EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
26209226GTSE1 expression represses apoptotic signaling and confers cisplatin resistance in gastric cancer cells.BMC Cancer2015 Jul 25Subhash VVdoi: 10.1186/s12885-015-1550-0.
30414902Overexpression of G2 and S phase-expressed-1 contributes to cell proliferation, migration, and invasion via regulating p53/FoxM1/CCNB1 pathway and predicts poor prognosis in bladder cancer.Int J Biol Macromol2019 Feb 15Liu Adoi: 10.1016/j.ijbiomac.2018.11.032
22292647Up-regulation of GTSE1 lacks a relationship with clinical data in lung cancer.Asian Pac J Cancer Prev2011Tian T-

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2246312152Missense_MutationnovelE258D0.25
BLCAchr2246326496SilentnovelL522L0.56
BLCAchr2246329498SilentNAL689L0.33
BLCAchr2246308701SilentnovelL174L0.27
BLCAchr2246329450Silentrs61737807C673C0.17
BLCAchr2246308495Missense_MutationNAA105V0.17
BLCAchr2246297472SilentNAK24K0.23
BLCAchr2246329236Intronnovel0.21
BLCAchr2246326652Missense_MutationnovelM574I0.39
BLCAchr2246326635Missense_Mutationrs528775411R569C0.24
BLCAchr2246326549Frame_Shift_InsnovelL541Pfs*270.17
BLCAchr2246329251Intronnovel0.35
BLCAchr2246316346Missense_MutationnovelL456I0.07
BRCAchr2246308419Missense_MutationnovelP80S0.15
BRCAchr2246308441Missense_Mutationrs535759667P87R0.4
BRCAchr22463306973'UTRnovel0.12
BRCAchr2246316202Missense_MutationNAE408Q0.29
BRCAchr2246316329Missense_MutationNAR450K0.29
BRCAchr2246323253Missense_MutationNAS499L0.16
BRCAchr2246316181Missense_MutationNAD401N0.68
BRCAchr2246329071Intronnovel0.14
BRCAchr2246326527Missense_MutationNAP533T0.41
BRCAchr2246316338Missense_MutationNAD453V0.31
BRCAchr2246308403Frame_Shift_DelNAV75Ffs*690.81
BRCAchr2246308672Missense_MutationNAE164V0.13
CESCchr2246316341Missense_MutationnovelS454F0.09
CESCchr2246313957Missense_Mutationrs765217704S332L0.11
CESCchr2246308692Missense_MutationNAS171G0.23
CESCchr2246326579Missense_MutationNAP550R0.25
COADchr2246328905Intronnovel0.36
COADchr2246297418SilentNAG6G0.26
COADchr2246308616Frame_Shift_InsNAL147Qfs*40.45
COADchr2246329393Silentrs756426814A654A0.42
COADchr2246328718SilentnovelK585K0.21
COADchr2246329541Missense_MutationNAA704T0.29
COADchr2246308403Silentrs147042849P74P0.37
COADchr2246326872Intronnovel0.25
COADchr2246313897Missense_MutationnovelL312P0.21
COADchr2246308184Silentrs149744214F38F0.29
COADchr2246308901SilentNAA240A0.17
COADchr2246308331SilentnovelD50D0.25
ESCAchr22463306203'UTRnovel0.52
ESCAchr2246312204Missense_Mutationrs766749646R276W0.06
ESCAchr2246316070Missense_MutationnovelS364P0.23
ESCAchr2246329227Intronnovel0.62
GBMchr2246308936Missense_Mutationrs147669373A252V0.41
GBMchr2246329446Missense_MutationNAF672S0.46
GBMchr2246330103Frame_Shift_DelnovelV732Gfs*210.22
GBMchr2246308940Missense_MutationnovelE253D0.77
GBMchr2246312233Silentrs749506319P285P0.47
GBMchr2246328754SilentnovelR597R0.09
HNSCchr2246308914Missense_Mutationrs748370009G245R0.2
