolic translation.Nat Struct Mol Biol2018 NovVendramin Rdoi: 10.1038/s41594-018-0143-4
25110015Regulation of miRNA strand selection: follow the leader?Biochem Soc Trans2014 AugMeijer HAdoi: 10.1042/BST20140142.
23857582Heterogeneous nuclear ribonucleoprotein (HnRNP) K genome-wide binding survey reveals its role in regulating 3'-end RNA processing and transcription termination at the early growth response 1 (EGR1) gene through XRN2 exonuclease.J Biol Chem2013 Aug 23Mikula Mdoi: 10.1074/jbc.M113.496679
27331609Regulation of alternative polyadenylation by Nkx2-5 and Xrn2 during mouse heart development.Elife2016 Jun 22Nimura Kdoi: 10.7554/eLife.16030.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000377191XRN2-2013437XM_017027723ENSP00000366396950 (aa)XP_016883212Q9H0D6
Gene Model
Click here to download ENSG00000088930's gene model file
Pathways
Pathway IDPathway NameSource
hsa03008Ribosome biogenesis in eukaryotesKEGG
hsa03018RNA degradationKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000088930Child Development Disorders, Pervasive2.0376000E-005-
ENSG00000088930Blood Pressure1.2358817E-005-
ENSG00000088930Blood Pressure1.2453503E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000088930rs99174572021349312GMean corpuscular hemoglobin27863252[0.032-0.063] unit increase0.04755121EFO_0004527
ENSG00000088930rs622179592021382323?Mean corpuscular hemoglobin30595370EFO_0004527
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000088930's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000088930XRN27139.912ENSG00000114127XRN19650.820
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000088930XRN29771.596ENSAPOG00000009818xrn210070.438Acanthochromis_polyacanthus
ENSG00000088930XRN210097.895ENSAMEG00000012581XRN210097.895Ailuropoda_melanoleuca
ENSG00000088930XRN29070.535ENSACIG00000015047xrn29574.280Amphilophus_citrinellus
ENSG00000088930XRN29771.902ENSAOCG00000023632xrn210070.761Amphiprion_ocellaris
ENSG00000088930XRN29771.732ENSAPEG00000014871xrn210070.570Amphiprion_percula
ENSG00000088930XRN29571.506ENSATEG00000001273xrn29770.825Anabas_testudineus
ENSG00000088930XRN29782.885ENSAPLG00000013869XRN29983.333Anas_platyrhynchos
ENSG00000088930XRN210080.538ENSACAG00000005565XRN210080.538Anolis_carolinensis
ENSG00000088930XRN210098.632ENSANAG00000020126XRN210098.632Aotus_nancymaae
ENSG00000088930XRN29073.757ENSACLG00000010522xrn29675.833Astatotilapia_calliptera
ENSG00000088930XRN210071.617ENSAMXG00000018301xrn210071.617Astyanax_mexicanus
ENSG00000088930XRN210095.794ENSBTAG00000011304XRN210095.794Bos_taurus
ENSG00000088930XRN28755.814WBGene00006964xrn-28955.090Caenorhabditis_elegans
ENSG00000088930XRN210098.737ENSCJAG00000005611XRN210098.737Callithrix_jacchus
ENSG00000088930XRN210098.000ENSCAFG00000005185XRN210098.000Canis_familiaris
ENSG00000088930XRN210098.000ENSCAFG00020027479XRN210098.000Canis_lupus_dingo
ENSG00000088930XRN210096.320ENSCHIG00000006921XRN210096.320Capra_hircus
ENSG00000088930XRN210097.053ENSTSYG00000008315XRN210097.053Carlito_syrichta
ENSG00000088930XRN29781.985ENSCAPG00000010773XRN29981.985Cavia_aperea
ENSG00000088930XRN210097.579ENSCPOG00000009407XRN210097.579Cavia_porcellus
ENSG00000088930XRN210099.684ENSCATG00000040350XRN210099.684Cercocebus_atys
ENSG00000088930XRN210097.895ENSCLAG00000013419XRN210097.895Chinchilla_lanigera
ENSG00000088930XRN210099.684ENSCSAG00000011094XRN210099.684Chlorocebus_sabaeus
ENSG00000088930XRN26898.925ENSCHOG00000013404XRN27098.925Choloepus_hoffmanni
