EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact
TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
24276085The hippo pathway is activated and is a causal mechanism for adipogenesis in arrhythmogenic cardiomyopathy.Circ Res2014 Jan 31Chen SNdoi: 10.1161/CIRCRESAHA.114.302810
21947748Expression of Plakophilins (PKP1, PKP2, and PKP3) in breast cancers.Med Oncol2012 SepDemirag GGdoi: 10.1007/s12032-011-0071-1
22119253Up-regulation of plakophilin-2 and Down-regulation of plakophilin-3 are correlated with invasiveness in bladder cancer.Urology2012 JanTakahashi Hdoi: 10.1016/j.urology.2011.08.049
29044515The human PKP2/plakophilin-2 gene is induced by Wnt/β-catenin in normal and colon cancer-associated fibroblasts.Int J Cancer2018 Feb 15Niell Ndoi: 10.1002/ijc.31104

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1232843273Silentrs377424658G473G0.43
BLCAchr1232802420Missense_MutationnovelS761F0.12
BLCAchr1232878402Missense_MutationnovelH160Y0.1
BLCAchr1232877877Missense_MutationnovelE335K0.21
BLCAchr1232796290Missense_MutationnovelT770S0.45
BLCAchr1232821366Missense_MutationNAG712E0.15
BLCAchr1232796113Missense_Mutationrs151264959D829N0.45
BLCAchr1232869044Missense_MutationNAM351I0.52
BLCAchr1232824143Missense_Mutationrs558637427A570T0.36
BLCAchr1232802557Splice_SiteNAX716_splice0.15
BLCAchr1232878208SilentnovelG224G0.86
BLCAchr1232843244Missense_MutationnovelT483S0.23
BRCAchr1232796292Missense_MutationNAE769G0.18
BRCAchr1232878407Missense_Mutationrs397517027R158K0.08
BRCAchr1232802409Missense_Mutationrs368986542E765Q0.09
BRCAchr1232802552Missense_Mutationrs144018320P717L0.29
BRCAchr1232802443SilentNAL753L0.24
BRCAchr1232802409Nonsense_MutationNAE765*0.26
BRCAchr1232841168Missense_MutationNAK516N0.27
BRCAchr1232878495Frame_Shift_DelnovelQ129Sfs*130.33
BRCAchr1232869033Missense_Mutationrs370868564R355Q0.1
CESCchr1232822502Missense_MutationNAG646R0.16
CESCchr1232792667Missense_Mutationrs727505312E852K0.34
CESCchr1232877963Missense_MutationnovelP306L0.1
CESCchr1232878360Missense_MutationnovelA174S0.49
COADchr1232878065Missense_MutationNAR272M0.33
COADchr1232869034Missense_MutationnovelR355G0.2
COADchr1232841191Missense_MutationNAL509V0.34
COADchr1232868960Silentrs754927123H379H0.36
COADchr1232878245Missense_MutationnovelR212H0.19
COADchr1232878283SilentNAI199I0.57
COADchr1232878158Missense_MutationnovelL241R0.26
COADchr1232802450Missense_MutationNAS751L0.44
COADchr1232796148Missense_MutationnovelG817E0.05
COADchr1232841161Missense_Mutationrs751517092M519V0.33
COADchr12327922593'UTRnovel0.44
COADchr12327923083'UTRnovel0.26
COADchr1232850776Frame_Shift_DelnovelK456Nfs*30.41
COADchr1232850846Missense_MutationnovelV433A0.14
ESCAchr1232824126Silentrs760093803A575A0.14
ESCAchr1232822577Missense_MutationnovelE621Q0.08
