EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
12384782ELAC2 and prostate cancer risk in Afro-Caribbeans of Tobago.Hum Genet2002 OctShea PR-
14504198Association of HPC2/ELAC2 polymorphisms with risk of prostate cancer in a population-based study.Cancer Epidemiol Biomarkers Prev2003 SepStanford JL-
11175785A candidate prostate cancer susceptibility gene at chromosome 17p.Nat Genet2001 FebTavtigian SV-
16114055Association of hereditary prostate cancer gene polymorphic variants with sporadic aggressive prostate carcinoma.Prostate2006 Jan 1Noonan-Wheeler FC-
18375959Sequence variants of elaC homolog 2 (Escherichia coli) (ELAC2) gene and susceptibility to prostate cancer in the Health Professionals Follow-Up Study.Carcinogenesis2008 MayChen YCdoi: 10.1093/carcin/bgn081
18767027Association of HPC2/ELAC2 and RNASEL non-synonymous variants with prostate cancer risk in African American familial and sporadic cases.Prostate2008 Dec 1Robbins CMdoi: 10.1002/pros.20841.
12522685Association of common missense changes in ELAC2 ( HPC2) with prostate cancer in a Japanese case-control series.J Hum Genet2002Fujiwara H-
16636667ELAC2, a putative prostate cancer susceptibility gene product, potentiates TGF-beta/Smad-induced growth arrest of prostate cells.Oncogene2006 Sep 14Noda D-
12949798Ser217Leu polymorphism of the HPC2/ELAC2 gene associated with prostatic cancer risk in Japanese men.Int J Cancer2003 Nov 1Takahashi H-
20231859ELAC2 polymorphisms and prostate cancer risk: a meta-analysis based on 18 case-control studies.Prostate Cancer Prostatic Dis2010 SepXu Bdoi: 10.1038/pcan.2010.6
12783937ELAC2/HPC2 polymorphisms, prostate-specific antigen levels, and prostate cancer.J Natl Cancer Inst2003 Jun 4Severi G-
14625808HPC2/ELAC2 gene variants associated with incident prostate cancer.J Hum Genet2003Adler D-
12515253Meta-analysis of associations of the Ser217Leu and Ala541Thr variants in ELAC2 (HPC2) and prostate cancer.Am J Hum Genet2002 DecCamp NJ-
20086112Single and multivariate associations of MSR1, ELAC2, and RNASEL with prostate cancer in an ethnic diverse cohort of men.Cancer Epidemiol Biomarkers Prev2010 FebBeuten Jdoi: 10.1158/1055-9965.EPI-09-0864