ENSG00000088930XRN210084.271ENSCPBG00000023533XRN210084.896Chrysemys_picta_bellii
ENSG00000088930XRN28660.143ENSCING00000022336-10060.501Ciona_intestinalis
ENSG00000088930XRN28758.831ENSCSAVG00000011217-10061.407Ciona_savignyi
ENSG00000088930XRN210099.684ENSCANG00000040240XRN210099.684Colobus_angolensis_palliatus
ENSG00000088930XRN29896.878ENSCGRG00001010676Xrn29996.878Cricetulus_griseus_chok1gshd
ENSG00000088930XRN29796.009ENSCGRG00000006378Xrn29996.009Cricetulus_griseus_crigri
ENSG00000088930XRN25472.157ENSCSEG00000005628xrn210072.157Cynoglossus_semilaevis
ENSG00000088930XRN28971.494ENSCVAG00000018999xrn29876.762Cyprinodon_variegatus
ENSG00000088930XRN210069.815ENSDARG00000101900xrn29677.629Danio_rerio
ENSG00000088930XRN210097.474ENSDNOG00000001895XRN210097.474Dasypus_novemcinctus
ENSG00000088930XRN210095.684ENSDORG00000005434Xrn210095.684Dipodomys_ordii
ENSG00000088930XRN28756.832FBgn0031868Rat18756.711Drosophila_melanogaster
ENSG00000088930XRN210083.684ENSETEG00000001740XRN210083.684Echinops_telfairi
ENSG00000088930XRN28471.636ENSEBUG00000016136xrn210071.636Eptatretus_burgeri
ENSG00000088930XRN210097.684ENSEASG00005002484XRN210097.684Equus_asinus_asinus
ENSG00000088930XRN29997.888ENSECAG00000018988XRN296100.000Equus_caballus
ENSG00000088930XRN280100.000ENSEEUG00000009265XRN280100.000Erinaceus_europaeus
ENSG00000088930XRN210070.389ENSELUG00000000552xrn210070.799Esox_lucius
ENSG00000088930XRN210097.789ENSFCAG00000007970XRN210097.789Felis_catus
ENSG00000088930XRN210082.390ENSFALG00000004508XRN210082.827Ficedula_albicollis
ENSG00000088930XRN210097.684ENSFDAG00000016311XRN210097.684Fukomys_damarensis
ENSG00000088930XRN25469.466ENSFHEG00000013039xrn29869.466Fundulus_heteroclitus
ENSG00000088930XRN28672.661ENSGMOG00000013436xrn210072.661Gadus_morhua
ENSG00000088930XRN210082.513ENSGALG00000008372XRN210082.513Gallus_gallus
ENSG00000088930XRN28973.721ENSGAFG00000014284xrn29873.721Gambusia_affinis
ENSG00000088930XRN28774.519ENSGACG00000011870xrn210074.519Gasterosteus_aculeatus
ENSG00000088930XRN210084.062ENSGAGG00000004884XRN210084.688Gopherus_agassizii
ENSG00000088930XRN210099.789ENSGGOG00000013738XRN210099.789Gorilla_gorilla
ENSG00000088930XRN25474.280ENSHBUG00000005077xrn29675.833Haplochromis_burtoni
ENSG00000088930XRN210096.526ENSHGLG00000014831XRN210096.526Heterocephalus_glaber_female
ENSG00000088930XRN210096.526ENSHGLG00100013130XRN210096.526Heterocephalus_glaber_male
ENSG00000088930XRN29968.016ENSHCOG00000011994xrn29968.927Hippocampus_comes
ENSG00000088930XRN210070.031ENSIPUG00000006639xrn210070.031Ictalurus_punctatus
ENSG00000088930XRN210098.316ENSSTOG00000000589XRN210098.316Ictidomys_tridecemlineatus
ENSG00000088930XRN210097.474ENSJJAG00000022128Xrn210097.474Jaculus_jaculus
ENSG00000088930XRN25479.492ENSLBEG00000010041xrn210079.492Labrus_bergylta
ENSG00000088930XRN29476.752ENSLACG00000008307XRN29979.264Latimeria_chalumnae
ENSG00000088930XRN29972.803ENSLOCG00000016874xrn210072.803Lepisosteus_oculatus
ENSG00000088930XRN210096.316ENSLAFG00000014624XRN210096.316Loxodonta_africana
ENSG00000088930XRN210099.684ENSMFAG00000038122XRN210099.684Macaca_fascicularis
ENSG00000088930XRN210099.684ENSMMUG00000011405XRN210099.684Macaca_mulatta
ENSG00000088930XRN210099.579ENSMNEG00000040626XRN210099.579Macaca_nemestrina
ENSG00000088930XRN210099.579ENSMLEG00000041897XRN210099.579Mandrillus_leucophaeus
ENSG00000088930XRN29572.579ENSMAMG00000008633xrn29871.069Mastacembelus_armatus