GBMchr1232841030Splice_RegionnovelL562L0.04
GBMchr1232824111Silentrs397517006D580D0.42
GBMchr1232802436Missense_MutationnovelL756M0.22
GBMchr1232877867Missense_MutationNAT338I0.27
GBMchr12327923433'UTRnovel0.22
GBMchr1232821431Silentrs538127756I690I0.14
GBMchr1232850833Missense_MutationnovelN437K0.45
GBMchr1232879027Missense_MutationNAL77F0.38
GBMchr1232796232Missense_Mutationrs543233804I789T0.19
GBMchr1232878954Missense_Mutationrs149542398R101H0.41
HNSCchr1232878485Missense_MutationnovelS132F0.2
HNSCchr1232843217Missense_MutationnovelT492R0.58
HNSCchr1232878157SilentnovelL241L0.15
KIRCchr1232796213SilentNAA795A0.48
KIRCchr1232824045Missense_MutationNAK602N0.19
KIRPchr1232878955Missense_Mutationrs796827562R101C0.06
KIRPchr1232850782SilentnovelT454T0.23
LAMLchr1232878441Nonsense_MutationnovelR147*0.07
LAMLchr1232841201SilentnovelL505L0.13
LAMLchr1232850773SilentnovelQ457Q0.08
LGGchr1232878954Missense_Mutationrs149542398R101H0.08
LGGchr1232877909Missense_MutationnovelA324E0.44
LGGchr1232878491Missense_MutationnovelY130C0.05
LGGchr1232821482Silentrs368325383G673G0.24
LGGchr1232878075Missense_Mutationrs757285245G269R0.16
LIHCchr1232878409SilentNAE157E0.12
LIHCchr1232879030Missense_MutationnovelN76H0.26
LIHCchr1232877954Missense_MutationnovelA309V0.29
LUADchr1232821524Nonsense_MutationNAY659*0.12
LUADchr1232802441Missense_MutationNAR754K0.13
LUADchr1232869014SilentnovelE361E0.11
LUADchr1232850829Missense_MutationNAV439I0.61
LUADchr1232796197Missense_MutationnovelN801D0.29
LUADchr1232878020Missense_MutationnovelR287M0.09
LUADchr1232796169Missense_MutationNAA810V0.12
LUADchr1232824071Missense_Mutationrs727503371I594V0.1
LUADchr1232850822Missense_MutationNAR441L0.42
LUADchr1232878512Nonsense_MutationnovelW123*0.27
LUADchr1232796175Missense_MutationNAQ808R0.18
LUADchr1232796276Missense_MutationNAL774F0.13
LUADchr1232824101Missense_MutationnovelD584Y0.16
LUADchr1232878186Missense_MutationNAD232N0.16
LUADchr12327924053'UTRnovel0.13
LUADchr1232822506Missense_MutationNAS644R0.1
LUADchr1232878132Missense_MutationnovelR250G0.3
LUADchr1232896593Frame_Shift_InsnovelG47Rfs*390.45
LUADchr1232896596Frame_Shift_DelnovelR46Afs*660.45
LUADchr1232878931Missense_MutationnovelD109Y0.64
LUADchr1232879001Missense_MutationNAE85D0.1
LUADchr1232822501Missense_MutationnovelG646A0.12
LUADchr1232878129Missense_MutationNAS251C0.41
LUADchr1232824081SilentNAV590V0.1
LUADchr1232878454Missense_MutationnovelR142S0.2
LUADchr1232878455Missense_MutationNAR142M0.2
LUADchr1232821371Silentrs371089832T710T0.68
LUADchr1232878947Frame_Shift_InsnovelV104Cfs*30.31
LUADchr1232822465Splice_SitenovelX657_splice0.27
LUADchr1232879034Splice_SitenovelX75_splice0.21
LUADchr12327924103'UTRnovel0.11
LUADchr1232850862Missense_MutationNAD428H0.33
LUADchr1232878455Missense_MutationnovelR142K0.19
LUADchr1232821476SilentnovelE675E0.26