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1713002573SilentnovelG362G0.04
BLCAchr1712993709Missense_MutationNAG744E0.11
BLCAchr1713010659Missense_MutationnovelR231K0.64
BLCAchr1712996499Intronnovel0.42
BLCAchr17129927943'UTRnovel0.5
BRCAchr1713010650Missense_MutationnovelV234A0.06
BRCAchr1712993738SilentNAL734L0.3
BRCAchr1713002342SilentnovelL412L0.54
BRCAchr1713010658SilentNAR231R0.43
BRCAchr1713003968Intronnovel0.5
BRCAchr1712998454Missense_MutationNAP493L0.45
BRCAchr1713000179Missense_Mutationrs749460308A467V0.17
BRCAchr1712993744SilentNAV732V0.51
BRCAchr1712993746Missense_MutationnovelV732L0.19
CESCchr1713000325Intronnovel0.8
CESCchr1712996676Silentrs202041978T510T0.17
CESCchr1713003586Intronnovel0.45
CESCchr1713005023Missense_MutationnovelI317V0.14
CESCchr1712995794Missense_MutationnovelL573F0.19
CESCchr1713000342Intronnovel0.63
CHOLchr1713000307Intronnovel0.21
COADchr1712993762SilentNAS726S0.34
COADchr1713016894Missense_MutationnovelR112P0.22
COADchr1713003695Intronnovel0.5
COADchr1713002505Missense_MutationnovelI385T0.38
COADchr1713011696Missense_MutationnovelE216K0.28
COADchr1712993825Silentrs755866051T705T0.33
COADchr1712993720Silentrs140626107S740S0.13
COADchr1712992927Missense_Mutationrs148819805R791Q0.41
COADchr1712998500Missense_MutationnovelS478G0.31
COADchr1713011769In_Frame_DelNAR191del0.23
COADchr1713000226Silentrs776280164L451L0.2
COADchr1712992980Silentrs550032568G773G0.36
COADchr1712996655SilentNAG517G0.24
COADchr1712996047Intronnovel0.26
COADchr1713005783Silentrs369092504D280D0.28
COADchr1713013271Silentrs751671002V165V0.07
COADchr1712993782Missense_MutationNAI720V0.11
COADchr17129927683'UTRnovel0.12
COADchr1712996537Intronnovel0.65
COADchr1712992944SilentNAR785R0.32
COADchr1713000230Frame_Shift_DelnovelA450Gfs*450.12
COADchr17129927653'UTRnovel0.18
ESCAchr1712995768Frame_Shift_DelnovelN582Tfs*230.15
ESCAchr1713000178Silentrs146858023A467A0.13
ESCAchr1712994812Missense_Mutationrs747446525V661L0.31
GBMchr1713005971Missense_MutationnovelL249F0.28
GBMchr1713000334Intronnovel0.12
GBMchr1713011667SilentnovelP225P0.14
GBMchr1713002565Frame_Shift_InsnovelT365Ifs*80.06
GBMchr1712994854Missense_MutationnovelH647D0.13
GBMchr1712993793Missense_MutationnovelN716S0.12
GBMchr1713005078SilentnovelT298T0.05
GBMchr1713006084Intronnovel0.19
HNSCchr1713013271SilentnovelV165V0.33
HNSCchr1713005918Splice_Regionnovel0.38
HNSCchr1713002360Splice_SitenovelX407_splice0.25
HNSCchr1713011696Missense_MutationnovelE216K0.12
HNSCchr1713002336SilentnovelV414V0.28
HNSCchr1713005789SilentnovelV278V0.13
HNSCchr17129927963'UTRnovel0.14
HNSCchr1713002499Frame_Shift_InsnovelT387Mfs*630.25
HNSCchr1713003682Intronnovel0.33
HNSCchr1713013270Missense_Mutationrs766783415R166W0.34
KICHchr1712992945Missense_MutationnovelR785Q0.83
KICHchr1712995026SilentnovelE615E0.04
KIRCchr17129927463'UTRnovel0.27
KIRCchr1713002356Missense_MutationNAE408K0.4
KIRCchr1713016902SilentNAF109F0.32
KIRPchr1712994873Silentrs753389017C640C0.49
