EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
19585652Overexpression of far upstream element binding proteins: a mechanism regulating proliferation and migration in liver cancer cells.Hepatology2009 OctMalz Mdoi: 10.1002/hep.23051.
26810065The far-upstream element-binding protein 2 is correlated with proliferation and doxorubicin resistance in human breast cancer cell lines.Tumour Biol2016 JulWang YYdoi: 10.1007/s13277-016-4819-2
15514971IL-1beta induces stabilization of IL-8 mRNA in malignant breast cancer cells via the 3' untranslated region: Involvement of divergent RNA-binding factors HuR, KSRP and TIAR.Int J Cancer2005 Mar 1Suswam EA-
27644194KH-type splicing regulatory protein (KHSRP) contributes to tumorigenesis by promoting miR-26a maturation in small cell lung cancer.Mol Cell Biochem2016 NovTong L-

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr196416651Splice_SitenovelX443_splice0.55
BLCAchr196418048Missense_Mutationrs763165761R304Q0.19
BLCAchr196418745Missense_MutationnovelG246V0.15
BLCAchr196418737Missense_MutationnovelI249F0.13
BRCAchr196422371Missense_MutationNAF105L0.24
BRCAchr196415886Frame_Shift_InsNAP537Afs*250.69
BRCAchr196415302Splice_SitenovelX656_splice0.63
BRCAchr196416400Missense_MutationNAL499P0.63
CESCchr1964139263'UTRnovel0.27
CESCchr196418789SilentnovelQ231Q0.12
CESCchr1964136363'UTRnovel0.44
CESCchr1964140193'UTRnovel0.3
CESCchr1964118623'Flanknovel0.09
CESCchr196415411SilentnovelT645T0.49
COADchr196421648Splice_SiteNAX129_splice0.3
COADchr196416842Missense_MutationNAP408R0.18
COADchr196416493Silentrs769685889I495I0.22
COADchr196422411Missense_MutationnovelA92V0.17
COADchr196415173Frame_Shift_DelNAQ699Sfs*240.35
COADchr196417815Silentrs555066011G335G0.22
COADchr196416784Missense_MutationnovelM427I0.35
COADchr196418822Frame_Shift_InsnovelG221Rfs*370.43
COADchr196416842Missense_Mutationrs758290639P408L0.34
COADchr196416545Missense_MutationnovelR478L0.08
COADchr196418043Missense_MutationNAR306C0.25
COADchr196417815Silentrs555066011G335G0.28
COADchr196416519Missense_MutationnovelA487T0.24
COADchr196418842Missense_MutationNAR214W0.53
COADchr196415241Missense_MutationNAA676V0.28
COADchr196415280Frame_Shift_DelnovelG663Vfs*600.14
ESCAchr1964118553'Flanknovel0.33
ESCAchr1964135003'UTRnovel0.39
GBMchr196420472Splice_SiteNAX142_splice0.24
GBMchr196418531Silentrs201647817T277T0.45
GBMchr196416408Splice_SiteNAX497_splice0.14
GBMchr196418502Missense_MutationNAG287E0.19
HNSCchr196416872Missense_MutationnovelP398R0.27
HNSCchr196416868SilentnovelG399G0.19
HNSCchr196422357Missense_MutationnovelR110K0.15
LGGchr196416884Splice_SiteNAX395_splice0.29
LIHCchr196416506Missense_MutationNAI491T0.41
LIHCchr196420125SilentNAE165E0.38
LIHCchr196416819Missense_Mutationrs764189159G416S0.4
LUADchr196422360Missense_Mutationrs201259560K109R0.22
LUADchr196420429SilentNAV156V0.52
LUADchr196416543Missense_MutationnovelG479R0.5
LUADchr196415169Missense_Mutationrs779255957P700L0.18
LUADchr196418048Missense_MutationNAR304L0.37
LUADchr196422404Silentrs539731278T94T0.2
LUADchr196417793Missense_MutationnovelE343Q0.21
LUADchr1964140863'UTRnovel0.27
LUADchr196418500Missense_MutationNAD288H0.11
LUSCchr196416614Missense_MutationnovelG455E0.12
LUSCchr196418720Missense_Mutationrs577750058E254D0.19
LUSCchr196422359Missense_MutationNAK109N0.18