LUADchr1232850850Nonsense_MutationnovelE432*0.09
LUSCchr1232821520Missense_MutationnovelD661N0.47
LUSCchr1232879032Missense_MutationnovelG75V0.17
LUSCchr1232843186Missense_MutationnovelQ502H0.31
LUSCchr1232878923SilentnovelL111L0.26
LUSCchr1232877875Missense_MutationnovelE335D0.21
LUSCchr1232878411Missense_MutationnovelE157Q0.25
LUSCchr1232868984SilentNAS371S0.21
LUSCchr1232821394Missense_MutationnovelL703V0.36
LUSCchr1232802478Missense_MutationnovelD742Y0.14
LUSCchr1232877930Missense_Mutationrs775318947A317V0.52
LUSCchr1232878269Missense_MutationNAR204L0.56
LUSCchr1232878377Missense_MutationnovelY168C0.25
LUSCchr1232843303SilentNAV463V0.05
LUSCchr1232822520Missense_MutationNAD640N0.04
LUSCchr1232822593SilentnovelS615S0.09
LUSCchr1232792460Missense_MutationNAS870R0.28
OVchr1232822558Missense_MutationNAS627F0.09
OVchr1232878243Missense_MutationNAH213Y0.12
PAADchr1232878398Missense_Mutationrs775789180Y161C0.05
PAADchr1232850851Missense_MutationnovelL431F0.2
PAADchr1232878245Missense_MutationnovelR212H0.17
PRADchr1232822511Missense_MutationNAK643E0.09
READchr1232878192Missense_Mutationrs543281875V230I0.16
READchr12327922793'UTRnovel0.45
READchr1232824127Missense_MutationnovelA575V0.4
READchr1232878229Nonsense_MutationNAY217*0.43
SARCchr1232824144Silentrs780049494G569G0.24
SARCchr1232822599Missense_MutationnovelN613K0.12
SARCchr1232821498Missense_MutationnovelK668R0.27
SKCMchr1232821502Missense_MutationNAE667K0.31
SKCMchr1232841066SilentNAL550L0.32
SKCMchr1232869062Splice_RegionNAG345G0.31
SKCMchr1232824111Silentrs397517006D580D0.18
SKCMchr1232850795Missense_MutationnovelR450K0.45
SKCMchr1232843251Missense_MutationNAP481S0.21
SKCMchr1232878516Missense_Mutationrs759377911R122C0.37
SKCMchr12327924223'UTRnovel0.44
SKCMchr1232802520Missense_MutationNAE728K0.3
SKCMchr1232843311Missense_MutationNAH461Y0.27
SKCMchr1232868928Missense_MutationnovelR390K0.3
SKCMchr1232878206Missense_MutationnovelS225F0.32
SKCMchr1232878283SilentNAI199I0.31
SKCMchr1232850961Missense_Mutationrs761238380R395C0.29
SKCMchr1232879027Missense_MutationNAL77F0.18
SKCMchr1232841162SilentNAL518L0.49
SKCMchr1232877950SilentNAV310V0.94
SKCMchr1232878067SilentNAV271V0.44
SKCMchr1232878034SilentnovelQ282Q0.49
SKCMchr1232878970Missense_MutationNAD96N0.23
SKCMchr1232802432Missense_MutationNAS757F0.31
SKCMchr1232822479SilentNAR653R0.18
SKCMchr1232824123Missense_MutationNAM576I0.31
SKCMchr1232843244Missense_MutationNAT483I0.5
SKCMchr1232850964Missense_MutationNAL394F0.29
SKCMchr1232877973Missense_MutationNAE303K0.08
SKCMchr1232878283SilentNAI199I0.25
SKCMchr1232879032Missense_Mutationrs267603443G75E0.12
SKCMchr1232841038Missense_Mutationrs777207291G560R0.28
SKCMchr1232879006Missense_Mutationrs756468173P84S0.29
SKCMchr1232841114SilentNAP534P0.51