LAMLchr1713003968Intronnovel0.63
LAMLchr1713003968Intronnovel0.5
LGGchr1712994838Missense_Mutationrs761881914A652V0.19
LGGchr1713005036SilentnovelP312P0.11
LIHCchr1713003556SilentnovelD334D0.35
LIHCchr1713015821Missense_MutationnovelT127A0.13
LIHCchr1713017944Missense_MutationnovelW2R0.17
LIHCchr1713002352Missense_MutationNAG409D0.56
LIHCchr1713002283Missense_MutationnovelE432V0.5
LIHCchr1712992985Missense_MutationNAA772P0.8
LIHCchr17130179855'UTRnovel0.31
LIHCchr1712994494Missense_MutationnovelA680V0.13
LUADchr1713002356Missense_MutationNAE408K0.08
LUADchr1713011772Missense_MutationnovelR190S0.08
LUADchr1713000320Intronnovel0.13
LUADchr1713002292Missense_MutationNAP429R0.09
LUADchr1713002295Missense_MutationNAR428L0.29
LUSCchr1713002352Missense_MutationnovelG409V0.81
LUSCchr1712993774SilentNAL722L0.44
LUSCchr1712994487SilentnovelL682L0.16
LUSCchr1713013204Splice_Regionnovel0.2
LUSCchr1713002464Frame_Shift_DelnovelL399Cfs*490.24
LUSCchr1713002503Missense_MutationNAQ386E0.14
LUSCchr1713005001Missense_MutationNAA324V0.22
LUSCchr1713000387Intronnovel0.24
MESOchr1712996652Missense_MutationnovelE518D0.3
OVchr1713003568Frame_Shift_InsnovelG331Rfs*340.18
OVchr1712992944SilentNAR785R0.23
OVchr1713005814Missense_MutationnovelA270D0.07
OVchr1713017741Missense_MutationnovelD69E0.25
PAADchr1713000230Missense_Mutationrs759926685A450V0.17
PAADchr1713005808Missense_MutationnovelA272D0.19
PAADchr1713006052Intronnovel0.2
PRADchr1713015797Nonsense_MutationnovelK135Vfs*70.1
PRADchr1713000307Intronnovel0.49
READchr1713005949Missense_Mutationrs777491508L257F0.42
READchr1712996366Intronnovel0.31
SARCchr1713014497Splice_SitenovelX145_splice0.33
SARCchr1712995725Missense_MutationnovelQ596K0.05
SARCchr1713003514Frame_Shift_DelnovelV348Afs*160.44
SKCMchr1712992819Silentrs533278704*827*0.57
SKCMchr1713000339Intronnovel0.25
SKCMchr1713015800Missense_MutationNAP134S0.34
SKCMchr1712993743Missense_Mutationrs758585863P733S0.41
SKCMchr1712995021Missense_MutationNAS617F0.55
SKCMchr1712995015Missense_MutationNAP619L0.37
SKCMchr1712998476Missense_MutationNAL486F0.12
SKCMchr1713005068Missense_MutationNAP302S0.44
SKCMchr1713002345Silentrs745763181T411T0.13
SKCMchr1713000211SilentNAF456F0.32
SKCMchr1712995055Missense_MutationNAP606S0.3
SKCMchr1712992946Missense_MutationNAR785W0.19
SKCMchr1712996467Intronnovel0.53
SKCMchr1713017714SilentnovelS78S0.33
SKCMchr1713017715Missense_MutationnovelS78F0.35Lactamase_B_4
SKCMchr1713000210Nonsense_MutationNAQ457*0.26
SKCMchr1712994802Missense_MutationNAS664F0.25
SKCMchr1712995789Silentrs770617287H574H0.33
SKCMchr1712998483SilentNAI483I0.2
SKCMchr1713000185Missense_MutationNAR465K0.58
SKCMchr1712994770Missense_MutationNAR675W0.29
SKCMchr1712992936Missense_Mutationrs567494102R788Q0.23
STADchr1712994434Missense_MutationNAK700T0.09
STADchr1713005783Silentrs369092504D280D0.15
STADchr1712994805Missense_MutationnovelY663C0.34
STADchr1713006108Intronnovel0.27
STADchr1713000229Silentrs375565327A450A0.17
STADchr1712992895Missense_Mutationrs147779718G802S0.3