HNSCchr2246308858Missense_Mutationrs767426101A226V0.23
HNSCchr2246326521Missense_MutationnovelP531S0.34
HNSCchr2246329450Silentrs61737807C673C0.25
HNSCchr2246308451Nonsense_MutationnovelW90*0.08
HNSCchr2246313916Missense_MutationnovelK318N0.38
HNSCchr2246308773Missense_MutationnovelR198S0.34
HNSCchr2246326471Missense_MutationnovelS514C0.33
HNSCchr2246316190Missense_MutationnovelE404Q0.09
HNSCchr2246326608Missense_MutationnovelP560S0.19
KIRCchr2246329375Frame_Shift_DelnovelK649Nfs*340.25
KIRCchr2246312277Missense_MutationNAG300V0.2
KIRPchr2246308434Missense_MutationnovelE85K0.58
KIRPchr2246328824Missense_MutationNAK621Q0.18
LAMLchr2246308844SilentnovelA221A0.08
LGGchr2246308329Missense_MutationnovelD50Y0.08
LGGchr2246308620Missense_MutationnovelL147I0.15
LGGchr2246316407Missense_Mutationrs563396011S476Y0.41
LIHCchr2246308629Frame_Shift_InsnovelS157Rfs*30.04
LIHCchr2246323251SilentNAT498T0.41
LUADchr2246329312Intronnovel0.32
LUADchr2246308892SilentnovelL237L0.17
LUADchr2246328835SilentNAA624A0.12
LUADchr2246312182SilentnovelI268I0.2
LUADchr2246308936Missense_MutationnovelA252E0.1
LUADchr2246316304Missense_MutationNAQ442E0.23
LUADchr2246326695Intronnovel0.26
LUADchr2246329417Missense_MutationnovelQ662H0.27
LUADchr2246313889Splice_SitenovelX310_splice0.27
LUADchr22463301783'UTRnovel0.6
LUSCchr2246308770Missense_MutationnovelA197S0.45
LUSCchr2246308569Missense_Mutationrs765658379R130W0.21
LUSCchr2246308404Missense_MutationNAV75I0.52
LUSCchr2246328965Intronnovel0.24
LUSCchr22463301443'UTRnovel0.15
LUSCchr2246326553SilentnovelL541L0.26
LUSCchr22463301853'UTRnovel0.14
LUSCchr2246312213Missense_MutationNAL279F0.33
LUSCchr2246329482Missense_MutationNAS684F0.52
LUSCchr2246326465Missense_Mutationrs144394568R512H0.27
OVchr2246313920Missense_MutationNAP320S0.23
PAADchr2246308494Missense_MutationnovelA105S0.22
PAADchr2246316246Missense_MutationnovelQ422H0.15
PAADchr2246329284Intronnovel0.18
PCPGchr2246308507Missense_MutationnovelA109V0.11
PRADchr2246329532Frame_Shift_DelnovelN702Mfs*130.32
READchr2246326717Intronnovel0.14
READchr2246316407Missense_Mutationrs563396011S476Y0.33
READchr2246326585Missense_MutationNAA552V0.35
READchr2246326515Frame_Shift_DelnovelA529Pfs*140.46
SARCchr2246308476Missense_Mutationrs200240747V99M0.4
SKCMchr2246308473Missense_MutationNAF98L0.29
SKCMchr2246329200Intronnovel0.5
SKCMchr2246328761Missense_MutationNAP600S0.53
SKCMchr2246326692Intronnovel0.42
SKCMchr2246326614Missense_Mutationrs201142261R562W0.14
SKCMchr2246308660Missense_Mutationrs747868772S160F0.4
SKCMchr2246329299Intronnovel0.33
SKCMchr22463301433'UTRnovel0.49
SKCMchr2246297426Missense_MutationnovelE9G0.32
SKCMchr2246308347Missense_Mutationrs141526579G56R0.3
SKCMchr2246308348Missense_MutationnovelG56E0.3
SKCMchr2246329221Intronnovel0.12
SKCMchr2246308475Silentrs200946263F98F0.26
SKCMchr2246316113Missense_MutationNAP378L0.44
SKCMchr2246312199Missense_MutationNAS274F0.54
SKCMchr2246329001Intronnovel0.23
SKCMchr2246326645Missense_MutationnovelS572F0.27