SKCMchr1232802483Missense_MutationnovelV740A0.32
SKCMchr1232878450Missense_MutationnovelP144S0.35
SKCMchr1232878976Missense_MutationnovelE94K0.28
SKCMchr1232878956SilentnovelG100G0.09
SKCMchr1232841065Missense_Mutationrs763427502D551N0.58
SKCMchr1232796263Missense_MutationNAP779S0.41
SKCMchr1232841066SilentNAL550L0.4
SKCMchr1232796293Missense_MutationnovelE769K0.32
SKCMchr1232877998SilentNAS294S0.22
SKCMchr1232878948Missense_MutationNAP103L0.24
SKCMchr1232878294Missense_Mutationrs748957791R196C0.35
SKCMchr1232821461Silentrs138495471S680S0.29
SKCMchr1232822584SilentNAL618L0.25
SKCMchr1232843216Silentrs140301552T492T0.62
SKCMchr1232878471Missense_Mutationrs781739949E137K0.22
SKCMchr1232877956SilentNAV308V0.51
SKCMchr1232792437Missense_MutationNAS878F0.1
SKCMchr12327923873'UTRnovel0.57
SKCMchr1232877867Missense_MutationNAT338I0.32
SKCMchr1232841074Missense_MutationNAG548S0.22
SKCMchr1232879032Missense_Mutationrs267603443G75E0.14
SKCMchr12327923823'UTRnovel0.08
SKCMchr1232796282Frame_Shift_DelnovelK768Rfs*80.13
SKCMchr1232878970Missense_MutationNAD96N0.25
SKCMchr1232796285SilentNAL771L0.35
SKCMchr1232802440SilentNAR754R0.37
SKCMchr1232792481Silentrs777477467K863K0.48
SKCMchr1232878970Missense_MutationNAD96N0.31
SKCMchr1232792481Silentrs777477467K863K0.43
SKCMchr1232878442SilentNAR146R0.17
SKCMchr1232796256Missense_MutationNAT781R0.26
SKCMchr1232877899SilentnovelG327G0.12
SKCMchr1232878195Missense_MutationNAT229S0.26
SKCMchr1232878016SilentNAS288S0.7
SKCMchr1232843222SilentNAR490R0.38
SKCMchr1232850961Missense_Mutationrs761238380R395C0.13
SKCMchr1232878029Missense_MutationnovelR284K0.14
SKCMchr1232878433SilentNAE149E0.12
SKCMchr1232878306Missense_MutationnovelP192S0.31
SKCMchr1232802440SilentNAR754R0.36
SKCMchr1232821502Missense_MutationNAE667K0.51
SKCMchr1232878229SilentNAY217Y0.16
SKCMchr1232878063Missense_Mutationrs765756156P273S0.35
SKCMchr1232821502Missense_MutationNAE667K0.37
SKCMchr12327923433'UTRnovel0.67
SKCMchr1232878970Missense_MutationNAD96N0.32
SKCMchr1232850961Missense_Mutationrs761238380R395C0.12
SKCMchr1232868990SilentNAR369R0.39
SKCMchr12327923823'UTRnovel0.19
SKCMchr1232792698Silentrs772225819S841S0.47
SKCMchr1232878283SilentNAI199I0.38
SKCMchr1232878283SilentNAI199I0.3
SKCMchr1232878283SilentNAI199I0.18
SKCMchr1232850871Missense_MutationnovelE425K0.26
SKCMchr1232792436Silentrs763095604S878S0.27
SKCMchr1232822479SilentNAR653R0.34
SKCMchr1232792667Missense_Mutationrs727505312E852K0.56
SKCMchr1232802440SilentNAR754R0.3
SKCMchr1232824148Missense_MutationnovelA568V0.2
SKCMchr1232868935Missense_Mutationrs766209297R388W0.58
SKCMchr1232878468Missense_MutationnovelE138K0.52
STADchr1232843273Silentrs377424658G473G0.15
STADchr1232878192Missense_Mutationrs543281875V230I0.29
STADchr1232878327Missense_Mutationrs571569344R185W0.06
STADchr1232821482Silentrs368325383G673G0.35