STADchr17129927593'UTRnovel0.19
STADchr1713006070IntronNA0.3
STADchr1713006070IntronNA0.52
STADchr1713003700Intronnovel0.43
STADchr1713003523SilentnovelP345P0.49
STADchr1712996453Intronnovel0.34
STADchr1713005754Missense_MutationNAE290G0.31
STADchr1713002329Missense_MutationnovelV417L0.17
TGCTchr1713017768Silentrs370459638L60L0.2
UCECchr1713006070IntronNA0.57
UCECchr1713002515Missense_MutationNAS382G0.32
UCECchr1713000178Silentrs146858023A467A0.23
UCECchr1712998502Missense_MutationNAR477I0.31
UCECchr1712995009Missense_MutationnovelV621A0.3
UCECchr1713006070IntronNA0.49
UCECchr1713003567Nonsense_MutationnovelG331*0.41
UCECchr17129927593'UTRnovel0.23
UCECchr1712996461Intronnovel0.19
UCECchr1712998476Missense_MutationnovelL486I0.09
UCECchr1713006105Intronnovel0.32
UCECchr17129927593'UTRnovel0.43
UCECchr1712994505Splice_SitenovelX677_splice0.03
UCECchr1713006130IntronNA0.2
UCECchr1712993792Silentrs759078534N716N0.23
UCECchr1713011760Missense_MutationnovelH194Q0.21
UCECchr1712994877Missense_MutationnovelT639I0.15
UCECchr1712996548Missense_Mutationrs755904309T553M0.38
UCECchr1713003661Intronnovel0.56
UCECchr17129927543'UTRnovel0.2
UCECchr1712992960Missense_MutationnovelE780G0.17
UCECchr1713014484Missense_Mutationrs779607134E149K0.15
UCECchr1713005814Missense_Mutationrs111531241A270V0.43
UCECchr1713005818Missense_MutationnovelA269T0.25
UCECchr1712996514Intronnovel0.44
UCECchr1713006099Intronnovel1
UCECchr1712995759Silentrs372108840L584L0.5
UCECchr1713005809Missense_Mutationrs765353090A272T0.12
UCECchr1712993792Silentrs759078534N716N0.41
UCECchr1713002345Silentrs745763181T411T0.47
UCECchr1713003540Missense_MutationnovelV340M0.47
UCECchr1713016891Missense_MutationnovelM113T0.12
UCECchr1712994849SilentnovelA648A0.4
UCECchr17129927663'UTRrs5408861980.41
UCECchr1713003527Missense_MutationnovelA344V0.59
UCECchr1713011691Silentrs201530031S217S0.07
UCECchr1713005775Missense_MutationnovelS283I0.16
UCECchr1713011740Missense_MutationnovelE201A0.29
UCECchr1713000202SilentNAS459S0.23
UCECchr1713005755Nonsense_MutationnovelE290*0.08
UCECchr1712998454Missense_MutationNAP493L0.41
UCECchr1712992883Missense_MutationNAG806R0.57
UCECchr1713005067Missense_MutationNAP302H0.27
UCECchr1712992937Missense_Mutationrs749996506R788W0.35
UCECchr1713002464Missense_MutationNAL399M0.06
UCECchr1712993014Missense_MutationNAK762T0.2
UCECchr1713006046Intronnovel0.4
UCECchr1712998443Nonsense_Mutationrs550032922R497*0.43
UCECchr17129928003'UTRnovel0.35
UCECchr1712994843SilentnovelG650G0.28
UCECchr1712996372Intronnovel0.19
UCECchr1713005992Intronnovel0.05
UCECchr1712995755Missense_MutationnovelA586T0.52
UCECchr1713000307Intronnovel0.28
UCECchr1712993825Silentrs755866051T705T0.37
UCECchr1712998442Missense_Mutationrs531523727R497Q0.37
UCECchr1713000297Intronnovel0.34
UCECchr1713011751Nonsense_MutationnovelW197*0.39
UCECchr17129927223'UTRnovel0.33
UCECchr1712992974Silentrs775479429I775I0.41
UCSchr1712994426Frame_Shift_DelnovelH702Qfs*460.39