LUSCchr196418702Missense_MutationnovelQ260H0.4
LUSCchr196417021Missense_MutationnovelA383G0.13
LUSCchr196420423Splice_RegionNAL158L0.26
LUSCchr196418809Missense_MutationnovelD225Y0.52
LUSCchr196418049Missense_MutationnovelR304W0.21
LUSCchr196416832SilentnovelR411R0.53
LUSCchr196417811Frame_Shift_DelnovelV337Sfs*80.14
OVchr196417069Frame_Shift_InsnovelE367Afs*1190.05
OVchr1964140923'UTRnovel0.53
PAADchr196417807Missense_MutationnovelI338T0.07
PRADchr196415301Missense_Mutationrs765792194A656V0.28
READchr196416305Missense_MutationNAP531S0.23
READchr196418018Missense_MutationnovelR314Q0.35
SARCchr196416537Missense_MutationnovelP481S0.24
SARCchr196422341Splice_RegionnovelG115G0.53
SARCchr196418750Frame_Shift_InsnovelA245Gfs*130.5
SKCMchr196418813Silentrs747615967F223F0.42
SKCMchr196418582Splice_SitenovelX261_splice0.28
SKCMchr196421683Missense_MutationNAP118S0.23
SKCMchr196418729SilentNAK251K0.11
SKCMchr196418791Nonsense_MutationNAQ231*0.5
STADchr196415384SilentnovelK654K0.27
STADchr196417044SilentNAP375P0.1
STADchr196416493Silentrs769685889I495I0.5
STADchr196417757Missense_MutationnovelR355W0.52
STADchr196418511Missense_MutationNAR284H0.11
STADchr196422383SilentnovelP101P0.18
UCECchr1964141083'UTRrs3735314670.38
UCECchr196416493Silentrs769685889I495I0.37
UCECchr196422415Missense_MutationNAD91N0.31
UCECchr1964118833'Flanknovel0.38
UCECchr196417815Silentrs555066011G335G0.14
UCECchr196418002SilentNAS319S0.38
UCECchr196416843Missense_Mutationrs779852581P408S0.42
UCECchr196416836Frame_Shift_DelnovelG410Afs*180.26
UCECchr196422404Silentrs539731278T94T0.39
UCECchr1964133833'UTRnovel0.76
UCECchr196418030Missense_MutationnovelG310D0.35
UCECchr196415139Splice_SitenovelX709_splice0.22
UCECchr1964117423'Flankrs7694015470.37
UCECchr196416493Silentrs769685889I495I0.31
UCECchr196417026Silentrs372826447H381H0.15
UCECchr196418546SilentNAD272D0.1
UCECchr196419240Missense_MutationnovelR190C0.22
UCECchr196417788Missense_MutationnovelM344I0.15
UCECchr196419256Silentrs199705336S184S0.43
UCECchr196419256Silentrs199705336S184S0.53
UCECchr196417060Missense_MutationnovelA370D0.37
UCECchr196418001Missense_MutationNAR320W0.12
UCECchr196416754SilentnovelG437G0.48
UCECchr196416850SilentnovelG405G0.21
UCECchr1964117483'Flankrs5686550610.25
UCECchr1964133453'Flankrs5763743420.38
UCECchr196416741Nonsense_MutationnovelR442*0.4
UCECchr196417076Missense_MutationNAG365W0.26
UCECchr196416330SilentnovelP522P0.28
UCECchr196415535Splice_Regionrs747810170I629I0.48
UCECchr1964123203'Flanknovel0.54
UCECchr1964133923'UTRnovel0.35
UCECchr196416606Missense_MutationnovelV458I0.41
UCECchr196420107SilentnovelQ171Q0.4
UCECchr196417757Missense_MutationnovelR355W0.31
UCECchr196422416Silentrs755058483G90G0.34
UCECchr196417815Silentrs555066011G335G0.51
UCECchr1964140043'UTRnovel0.26
UCECchr196418532Missense_Mutationrs765261230T277M0.44
UCECchr196416793Silentrs374401627G424G0.35
UCECchr196417042Frame_Shift_DelnovelP376Qfs*520.49
UCECchr196418823Frame_Shift_DelnovelP220Qfs*200.11
UCECchr196416546Missense_MutationnovelR478W0.42
UCECchr196422373Missense_MutationnovelF105V0.03
UCECchr196420472Splice_SiteNAX142_splice0.5
UCECchr196416617Missense_MutationNAT454M0.58
UCECchr196415300Splice_Regionrs764013651A656A0.42
UCECchr196419205Splice_RegionnovelV201V0.29
UCSchr196417005Silentrs554880290D388D0.07
UCSchr196416493Silentrs769685889I495I0.36