SKCMchr2246323201Missense_MutationnovelD482N0.31
SKCMchr2246329393Silentrs756426814A654A0.31
SKCMchr2246308695Missense_MutationnovelP172S0.11
SKCMchr2246308696Missense_MutationnovelP172L0.11
SKCMchr2246329255Intronnovel0.3
SKCMchr2246329554Missense_Mutationrs748997173P708L0.16
SKCMchr2246316377Missense_MutationNAP466L0.37
SKCMchr2246312298Missense_MutationNAP307L0.42
SKCMchr2246312290SilentNAI304I0.15
SKCMchr2246328726Missense_Mutationrs750967626S588F0.25
STADchr2246329360Splice_RegionnovelA643A0.26
STADchr2246312251Silentrs150217285P291P0.48
STADchr2246316318Silentrs757579901T446T0.07
STADchr2246323220Missense_MutationNAL488R0.11
STADchr2246329441SilentNAI670I0.17
STADchr22463302573'UTRnovel0.6
STADchr2246328761Missense_MutationNAP600S0.32
STADchr2246308936Missense_MutationnovelA252G0.71
STADchr2246308568SilentNAP129P0.16
STADchr2246316334Nonsense_Mutationrs780615307R452*0.06
UCECchr2246308421Silentrs370968604P80P0.35
UCECchr2246308204Nonsense_MutationNAS45*0.39
UCECchr2246329216Intronnovel0.38
UCECchr2246312232Missense_Mutationrs778042976P285L0.43
UCECchr2246308931SilentnovelG250G0.44
UCECchr2246329503Missense_MutationnovelD691G0.48
UCECchr2246326450Missense_MutationNAS507I0.3
UCECchr2246313973Silentrs143072372S337S0.33
UCECchr2246328905Intronnovel0.26
UCECchr22463302733'UTRnovel0.33
UCECchr2246326608Missense_MutationnovelP560A0.27
UCECchr22463301853'UTRnovel0.35
UCECchr2246297443Missense_MutationnovelA15T0.3
UCECchr2246316139Missense_MutationnovelA387T0.3
UCECchr2246312286Missense_Mutationrs746573864A303V0.36
UCECchr2246316181Missense_MutationNAD401N0.31
UCECchr2246312287Silentrs753934434A303A0.37
UCECchr2246328809Missense_MutationnovelD616N0.24
UCECchr2246326498Missense_MutationnovelS523N0.41
UCECchr2246330127Missense_MutationnovelF739L0.2
UCECchr2246329450Silentrs61737807C673C0.38
UCECchr2246329242Intronnovel0.31
UCECchr2246316261SilentnovelG427G0.58
UCECchr2246330085SilentnovelP725P0.38
UCECchr2246312152Missense_MutationnovelE258D0.17
UCECchr2246326640Missense_MutationnovelK570N0.19
UCECchr2246329442Missense_Mutationrs762000503D671N0.13
UCECchr2246329133Intronnovel0.69
UCECchr22463301753'UTRnovel0.35
UCECchr2246329304Intronnovel0.41
UCECchr2246308707Frame_Shift_DelnovelP177Lfs*1360.53
UCECchr2246323220Missense_MutationNAL488R0.37
UCECchr2246329192Intronnovel0.57
UCECchr2246326621Missense_Mutationrs139655645R564H0.24
UCECchr2246323245Silentrs146608263S496S0.41
UCECchr2246308520Missense_MutationnovelE113D0.16
UCECchr2246312287Silentrs753934434A303A0.27
UCECchr2246308352SilentnovelP57P0.36
UCECchr2246308185Missense_Mutationrs765830833D39N0.2
UCECchr2246326621Missense_Mutationrs139655645R564H0.26
UCECchr2246329237Intronnovel0.07
UCECchr2246313924Missense_MutationnovelG321D0.05
UCECchr2246297444Missense_Mutationrs369196344A15V0.4
UCECchr2246323239Silentrs762711989P494P0.31
UCECchr2246323242Silentrs568343475Q495Q0.5
UCSchr2246326666Intronnovel0.24
UVMchr2246308648Missense_MutationnovelK156T0.44