ENSG00000088930XRN29075.607ENSMZEG00005022362xrn29775.607Maylandia_zebra
ENSG00000088930XRN29981.042ENSMGAG00000003196XRN29981.042Meleagris_gallopavo
ENSG00000088930XRN210096.947ENSMAUG00000021842Xrn210096.947Mesocricetus_auratus
ENSG00000088930XRN210097.368ENSMICG00000008126XRN210097.368Microcebus_murinus
ENSG00000088930XRN210096.211ENSMOCG00000012588Xrn210096.211Microtus_ochrogaster
ENSG00000088930XRN28973.769ENSMMOG00000017576xrn29674.053Mola_mola
ENSG00000088930XRN210091.158ENSMODG00000006163XRN210091.158Monodelphis_domestica
ENSG00000088930XRN29172.022ENSMALG00000011355xrn29972.022Monopterus_albus
ENSG00000088930XRN210095.794MGP_CAROLIEiJ_G0024400Xrn210095.794Mus_caroli
ENSG00000088930XRN210096.004ENSMUSG00000027433Xrn210096.004Mus_musculus
ENSG00000088930XRN210095.794MGP_PahariEiJ_G0025843Xrn210095.794Mus_pahari
ENSG00000088930XRN210096.004MGP_SPRETEiJ_G0025318Xrn210096.004Mus_spretus
ENSG00000088930XRN210096.381ENSMPUG00000001198XRN29396.381Mustela_putorius_furo
ENSG00000088930XRN210097.789ENSMLUG00000001536XRN210097.789Myotis_lucifugus
ENSG00000088930XRN210097.474ENSNGAG00000018138Xrn210097.474Nannospalax_galili
ENSG00000088930XRN29075.810ENSNBRG00000008062xrn29775.810Neolamprologus_brichardi
ENSG00000088930XRN210099.579ENSNLEG00000009991XRN210099.579Nomascus_leucogenys
ENSG00000088930XRN26697.778ENSMEUG00000008622-6797.778Notamacropus_eugenii
ENSG00000088930XRN27578.534ENSOPRG00000001397-7778.534Ochotona_princeps
ENSG00000088930XRN210097.579ENSODEG00000010745-10097.579Octodon_degus
ENSG00000088930XRN29888.565ENSODEG00000000860-9988.997Octodon_degus
ENSG00000088930XRN210071.753ENSONIG00000018720xrn210071.959Oreochromis_niloticus
ENSG00000088930XRN210090.966ENSOANG00000015673XRN210090.966Ornithorhynchus_anatinus
ENSG00000088930XRN210098.316ENSOCUG00000013468XRN210098.316Oryctolagus_cuniculus
ENSG00000088930XRN29870.301ENSORLG00000017213xrn29774.942Oryzias_latipes
ENSG00000088930XRN29870.301ENSORLG00020001824xrn210070.000Oryzias_latipes_hni
ENSG00000088930XRN29870.093ENSORLG00015019747xrn210069.796Oryzias_latipes_hsok
ENSG00000088930XRN29073.988ENSOMEG00000019820xrn210069.543Oryzias_melastigma
ENSG00000088930XRN210097.476ENSOGAG00000001068XRN210097.476Otolemur_garnettii
ENSG00000088930XRN29796.220ENSOARG00000004443XRN210096.220Ovis_aries
ENSG00000088930XRN210099.789ENSPPAG00000033549XRN210099.789Pan_paniscus
ENSG00000088930XRN210097.789ENSPPRG00000008732XRN210097.789Panthera_pardus
ENSG00000088930XRN29797.730ENSPTIG00000015683XRN29797.730Panthera_tigris_altaica
ENSG00000088930XRN210099.789ENSPTRG00000013308XRN210099.789Pan_troglodytes
ENSG00000088930XRN210099.684ENSPANG00000018088XRN210099.684Papio_anubis
ENSG00000088930XRN210070.727ENSPKIG00000016889xrn210070.727Paramormyrops_kingsleyae
ENSG00000088930XRN28186.849ENSPSIG00000014666XRN210086.849Pelodiscus_sinensis
ENSG00000088930XRN210096.211ENSPEMG00000000111Xrn210096.211Peromyscus_maniculatus_bairdii
ENSG00000088930XRN210069.990ENSPFOG00000004182xrn29970.393Poecilia_formosa
ENSG00000088930XRN28974.419ENSPLAG00000007351xrn29674.419Poecilia_latipinna
ENSG00000088930XRN29468.335ENSPMEG00000011798xrn29969.206Poecilia_mexicana
ENSG00000088930XRN28974.302ENSPREG00000012452xrn29972.727Poecilia_reticulata
ENSG00000088930XRN210099.158ENSPPYG00000010755XRN210099.158Pongo_abelii
ENSG00000088930XRN210091.387ENSPCAG00000011191XRN210091.387Procavia_capensis
ENSG00000088930XRN210090.947ENSPCOG00000016468XRN210090.947Propithecus_coquereli