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCADEL0.20590.11788
CHOLDEL0.08330.067545
LAMLDEL0.01050.24147
LIHCDEL0.18110.12467
PAADDEL0.13040.0060878
PCPGDEL00.13351
READDEL0.1030.23023
THCADEL0.0120.24038
THYMDEL0.02440.022012
UCECDEL0.23380.027215
UCSDEL0.64290.089783

Survival Analysis
CancerP-value Q-value
STAD0.0094

Kaplan-Meier Survival Analysis

MESO0.0074

Kaplan-Meier Survival Analysis

ACC0.0001

Kaplan-Meier Survival Analysis

HNSC0.045

Kaplan-Meier Survival Analysis

SKCM0.004

Kaplan-Meier Survival Analysis

PRAD0.023

Kaplan-Meier Survival Analysis

KIRP0.00033

Kaplan-Meier Survival Analysis

GBM0.036

Kaplan-Meier Survival Analysis

LIHC0.023

Kaplan-Meier Survival Analysis

UVM0.027

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000088247 (Gene tree)
Gene ID
8570
Gene Symbol
KHSRP
Alias
KSRP|FBP2|FUBP2
Full Name
KH-type splicing regulatory protein
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
11,708 bases
Position
chr19:6,413,104-6,424,811
Accession
6316
RBP type
canonical RBP
Summary
The KHSRP gene encodes a multifunctional RNA-binding protein implicated in a variety of cellular processes, including transcription, alternative pre-mRNA splicing, and mRNA localization (Min et al., 1997 [PubMed 9136930]; Gherzi et al., 2004 [PubMed 15175153]).[supplied by OMIM, Apr 2010]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000381216KH_1PF00013.291.7e-6414
ENSP00000381216KH_1PF00013.291.7e-6424
ENSP00000381216KH_1PF00013.291.7e-6434
ENSP00000381216KH_1PF00013.291.7e-6444
ENSP00000478033KH_1PF00013.291.7e-6414
ENSP00000478033KH_1PF00013.291.7e-6424
ENSP00000478033KH_1PF00013.291.7e-6434
ENSP00000478033KH_1PF00013.291.7e-6444
ENSP00000469830KH_1PF00013.294.7e-3612
ENSP00000469830KH_1PF00013.294.7e-3622
ENSP00000471262KH_1PF00013.291.9e-2812
ENSP00000471262KH_1PF00013.291.9e-2822
ENSP00000469431KH_1PF00013.291.5e-2612
ENSP00000469431KH_1PF00013.291.5e-2622
ENSP00000473254KH_1PF00013.291.4e-1511
ENSP00000381216KH_2PF07650.173e-1811
ENSP00000478033KH_2PF07650.173e-1811
ENSP00000469830KH_2PF07650.174.7e-1011
ENSP00000471262KH_2PF07650.177e-0911
ENSP00000471146DUF1897PF09005.102.2e-1312
ENSP00000471146DUF1897PF09005.102.2e-1322
ENSP00000381216DUF1897PF09005.102e-1212
ENSP00000381216DUF1897PF09005.102e-1222
ENSP00000472328DUF1897PF09005.101.6e-0911
ENSP00000472347DUF1897PF09005.102e-0911
ENSP00000469804DUF1897PF09005.106e-0911
ENSP00000473254DUF1897PF09005.105.1e-0811
ENSP00000478033DUF1897PF09005.103.2e-0611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
28847731KSRP suppresses cell invasion and metastasis through miR-23a-mediated EGR3 mRNA degradation in non-small cell lung cancer.Biochim Biophys Acta Gene Regul Mech2017 OctChien MHdoi: 10.1016/j.bbagrm.2017.08.005
21935887The role of KSRP in mRNA decay and microRNA precursor maturation.Wiley Interdiscip Rev RNA2010 Sep-OctGherzi Rdoi: 10.1002/wrna.2
24697202Control of pro-angiogenic cytokine mRNA half-life in cancer: the role of AU-rich elements and associated proteins.J Interferon Cytokine Res2014 AprGriseri Pdoi: 10.1089/jir.2013.0140.
27396342miRNA-Mediated KHSRP Silencing Rewires Distinct Post-transcriptional Programs during TGF-β-Induced Epithelial-to-Mesenchymal Transition.Cell Rep2016 Jul 26Puppo Mdoi: 10.1016/j.celrep.2016.06.055
16950790The polypyrimidine tract-binding protein (PTB) is involved in the post-transcriptional regulation of human inducible nitric oxide synthase expression.J Biol Chem2006 Oct 27Pautz A-
19015122A cytoplasmic variant of the KH-type splicing regulatory protein serves as a decay-promoting factor for phosphoglycerate kinase 2 mRNA in murine male germ cells.Nucleic Acids Res2008 DecXu Mdoi: 10.1093/nar/gkn800
26545813LEDGF/p75 interacts with mRNA splicing factors and targets HIV-1 integration to highly spliced genes.Genes Dev2015 Nov 1Singh PKdoi: 10.1101/gad.267609.115.
29254151KH-type splicing regulatory protein is involved in esophageal squamous cell carcinoma progression.Oncotarget2017 Sep 15Fujita Ydoi: 10.18632/oncotarget.20926
31313286Inhibition of KHSRP sensitizes colorectal cancer to 5-fluoruracil through miR-501-5p-mediated ERRFI1 mRNA degradation.J Cell Physiol2019 Jul 16Pan Rdoi: 10.1002/jcp.29076
25352548Resveratrol post-transcriptionally regulates pro-inflammatory gene expression via regulation of KSRP RNA binding activity.Nucleic Acids Res2014 Nov 10Bollmann Fdoi: 10.1093/nar/gku1033
9136930A new regulatory protein, KSRP, mediates exon inclusion through an intronic splicing enhancer.Genes Dev1997 Apr 15Min H-