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BRCADEL0.41570.036477
DLBCDEL0.08330.21158
LGGDEL0.12670.0042376
LIHCDEL0.16760.05307
LUSCDEL0.16370.006888
PAADDEL0.23910.0001774
PCPGDEL0.33330.044123
READDEL0.34550.00082955
SARCDEL0.26460.016841
STADDEL0.25620.010201
THYMDEL0.07320.063154
UCSDEL0.66070.0013619

Survival Analysis
CancerP-value Q-value
THYM0.0034

Kaplan-Meier Survival Analysis

KIRC0.0001

Kaplan-Meier Survival Analysis

STAD0.0095

Kaplan-Meier Survival Analysis

SARC0.0048

Kaplan-Meier Survival Analysis

MESO0.0001

Kaplan-Meier Survival Analysis

ACC0.00019

Kaplan-Meier Survival Analysis

UCS0.049

Kaplan-Meier Survival Analysis

SKCM0.0013

Kaplan-Meier Survival Analysis

PRAD0.032

Kaplan-Meier Survival Analysis

KIRP0.00012

Kaplan-Meier Survival Analysis

COAD0.0069

Kaplan-Meier Survival Analysis

PAAD0.00029

Kaplan-Meier Survival Analysis

READ0.01

Kaplan-Meier Survival Analysis

KICH0.0049

Kaplan-Meier Survival Analysis

LIHC0.0001

Kaplan-Meier Survival Analysis

LUAD0.00012

Kaplan-Meier Survival Analysis

UVM0.0018

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000075218 (Gene tree)
Gene ID
51512
Gene Symbol
GTSE1
Alias
GTSE-1|B99
Full Name
G2 and S-phase expressed 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
37,686 bases
Position
chr22:46,296,014-46,333,699
Accession
13698
RBP type
non-canonical RBP
Summary
The protein encoded by this gene is only expressed in the S and G2 phases of the cell cycle, where it colocalizes with cytoplasmic tubulin and microtubules. In response to DNA damage, the encoded protein accumulates in the nucleus and binds the tumor suppressor protein p53, shuttling it out of the nucleus and repressing its ability to induce apoptosis. [provided by RefSeq, Jul 2008]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000491863GTSE1-204751--- (aa)--
ENST00000454366GTSE1-2013112XM_005261627ENSP00000415430739 (aa)XP_005261684Q9NYZ3
ENST00000479645GTSE1-2031111--- (aa)--
ENST00000466510GTSE1-2021330--- (aa)--
Gene Model
Click here to download ENSG00000075218's gene model file
Pathways
Pathway IDPathway NameSource
hsa04115p53 signaling pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000075218's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0005515protein binding20577264.IPIFunction
GO:0005654nucleoplasm-TASComponent
GO:0005829cytosol-TASComponent
GO:0005881cytoplasmic microtubule10974554.IDAComponent
GO:0006977DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest10974554.NASProcess
GO:0007017microtubule-based process10974554.NASProcess
GO:0016020membrane19946888.HDAComponent
GO:0030335positive regulation of cell migration-TASProcess
GO:0046827positive regulation of protein export from nucleus-TASProcess
GO:0050821protein stabilization-TASProcess
GO:1900182positive regulation of protein localization to nucleus-TASProcess
GO:1902749regulation of cell cycle G2/M phase transition-TASProcess
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