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.16670.18166
ESCADEL0.40220.074408
READDEL0.67270.077076
SARCAMP0.35029.3248e-17
THCADEL0.0140.221
UCECDEL0.25050.00043918
UCSDEL0.71430.044844

Survival Analysis
CancerP-value Q-value
KIRC0.014

Kaplan-Meier Survival Analysis

UCS0.023

Kaplan-Meier Survival Analysis

SKCM0.0025

Kaplan-Meier Survival Analysis

BRCA0.037

Kaplan-Meier Survival Analysis

KIRP0.0055

Kaplan-Meier Survival Analysis

PAAD0.0037

Kaplan-Meier Survival Analysis

BLCA0.038

Kaplan-Meier Survival Analysis

LAML0.0057

Kaplan-Meier Survival Analysis

UCEC0.0042

Kaplan-Meier Survival Analysis

UVM0.00089

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000006744 (Gene tree)
Gene ID
60528
Gene Symbol
ELAC2
Alias
FLJ10530|HPC2
Full Name
elaC ribonuclease Z 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
26,576 bases
Position
chr17:12,991,612-13,018,187
Accession
14198
RBP type
canonical RBP
Summary
The protein encoded by this gene has a C-terminal domain with tRNA 3′ processing endoribonuclease activity, which catalyzes the removal of the 3' trailer from precursor tRNAs. The protein also interacts with activated Smad family member 2 (Smad2) and its nuclear partner forkhead box H1 (also known as FAST-1), and reduced expression can suppress transforming growth factor-beta induced growth arrest. Mutations in this gene result in an increased risk of prostate cancer. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000477482Lactamase_B_4PF13691.67.3e-1711
ENSP00000405223Lactamase_B_4PF13691.64.7e-1611
ENSP00000337445Lactamase_B_4PF13691.65.2e-1611
ENSP00000379291Lactamase_B_4PF13691.68.5e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
17671357The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes.Acta Crystallogr Sect F Struct Biol Cryst Commun2007 Aug 1Ishii R-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000578071ELAC2-212579-ENSP00000477482158 (aa)-V9GZ72
ENST00000476042ELAC2-206428-ENSP0000046388445 (aa)-J3QQT1
ENST00000426905ELAC2-2032671XM_024450854ENSP00000405223786 (aa)XP_024306622Q9BQ52
ENST00000480891ELAC2-2072737--- (aa)--
ENST00000583371ELAC2-217479-ENSP00000464358122 (aa)-J3QRS2
ENST00000584650ELAC2-2182087-ENSP00000463740626 (aa)-E7ES68
ENST00000609345ELAC2-220849--- (aa)--
ENST00000484122ELAC2-2083738--- (aa)--
ENST00000487229ELAC2-2092452--- (aa)--
ENST00000578991ELAC2-214550--- (aa)--
ENST00000580504ELAC2-215579-ENSP00000463594148 (aa)-J3QLK4
ENST00000578104ELAC2-213664--- (aa)--
ENST00000609757ELAC2-221588-ENSP00000477093124 (aa)-V9GYU5
ENST00000338034ELAC2-2013148XM_024450850ENSP00000337445826 (aa)XP_024306618Q9BQ52
ENST00000465825ELAC2-2052793--- (aa)--
ENST00000446899ELAC2-204858-ENSP00000406192286 (aa)-H7C2I4
ENST00000581499ELAC2-216581-ENSP00000463321132 (aa)-J3QL08
ENST00000609101ELAC2-219866-ENSP00000477044242 (aa)-V9GYS7
ENST00000492559ELAC2-211615--- (aa)--
ENST00000491478ELAC2-210758--- (aa)--
ENST00000395962ELAC2-2022924XM_024450856ENSP00000379291807 (aa)XP_024306624G5E9D5
Gene Model
Click here to download ENSG00000006744's gene model file
Pathways
Pathway IDPathway NameSource
hsa03013RNA transportKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000006744Respiratory Function Tests8.12171927270868E-617903307
ENSG00000006744Echocardiography6.71965115106588E-517903301
ENSG00000006744Echocardiography8.85489686242025E-517903301
ENSG00000006744Walking2.68096320554501E-517903295
ENSG00000006744Walking2.68096320554501E-517903295
ENSG00000006744Hemoglobin A, Glycosylated6.4100000E-00519875614
ENSG00000006744Cholesterol, LDL1.998e-00519060910
ENSG00000006744Blood Glucose6.6180000E-005-
ENSG00000006744Insulin7.7770000E-005-
ENSG00000006744Eosinophils8.6130000E-005-
ENSG00000006744Urine6.8608935E-006-
ENSG00000006744Platelet Function Tests3.4412900E-005-