15514971IL-1beta induces stabilization of IL-8 mRNA in malignant breast cancer cells via the 3' untranslated region: Involvement of divergent RNA-binding factors HuR, KSRP and TIAR.Int J Cancer2005 Mar 1Suswam EA-
15175153A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery.Mol Cell2004 Jun 4Gherzi R-
14657238Differentiation-induced colocalization of the KH-type splicing regulatory protein with polypyrimidine tract binding protein and the c-src pre-mRNA.Mol Biol Cell2004 FebHall MP-
19458619The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs.Nature2009 Jun 18Trabucchi Mdoi: 10.1038/nature08025
19423639LPS induces KH-type splicing regulatory protein-dependent processing of microRNA-155 precursors in macrophages.FASEB J2009 SepRuggiero Tdoi: 10.1096/fj.09-131342
17998247KH-type splicing regulatory protein interacts with survival motor neuron protein and is misregulated in spinal muscular atrophy.Hum Mol Genet2008 Feb 15Tadesse H-
22844247Let-7b/c enhance the stability of a tissue-specific mRNA during mammalian organogenesis as part of a feedback loop involving KSRP.PLoS Genet2012Repetto Edoi: 10.1371/journal.pgen.1002823
22847996KSRP: a checkpoint for inflammatory cytokine production in astrocytes.Glia2012 NovLi Xdoi: 10.1002/glia.22396
17177604The RNA-binding protein KSRP promotes decay of beta-catenin mRNA and is inactivated by PI3K-AKT signaling.PLoS Biol2006 DecGherzi R-
21982546RNA-binding proteins and gene regulation in myogenesis.Trends Pharmacol Sci2011 NovApponi LHdoi: 10.1016/j.tips.2011.06.004
21917750AU-rich RNA binding proteins in hematopoiesis and leukemogenesis.Blood2011 Nov 24Baou Mdoi: 10.1182/blood-2011-07-347237
21933836The X-chromosome-linked intellectual disability protein PQBP1 is a component of neuronal RNA granules and regulates the appearance of stress granules.Hum Mol Genet2011 Dec 15Kunde SAdoi: 10.1093/hmg/ddr430
21886180PI3K/AKT signaling determines a dynamic switch between distinct KSRP functions favoring skeletal myogenesis.Cell Death Differ2012 MarBriata Pdoi: 10.1038/cdd.2011.117
21690298Posttranscriptional control of type I interferon genes by KSRP in the innate immune response against viral infection.Mol Cell Biol2011 AugLin WJdoi: 10.1128/MCB.05073-11
20438856Regulation of the expression of inducible nitric oxide synthase.Nitric Oxide2010 Sep 15Pautz Adoi: 10.1016/j.niox.2010.04.007
20385598Orientation of the central domains of KSRP and its implications for the interaction with the RNA targets.Nucleic Acids Res2010 AugDiaz-Moreno Idoi: 10.1093/nar/gkq216
28362162Hypoxia and Hypoglycemia synergistically regulate mRNA stability.RNA Biol2017 Jul 3Carraway KRdoi: 10.1080/15476286.2017.1311456
25189382microRNA and human inducible nitric oxide synthase.Vitam Horm2014Guo Zdoi: 10.1016/B978-0-12-800254-4.00002-7.
25027559KHSRP participates in manganese-induced neurotoxicity in rat striatum and PC12 cells.J Mol Neurosci2015 FebShi Sdoi: 10.1007/s12031-014-0367-7
24732799KSRP and MicroRNA 145 are negative regulators of lipolysis in white adipose tissue.Mol Cell Biol2014 JunLin YYdoi: 10.1128/MCB.00042-14
24368152Spatiotemporal expression of KHSRP modulates Schwann cells and neuronal differentiation after sciatic nerve injury.Int J Biochem Cell Biol2014 MarZhu Xdoi: 10.1016/j.biocel.2013.12.008
28088441Resveratrol limits epithelial to mesenchymal transition through modulation of KHSRP/hnRNPA1-dependent alternative splicing in mammary gland cells.Biochim Biophys Acta Gene Regul Mech2017 MarMoshiri Adoi: 10.1016/j.bbagrm.2017.01.001
23791529DNA-damage-induced nuclear export of precursor microRNAs is regulated by the ATM-AKT pathway.Cell Rep2013 Jun 27Wan Gdoi: 10.1016/j.celrep.2013.05.038
24722250KSRP ablation enhances brown fat gene program in white adipose tissue through reduced miR-150 expression.Diabetes2014 SepChou CFdoi: 10.2337/db13-1901
25385579H19 long noncoding RNA controls the mRNA decay promoting function of KSRP.Proc Natl Acad Sci U S A2014 Nov 25Giovarelli Mdoi: 10.1073/pnas.1415098111
27478153The miRNA biogenesis factors, p72/DDX17 and KHSRP regulate the protein level of Ago2 in human cells.Biochim Biophys Acta2016 OctConnerty Pdoi: 10.1016/j.bbagrm.2016.07.013
25992900Roles of Prolyl Isomerases in RNA-Mediated Gene Expression.Biomolecules2015 May 18Thapar Rdoi: 10.3390/biom5020974.
29222050Effects of the RNA-binding protein, KSRP, on innate immune response against Helicobacter pylori infection in mice.Biochem Biophys Res Commun2018 Jan 8Li Ndoi: 10.1016/j.bbrc.2017.12.016
