RNA binding domains(RBDs)
| Protein ID | Domain |
Pfam ID | E-value |
Domain number |
Total number |
|---|
| ENSP00000480832 | Nop16 | PF09420.10 | 6.6e-22 | 1 | 2 |
|---|
| ENSP00000480832 | Nop16 | PF09420.10 | 6.6e-22 | 2 | 2 |
|---|
| ENSP00000427489 | Nop16 | PF09420.10 | 1.4e-11 | 1 | 1 |
|---|
| ENSP00000479445 | Nop16 | PF09420.10 | 3.5e-11 | 1 | 1 |
|---|
| ENSP00000483001 | Nop16 | PF09420.10 | 3.9e-11 | 1 | 1 |
|---|
| ENSP00000484969 | Nop16 | PF09420.10 | 4.3e-11 | 1 | 1 |
|---|
RNA binding proteome (RBPome)
| PID | Title | Method |
Time | Author | Doi |
|---|
| 22681889 | The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts | 4SURIC & HEK293 | 2012 May | Baltz AG | DOI: 10.1016/j.molcel.2012.05.021 |
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & HEK293 | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & HEK293 | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
| 29431736 | Capturing the interactome of newly transcribed RNA | PolyT-RICK & Hela | 2018 Feb 12 | Bao X | DOI: 10.1038/nmeth.4595 |
| 29431736 | Capturing the interactome of newly transcribed RNA | PolyT & Hela | 2018 Feb 12 | Bao X | DOI: 10.1038/nmeth.4595 |
| 22658674 | Insights into RNA biology from an atlas of mammalian mRNA-binding proteins | polyT & Hela | 2012 May 31 | Castello A | DOI: 10.1016/j.cell.2012.04.031 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & Hela | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & MCF10A | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & MCF7 | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & U2OS | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
Protein-Protein Interaction (PPI)