ENSG00000006744Platelet Function Tests6.3700000E-006-
ENSG00000006744Platelet Function Tests1.4100700E-005-
ENSG00000006744Platelet Function Tests1.9399300E-005-
ENSG00000006744Platelet Function Tests2.2059100E-005-
ENSG00000006744Platelet Function Tests1.3946857E-006-
ENSG00000006744Platelet Function Tests3.4246273E-007-
ENSG00000006744Child Development Disorders, Pervasive9.8872000E-006-
ENSG00000006744Child Development Disorders, Pervasive1.6597000E-005-
ENSG00000006744Autistic Disorder3.5512000E-005-
ENSG00000006744Child Development Disorders, Pervasive4.7196000E-005-
ENSG00000006744Autistic Disorder9.3941000E-006-
ENSG00000006744Autistic Disorder2.4899000E-005-
ENSG00000006744Autistic Disorder1.5212000E-005-
ENSG00000006744Substance-Related Disorders2E-622823124
ENSG00000006744Agranulocytosis5E-627400856
ENSG00000006744Clozapine5E-627400856
ENSG00000006744Schizophrenia5E-627400856
ENSG00000006744Schizophrenia2E-626198764
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000006744rs99081021712993236TSchizophrenia26198764[NR]1.05EFO_0000692
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000006744's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000006744ELAC29861.345ENSAPOG00000002563elac29159.728Acanthochromis_polyacanthus
ENSG00000006744ELAC29985.950ENSAMEG00000010418ELAC210079.493Ailuropoda_melanoleuca
ENSG00000006744ELAC28368.702ENSACIG00000010330elac27864.539Amphilophus_citrinellus
ENSG00000006744ELAC29863.866ENSAOCG00000003756elac29159.144Amphiprion_ocellaris
ENSG00000006744ELAC29863.866ENSAPEG00000019425elac29258.625Amphiprion_percula
ENSG00000006744ELAC210057.255ENSATEG00000020251elac29059.795Anabas_testudineus
ENSG00000006744ELAC29670.085ENSACAG00000017398ELAC29366.456Anolis_carolinensis
ENSG00000006744ELAC210091.730ENSANAG00000036642ELAC210091.730Aotus_nancymaae
ENSG00000006744ELAC210058.400ENSACLG00000020349elac29160.758Astatotilapia_calliptera
ENSG00000006744ELAC210081.922ENSBTAG00000021939ELAC210081.922Bos_taurus
ENSG00000006744ELAC210091.349ENSCJAG00000004542ELAC210091.349Callithrix_jacchus
ENSG00000006744ELAC29985.124ENSCAFG00000017886ELAC210082.431Canis_familiaris
ENSG00000006744ELAC29985.124ENSCAFG00020000574ELAC210081.370Canis_lupus_dingo
ENSG00000006744ELAC210078.821ENSCHIG00000025992ELAC210078.821Capra_hircus
ENSG00000006744ELAC29990.083ENSTSYG00000005202ELAC210088.041Carlito_syrichta
ENSG00000006744ELAC29984.298ENSCPOG00000009098ELAC29980.549Cavia_porcellus
ENSG00000006744ELAC29992.562ENSCCAG00000036307ELAC210090.840Cebus_capucinus
ENSG00000006744ELAC210097.581ENSCATG00000030564ELAC210094.304Cercocebus_atys
ENSG00000006744ELAC29985.816ENSCLAG00000007156ELAC210081.742Chinchilla_lanigera
ENSG00000006744ELAC210098.387ENSCSAG00000009057ELAC210093.462Chlorocebus_sabaeus
ENSG00000006744ELAC29968.939ENSCPBG00000027769ELAC29966.196Chrysemys_picta_bellii
ENSG00000006744ELAC210095.041ENSCANG00000040743ELAC210094.148Colobus_angolensis_palliatus
ENSG00000006744ELAC210084.800ENSCGRG00001023086Elac29779.641Cricetulus_griseus_chok1gshd
ENSG00000006744ELAC210083.200ENSCGRG00000011564Elac29974.502Cricetulus_griseus_crigri
ENSG00000006744ELAC29459.218ENSCSEG00000020630elac29355.851Cynoglossus_semilaevis
ENSG00000006744ELAC29959.821ENSCVAG00000003649elac29959.821Cyprinodon_variegatus
ENSG00000006744ELAC29858.025ENSDARG00000034060elac29259.470Danio_rerio
ENSG00000006744ELAC210078.512ENSDNOG00000004242ELAC29974.486Dasypus_novemcinctus
ENSG00000006744ELAC29784.477ENSDORG00000005592Elac29883.196Dipodomys_ordii
ENSG00000006744ELAC29434.110FBgn0028426JhI-19533.543Drosophila_melanogaster
ENSG00000006744ELAC29549.398ENSEBUG00000011361elac28849.860Eptatretus_burgeri
ENSG00000006744ELAC29985.950ENSEASG00005016922ELAC210084.699Equus_asinus_asinus
ENSG00000006744ELAC29859.220ENSELUG00000018265elac29359.690Esox_lucius