STADchr1232824144Silentrs780049494G569G0.14
STADchr1232877955Missense_Mutationrs761677945A309T0.33
STADchr1232841025Splice_Regionnovel0.1
STADchr1232878103In_Frame_DelnovelE259del0.24
STADchr1232792698Silentrs772225819S841S0.52
STADchr1232877980Silentrs140235564T300T0.26
STADchr1232796114Silentrs727504509G828G0.34
STADchr1232878166Silentrs727503372P238P0.26
STADchr1232878092Missense_Mutationrs543758984T263M0.31
STADchr1232821481Missense_Mutationrs143038626V674M0.29
STADchr1232877905Silentrs369921166A325A0.18
UCECchr1232841155Missense_Mutationrs775192286T521A0.4
UCECchr1232822537Missense_MutationnovelN634S0.34
UCECchr1232878295SilentnovelA195A0.05
UCECchr1232802422SilentnovelL760L0.07
UCECchr1232841164Missense_MutationnovelL518I0.3
UCECchr12327924023'UTRrs3710030540.22
UCECchr1232879025SilentnovelL77L0.18
UCECchr1232796170Missense_Mutationrs779956129A810T0.43
UCECchr1232796251Missense_MutationnovelP783T0.4
UCECchr12327923083'UTRnovel0.38
UCECchr1232802400Splice_Regionnovel0.08
UCECchr12327920583'UTRnovel0.83
UCECchr1232821482Silentrs368325383G673G0.21
UCECchr1232792648In_Frame_InsnovelK858delinsTEIE0.04
UCECchr1232796114Silentrs727504509G828G0.48
UCECchr12327922703'UTRnovel0.24
UCECchr1232878090Missense_MutationNAA264T0.34
UCECchr1232878364SilentnovelS172S0.26
UCECchr1232821512Silentrs760434776P663P0.36
UCECchr1232878051SilentnovelL277L0.37
UCECchr1232878321Missense_Mutationrs200095747A187T0.35
UCECchr1232877979SilentNAL301L0.45
UCECchr1232843251Missense_MutationNAP481S0.5
UCECchr1232824151Missense_MutationnovelS567Y0.36
UCECchr12327922683'UTRnovel0.57
UCECchr1232878484Frame_Shift_InsnovelQ133Dfs*110.09
UCECchr1232802423Missense_MutationNAL760R0.5
UCECchr1232802424Missense_MutationnovelL760I0.35
UCECchr1232821359SilentnovelG714G0.19
UCECchr1232878269Missense_Mutationrs755215178R204H0.34
UCECchr1232868998Missense_MutationnovelP367S0.35
UCECchr1232843203Nonsense_Mutationrs151212477R497*0.5
UCECchr1232877908Silentrs142636176A324A0.41
UCECchr1232877969Missense_MutationnovelA304V0.11
UCECchr1232821518Silentrs752732048D661D0.55
UCECchr1232878194Missense_MutationnovelT229I0.46
UCECchr1232841206Splice_Siters779082302X504_splice0.22
UCECchr1232878327Missense_Mutationrs571569344R185W0.17
UCECchr1232877980Silentrs140235564T300T0.27
UCECchr1232796164Missense_Mutationrs200947767D812N0.38
UCECchr1232792648In_Frame_InsnovelK858delinsTEIE0.05
UCECchr1232822571Missense_MutationnovelP623T0.05
UCECchr1232796164Missense_Mutationrs200947767D812N0.52
UCECchr1232821418Missense_Mutationrs199583774R695C0.38
UCECchr1232822534Missense_Mutationrs755076586R635Q0.55
UCECchr1232850769Missense_MutationnovelT459A0.46
UCECchr1232878388Silentrs747582030S164S0.74
UCECchr1232792648In_Frame_InsnovelK858delinsTEIE0.04
UCECchr1232822522Missense_MutationNAT639I0.44