29728998KH-type splicing regulatory protein is regulated by nuclear factor-kB signaling to mediate innate immunity in Caco-2 cells infected by Salmonella enteritidis.Folia Microbiol (Praha)2018 NovNie Ydoi: 10.1007/s12223-018-0606-3
30578289The KH-type splicing regulatory protein (KSRP) regulates type III interferon expression post-transcriptionally.Biochem J2019 Jan 31Schmidtke Ldoi: 10.1042/BCJ20180522.
30696738Genome-Wide Profiling of Cervical RNA-Binding Proteins Identifies Human Papillomavirus Regulation of RNASEH2A Expression by Viral E7 and E2F1.MBio2019 Jan 29Xu Jdoi: 10.1128/mBio.02687-18.
11003644Cooperative assembly of an hnRNP complex induced by a tissue-specific homolog of polypyrimidine tract binding protein.Mol Cell Biol2000 OctMarkovtsov V-
17531340Proteomic analysis of gene expression following hypoxia and reoxygenation reveals proteins involved in the recovery from endoplasmic reticulum and oxidative stress.Radiother Oncol2007 JunMagagnin MG-
19010963Far upstream element binding protein 2 interacts with enterovirus 71 internal ribosomal entry site and negatively regulates viral translation.Nucleic Acids Res2009 JanLin JYdoi: 10.1093/nar/gkn901
26708421Diverse roles of the nucleic acid-binding protein KHSRP in cell differentiation and disease.Wiley Interdiscip Rev RNA2016 Mar-AprBriata Pdoi: 10.1002/wrna.1327
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000595258KHSRP-206672-ENSP00000469431116 (aa)-M0QXW7
ENST00000600480KHSRP-212851-ENSP00000471146176 (aa)-M0R0C6
ENST00000398148KHSRP-2012993XM_005259668ENSP00000381216711 (aa)XP_005259725Q92945
ENST00000594745KHSRP-203379-ENSP00000469804114 (aa)-M0QYG1
ENST00000599395KHSRP-210837-ENSP00000471262279 (aa)-M0R0I5
ENST00000595223KHSRP-205956-ENSP00000473254269 (aa)-M0R3J3
ENST00000595112KHSRP-204745--- (aa)--
ENST00000597704KHSRP-209706--- (aa)--
ENST00000599642KHSRP-211428--- (aa)--
ENST00000595548KHSRP-207801-ENSP00000469830169 (aa)-M0QYH3
ENST00000594496KHSRP-202999-ENSP00000472347143 (aa)-M0R263
ENST00000619396KHSRP-2132226-ENSP00000478033711 (aa)-A0A087WTP3
ENST00000597656KHSRP-208328-ENSP0000047232879 (aa)-M0R251
Gene Model
Click here to download ENSG00000088247's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000088247's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000088247KHSRP9935.938ENSG00000183570PCBP39630.189
ENSG00000088247KHSRP10073.276ENSG00000162613FUBP19360.781
ENSG00000088247KHSRP9934.247ENSG00000197111PCBP27433.333
ENSG00000088247KHSRP9935.616ENSG00000090097PCBP410030.303
ENSG00000088247KHSRP9631.507ENSG00000139910NOVA16441.667
ENSG00000088247KHSRP6330.137ENSG00000165119HNRNPK6630.303
ENSG00000088247KHSRP9962.275ENSG00000107164FUBP39545.274
ENSG00000088247KHSRP9531.250ENSG00000136231IGF2BP35231.250
ENSG00000088247KHSRP9934.722ENSG00000169564PCBP16434.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000088247KHSRP10077.515ENSAPOG00000009524khsrp9671.478Acanthochromis_polyacanthus
ENSG00000088247KHSRP9982.738ENSAPOG00000012989KHSRP9373.552Acanthochromis_polyacanthus
ENSG00000088247KHSRP100100.000ENSAMEG00000006978KHSRP9194.935Ailuropoda_melanoleuca
ENSG00000088247KHSRP10072.781ENSACIG00000009298khsrp9467.633Amphilophus_citrinellus
ENSG00000088247KHSRP9983.333ENSAOCG00000010189KHSRP9373.865Amphiprion_ocellaris
ENSG00000088247KHSRP10078.107ENSAOCG00000010049khsrp9568.536Amphiprion_ocellaris
ENSG00000088247KHSRP10078.107ENSAPEG00000013411khsrp9568.536Amphiprion_percula
ENSG00000088247KHSRP9983.333ENSAPEG00000008575KHSRP9373.865Amphiprion_percula
ENSG00000088247KHSRP10077.515ENSATEG00000024744KHSRP9166.928Anabas_testudineus
ENSG00000088247KHSRP10075.740ENSATEG00000019332khsrp9567.500Anabas_testudineus
ENSG00000088247KHSRP10097.041ENSACAG00000015398KHSRP8992.160Anolis_carolinensis
ENSG00000088247KHSRP100100.000ENSANAG00000027617KHSRP9694.595Aotus_nancymaae
ENSG00000088247KHSRP10073.276ENSANAG00000004931-9361.153Aotus_nancymaae
ENSG00000088247KHSRP9979.882ENSACLG00000001424KHSRP8771.542Astatotilapia_calliptera
ENSG00000088247KHSRP10072.781ENSACLG00000020487khsrp9564.961Astatotilapia_calliptera
ENSG00000088247KHSRP10081.897ENSAMXG00000036582khsrp9371.270Astyanax_mexicanus
ENSG00000088247KHSRP100100.000ENSBTAG00000021018KHSRP10099.020Bos_taurus
ENSG00000088247KHSRP10073.276ENSBTAG00000008926FUBP19362.928Bos_taurus
ENSG00000088247KHSRP100100.000ENSCJAG00000016627KHSRP100100.000Callithrix_jacchus
ENSG00000088247KHSRP100100.000ENSCAFG00000018667KHSRP9499.470Canis_familiaris
ENSG00000088247KHSRP100100.000ENSCAFG00020019133KHSRP10094.890Canis_lupus_dingo
ENSG00000088247KHSRP10073.276ENSCAFG00020015251-9362.986Canis_lupus_dingo