ENSG00000006744ELAC29985.950ENSFCAG00000008407ELAC210082.500Felis_catus
ENSG00000006744ELAC29986.066ENSFDAG00000010293ELAC210080.964Fukomys_damarensis
ENSG00000006744ELAC29763.333ENSFHEG00000015744elac28859.735Fundulus_heteroclitus
ENSG00000006744ELAC28267.763ENSGMOG00000008574elac29467.763Gadus_morhua
ENSG00000006744ELAC29862.857ENSGALG00000001036ELAC29859.880Gallus_gallus
ENSG00000006744ELAC29966.667ENSGAFG00000005456elac29966.667Gambusia_affinis
ENSG00000006744ELAC29955.556ENSGACG00000014454elac29958.521Gasterosteus_aculeatus
ENSG00000006744ELAC210069.697ENSGAGG00000017133ELAC29369.895Gopherus_agassizii
ENSG00000006744ELAC2100100.000ENSGGOG00000015850ELAC2100100.000Gorilla_gorilla
ENSG00000006744ELAC210058.400ENSHBUG00000017777elac28959.631Haplochromis_burtoni
ENSG00000006744ELAC29985.950ENSHGLG00000005718ELAC210080.788Heterocephalus_glaber_female
ENSG00000006744ELAC29985.950ENSHGLG00100003619ELAC210080.549Heterocephalus_glaber_male
ENSG00000006744ELAC210056.735ENSHCOG00000006972elac29361.312Hippocampus_comes
ENSG00000006744ELAC29857.801ENSIPUG00000022303elac28960.705Ictalurus_punctatus
ENSG00000006744ELAC29989.256ENSSTOG00000006680ELAC210084.337Ictidomys_tridecemlineatus
ENSG00000006744ELAC27654.184ENSKMAG00000019598elac29954.321Kryptolebias_marmoratus
ENSG00000006744ELAC27864.844ENSKMAG00000019583-7165.873Kryptolebias_marmoratus
ENSG00000006744ELAC29855.674ENSLBEG00000027524elac28957.935Labrus_bergylta
ENSG00000006744ELAC28970.370ENSLOCG00000012146elac29461.965Lepisosteus_oculatus
ENSG00000006744ELAC29984.298ENSLAFG00000009404ELAC210081.325Loxodonta_africana
ENSG00000006744ELAC210097.581ENSMFAG00000041840ELAC210094.304Macaca_fascicularis
ENSG00000006744ELAC210097.581ENSMMUG00000014450ELAC210094.304Macaca_mulatta
ENSG00000006744ELAC210097.581ENSMNEG00000044872ELAC210093.766Macaca_nemestrina
ENSG00000006744ELAC29858.650ENSMAMG00000019957elac29259.893Mastacembelus_armatus
ENSG00000006744ELAC210058.400ENSMZEG00005000530elac28959.763Maylandia_zebra
ENSG00000006744ELAC210087.200ENSMAUG00000019006Elac210081.146Mesocricetus_auratus
ENSG00000006744ELAC29989.256ENSMICG00000002428ELAC210088.086Microcebus_murinus
ENSG00000006744ELAC29986.066ENSMOCG00000014060Elac210081.535Microtus_ochrogaster
ENSG00000006744ELAC29757.348ENSMMOG00000020227elac29157.123Mola_mola
ENSG00000006744ELAC210074.016ENSMODG00000008064ELAC29871.270Monodelphis_domestica
ENSG00000006744ELAC29858.771ENSMALG00000020125elac28860.221Monopterus_albus
ENSG00000006744ELAC29887.395MGP_CAROLIEiJ_G0016509Elac210081.796Mus_caroli
ENSG00000006744ELAC29988.430ENSMUSG00000020549Elac210081.993Mus_musculus
ENSG00000006744ELAC29888.235MGP_PahariEiJ_G0017638Elac210081.687Mus_pahari
ENSG00000006744ELAC29988.430MGP_SPRETEiJ_G0017346Elac210081.753Mus_spretus
ENSG00000006744ELAC29985.124ENSMPUG00000003608ELAC210081.588Mustela_putorius_furo
ENSG00000006744ELAC29983.607ENSNGAG00000021585Elac210081.243Nannospalax_galili
ENSG00000006744ELAC27382.759ENSNBRG00000010410elac28872.527Neolamprologus_brichardi
ENSG00000006744ELAC210094.937ENSNLEG00000014599ELAC210094.937Nomascus_leucogenys
ENSG00000006744ELAC28085.714ENSMEUG00000000013ELAC26686.207Notamacropus_eugenii
ENSG00000006744ELAC29186.111ENSOPRG00000011156ELAC29184.688Ochotona_princeps
ENSG00000006744ELAC29985.950ENSODEG00000000449ELAC210082.892Octodon_degus
ENSG00000006744ELAC210060.246ENSONIG00000009569elac29260.261Oreochromis_niloticus
ENSG00000006744ELAC29984.298ENSOCUG00000012703ELAC29482.239Oryctolagus_cuniculus
ENSG00000006744ELAC28073.196ENSORLG00000001024elac28762.204Oryzias_latipes
ENSG00000006744ELAC28074.227ENSORLG00015008761elac28662.204Oryzias_latipes_hsok
ENSG00000006744ELAC29561.376ENSOMEG00000015065elac29361.017Oryzias_melastigma
ENSG00000006744ELAC29988.430ENSOGAG00000012628ELAC210085.135Otolemur_garnettii