ENSG00000088930XRN29396.049ENSPVAG00000004596XRN29396.049Pteropus_vampyrus
ENSG00000088930XRN29073.757ENSPNYG00000001765xrn29773.757Pundamilia_nyererei
ENSG00000088930XRN210071.633ENSPNAG00000010956xrn29971.633Pygocentrus_nattereri
ENSG00000088930XRN210096.740ENSRNOG00000011785Xrn210096.740Rattus_norvegicus
ENSG00000088930XRN28699.633ENSRBIG00000036193XRN210099.633Rhinopithecus_bieti
ENSG00000088930XRN210099.684ENSRROG00000044400XRN29099.684Rhinopithecus_roxellana
ENSG00000088930XRN27748.069YOR048CRAT16353.846Saccharomyces_cerevisiae
ENSG00000088930XRN210098.947ENSSBOG00000021014XRN210098.947Saimiri_boliviensis_boliviensis
ENSG00000088930XRN210071.827ENSSFOG00015001091xrn210071.827Scleropages_formosus
ENSG00000088930XRN29272.686ENSSMAG00000007834xrn210068.389Scophthalmus_maximus
ENSG00000088930XRN29171.946ENSSDUG00000012802xrn29972.285Seriola_dumerili
ENSG00000088930XRN29373.559ENSSLDG00000021273xrn210073.559Seriola_lalandi_dorsalis
ENSG00000088930XRN276100.000ENSSARG00000005859-76100.000Sorex_araneus
ENSG00000088930XRN29879.274ENSSPUG00000005485XRN29679.380Sphenodon_punctatus
ENSG00000088930XRN210070.522ENSSPAG00000016027xrn29970.522Stegastes_partitus
ENSG00000088930XRN210095.579ENSSSCG00000007109XRN210095.579Sus_scrofa
ENSG00000088930XRN210081.211ENSTGUG00000007535XRN210081.648Taeniopygia_guttata
ENSG00000088930XRN210068.214ENSTRUG00000015489xrn210068.586Takifugu_rubripes
ENSG00000088930XRN210071.340ENSTNIG00000010712xrn210071.340Tetraodon_nigroviridis
ENSG00000088930XRN210097.053ENSTBEG00000004119XRN210097.053Tupaia_belangeri
ENSG00000088930XRN29397.477ENSTTRG00000009087XRN29397.477Tursiops_truncatus
ENSG00000088930XRN210098.000ENSUAMG00000024634XRN210098.000Ursus_americanus
ENSG00000088930XRN29797.730ENSUMAG00000004012XRN29597.730Ursus_maritimus
ENSG00000088930XRN28989.586ENSVPAG00000010694XRN29189.586Vicugna_pacos
ENSG00000088930XRN210098.105ENSVVUG00000012178XRN210098.105Vulpes_vulpes
ENSG00000088930XRN210074.453ENSXETG00000023501xrn210075.078Xenopus_tropicalis
ENSG00000088930XRN210068.551ENSXMAG00000000242xrn29278.589Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:00001753'-5'-exoribonuclease activity23482395.EXPFunction
GO:0000738DNA catabolic process, exonucleolytic15565158.IDAProcess
GO:0001147transcription termination site sequence-specific DNA binding21700224.IDAFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0004518nuclease activity10409438.TASFunction
GO:00045345'-3' exoribonuclease activity10409438.TASFunction
GO:0005515protein binding23125361.26496610.26700805.26779609.IPIFunction
GO:0005634nucleus-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus12429849.IDAComponent
GO:0006353DNA-templated transcription, termination-IEAProcess
GO:0006364rRNA processing-TASProcess
GO:0006396RNA processing10409438.TASProcess
GO:0006397mRNA processing-IEAProcess
GO:0006401RNA catabolic process10409438.TASProcess
GO:0007283spermatogenesis10409438.IEPProcess
GO:00084095'-3' exonuclease activity15565158.IDAFunction
GO:0016020membrane19946888.HDAComponent
GO:0016070RNA metabolic process-ISSProcess
GO:0016235aggresome-IDAComponent
GO:0021766hippocampus development-IEAProcess
GO:0030182neuron differentiation-IEAProcess
GO:0046872metal ion binding-IEAFunction
GO:0060041retina development in camera-type eye-IEAProcess
GO:0090503RNA phosphodiester bond hydrolysis, exonucleolytic-IEAProcess
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