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
READDEL0.1030.064633

Survival Analysis
CancerP-value Q-value
KIRC0.00037

Kaplan-Meier Survival Analysis

STAD0.0019

Kaplan-Meier Survival Analysis

MESO0.024

Kaplan-Meier Survival Analysis

ACC0.0047

Kaplan-Meier Survival Analysis

KIRP0.016

Kaplan-Meier Survival Analysis

COAD0.0046

Kaplan-Meier Survival Analysis

PAAD0.0095

Kaplan-Meier Survival Analysis

READ0.0041

Kaplan-Meier Survival Analysis

LGG0.014

Kaplan-Meier Survival Analysis

THCA0.046

Kaplan-Meier Survival Analysis

LUAD0.0001

Kaplan-Meier Survival Analysis

UVM0.0016

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000057294 (Gene tree)
Gene ID
5318
Gene Symbol
PKP2
Alias
N
Full Name
plakophilin 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
106,102 bases
Position
chr12:32,790,745-32,896,846
Accession
9024
RBP type
non-canonical RBP
Summary
This gene encodes a member of the arm-repeat (armadillo) and plakophilin gene families. Plakophilin proteins contain numerous armadillo repeats, localize to cell desmosomes and nuclei, and participate in linking cadherins to intermediate filaments in the cytoskeleton. This gene product may regulate the signaling activity of beta-catenin. Two alternately spliced transcripts encoding two protein isoforms have been identified. A processed pseudogene with high similarity to this locus has been mapped to chromosome 12p13. [provided by RefSeq, Jul 2008]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
25225333Plakophilins 1 and 3 bind to FXR1 and thereby influence the mRNA stability of desmosomal proteins.Mol Cell Biol2014 Dec 1Fischer-Keso Rdoi: 10.1128/MCB.00766-14
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000546769PKP2-205782--- (aa)--
ENST00000546741PKP2-2041563-ENSP0000048138336 (aa)-A0A087WXY2
ENST00000340811PKP2-2024302-ENSP00000342800837 (aa)-Q99959
ENST00000546498PKP2-203589--- (aa)--
ENST00000552612PKP2-207901--- (aa)--
ENST00000070846PKP2-2014241-ENSP00000070846881 (aa)-Q99959
ENST00000549461PKP2-206566--- (aa)--
Gene Model
Click here to download ENSG00000057294's gene model file
Pathways
Pathway IDPathway NameSource
hsa05412Arrhythmogenic right ventricular cardiomyopathy (ARVC)KEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000057294Platelet Function Tests1.7890500E-005-
ENSG00000057294Platelet Function Tests1.0843100E-005-
ENSG00000057294Platelet Function Tests1.0843100E-005-
ENSG00000057294Platelet Function Tests1.6594600E-005-
ENSG00000057294Platelet Function Tests1.1731400E-005-
ENSG00000057294Lithium1.3910400E-005-
ENSG00000057294Body Composition3E-623251661
ENSG00000057294Periodontitis1E-826962152
ENSG00000057294Tooth1E-826962152
ENSG00000057294Body Composition9E-623251661
ENSG00000057294Body Composition3E-623251661
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000057294rs64880991232882549?Periodontal disease-related phenotypes26962152[0.19-0.39] unit increase0.29EFO_0000649|EFO_0007780
ENSG00000057294rs14549331232864109CObesity-related traits23251661[NR] kcal/d increase0.04EFO_0005106
ENSG00000057294rs14549331232864109CObesity-related traits23251661[NR] kg/y increase0.03EFO_0005106
ENSG00000057294rs14549331232864109CObesity-related traits23251661[NR] kcal/d increase0.04EFO_0005106
ENSG00000057294rs128093541232825503CAtrial fibrillation30061737[1.05-1.09]1.07EFO_0000275
ENSG00000057294rs14549341232820006TPrevalent atrial fibrillation284168181.1-1.221.16EFO_0000275
ENSG00000057294rs128093541232825503CAtrial fibrillation29892015[1.06-1.11]1.08EFO_0000275
ENSG00000057294rs128093541232825503CAtrial fibrillation29892015[1.07-1.11]1.09EFO_0000275