ENSG00000006744ELAC29584.483ENSOARG00000015747ELAC29879.481Ovis_aries
ENSG00000006744ELAC2100100.000ENSPPAG00000011633ELAC210099.367Pan_paniscus
ENSG00000006744ELAC29985.124ENSPPRG00000023801ELAC210082.500Panthera_pardus
ENSG00000006744ELAC2100100.000ENSPTRG00000008788ELAC210099.367Pan_troglodytes
ENSG00000006744ELAC210097.581ENSPANG00000023751ELAC210093.766Papio_anubis
ENSG00000006744ELAC210059.091ENSPKIG00000014594elac29357.787Paramormyrops_kingsleyae
ENSG00000006744ELAC27075.676ENSPMGG00000007330elac29055.994Periophthalmus_magnuspinnatus
ENSG00000006744ELAC29886.555ENSPEMG00000001670Elac29981.055Peromyscus_maniculatus_bairdii
ENSG00000006744ELAC210073.770ENSPCIG00000009347ELAC29969.249Phascolarctos_cinereus
ENSG00000006744ELAC29664.706ENSPFOG00000003750elac29359.974Poecilia_formosa
ENSG00000006744ELAC29664.706ENSPLAG00000015167-7163.402Poecilia_latipinna
ENSG00000006744ELAC26761.667ENSPLAG00000015161elac29060.970Poecilia_latipinna
ENSG00000006744ELAC29664.706ENSPMEG00000023756elac28772.656Poecilia_mexicana
ENSG00000006744ELAC29663.866ENSPREG00000003349elac28860.400Poecilia_reticulata
ENSG00000006744ELAC210096.565ENSPPYG00000007997ELAC210096.565Pongo_abelii
ENSG00000006744ELAC210087.579ENSPCOG00000014581ELAC210087.579Propithecus_coquereli
ENSG00000006744ELAC210068.548ENSPVAG00000017570ELAC27984.358Pteropus_vampyrus
ENSG00000006744ELAC210059.055ENSPNYG00000010837elac29257.652Pundamilia_nyererei
ENSG00000006744ELAC210062.698ENSPNAG00000018524elac28961.427Pygocentrus_nattereri
ENSG00000006744ELAC29885.714ENSRNOG00000003424Elac210081.894Rattus_norvegicus
ENSG00000006744ELAC210094.628ENSRBIG00000021596ELAC210094.402Rhinopithecus_bieti
ENSG00000006744ELAC210095.868ENSRROG00000033226ELAC210094.431Rhinopithecus_roxellana
ENSG00000006744ELAC29994.215ENSSBOG00000016993ELAC210089.822Saimiri_boliviensis_boliviensis
ENSG00000006744ELAC29667.521ENSSFOG00015004103elac28958.981Scleropages_formosus
ENSG00000006744ELAC29756.984ENSSMAG00000012868elac29757.531Scophthalmus_maximus
ENSG00000006744ELAC29856.028ENSSDUG00000023129elac28959.383Seriola_dumerili
ENSG00000006744ELAC29856.383ENSSLDG00000005645elac28959.438Seriola_lalandi_dorsalis
ENSG00000006744ELAC29857.042ENSSPAG00000005674elac29260.115Stegastes_partitus
ENSG00000006744ELAC210079.112ENSSSCG00000028465ELAC210079.112Sus_scrofa
ENSG00000006744ELAC210057.377ENSTRUG00000004076elac29359.595Takifugu_rubripes
ENSG00000006744ELAC29958.025ENSTNIG00000011271elac29859.459Tetraodon_nigroviridis
ENSG00000006744ELAC29884.167ENSTTRG00000002898ELAC210076.082Tursiops_truncatus
ENSG00000006744ELAC29985.950ENSUMAG00000021393ELAC28877.745Ursus_maritimus
ENSG00000006744ELAC29985.124ENSVVUG00000029905ELAC210079.857Vulpes_vulpes
ENSG00000006744ELAC28969.912ENSXETG00000012596elac29858.809Xenopus_tropicalis
ENSG00000006744ELAC26759.953ENSXCOG00000004282elac29059.310Xiphophorus_couchianus
ENSG00000006744ELAC29964.744ENSXCOG00000004279-9964.744Xiphophorus_couchianus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0004519endonuclease activity-IEAFunction
GO:0004549tRNA-specific ribonuclease activity12711671.15317868.16361254.18809514.21559454.21593607.EXPFunction
GO:0005634nucleus21593607.IDAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005739mitochondrion21873635.IBAComponent
GO:0005739mitochondrion21593607.IDAComponent
GO:0005759mitochondrial matrix-TASComponent
GO:0042645mitochondrial nucleoid-IEAComponent
GO:0042780tRNA 3'-end processing-TASProcess
GO:0046872metal ion binding-IEAFunction
GO:0072684mitochondrial tRNA 3'-trailer cleavage, endonucleolytic21873635.IBAProcess
GO:0072684mitochondrial tRNA 3'-trailer cleavage, endonucleolytic21593607.IMPProcess
GO:0090646mitochondrial tRNA processing-TASProcess
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