ENSG00000088247KHSRP100100.000ENSCHIG00000027053KHSRP10099.020Capra_hircus
ENSG00000088247KHSRP10073.276ENSCHIG00000013418-9362.830Capra_hircus
ENSG00000088247KHSRP100100.000ENSTSYG00000011552KHSRP8899.841Carlito_syrichta
ENSG00000088247KHSRP100100.000ENSCAPG00000005534KHSRP8490.020Cavia_aperea
ENSG00000088247KHSRP100100.000ENSCPOG00000005140KHSRP8389.100Cavia_porcellus
ENSG00000088247KHSRP10099.408ENSCCAG00000025297KHSRP10095.910Cebus_capucinus
ENSG00000088247KHSRP100100.000ENSCATG00000036458KHSRP9299.828Cercocebus_atys
ENSG00000088247KHSRP100100.000ENSCLAG00000007309KHSRP8390.939Chinchilla_lanigera
ENSG00000088247KHSRP100100.000ENSCSAG00000009626KHSRP95100.000Chlorocebus_sabaeus
ENSG00000088247KHSRP10072.414ENSCPBG00000016987-9361.120Chrysemys_picta_bellii
ENSG00000088247KHSRP10098.225ENSCPBG00000005286KHSRP8993.920Chrysemys_picta_bellii
ENSG00000088247KHSRP10073.276ENSCANG00000034534-9361.305Colobus_angolensis_palliatus
ENSG00000088247KHSRP100100.000ENSCANG00000015665KHSRP10094.006Colobus_angolensis_palliatus
ENSG00000088247KHSRP100100.000ENSCGRG00001011031Khsrp9998.594Cricetulus_griseus_chok1gshd
ENSG00000088247KHSRP100100.000ENSCGRG00000015331Khsrp8494.301Cricetulus_griseus_crigri
ENSG00000088247KHSRP10073.964ENSCSEG00000011429khsrp9563.054Cynoglossus_semilaevis
ENSG00000088247KHSRP10073.837ENSCVAG00000001873khsrp9565.367Cyprinodon_variegatus
ENSG00000088247KHSRP10082.759ENSDARG00000026489khsrp9468.495Danio_rerio
ENSG00000088247KHSRP100100.000ENSDNOG00000046507KHSRP8198.856Dasypus_novemcinctus
ENSG00000088247KHSRP10073.276ENSDNOG00000013200-9462.481Dasypus_novemcinctus
ENSG00000088247KHSRP100100.000ENSDORG00000002447Khsrp8684.586Dipodomys_ordii
ENSG00000088247KHSRP9998.611ENSETEG00000004793KHSRP9488.387Echinops_telfairi
ENSG00000088247KHSRP10073.276ENSEASG00005016990-9362.830Equus_asinus_asinus
ENSG00000088247KHSRP100100.000ENSEASG00005023114KHSRP10099.160Equus_asinus_asinus
ENSG00000088247KHSRP100100.000ENSECAG00000018305KHSRP10099.160Equus_caballus
ENSG00000088247KHSRP10073.276ENSECAG00000010867FUBP19362.986Equus_caballus
ENSG00000088247KHSRP10082.840ENSELUG00000016310khsrp9568.950Esox_lucius
ENSG00000088247KHSRP9983.478ENSELUG00000008445-9365.749Esox_lucius
ENSG00000088247KHSRP10073.276ENSFCAG00000010330-9363.084Felis_catus
ENSG00000088247KHSRP100100.000ENSFCAG00000003731KHSRP10099.160Felis_catus
ENSG00000088247KHSRP9996.610ENSFDAG00000010889KHSRP9867.407Fukomys_damarensis
ENSG00000088247KHSRP10072.189ENSFHEG00000009577khsrp9563.551Fundulus_heteroclitus
ENSG00000088247KHSRP10076.923ENSGMOG00000002166khsrp8769.371Gadus_morhua
ENSG00000088247KHSRP10076.923ENSGAFG00000010469khsrp9566.195Gambusia_affinis
ENSG00000088247KHSRP10075.148ENSGACG00000018990khsrp8666.335Gasterosteus_aculeatus
ENSG00000088247KHSRP9979.167ENSGACG00000012422KHSRP9371.315Gasterosteus_aculeatus
ENSG00000088247KHSRP10098.225ENSGAGG00000023246KHSRP9293.920Gopherus_agassizii
ENSG00000088247KHSRP10072.414ENSGAGG00000019219-9361.742Gopherus_agassizii
ENSG00000088247KHSRP10073.276ENSGGOG00000027554FUBP19361.103Gorilla_gorilla
ENSG00000088247KHSRP100100.000ENSGGOG00000007028KHSRP97100.000Gorilla_gorilla
ENSG00000088247KHSRP10073.373ENSHBUG00000018543khsrp9565.116Haplochromis_burtoni
ENSG00000088247KHSRP9979.882ENSHBUG00000014760KHSRP9371.607Haplochromis_burtoni
ENSG00000088247KHSRP10098.876ENSHGLG00000013239KHSRP10098.876Heterocephalus_glaber_female
ENSG00000088247KHSRP10098.235ENSHGLG00100000480KHSRP7867.370Heterocephalus_glaber_male
ENSG00000088247KHSRP10072.781ENSHCOG00000020488khsrp9463.994Hippocampus_comes
ENSG00000088247KHSRP10081.897ENSIPUG00000008034khsrp9373.889Ictalurus_punctatus
ENSG00000088247KHSRP100100.000ENSSTOG00000002371KHSRP9499.362Ictidomys_tridecemlineatus
ENSG00000088247KHSRP100100.000ENSJJAG00000006370Khsrp9597.324Jaculus_jaculus
ENSG00000088247KHSRP10074.556ENSKMAG00000018579khsrp9565.625Kryptolebias_marmoratus
ENSG00000088247KHSRP10078.107ENSLBEG00000005191khsrp9467.742Labrus_bergylta
ENSG00000088247KHSRP10068.047ENSLACG00000002072KHSRP9076.282Latimeria_chalumnae
ENSG00000088247KHSRP10074.138ENSLACG00000012547-9561.173Latimeria_chalumnae
ENSG00000088247KHSRP9986.957ENSLOCG00000006229khsrp9273.744Lepisosteus_oculatus
ENSG00000088247KHSRP9999.429ENSLAFG00000002426KHSRP10093.590Loxodonta_africana
ENSG00000088247KHSRP100100.000ENSMFAG00000000292KHSRP10091.139Macaca_fascicularis
ENSG00000088247KHSRP100100.000ENSMMUG00000005597KHSRP100100.000Macaca_mulatta
ENSG00000088247KHSRP100100.000ENSMNEG00000036982KHSRP10093.046Macaca_nemestrina
ENSG00000088247KHSRP100100.000ENSMLEG00000030501KHSRP100100.000Mandrillus_leucophaeus