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000057294's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000057294PKP210078.375ENSMUSG00000041957Pkp210078.495Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001533cornified envelope-TASComponent
GO:0002159desmosome assembly18474624.IMPProcess
GO:0005080protein kinase C binding21873635.IBAFunction
GO:0005080protein kinase C binding18474624.IPIFunction
GO:0005515protein binding10852826.25416956.28169297.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus8922383.NASComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005882intermediate filament21873635.IBAComponent
GO:0005882intermediate filament-ISSComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0005886plasma membrane20859650.23863954.IDAComponent
GO:0005886plasma membrane-TASComponent
GO:0005911cell-cell junction21873635.IBAComponent
GO:0005911cell-cell junction-ISSComponent
GO:0005912adherens junction-ISSComponent
GO:0005913cell-cell adherens junction21873635.IBAComponent
GO:0007043cell-cell junction assembly21873635.IBAProcess
GO:0007507heart development21873635.IBAProcess
GO:0007507heart development-ISSProcess
GO:0010765positive regulation of sodium ion transport-ISSProcess
GO:0014704intercalated disc21873635.IBAComponent
GO:0014704intercalated disc22781308.IDAComponent
GO:0014704intercalated disc-ISSComponent
GO:0016021integral component of membrane8922383.TASComponent
GO:0017080sodium channel regulator activity-ISSFunction
GO:0019215intermediate filament binding21873635.IBAFunction
GO:0019215intermediate filament binding10852826.IDAFunction
GO:0030054cell junction-IDAComponent
GO:0030057desmosome-ISSComponent
GO:0030057desmosome8922383.NASComponent
GO:0031424keratinization-TASProcess
GO:0034334adherens junction maintenance21873635.IBAProcess
GO:0044325ion channel binding-ISSFunction
GO:0045110intermediate filament bundle assembly21873635.IBAProcess
GO:0045110intermediate filament bundle assembly18474624.IMPProcess
GO:0045294alpha-catenin binding21873635.IBAFunction
GO:0045294alpha-catenin binding23136403.IPIFunction
GO:0045296cadherin binding25468996.HDAFunction
GO:0045296cadherin binding21873635.IBAFunction
GO:0048496maintenance of animal organ identity22889254.IMPProcess
GO:0055010ventricular cardiac muscle tissue morphogenesis22889254.IMPProcess
GO:0060090molecular adaptor activity21873635.IBAFunction
GO:0060090molecular adaptor activity18474624.IMPFunction
GO:0070268cornification-TASProcess
GO:0072659protein localization to plasma membrane21873635.IBAProcess
GO:0072659protein localization to plasma membrane23863954.IMPProcess
GO:0086002cardiac muscle cell action potential involved in contraction22889254.IMPProcess
GO:0086005ventricular cardiac muscle cell action potential22889254.IMPProcess
GO:0086019cell-cell signaling involved in cardiac conduction21873635.IBAProcess
GO:0086019cell-cell signaling involved in cardiac conduction22889254.IMPProcess
GO:0086064cell communication by electrical coupling involved in cardiac conduction-ISSProcess
GO:0086073bundle of His cell-Purkinje myocyte adhesion involved in cell communication22889254.IMPProcess
GO:0086083cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication22889254.ICFunction
GO:0086091regulation of heart rate by cardiac conduction17980246.22889254.IMPProcess
GO:0098609cell-cell adhesion21873635.IBAProcess
GO:0098609cell-cell adhesion-ISSProcess
GO:0098609cell-cell adhesion8922383.NASProcess
GO:0098911regulation of ventricular cardiac muscle cell action potential22889254.IMPProcess
GO:1990124messenger ribonucleoprotein complex25225333.IDAComponent
To top

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us