ENSG00000088247KHSRP10073.276ENSMLEG00000032973-9759.649Mandrillus_leucophaeus
ENSG00000088247KHSRP10076.331ENSMAMG00000011746khsrp9268.852Mastacembelus_armatus
ENSG00000088247KHSRP9979.167ENSMAMG00000023639KHSRP9172.337Mastacembelus_armatus
ENSG00000088247KHSRP9979.167ENSMZEG00005022974-7872.596Maylandia_zebra
ENSG00000088247KHSRP9979.882ENSMZEG00005011227KHSRP9371.607Maylandia_zebra
ENSG00000088247KHSRP100100.000ENSMAUG00000018966Khsrp8794.719Mesocricetus_auratus
ENSG00000088247KHSRP10073.276ENSMICG00000014463-9161.601Microcebus_murinus
ENSG00000088247KHSRP10099.408ENSMICG00000007863KHSRP9896.733Microcebus_murinus
ENSG00000088247KHSRP100100.000ENSMOCG00000018305Khsrp8197.339Microtus_ochrogaster
ENSG00000088247KHSRP10068.966ENSMMOG00000021381-9361.244Mola_mola
ENSG00000088247KHSRP9969.620ENSMMOG00000005097-8366.901Mola_mola
ENSG00000088247KHSRP10098.276ENSMODG00000001952KHSRP9295.058Monodelphis_domestica
ENSG00000088247KHSRP10074.556ENSMALG00000006104khsrp9459.429Monopterus_albus
ENSG00000088247KHSRP9977.976ENSMALG00000004958KHSRP8766.884Monopterus_albus
ENSG00000088247KHSRP99100.000MGP_CAROLIEiJ_G0021800Khsrp8498.469Mus_caroli
ENSG00000088247KHSRP100100.000ENSMUSG00000007670Khsrp9998.312Mus_musculus
ENSG00000088247KHSRP100100.000MGP_PahariEiJ_G0020789Khsrp9598.172Mus_pahari
ENSG00000088247KHSRP100100.000MGP_SPRETEiJ_G0022711Khsrp9598.312Mus_spretus
ENSG00000088247KHSRP100100.000ENSMPUG00000006615KHSRP9994.143Mustela_putorius_furo
ENSG00000088247KHSRP10073.276ENSMPUG00000010799-9063.084Mustela_putorius_furo
ENSG00000088247KHSRP10099.408ENSMLUG00000015543KHSRP9499.522Myotis_lucifugus
ENSG00000088247KHSRP100100.000ENSNGAG00000023093Khsrp9596.765Nannospalax_galili
ENSG00000088247KHSRP9979.882ENSNBRG00000005876KHSRP9172.425Neolamprologus_brichardi
ENSG00000088247KHSRP10073.373ENSNBRG00000023797khsrp9366.878Neolamprologus_brichardi
ENSG00000088247KHSRP99100.000ENSNLEG00000015923KHSRP9992.901Nomascus_leucogenys
ENSG00000088247KHSRP10099.408ENSMEUG00000016601KHSRP10089.153Notamacropus_eugenii
ENSG00000088247KHSRP10098.817ENSOPRG00000010594-8590.982Ochotona_princeps
ENSG00000088247KHSRP10084.564ENSODEG00000015021KHSRP8678.571Octodon_degus
ENSG00000088247KHSRP9979.290ENSONIG00000002163KHSRP9371.763Oreochromis_niloticus
ENSG00000088247KHSRP10073.373ENSONIG00000017713khsrp9566.407Oreochromis_niloticus
ENSG00000088247KHSRP9991.250ENSOANG00000000261KHSRP9290.411Ornithorhynchus_anatinus
ENSG00000088247KHSRP10099.408ENSOCUG00000026747-9497.484Oryctolagus_cuniculus
ENSG00000088247KHSRP9964.671ENSOCUG00000002225-9460.714Oryctolagus_cuniculus
ENSG00000088247KHSRP10072.189ENSORLG00000011882khsrp9362.326Oryzias_latipes
ENSG00000088247KHSRP10067.456ENSORLG00020005284khsrp9362.205Oryzias_latipes_hni
ENSG00000088247KHSRP10072.781ENSORLG00015003791khsrp9563.622Oryzias_latipes_hsok
ENSG00000088247KHSRP10071.598ENSOMEG00000013233khsrp9562.835Oryzias_melastigma
ENSG00000088247KHSRP100100.000ENSOGAG00000008073KHSRP9999.437Otolemur_garnettii
ENSG00000088247KHSRP100100.000ENSOARG00000005881KHSRP9799.174Ovis_aries
ENSG00000088247KHSRP100100.000ENSPPAG00000036395-9499.839Pan_paniscus
ENSG00000088247KHSRP100100.000ENSPPAG00000036398-10090.127Pan_paniscus
ENSG00000088247KHSRP10073.276ENSPPAG00000038243-9361.002Pan_paniscus
ENSG00000088247KHSRP100100.000ENSPPRG00000008001KHSRP8191.017Panthera_pardus
ENSG00000088247KHSRP100100.000ENSPTRG00000010364KHSRP9794.294Pan_troglodytes
ENSG00000088247KHSRP10073.276ENSPTRG00000000888FUBP19360.850Pan_troglodytes
ENSG00000088247KHSRP10073.276ENSPANG00000004797-9361.854Papio_anubis
ENSG00000088247KHSRP100100.000ENSPANG00000000103KHSRP100100.000Papio_anubis
ENSG00000088247KHSRP10077.515ENSPKIG00000003200khsrp8767.841Paramormyrops_kingsleyae
ENSG00000088247KHSRP9983.478ENSPKIG00000005077KHSRP9272.565Paramormyrops_kingsleyae
ENSG00000088247KHSRP9866.463ENSPKIG00000009065-9457.277Paramormyrops_kingsleyae
ENSG00000088247KHSRP10097.633ENSPSIG00000008244KHSRP6993.933Pelodiscus_sinensis
ENSG00000088247KHSRP9863.871ENSPMGG00000016443khsrp9761.189Periophthalmus_magnuspinnatus
ENSG00000088247KHSRP100100.000ENSPEMG00000022853Khsrp8794.554Peromyscus_maniculatus_bairdii
ENSG00000088247KHSRP10099.408ENSPCIG00000025516KHSRP9996.095Phascolarctos_cinereus
ENSG00000088247KHSRP10073.276ENSPCIG00000022984-9362.928Phascolarctos_cinereus
ENSG00000088247KHSRP10076.923ENSPFOG00000004577khsrp9566.457Poecilia_formosa
ENSG00000088247KHSRP10076.923ENSPLAG00000010763khsrp9566.457Poecilia_latipinna
ENSG00000088247KHSRP10076.923ENSPMEG00000014049khsrp9566.457Poecilia_mexicana
ENSG00000088247KHSRP10076.923ENSPREG00000000419khsrp9566.038Poecilia_reticulata
ENSG00000088247KHSRP10086.391ENSPPYG00000019172-9576.771Pongo_abelii
ENSG00000088247KHSRP100100.000ENSPPYG00000009454KHSRP9898.408Pongo_abelii
ENSG00000088247KHSRP99100.000ENSPCAG00000000246KHSRP10089.027Procavia_capensis
ENSG00000088247KHSRP100100.000ENSPCOG00000027506KHSRP10091.421Propithecus_coquereli
ENSG00000088247KHSRP100100.000ENSPVAG00000007251KHSRP8794.364Pteropus_vampyrus
ENSG00000088247KHSRP10072.781ENSPNYG00000001374khsrp9564.907Pundamilia_nyererei
ENSG00000088247KHSRP9979.882ENSPNYG00000014008KHSRP8771.732Pundamilia_nyererei
ENSG00000088247KHSRP10081.065ENSPNAG00000012026khsrp9371.406Pygocentrus_nattereri
ENSG00000088247KHSRP100100.000ENSRNOG00000047628Khsrp9998.453Rattus_norvegicus
ENSG00000088247KHSRP97100.000ENSRBIG00000041605KHSRP9686.545Rhinopithecus_bieti
ENSG00000088247KHSRP100100.000ENSRROG00000031782KHSRP92100.000Rhinopithecus_roxellana
ENSG00000088247KHSRP100100.000ENSSBOG00000034871KHSRP100100.000Saimiri_boliviensis_boliviensis
ENSG00000088247KHSRP10099.408ENSSHAG00000011383KHSRP9498.845Sarcophilus_harrisii
ENSG00000088247KHSRP9983.478ENSSFOG00015010767KHSRP9273.071Scleropages_formosus
ENSG00000088247KHSRP10079.290ENSSFOG00015018719khsrp9368.770Scleropages_formosus
ENSG00000088247KHSRP9981.928ENSSMAG00000012166KHSRP9065.329Scophthalmus_maximus
ENSG00000088247KHSRP10074.556ENSSMAG00000004167khsrp9560.731Scophthalmus_maximus
ENSG00000088247KHSRP9981.739ENSSDUG00000002110KHSRP9372.770Seriola_dumerili
ENSG00000088247KHSRP10078.107ENSSDUG00000002390khsrp9468.038Seriola_dumerili
ENSG00000088247KHSRP9981.739ENSSLDG00000025625KHSRP9372.770Seriola_lalandi_dorsalis
ENSG00000088247KHSRP10070.414ENSSLDG00000012993khsrp9464.670Seriola_lalandi_dorsalis
ENSG00000088247KHSRP10097.633ENSSPUG00000016462KHSRP9092.810Sphenodon_punctatus
ENSG00000088247KHSRP10078.107ENSSPAG00000008349khsrp9567.907Stegastes_partitus
ENSG00000088247KHSRP9980.870ENSSPAG00000008244KHSRP8373.132Stegastes_partitus
ENSG00000088247KHSRP10073.276ENSSSCG00000003771-9660.140Sus_scrofa
ENSG00000088247KHSRP100100.000ENSSSCG00000013538KHSRP10099.160Sus_scrofa
ENSG00000088247KHSRP10072.781ENSTNIG00000014067khsrp9462.439Tetraodon_nigroviridis
ENSG00000088247KHSRP100100.000ENSTTRG00000010390KHSRP9596.429Tursiops_truncatus
ENSG00000088247KHSRP9999.429ENSUAMG00000023100KHSRP8498.741Ursus_americanus
ENSG00000088247KHSRP10073.276ENSUAMG00000004961-9662.413Ursus_americanus
ENSG00000088247KHSRP9999.429ENSUMAG00000011144KHSRP8591.433Ursus_maritimus
ENSG00000088247KHSRP10073.276ENSUMAG00000006022-9360.994Ursus_maritimus
ENSG00000088247KHSRP95100.000ENSVPAG00000010837-10089.972Vicugna_pacos
ENSG00000088247KHSRP10073.276ENSVVUG00000030003-9361.086Vulpes_vulpes
ENSG00000088247KHSRP100100.000ENSVVUG00000026737KHSRP9499.470Vulpes_vulpes
ENSG00000088247KHSRP9991.176ENSXETG00000021862khsrp9769.350Xenopus_tropicalis
ENSG00000088247KHSRP9971.257ENSXETG00000013137fubp19562.208Xenopus_tropicalis
ENSG00000088247KHSRP10075.740ENSXCOG00000014443khsrp9165.798Xiphophorus_couchianus
ENSG00000088247KHSRP10075.740ENSXMAG00000012876khsrp9566.299Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000178exosome (RNase complex)16126846.NASComponent
GO:0000375RNA splicing, via transesterification reactions10911989.TASProcess
GO:0003677DNA binding-IEAFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding16126846.19458619.IPIFunction
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005829cytosol-TASComponent
GO:0006355regulation of transcription, DNA-templated-IEAProcess
GO:0006397mRNA processing-IEAProcess
GO:0006402mRNA catabolic process-IEAProcess
GO:0008380RNA splicing10911989.TASProcess
GO:0010494cytoplasmic stress granule-IEAComponent
GO:0010586miRNA metabolic process27478153.IMPProcess
GO:0010989negative regulation of low-density lipoprotein particle clearance26523989.IGIProcess
GO:0016020membrane19946888.HDAComponent
GO:0035925mRNA 3'-UTR AU-rich region binding16126846.IDAFunction
GO:0043488regulation of mRNA stability16126846.IDAProcess
GO:0043488regulation of mRNA stability-TASProcess
GO:0045019negative regulation of nitric oxide biosynthetic process16126846.IDAProcess
GO:0051028mRNA transport-IEAProcess
GO:0061014positive regulation of mRNA catabolic process16126846.IDAProcess
GO:00611583'-UTR-mediated mRNA destabilization16126846.IDAProcess
GO:0071345cellular response to cytokine stimulus16126846.IMPProcess
GO:2000628regulation of miRNA metabolic process-IEAProcess
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